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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0933
GLU 270.0021
PRO 280.0017
CYS 290.0013
VAL 300.0012
GLU 310.0017
VAL 320.0016
VAL 330.0021
PRO 340.0024
ASN 350.0024
ILE 360.0020
THR 370.0015
TYR 380.0012
GLN 390.0007
CYS 400.0008
MET 410.0007
GLU 420.0012
LEU 430.0014
ASN 440.0018
PHE 450.0017
TYR 460.0020
LYS 470.0019
ILE 480.0015
PRO 490.0016
ASP 500.0020
ASN 510.0022
LEU 520.0019
PRO 530.0022
PHE 540.0022
SER 550.0021
THR 560.0016
LYS 570.0015
ASN 580.0011
LEU 590.0007
ASP 600.0005
LEU 610.0007
SER 620.0008
PHE 630.0013
ASN 640.0014
PRO 650.0018
LEU 660.0016
ARG 670.0017
HIS 680.0016
LEU 690.0012
GLY 700.0014
SER 710.0012
TYR 720.0012
SER 730.0012
PHE 740.0010
PHE 750.0014
SER 760.0016
PHE 770.0013
PRO 780.0015
GLU 790.0015
LEU 800.0011
GLN 810.0011
VAL 820.0008
LEU 830.0005
ASP 840.0007
LEU 850.0008
SER 860.0011
ARG 870.0014
CYS 880.0013
GLU 890.0016
ILE 900.0014
GLN 910.0017
THR 920.0015
ILE 930.0011
GLU 940.0011
ASP 950.0009
GLY 960.0007
ALA 970.0008
TYR 980.0005
GLN 990.0006
SER 1000.0009
LEU 1010.0007
SER 1020.0009
HIS 1030.0010
LEU 1040.0007
SER 1050.0010
THR 1060.0009
LEU 1070.0008
ILE 1080.0010
LEU 1090.0011
THR 1100.0014
GLY 1110.0016
ASN 1120.0014
PRO 1130.0017
ILE 1140.0015
GLN 1150.0017
SER 1160.0014
LEU 1170.0012
ALA 1180.0010
LEU 1190.0008
GLY 1200.0006
ALA 1210.0007
PHE 1220.0006
SER 1230.0004
GLY 1240.0004
LEU 1250.0005
SER 1260.0007
SER 1270.0009
LEU 1280.0009
GLN 1290.0011
LYS 1300.0011
LEU 1310.0011
VAL 1320.0014
ALA 1330.0014
VAL 1340.0016
GLU 1350.0017
THR 1360.0015
ASN 1370.0015
LEU 1380.0014
ALA 1390.0013
SER 1400.0011
LEU 1410.0010
GLU 1420.0010
ASN 1430.0010
PHE 1440.0010
PRO 1450.0009
ILE 1460.0009
GLY 1470.0009
HIS 1480.0008
LEU 1490.0008
LYS 1500.0009
THR 1510.0009
LEU 1520.0011
LYS 1530.0012
GLU 1540.0013
LEU 1550.0013
ASN 1560.0014
VAL 1570.0015
ALA 1580.0017
HIS 1590.0018
ASN 1600.0016
LEU 1610.0015
ILE 1620.0011
GLN 1630.0009
SER 1640.0008
PHE 1650.0007
LYS 1660.0007
LEU 1670.0009
PRO 1680.0009
GLU 1690.0009
TYR 1700.0010
PHE 1710.0009
SER 1720.0009
ASN 1730.0009
LEU 1740.0010
THR 1750.0010
ASN 1760.0010
LEU 1770.0011
GLU 1780.0012
HIS 1790.0012
LEU 1800.0012
ASP 1810.0012
LEU 1820.0012
SER 1830.0013
SER 1840.0014
ASN 1850.0013
LYS 1860.0011
ILE 1870.0007
GLN 1880.0005
SER 1890.0002
ILE 1900.0002
TYR 1910.0001
CYS 1920.0001
THR 1930.0002
ASP 1940.0004
LEU 1950.0005
ARG 1960.0005
VAL 1970.0006
LEU 1980.0007
HIS 1990.0006
GLN 2000.0007
MET 2010.0009
PRO 2020.0008
LEU 2030.0010
LEU 2040.0010
ASN 2050.0010
LEU 2060.0009
SER 2070.0010
LEU 2080.0009
ASP 2090.0010
LEU 2100.0008
SER 2110.0009
LEU 2120.0009
ASN 2130.0007
PRO 2140.0006
MET 2150.0003
ASN 2160.0003
PHE 2170.0003
ILE 2180.0003
GLN 2190.0004
PRO 2200.0007
GLY 2210.0007
ALA 2220.0005
PHE 2230.0007
LYS 2240.0008
GLU 2250.0010
ILE 2260.0009
ARG 2270.0009
LEU 2280.0009
HIS 2290.0010
LYS 2300.0009
LEU 2310.0007
THR 2320.0009
LEU 2330.0007
ARG 2340.0007
ASN 2350.0004
ASN 2360.0003
PHE 2370.0002
ASP 2380.0003
SER 2390.0005
LEU 2400.0008
ASN 2410.0009
VAL 2420.0006
MET 2430.0007
LYS 2440.0009
THR 2450.0008
CYS 2460.0006
ILE 2470.0009
GLN 2480.0010
GLY 2490.0008
LEU 2500.0009
ALA 2510.0011
GLY 2520.0011
LEU 2530.0010
GLU 2540.0011
VAL 2550.0011
HIS 2560.0012
ARG 2570.0011
LEU 2580.0010
VAL 2590.0010
LEU 2600.0010
GLY 2610.0010
GLU 2620.0008
PHE 2630.0008
ARG 2640.0006
ASN 2650.0007
GLU 2660.0006
GLY 2670.0004
ASN 2680.0004
LEU 2690.0005
GLU 2700.0007
LYS 2710.0010
PHE 2720.0012
ASP 2730.0014
LYS 2740.0015
SER 2750.0014
ALA 2760.0013
LEU 2770.0013
GLU 2780.0014
GLY 2790.0013
LEU 2800.0013
CYS 2810.0015
ASN 2820.0014
LEU 2830.0014
THR 2840.0014
ILE 2850.0014
GLU 2860.0014
GLU 2870.0013
PHE 2880.0013
ARG 2890.0013
LEU 2900.0013
ALA 2910.0013
TYR 2920.0013
LEU 2930.0013
ASP 2940.0013
TYR 2950.0013
TYR 2960.0016
LEU 2970.0016
ASP 2980.0016
GLY 2990.0016
ILE 3000.0015
ILE 3010.0015
ASP 3020.0016
LEU 3030.0015
PHE 3040.0015
ASN 3050.0016
CYS 3060.0015
LEU 3070.0016
THR 3080.0015
ASN 3090.0015
VAL 3100.0016
SER 3110.0016
SER 3120.0015
PHE 3130.0015
SER 3140.0015
LEU 3150.0015
VAL 3160.0015
SER 3170.0015
VAL 3180.0015
THR 3190.0016
ILE 3200.0015
GLU 3210.0016
ARG 3220.0015
VAL 3230.0014
LYS 3240.0013
ASP 3250.0013
PHE 3260.0013
SER 3270.0012
TYR 3280.0012
ASN 3290.0012
PHE 3300.0014
GLY 3310.0014
TRP 3320.0014
GLN 3330.0014
HIS 3340.0014
LEU 3350.0014
GLU 3360.0014
LEU 3370.0014
VAL 3380.0016
ASN 3390.0017
CYS 3400.0016
LYS 3410.0016
PHE 3420.0016
GLY 3430.0015
GLN 3440.0013
PHE 3450.0013
PRO 3460.0014
THR 3470.0011
LEU 3480.0012
LYS 3490.0010
LEU 3500.0011
LYS 3510.0011
SER 3520.0013
LEU 3530.0013
LYS 3540.0015
ARG 3550.0015
LEU 3560.0014
THR 3570.0016
PHE 3580.0015
THR 3590.0016
SER 3600.0017
ASN 3610.0016
LYS 3620.0016
GLY 3630.0015
GLY 3640.0014
ASN 3650.0013
ALA 3660.0011
PHE 3670.0013
SER 3680.0012
GLU 3690.0010
VAL 3700.0011
ASP 3710.0010
LEU 3720.0010
PRO 3730.0011
SER 3740.0014
LEU 3750.0014
GLU 3760.0017
PHE 3770.0016
LEU 3780.0016
ASP 3790.0016
LEU 3800.0016
SER 3810.0017
ARG 3820.0017
ASN 3830.0016
GLY 3840.0014
LEU 3850.0013
SER 3860.0011
PHE 3870.0015
LYS 3880.0015
GLY 3890.0014
CYS 3900.0015
CYS 3910.0015
SER 3920.0013
GLN 3930.0012
SER 3940.0012
ASP 3950.0013
PHE 3960.0013
GLY 3970.0010
THR 3980.0012
ILE 3990.0014
SER 4000.0016
LEU 4010.0015
LYS 4020.0017
TYR 4030.0017
LEU 4040.0016
ASP 4050.0017
LEU 4060.0017
SER 4070.0016
PHE 4080.0015
ASN 4090.0016
GLY 4100.0015
VAL 4110.0015
ILE 4120.0017
THR 4130.0018
MET 4140.0017
SER 4150.0018
SER 4160.0017
ASN 4170.0018
PHE 4180.0016
LEU 4190.0015
GLY 4200.0014
LEU 4210.0014
GLU 4220.0016
GLN 4230.0016
LEU 4240.0017
GLU 4250.0018
HIS 4260.0018
LEU 4270.0018
ASP 4280.0017
PHE 4290.0016
GLN 4300.0015
HIS 4310.0015
SER 4320.0017
ASN 4330.0018
LEU 4340.0019
LYS 4350.0020
GLN 4360.0021
MET 4370.0022
SER 4380.0023
GLU 4390.0023
PHE 4400.0022
SER 4410.0021
VAL 4420.0020
PHE 4430.0020
LEU 4440.0019
SER 4450.0018
LEU 4460.0018
ARG 4470.0019
ASN 4480.0018
LEU 4490.0019
ILE 4500.0019
TYR 4510.0020
LEU 4520.0019
ASP 4530.0018
ILE 4540.0019
SER 4550.0017
HIS 4560.0017
THR 4570.0020
HIS 4580.0022
THR 4590.0022
ARG 4600.0024
VAL 4610.0024
ALA 4620.0027
PHE 4630.0026
ASN 4640.0026
GLY 4650.0025
ILE 4660.0024
PHE 4670.0024
ASN 4680.0023
GLY 4690.0022
LEU 4700.0022
SER 4710.0022
SER 4720.0021
LEU 4730.0021
GLU 4740.0021
VAL 4750.0021
LEU 4760.0022
LYS 4770.0020
MET 4780.0021
ALA 4790.0020
GLY 4800.0021
ASN 4810.0021
SER 4820.0026
PHE 4830.0027
GLN 4840.0028
GLU 4850.0029
ASN 4860.0027
PHE 4870.0027
LEU 4880.0026
PRO 4890.0028
ASP 4900.0027
ILE 4910.0027
PHE 4920.0026
THR 4930.0026
GLU 4940.0025
LEU 4950.0024
ARG 4960.0024
ASN 4970.0023
LEU 4980.0023
THR 4990.0022
PHE 5000.0022
LEU 5010.0023
ASP 5020.0021
LEU 5030.0021
SER 5040.0020
GLN 5050.0021
CYS 5060.0023
GLN 5070.0025
LEU 5080.0025
GLU 5090.0024
GLN 5100.0025
LEU 5110.0025
SER 5120.0027
PRO 5130.0026
THR 5140.0027
ALA 5150.0027
PHE 5160.0026
ASN 5170.0026
SER 5180.0027
LEU 5190.0025
SER 5200.0024
SER 5210.0024
LEU 5220.0024
GLN 5230.0022
VAL 5240.0022
LEU 5250.0022
ASN 5260.0022
MET 5270.0021
SER 5280.0020
HIS 5290.0021
ASN 5300.0022
ASN 5310.0021
PHE 5320.0019
PHE 5330.0016
SER 5340.0015
LEU 5350.0015
ASP 5360.0018
THR 5370.0018
PHE 5380.0021
PRO 5390.0024
TYR 5400.0023
LYS 5410.0024
CYS 5420.0024
LEU 5430.0024
ASN 5440.0023
SER 5450.0023
LEU 5460.0022
GLN 5470.0021
VAL 5480.0020
LEU 5490.0020
ASP 5500.0019
TYR 5510.0018
SER 5520.0017
LEU 5530.0020
ASN 5540.0019
HIS 5550.0017
ILE 5560.0013
MET 5570.0009
THR 5580.0007
SER 5590.0010
LYS 5600.0012
LYS 5610.0016
GLN 5620.0015
GLU 5630.0018
LEU 5640.0014
GLN 5650.0017
HIS 5660.0020
PHE 5670.0019
PRO 5680.0021
SER 5690.0020
SER 5700.0021
LEU 5710.0019
ALA 5720.0018
PHE 5730.0017
LEU 5740.0015
ASN 5750.0015
LEU 5760.0013
THR 5770.0014
GLN 5780.0018
ASN 5790.0015
ASP 5800.0015
PHE 5810.0010
ALA 5820.0012
CYS 5830.0016
THR 5840.0018
CYS 5850.0020
GLU 5860.0013
HIS 5870.0008
GLN 5880.0014
SER 5890.0014
PHE 5900.0008
LEU 5910.0008
GLN 5920.0013
TRP 5930.0011
ILE 5940.0005
LYS 5950.0010
ASP 5960.0015
GLN 5970.0011
ARG 5980.0006
GLN 5990.0010
LEU 6000.0013
LEU 6010.0009
VAL 6020.0011
GLU 6030.0011
VAL 6040.0007
GLU 6050.0013
ARG 6060.0016
MET 6070.0012
GLU 6080.0018
CYS 6090.0018
ALA 6100.0023
THR 6110.0023
PRO 6120.0028
SER 6130.0037
ASP 6140.0040
LYS 6150.0031
GLN 6160.0031
GLY 6170.0029
MET 6180.0025
PRO 6190.0018
VAL 6200.0012
LEU 6210.0012
SER 6220.0021
LEU 6230.0023
ASN 6240.0029
ILE 6250.0027
THR 6260.0035
CYS 6270.0043
GLU 10.0119
ALA 20.0097
ALA 30.0117
ALA 40.0116
LYS 50.0075
MET 60.0066
GLN 70.0091
ARG 80.0098
LEU 90.0076
VAL 100.0074
LEU 110.0095
LEU 120.0101
LEU 130.0089
ALA 140.0095
ILE 150.0119
SER 160.0107
LEU 170.0097
LEU 180.0089
LEU 190.0094
TYR 200.0094
GLN 210.0070
ASP 220.0060
LEU 230.0059
PRO 240.0056
VAL 250.0068
ARG 260.0052
SER 270.0039
GLU 280.0049
PHE 290.0049
GLU 300.0035
LEU 310.0020
ASP 320.0019
ARG 330.0018
ILE 340.0014
CYS 350.0010
GLY 360.0013
TYR 370.0016
GLY 380.0013
THR 390.0011
ALA 400.0009
ARG 410.0005
CYS 420.0009
ARG 430.0011
LYS 440.0017
LYS 450.0016
CYS 460.0014
ARG 470.0014
SER 480.0015
GLN 490.0013
GLU 500.0012
TYR 510.0013
ARG 520.0013
ILE 530.0009
GLY 540.0013
ARG 550.0016
CYS 560.0015
PRO 570.0021
ASN 580.0019
THR 590.0020
TYR 600.0014
ALA 610.0014
CYS 620.0010
CYS 630.0010
LEU 640.0007
ARG 650.0009
LYS 660.0019
TRP 670.0021
ASP 680.0020
GLU 690.0019
SER 700.0020
LEU 710.0024
LEU 720.0028
ASN 730.0027
ARG 740.0022
THR 750.0024
LYS 760.0049
PRO 770.0050
GLU 780.0046
ALA 790.0055
ALA 800.0058
ALA 810.0213
LYS 820.0221
LYS 830.0213
GLU 840.0234
MET 850.0226
ASN 860.0208
LEU 870.0142
SER 880.0143
VAL 890.0096
GLY 900.0143
LEU 910.0153
GLY 920.0232
GLY 930.0280
GLY 940.0283
SER 950.0209
ASN 960.0181
LEU 970.0132
SER 980.0175
VAL 990.0169
GLY 1000.0234
LEU 1010.0190
GLY 1020.0204
GLU 1030.0252
ILE 1040.0259
GLY 1050.0311
GLY 1060.0376
GLY 1070.0304
SER 1080.0242
LYS 1090.0180
LEU 1100.0133
LEU 1110.0129
ASP 1120.0126
ILE 1130.0088
ASN 1140.0105
LEU 1150.0101
GLY 1160.0099
ARG 1170.0152
GLY 1180.0133
GLY 1190.0228
GLY 1200.0285
SER 1210.0191
MET 1220.0175
VAL 1230.0113
ASP 1240.0107
LEU 1250.0059
THR 1260.0072
PHE 1270.0075
GLY 1280.0104
GLY 1290.0097
VAL 1300.0119
GLY 1310.0095
GLY 1320.0103
GLY 1330.0097
SER 1340.0100
THR 1350.0094
PHE 1360.0082
THR 1370.0111
PHE 1380.0096
PHE 1390.0131
PRO 1400.0121
LEU 1410.0118
VAL 1420.0134
ILE 1430.0146
GLY 1440.0163
GLY 1450.0182
GLY 1460.0220
SER 1470.0188
ASP 1480.0156
ALA 1490.0134
MET 1500.0110
TYR 1510.0084
LEU 1520.0085
GLY 1530.0110
PHE 1540.0113
ALA 1550.0136
ALA 1560.0124
GLY 1570.0112
GLY 1580.0091
GLY 1590.0093
SER 1600.0089
ALA 1610.0106
GLY 1620.0086
GLY 1630.0063
GLU 1640.0066
ASN 1650.0049
HIS 1660.0063
VAL 1670.0069
ALA 1680.0115
PHE 1690.0139
GLY 1700.0190
PRO 1710.0310
GLY 1720.0288
PRO 1730.0278
GLY 1740.0201
VAL 1750.0152
ASP 1760.0109
LEU 1770.0083
THR 1780.0066
PHE 1790.0057
GLY 1800.0059
GLY 1810.0065
VAL 1820.0064
GLN 1830.0064
PHE 1840.0081
ALA 1850.0100
MET 1860.0133
VAL 1870.0160
ASN 1880.0236
ASN 1890.0333
GLY 1900.0394
PRO 1910.0318
GLY 1920.0173
PRO 1930.0488
GLY 1940.0574
GLU 1950.0281
SER 1960.0192
PHE 1970.0305
THR 1980.0350
ALA 1990.0497
GLN 2000.0569
PRO 2010.0353
ALA 2020.0190
ASP 2030.0366
MET 2040.0472
GLN 2050.0486
ALA 2060.0791
GLY 2070.0589
ILE 2080.0323
LYS 2090.0268
GLY 2100.0370
PRO 2110.0701
GLY 2120.0503
PRO 2130.0382
GLY 2140.0586
GLY 2150.0374
SER 2160.0721
ILE 2170.0361
GLN 2180.0476
VAL 2190.0248
ILE 2200.0933
ASN 2210.0731
GLY 2220.0543
SER 2230.0407
THR 2240.0295
ILE 2250.0202
GLY 2260.0399
THR 2270.0452
GLY 2280.0402
SER 2290.0358
LYS 2300.0253
LYS 2310.0269
THR 2320.0222
ILE 2330.0166
LEU 2340.0125
ILE 2350.0117
TYR 2360.0089
SER 2370.0087
ILE 2380.0072
ILE 2390.0064
GLY 2400.0056
VAL 2410.0018
LYS 2420.0011
LYS 2430.0016
GLY 2440.0021
THR 2450.0016
LEU 2460.0060
ALA 2470.0060
TRP 2480.0061
ALA 2490.0061
ARG 2500.0066
THR 2510.0104
GLY 2520.0087
PHE 2530.0123
SER 2540.0147
PRO 2550.0126
ALA 2560.0177
LYS 2570.0234
LYS 2580.0264
LEU 2590.0232
ASN 2600.0271
ALA 2610.0297
GLY 2620.0245
VAL 2630.0208
VAL 2640.0213
ARG 2650.0144
VAL 2660.0157
PHE 2670.0136
PHE 2680.0121
LEU 2690.0095
ASN 2700.0093
GLN 2710.0042
LYS 2720.0027
LYS 2730.0029
ALA 2740.0035
LYS 2750.0028
ASP 2760.0022
VAL 2770.0042
LEU 2780.0037
ARG 2790.0037
LYS 2800.0057
THR 2810.0082
SER 2820.0063
ARG 2830.0062
PRO 2840.0063
MET 2850.0090
VAL 2860.0078
ASP 2870.0102
LEU 2880.0111
THR 2890.0104
PHE 2900.0087
GLY 2910.0140
GLY 2920.0090

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.