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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 44  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0986
GLU 270.0037
PRO 280.0043
CYS 290.0033
VAL 300.0036
GLU 310.0029
VAL 320.0034
VAL 330.0028
PRO 340.0019
ASN 350.0009
ILE 360.0016
THR 370.0019
TYR 380.0019
GLN 390.0026
CYS 400.0025
MET 410.0030
GLU 420.0037
LEU 430.0040
ASN 440.0040
PHE 450.0032
TYR 460.0035
LYS 470.0028
ILE 480.0021
PRO 490.0023
ASP 500.0028
ASN 510.0028
LEU 520.0017
PRO 530.0013
PHE 540.0019
SER 550.0016
THR 560.0010
LYS 570.0018
ASN 580.0018
LEU 590.0010
ASP 600.0016
LEU 610.0014
SER 620.0020
PHE 630.0026
ASN 640.0025
PRO 650.0026
LEU 660.0019
ARG 670.0016
HIS 680.0017
LEU 690.0016
GLY 700.0024
SER 710.0027
TYR 720.0028
SER 730.0022
PHE 740.0019
PHE 750.0028
SER 760.0024
PHE 770.0019
PRO 780.0028
GLU 790.0025
LEU 800.0019
GLN 810.0025
VAL 820.0020
LEU 830.0013
ASP 840.0014
LEU 850.0009
SER 860.0016
ARG 870.0016
CYS 880.0012
GLU 890.0013
ILE 900.0008
GLN 910.0009
THR 920.0013
ILE 930.0014
GLU 940.0021
ASP 950.0025
GLY 960.0026
ALA 970.0021
TYR 980.0021
GLN 990.0029
SER 1000.0029
LEU 1010.0025
SER 1020.0032
HIS 1030.0031
LEU 1040.0025
SER 1050.0028
THR 1060.0023
LEU 1070.0019
ILE 1080.0017
LEU 1090.0013
THR 1100.0016
GLY 1110.0014
ASN 1120.0008
PRO 1130.0007
ILE 1140.0006
GLN 1150.0007
SER 1160.0013
LEU 1170.0012
ALA 1180.0017
LEU 1190.0022
GLY 1200.0023
ALA 1210.0018
PHE 1220.0021
SER 1230.0027
GLY 1240.0029
LEU 1250.0026
SER 1260.0033
SER 1270.0030
LEU 1280.0026
GLN 1290.0028
LYS 1300.0024
LEU 1310.0020
VAL 1320.0020
ALA 1330.0018
VAL 1340.0019
GLU 1350.0017
THR 1360.0016
ASN 1370.0015
LEU 1380.0016
ALA 1390.0016
SER 1400.0017
LEU 1410.0018
GLU 1420.0017
ASN 1430.0016
PHE 1440.0017
PRO 1450.0019
ILE 1460.0021
GLY 1470.0021
HIS 1480.0023
LEU 1490.0024
LYS 1500.0025
THR 1510.0027
LEU 1520.0022
LYS 1530.0023
GLU 1540.0022
LEU 1550.0020
ASN 1560.0019
VAL 1570.0020
ALA 1580.0020
HIS 1590.0019
ASN 1600.0019
LEU 1610.0018
ILE 1620.0017
GLN 1630.0017
SER 1640.0016
PHE 1650.0016
LYS 1660.0016
LEU 1670.0016
PRO 1680.0016
GLU 1690.0016
TYR 1700.0017
PHE 1710.0017
SER 1720.0017
ASN 1730.0018
LEU 1740.0019
THR 1750.0021
ASN 1760.0022
LEU 1770.0018
GLU 1780.0019
HIS 1790.0018
LEU 1800.0017
ASP 1810.0017
LEU 1820.0016
SER 1830.0016
SER 1840.0017
ASN 1850.0017
LYS 1860.0017
ILE 1870.0015
GLN 1880.0015
SER 1890.0014
ILE 1900.0014
TYR 1910.0014
CYS 1920.0015
THR 1930.0015
ASP 1940.0015
LEU 1950.0014
ARG 1960.0015
VAL 1970.0014
LEU 1980.0014
HIS 1990.0014
GLN 2000.0014
MET 2010.0014
PRO 2020.0013
LEU 2030.0013
LEU 2040.0013
ASN 2050.0012
LEU 2060.0013
SER 2070.0012
LEU 2080.0012
ASP 2090.0012
LEU 2100.0012
SER 2110.0012
LEU 2120.0013
ASN 2130.0014
PRO 2140.0014
MET 2150.0013
ASN 2160.0013
PHE 2170.0012
ILE 2180.0011
GLN 2190.0012
PRO 2200.0011
GLY 2210.0011
ALA 2220.0012
PHE 2230.0011
LYS 2240.0012
GLU 2250.0012
ILE 2260.0011
ARG 2270.0009
LEU 2280.0009
HIS 2290.0009
LYS 2300.0009
LEU 2310.0009
THR 2320.0008
LEU 2330.0008
ARG 2340.0008
ASN 2350.0010
ASN 2360.0010
PHE 2370.0012
ASP 2380.0015
SER 2390.0015
LEU 2400.0013
ASN 2410.0013
VAL 2420.0013
MET 2430.0011
LYS 2440.0010
THR 2450.0010
CYS 2460.0009
ILE 2470.0009
GLN 2480.0009
GLY 2490.0009
LEU 2500.0009
ALA 2510.0008
GLY 2520.0009
LEU 2530.0008
GLU 2540.0009
VAL 2550.0008
HIS 2560.0010
ARG 2570.0010
LEU 2580.0010
VAL 2590.0009
LEU 2600.0009
GLY 2610.0009
GLU 2620.0006
PHE 2630.0009
ARG 2640.0013
ASN 2650.0015
GLU 2660.0013
GLY 2670.0013
ASN 2680.0012
LEU 2690.0012
GLU 2700.0015
LYS 2710.0015
PHE 2720.0014
ASP 2730.0014
LYS 2740.0013
SER 2750.0012
ALA 2760.0012
LEU 2770.0011
GLU 2780.0011
GLY 2790.0010
LEU 2800.0010
CYS 2810.0010
ASN 2820.0008
LEU 2830.0008
THR 2840.0010
ILE 2850.0010
GLU 2860.0012
GLU 2870.0012
PHE 2880.0012
ARG 2890.0012
LEU 2900.0012
ALA 2910.0012
TYR 2920.0016
LEU 2930.0015
ASP 2940.0014
TYR 2950.0013
TYR 2960.0012
LEU 2970.0015
ASP 2980.0014
GLY 2990.0014
ILE 3000.0015
ILE 3010.0014
ASP 3020.0015
LEU 3030.0015
PHE 3040.0014
ASN 3050.0014
CYS 3060.0013
LEU 3070.0014
THR 3080.0015
ASN 3090.0014
VAL 3100.0013
SER 3110.0013
SER 3120.0014
PHE 3130.0014
SER 3140.0014
LEU 3150.0014
VAL 3160.0014
SER 3170.0015
VAL 3180.0014
THR 3190.0014
ILE 3200.0014
GLU 3210.0015
ARG 3220.0016
VAL 3230.0016
LYS 3240.0016
ASP 3250.0016
PHE 3260.0016
SER 3270.0017
TYR 3280.0017
ASN 3290.0016
PHE 3300.0016
GLY 3310.0015
TRP 3320.0015
GLN 3330.0014
HIS 3340.0014
LEU 3350.0014
GLU 3360.0014
LEU 3370.0015
VAL 3380.0016
ASN 3390.0016
CYS 3400.0015
LYS 3410.0014
PHE 3420.0016
GLY 3430.0016
GLN 3440.0016
PHE 3450.0015
PRO 3460.0016
THR 3470.0016
LEU 3480.0015
LYS 3490.0016
LEU 3500.0016
LYS 3510.0016
SER 3520.0015
LEU 3530.0014
LYS 3540.0013
ARG 3550.0013
LEU 3560.0013
THR 3570.0013
PHE 3580.0013
THR 3590.0013
SER 3600.0013
ASN 3610.0013
LYS 3620.0017
GLY 3630.0020
GLY 3640.0020
ASN 3650.0016
ALA 3660.0014
PHE 3670.0012
SER 3680.0012
GLU 3690.0012
VAL 3700.0013
ASP 3710.0014
LEU 3720.0014
PRO 3730.0014
SER 3740.0014
LEU 3750.0012
GLU 3760.0011
PHE 3770.0010
LEU 3780.0010
ASP 3790.0010
LEU 3800.0010
SER 3810.0009
ARG 3820.0009
ASN 3830.0010
GLY 3840.0009
LEU 3850.0009
SER 3860.0008
PHE 3870.0007
LYS 3880.0006
GLY 3890.0005
CYS 3900.0004
CYS 3910.0004
SER 3920.0007
GLN 3930.0009
SER 3940.0010
ASP 3950.0010
PHE 3960.0011
GLY 3970.0013
THR 3980.0012
ILE 3990.0012
SER 4000.0011
LEU 4010.0010
LYS 4020.0009
TYR 4030.0008
LEU 4040.0007
ASP 4050.0006
LEU 4060.0006
SER 4070.0004
PHE 4080.0005
ASN 4090.0006
GLY 4100.0007
VAL 4110.0007
ILE 4120.0005
THR 4130.0005
MET 4140.0003
SER 4150.0003
SER 4160.0002
ASN 4170.0003
PHE 4180.0004
LEU 4190.0006
GLY 4200.0008
LEU 4210.0008
GLU 4220.0008
GLN 4230.0009
LEU 4240.0007
GLU 4250.0007
HIS 4260.0006
LEU 4270.0004
ASP 4280.0003
PHE 4290.0002
GLN 4300.0002
HIS 4310.0003
SER 4320.0004
ASN 4330.0005
LEU 4340.0004
LYS 4350.0006
GLN 4360.0006
MET 4370.0005
SER 4380.0007
GLU 4390.0007
PHE 4400.0006
SER 4410.0006
VAL 4420.0004
PHE 4430.0005
LEU 4440.0006
SER 4450.0007
LEU 4460.0007
ARG 4470.0009
ASN 4480.0009
LEU 4490.0007
ILE 4500.0007
TYR 4510.0006
LEU 4520.0005
ASP 4530.0004
ILE 4540.0004
SER 4550.0004
HIS 4560.0004
THR 4570.0004
HIS 4580.0005
THR 4590.0005
ARG 4600.0007
VAL 4610.0007
ALA 4620.0009
PHE 4630.0009
ASN 4640.0010
GLY 4650.0009
ILE 4660.0007
PHE 4670.0008
ASN 4680.0009
GLY 4690.0008
LEU 4700.0008
SER 4710.0010
SER 4720.0009
LEU 4730.0008
GLU 4740.0008
VAL 4750.0008
LEU 4760.0008
LYS 4770.0007
MET 4780.0007
ALA 4790.0007
GLY 4800.0006
ASN 4810.0007
SER 4820.0007
PHE 4830.0008
GLN 4840.0009
GLU 4850.0009
ASN 4860.0008
PHE 4870.0009
LEU 4880.0009
PRO 4890.0009
ASP 4900.0009
ILE 4910.0009
PHE 4920.0009
THR 4930.0010
GLU 4940.0010
LEU 4950.0009
ARG 4960.0009
ASN 4970.0009
LEU 4980.0009
THR 4990.0009
PHE 5000.0009
LEU 5010.0009
ASP 5020.0009
LEU 5030.0009
SER 5040.0009
GLN 5050.0009
CYS 5060.0009
GLN 5070.0009
LEU 5080.0009
GLU 5090.0009
GLN 5100.0008
LEU 5110.0008
SER 5120.0008
PRO 5130.0007
THR 5140.0007
ALA 5150.0008
PHE 5160.0008
ASN 5170.0007
SER 5180.0008
LEU 5190.0008
SER 5200.0008
SER 5210.0009
LEU 5220.0010
GLN 5230.0011
VAL 5240.0011
LEU 5250.0010
ASN 5260.0010
MET 5270.0010
SER 5280.0011
HIS 5290.0012
ASN 5300.0011
ASN 5310.0010
PHE 5320.0010
PHE 5330.0009
SER 5340.0006
LEU 5350.0004
ASP 5360.0002
THR 5370.0003
PHE 5380.0003
PRO 5390.0004
TYR 5400.0006
LYS 5410.0006
CYS 5420.0006
LEU 5430.0008
ASN 5440.0009
SER 5450.0010
LEU 5460.0010
GLN 5470.0014
VAL 5480.0013
LEU 5490.0011
ASP 5500.0012
TYR 5510.0010
SER 5520.0012
LEU 5530.0014
ASN 5540.0012
HIS 5550.0012
ILE 5560.0008
MET 5570.0009
THR 5580.0008
SER 5590.0006
LYS 5600.0010
LYS 5610.0009
GLN 5620.0009
GLU 5630.0007
LEU 5640.0006
GLN 5650.0009
HIS 5660.0008
PHE 5670.0008
PRO 5680.0010
SER 5690.0013
SER 5700.0014
LEU 5710.0013
ALA 5720.0018
PHE 5730.0016
LEU 5740.0012
ASN 5750.0012
LEU 5760.0009
THR 5770.0012
GLN 5780.0015
ASN 5790.0012
ASP 5800.0013
PHE 5810.0009
ALA 5820.0016
CYS 5830.0015
THR 5840.0021
CYS 5850.0025
GLU 5860.0025
HIS 5870.0017
GLN 5880.0018
SER 5890.0017
PHE 5900.0010
LEU 5910.0009
GLN 5920.0014
TRP 5930.0012
ILE 5940.0008
LYS 5950.0012
ASP 5960.0017
GLN 5970.0015
ARG 5980.0014
GLN 5990.0019
LEU 6000.0017
LEU 6010.0013
VAL 6020.0017
GLU 6030.0017
VAL 6040.0012
GLU 6050.0012
ARG 6060.0014
MET 6070.0009
GLU 6080.0010
CYS 6090.0012
ALA 6100.0018
THR 6110.0022
PRO 6120.0025
SER 6130.0028
ASP 6140.0026
LYS 6150.0018
GLN 6160.0020
GLY 6170.0016
MET 6180.0009
PRO 6190.0005
VAL 6200.0003
LEU 6210.0006
SER 6220.0005
LEU 6230.0010
ASN 6240.0018
ILE 6250.0022
THR 6260.0030
CYS 6270.0038
GLU 10.0035
ALA 20.0024
ALA 30.0025
ALA 40.0016
LYS 50.0007
MET 60.0011
GLN 70.0009
ARG 80.0011
LEU 90.0020
VAL 100.0026
LEU 110.0023
LEU 120.0028
LEU 130.0032
ALA 140.0029
ILE 150.0030
SER 160.0029
LEU 170.0026
LEU 180.0024
LEU 190.0023
TYR 200.0021
GLN 210.0016
ASP 220.0015
LEU 230.0015
PRO 240.0015
VAL 250.0014
ARG 260.0013
SER 270.0012
GLU 280.0011
PHE 290.0010
GLU 300.0010
LEU 310.0011
ASP 320.0010
ARG 330.0008
ILE 340.0009
CYS 350.0009
GLY 360.0009
TYR 370.0011
GLY 380.0011
THR 390.0011
ALA 400.0009
ARG 410.0007
CYS 420.0005
ARG 430.0005
LYS 440.0008
LYS 450.0010
CYS 460.0011
ARG 470.0015
SER 480.0020
GLN 490.0020
GLU 500.0016
TYR 510.0015
ARG 520.0010
ILE 530.0012
GLY 540.0009
ARG 550.0008
CYS 560.0009
PRO 570.0014
ASN 580.0013
THR 590.0010
TYR 600.0007
ALA 610.0004
CYS 620.0005
CYS 630.0008
LEU 640.0012
ARG 650.0015
LYS 660.0021
TRP 670.0020
ASP 680.0019
GLU 690.0020
SER 700.0019
LEU 710.0017
LEU 720.0019
ASN 730.0019
ARG 740.0017
THR 750.0018
LYS 760.0030
PRO 770.0036
GLU 780.0036
ALA 790.0039
ALA 800.0046
ALA 810.0166
LYS 820.0113
LYS 830.0148
GLU 840.0114
MET 850.0128
ASN 860.0129
LEU 870.0095
SER 880.0105
VAL 890.0083
GLY 900.0091
LEU 910.0100
GLY 920.0095
GLY 930.0157
GLY 940.0198
SER 950.0195
ASN 960.0165
LEU 970.0138
SER 980.0136
VAL 990.0102
GLY 1000.0111
LEU 1010.0061
GLY 1020.0160
GLU 1030.0303
ILE 1040.0472
GLY 1050.0644
GLY 1060.0867
GLY 1070.0638
SER 1080.0458
LYS 1090.0230
LEU 1100.0075
LEU 1110.0130
ASP 1120.0158
ILE 1130.0168
ASN 1140.0243
LEU 1150.0248
GLY 1160.0387
ARG 1170.0469
GLY 1180.0386
GLY 1190.0346
GLY 1200.0251
SER 1210.0135
MET 1220.0101
VAL 1230.0068
ASP 1240.0035
LEU 1250.0031
THR 1260.0051
PHE 1270.0075
GLY 1280.0091
GLY 1290.0095
VAL 1300.0126
GLY 1310.0147
GLY 1320.0158
GLY 1330.0158
SER 1340.0166
THR 1350.0167
PHE 1360.0173
THR 1370.0175
PHE 1380.0140
PHE 1390.0154
PRO 1400.0139
LEU 1410.0170
VAL 1420.0228
ILE 1430.0207
GLY 1440.0272
GLY 1450.0313
GLY 1460.0283
SER 1470.0227
ASP 1480.0239
ALA 1490.0150
MET 1500.0114
TYR 1510.0031
LEU 1520.0057
GLY 1530.0117
PHE 1540.0156
ALA 1550.0217
ALA 1560.0212
GLY 1570.0182
GLY 1580.0137
GLY 1590.0132
SER 1600.0118
ALA 1610.0157
GLY 1620.0113
GLY 1630.0071
GLU 1640.0049
ASN 1650.0062
HIS 1660.0042
VAL 1670.0034
ALA 1680.0050
PHE 1690.0054
GLY 1700.0088
PRO 1710.0360
GLY 1720.0302
PRO 1730.0199
GLY 1740.0098
VAL 1750.0051
ASP 1760.0133
LEU 1770.0134
THR 1780.0141
PHE 1790.0162
GLY 1800.0175
GLY 1810.0265
VAL 1820.0330
GLN 1830.0317
PHE 1840.0341
ALA 1850.0371
MET 1860.0372
VAL 1870.0447
ASN 1880.0399
ASN 1890.0740
GLY 1900.0814
PRO 1910.0986
GLY 1920.0360
PRO 1930.0641
GLY 1940.0846
GLU 1950.0295
SER 1960.0598
PHE 1970.0540
THR 1980.0466
ALA 1990.0389
GLN 2000.0338
PRO 2010.0138
ALA 2020.0129
ASP 2030.0079
MET 2040.0360
GLN 2050.0469
ALA 2060.0528
GLY 2070.0237
ILE 2080.0298
LYS 2090.0167
GLY 2100.0559
PRO 2110.0485
GLY 2120.0321
PRO 2130.0564
GLY 2140.0241
GLY 2150.0357
SER 2160.0534
ILE 2170.0443
GLN 2180.0276
VAL 2190.0201
ILE 2200.0221
ASN 2210.0190
GLY 2220.0184
SER 2230.0192
THR 2240.0183
ILE 2250.0214
GLY 2260.0244
THR 2270.0246
GLY 2280.0207
SER 2290.0174
LYS 2300.0142
LYS 2310.0172
THR 2320.0158
ILE 2330.0166
LEU 2340.0164
ILE 2350.0173
TYR 2360.0150
SER 2370.0135
ILE 2380.0117
ILE 2390.0091
GLY 2400.0082
VAL 2410.0046
LYS 2420.0029
LYS 2430.0020
GLY 2440.0023
THR 2450.0035
LEU 2460.0075
ALA 2470.0075
TRP 2480.0097
ALA 2490.0097
ARG 2500.0120
THR 2510.0124
GLY 2520.0080
PHE 2530.0067
SER 2540.0024
PRO 2550.0025
ALA 2560.0067
LYS 2570.0098
LYS 2580.0119
LEU 2590.0124
ASN 2600.0156
ALA 2610.0196
GLY 2620.0135
VAL 2630.0126
VAL 2640.0098
ARG 2650.0112
VAL 2660.0111
PHE 2670.0099
PHE 2680.0053
LEU 2690.0049
ASN 2700.0043
GLN 2710.0011
LYS 2720.0008
LYS 2730.0008
ALA 2740.0012
LYS 2750.0016
ASP 2760.0013
VAL 2770.0016
LEU 2780.0008
ARG 2790.0009
LYS 2800.0017
THR 2810.0027
SER 2820.0043
ARG 2830.0025
PRO 2840.0051
MET 2850.0062
VAL 2860.0036
ASP 2870.0040
LEU 2880.0036
THR 2890.0033
PHE 2900.0006
GLY 2910.0018
GLY 2920.0012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.