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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0584
GLU 270.0112
PRO 280.0117
CYS 290.0101
VAL 300.0121
GLU 310.0130
VAL 320.0137
VAL 330.0143
PRO 340.0139
ASN 350.0114
ILE 360.0111
THR 370.0104
TYR 380.0091
GLN 390.0087
CYS 400.0069
MET 410.0063
GLU 420.0064
LEU 430.0077
ASN 440.0071
PHE 450.0057
TYR 460.0059
LYS 470.0044
ILE 480.0027
PRO 490.0047
ASP 500.0048
ASN 510.0071
LEU 520.0068
PRO 530.0073
PHE 540.0055
SER 550.0078
THR 560.0074
LYS 570.0082
ASN 580.0079
LEU 590.0057
ASP 600.0054
LEU 610.0032
SER 620.0031
PHE 630.0027
ASN 640.0030
PRO 650.0036
LEU 660.0028
ARG 670.0037
HIS 680.0039
LEU 690.0032
GLY 700.0039
SER 710.0042
TYR 720.0034
SER 730.0021
PHE 740.0018
PHE 750.0019
SER 760.0018
PHE 770.0034
PRO 780.0049
GLU 790.0065
LEU 800.0058
GLN 810.0073
VAL 820.0063
LEU 830.0046
ASP 840.0041
LEU 850.0027
SER 860.0029
ARG 870.0013
CYS 880.0008
GLU 890.0023
ILE 900.0031
GLN 910.0049
THR 920.0050
ILE 930.0047
GLU 940.0053
ASP 950.0061
GLY 960.0053
ALA 970.0044
TYR 980.0046
GLN 990.0055
SER 1000.0049
LEU 1010.0054
SER 1020.0071
HIS 1030.0072
LEU 1040.0064
SER 1050.0069
THR 1060.0060
LEU 1070.0055
ILE 1080.0051
LEU 1090.0047
THR 1100.0047
GLY 1110.0041
ASN 1120.0035
PRO 1130.0043
ILE 1140.0051
GLN 1150.0062
SER 1160.0066
LEU 1170.0056
ALA 1180.0062
LEU 1190.0068
GLY 1200.0064
ALA 1210.0057
PHE 1220.0061
SER 1230.0067
GLY 1240.0065
LEU 1250.0065
SER 1260.0074
SER 1270.0065
LEU 1280.0061
GLN 1290.0057
LYS 1300.0056
LEU 1310.0056
VAL 1320.0058
ALA 1330.0058
VAL 1340.0061
GLU 1350.0062
THR 1360.0059
ASN 1370.0061
LEU 1380.0056
ALA 1390.0054
SER 1400.0050
LEU 1410.0048
GLU 1420.0047
ASN 1430.0053
PHE 1440.0055
PRO 1450.0057
ILE 1460.0056
GLY 1470.0057
HIS 1480.0058
LEU 1490.0058
LYS 1500.0057
THR 1510.0058
LEU 1520.0047
LYS 1530.0047
GLU 1540.0050
LEU 1550.0049
ASN 1560.0053
VAL 1570.0055
ALA 1580.0060
HIS 1590.0067
ASN 1600.0064
LEU 1610.0063
ILE 1620.0053
GLN 1630.0047
SER 1640.0037
PHE 1650.0029
LYS 1660.0026
LEU 1670.0028
PRO 1680.0032
GLU 1690.0027
TYR 1700.0036
PHE 1710.0035
SER 1720.0031
ASN 1730.0036
LEU 1740.0040
THR 1750.0039
ASN 1760.0045
LEU 1770.0037
GLU 1780.0043
HIS 1790.0046
LEU 1800.0039
ASP 1810.0045
LEU 1820.0045
SER 1830.0052
SER 1840.0060
ASN 1850.0056
LYS 1860.0055
ILE 1870.0042
GLN 1880.0041
SER 1890.0032
ILE 1900.0024
TYR 1910.0030
CYS 1920.0029
THR 1930.0029
ASP 1940.0022
LEU 1950.0019
ARG 1960.0022
VAL 1970.0015
LEU 1980.0022
HIS 1990.0028
GLN 2000.0027
MET 2010.0033
PRO 2020.0038
LEU 2030.0046
LEU 2040.0039
ASN 2050.0047
LEU 2060.0038
SER 2070.0044
LEU 2080.0035
ASP 2090.0040
LEU 2100.0033
SER 2110.0043
LEU 2120.0050
ASN 2130.0043
PRO 2140.0045
MET 2150.0034
ASN 2160.0038
PHE 2170.0033
ILE 2180.0027
GLN 2190.0037
PRO 2200.0044
GLY 2210.0049
ALA 2220.0036
PHE 2230.0038
LYS 2240.0053
GLU 2250.0060
ILE 2260.0048
ARG 2270.0051
LEU 2280.0047
HIS 2290.0057
LYS 2300.0049
LEU 2310.0036
THR 2320.0038
LEU 2330.0030
ARG 2340.0037
ASN 2350.0039
ASN 2360.0031
PHE 2370.0032
ASP 2380.0041
SER 2390.0036
LEU 2400.0028
ASN 2410.0032
VAL 2420.0031
MET 2430.0022
LYS 2440.0024
THR 2450.0031
CYS 2460.0025
ILE 2470.0027
GLN 2480.0037
GLY 2490.0035
LEU 2500.0035
ALA 2510.0048
GLY 2520.0058
LEU 2530.0052
GLU 2540.0060
VAL 2550.0056
HIS 2560.0064
ARG 2570.0058
LEU 2580.0046
VAL 2590.0043
LEU 2600.0035
GLY 2610.0036
GLU 2620.0043
PHE 2630.0055
ARG 2640.0060
ASN 2650.0067
GLU 2660.0059
GLY 2670.0050
ASN 2680.0043
LEU 2690.0035
GLU 2700.0040
LYS 2710.0032
PHE 2720.0026
ASP 2730.0024
LYS 2740.0023
SER 2750.0026
ALA 2760.0024
LEU 2770.0030
GLU 2780.0036
GLY 2790.0040
LEU 2800.0043
CYS 2810.0053
ASN 2820.0058
LEU 2830.0057
THR 2840.0065
ILE 2850.0061
GLU 2860.0071
GLU 2870.0063
PHE 2880.0053
ARG 2890.0049
LEU 2900.0042
ALA 2910.0046
TYR 2920.0046
LEU 2930.0037
ASP 2940.0042
TYR 2950.0036
TYR 2960.0039
LEU 2970.0035
ASP 2980.0036
GLY 2990.0035
ILE 3000.0035
ILE 3010.0033
ASP 3020.0033
LEU 3030.0032
PHE 3040.0038
ASN 3050.0042
CYS 3060.0045
LEU 3070.0049
THR 3080.0050
ASN 3090.0057
VAL 3100.0058
SER 3110.0064
SER 3120.0061
PHE 3130.0054
SER 3140.0053
LEU 3150.0048
VAL 3160.0050
SER 3170.0050
VAL 3180.0044
THR 3190.0043
ILE 3200.0040
GLU 3210.0041
ARG 3220.0042
VAL 3230.0042
LYS 3240.0043
ASP 3250.0041
PHE 3260.0043
SER 3270.0043
TYR 3280.0042
ASN 3290.0044
PHE 3300.0045
GLY 3310.0050
TRP 3320.0052
GLN 3330.0060
HIS 3340.0059
LEU 3350.0054
GLU 3360.0054
LEU 3370.0050
VAL 3380.0053
ASN 3390.0051
CYS 3400.0045
LYS 3410.0043
PHE 3420.0039
GLY 3430.0037
GLN 3440.0038
PHE 3450.0040
PRO 3460.0039
THR 3470.0049
LEU 3480.0048
LYS 3490.0049
LEU 3500.0048
LYS 3510.0048
SER 3520.0052
LEU 3530.0053
LYS 3540.0058
ARG 3550.0057
LEU 3560.0055
THR 3570.0049
PHE 3580.0049
THR 3590.0049
SER 3600.0050
ASN 3610.0049
LYS 3620.0040
GLY 3630.0034
GLY 3640.0028
ASN 3650.0030
ALA 3660.0027
PHE 3670.0050
SER 3680.0053
GLU 3690.0051
VAL 3700.0051
ASP 3710.0053
LEU 3720.0060
PRO 3730.0064
SER 3740.0057
LEU 3750.0053
GLU 3760.0050
PHE 3770.0041
LEU 3780.0042
ASP 3790.0042
LEU 3800.0044
SER 3810.0043
ARG 3820.0040
ASN 3830.0045
GLY 3840.0045
LEU 3850.0043
SER 3860.0043
PHE 3870.0047
LYS 3880.0051
GLY 3890.0045
CYS 3900.0036
CYS 3910.0030
SER 3920.0037
GLN 3930.0043
SER 3940.0054
ASP 3950.0052
PHE 3960.0051
GLY 3970.0070
THR 3980.0062
ILE 3990.0063
SER 4000.0053
LEU 4010.0042
LYS 4020.0024
TYR 4030.0020
LEU 4040.0023
ASP 4050.0025
LEU 4060.0034
SER 4070.0029
PHE 4080.0037
ASN 4090.0043
GLY 4100.0051
VAL 4110.0051
ILE 4120.0048
THR 4130.0053
MET 4140.0044
SER 4150.0046
SER 4160.0032
ASN 4170.0030
PHE 4180.0017
LEU 4190.0016
GLY 4200.0026
LEU 4210.0018
GLU 4220.0011
GLN 4230.0023
LEU 4240.0008
GLU 4250.0017
HIS 4260.0011
LEU 4270.0019
ASP 4280.0024
PHE 4290.0034
GLN 4300.0037
HIS 4310.0045
SER 4320.0044
ASN 4330.0059
LEU 4340.0054
LYS 4350.0066
GLN 4360.0068
MET 4370.0067
SER 4380.0080
GLU 4390.0076
PHE 4400.0065
SER 4410.0058
VAL 4420.0049
PHE 4430.0041
LEU 4440.0041
SER 4450.0028
LEU 4460.0031
ARG 4470.0043
ASN 4480.0040
LEU 4490.0037
ILE 4500.0048
TYR 4510.0046
LEU 4520.0049
ASP 4530.0050
ILE 4540.0056
SER 4550.0059
HIS 4560.0063
THR 4570.0063
HIS 4580.0077
THR 4590.0075
ARG 4600.0090
VAL 4610.0090
ALA 4620.0104
PHE 4630.0098
ASN 4640.0101
GLY 4650.0090
ILE 4660.0082
PHE 4670.0078
ASN 4680.0078
GLY 4690.0068
LEU 4700.0068
SER 4710.0075
SER 4720.0070
LEU 4730.0071
GLU 4740.0076
VAL 4750.0076
LEU 4760.0079
LYS 4770.0076
MET 4780.0080
ALA 4790.0081
GLY 4800.0083
ASN 4810.0086
SER 4820.0098
PHE 4830.0104
GLN 4840.0111
GLU 4850.0114
ASN 4860.0108
PHE 4870.0110
LEU 4880.0107
PRO 4890.0110
ASP 4900.0109
ILE 4910.0106
PHE 4920.0100
THR 4930.0104
GLU 4940.0097
LEU 4950.0093
ARG 4960.0096
ASN 4970.0094
LEU 4980.0096
THR 4990.0098
PHE 5000.0099
LEU 5010.0099
ASP 5020.0096
LEU 5030.0098
SER 5040.0095
GLN 5050.0095
CYS 5060.0099
GLN 5070.0100
LEU 5080.0100
GLU 5090.0101
GLN 5100.0103
LEU 5110.0103
SER 5120.0105
PRO 5130.0102
THR 5140.0106
ALA 5150.0108
PHE 5160.0106
ASN 5170.0103
SER 5180.0104
LEU 5190.0103
SER 5200.0103
SER 5210.0103
LEU 5220.0111
GLN 5230.0112
VAL 5240.0111
LEU 5250.0106
ASN 5260.0106
MET 5270.0104
SER 5280.0105
HIS 5290.0107
ASN 5300.0103
ASN 5310.0095
PHE 5320.0085
PHE 5330.0071
SER 5340.0053
LEU 5350.0052
ASP 5360.0052
THR 5370.0065
PHE 5380.0069
PRO 5390.0087
TYR 5400.0093
LYS 5410.0093
CYS 5420.0094
LEU 5430.0100
ASN 5440.0105
SER 5450.0111
LEU 5460.0108
GLN 5470.0125
VAL 5480.0119
LEU 5490.0107
ASP 5500.0107
TYR 5510.0094
SER 5520.0101
LEU 5530.0111
ASN 5540.0101
HIS 5550.0090
ILE 5560.0063
MET 5570.0065
THR 5580.0044
SER 5590.0020
LYS 5600.0032
LYS 5610.0015
GLN 5620.0028
GLU 5630.0040
LEU 5640.0041
GLN 5650.0065
HIS 5660.0076
PHE 5670.0085
PRO 5680.0098
SER 5690.0109
SER 5700.0118
LEU 5710.0110
ALA 5720.0138
PHE 5730.0125
LEU 5740.0099
ASN 5750.0099
LEU 5760.0075
THR 5770.0088
GLN 5780.0110
ASN 5790.0095
ASP 5800.0103
PHE 5810.0074
ALA 5820.0132
CYS 5830.0139
THR 5840.0182
CYS 5850.0200
GLU 5860.0182
HIS 5870.0120
GLN 5880.0137
SER 5890.0118
PHE 5900.0065
LEU 5910.0077
GLN 5920.0104
TRP 5930.0083
ILE 5940.0050
LYS 5950.0084
ASP 5960.0118
GLN 5970.0098
ARG 5980.0077
GLN 5990.0118
LEU 6000.0117
LEU 6010.0084
VAL 6020.0108
GLU 6030.0093
VAL 6040.0049
GLU 6050.0056
ARG 6060.0089
MET 6070.0066
GLU 6080.0096
CYS 6090.0122
ALA 6100.0164
THR 6110.0190
PRO 6120.0234
SER 6130.0273
ASP 6140.0275
LYS 6150.0208
GLN 6160.0206
GLY 6170.0164
MET 6180.0128
PRO 6190.0073
VAL 6200.0064
LEU 6210.0055
SER 6220.0092
LEU 6230.0135
ASN 6240.0197
ILE 6250.0202
THR 6260.0270
CYS 6270.0346
GLU 10.0443
ALA 20.0301
ALA 30.0322
ALA 40.0346
LYS 50.0224
MET 60.0128
GLN 70.0196
ARG 80.0296
LEU 90.0258
VAL 100.0232
LEU 110.0291
LEU 120.0352
LEU 130.0342
ALA 140.0316
ILE 150.0387
SER 160.0370
LEU 170.0349
LEU 180.0315
LEU 190.0317
TYR 200.0318
GLN 210.0251
ASP 220.0215
LEU 230.0194
PRO 240.0180
VAL 250.0214
ARG 260.0210
SER 270.0154
GLU 280.0214
PHE 290.0201
GLU 300.0124
LEU 310.0104
ASP 320.0128
ARG 330.0099
ILE 340.0077
CYS 350.0100
GLY 360.0073
TYR 370.0057
GLY 380.0065
THR 390.0083
ALA 400.0093
ARG 410.0104
CYS 420.0147
ARG 430.0160
LYS 440.0202
LYS 450.0186
CYS 460.0136
ARG 470.0100
SER 480.0090
GLN 490.0082
GLU 500.0109
TYR 510.0141
ARG 520.0177
ILE 530.0196
GLY 540.0224
ARG 550.0236
CYS 560.0209
PRO 570.0236
ASN 580.0246
THR 590.0264
TYR 600.0224
ALA 610.0193
CYS 620.0165
CYS 630.0139
LEU 640.0122
ARG 650.0097
LYS 660.0098
TRP 670.0098
ASP 680.0085
GLU 690.0092
SER 700.0080
LEU 710.0079
LEU 720.0092
ASN 730.0090
ARG 740.0079
THR 750.0089
LYS 760.0094
PRO 770.0095
GLU 780.0093
ALA 790.0100
ALA 800.0100
ALA 810.0078
LYS 820.0077
LYS 830.0053
GLU 840.0070
MET 850.0046
ASN 860.0061
LEU 870.0049
SER 880.0039
VAL 890.0027
GLY 900.0023
LEU 910.0017
GLY 920.0030
GLY 930.0041
GLY 940.0041
SER 950.0026
ASN 960.0040
LEU 970.0036
SER 980.0048
VAL 990.0053
GLY 1000.0068
LEU 1010.0091
GLY 1020.0179
GLU 1030.0232
ILE 1040.0352
GLY 1050.0452
GLY 1060.0584
GLY 1070.0436
SER 1080.0314
LYS 1090.0158
LEU 1100.0061
LEU 1110.0081
ASP 1120.0076
ILE 1130.0062
ASN 1140.0065
LEU 1150.0062
GLY 1160.0077
ARG 1170.0118
GLY 1180.0100
GLY 1190.0086
GLY 1200.0043
SER 1210.0022
MET 1220.0008
VAL 1230.0018
ASP 1240.0022
LEU 1250.0036
THR 1260.0044
PHE 1270.0057
GLY 1280.0060
GLY 1290.0074
VAL 1300.0083
GLY 1310.0108
GLY 1320.0112
GLY 1330.0114
SER 1340.0110
THR 1350.0110
PHE 1360.0103
THR 1370.0111
PHE 1380.0082
PHE 1390.0094
PRO 1400.0071
LEU 1410.0102
VAL 1420.0113
ILE 1430.0129
GLY 1440.0164
GLY 1450.0177
GLY 1460.0158
SER 1470.0136
ASP 1480.0107
ALA 1490.0103
MET 1500.0088
TYR 1510.0084
LEU 1520.0076
GLY 1530.0093
PHE 1540.0102
ALA 1550.0120
ALA 1560.0105
GLY 1570.0112
GLY 1580.0112
GLY 1590.0114
SER 1600.0110
ALA 1610.0111
GLY 1620.0103
GLY 1630.0089
GLU 1640.0074
ASN 1650.0068
HIS 1660.0045
VAL 1670.0035
ALA 1680.0019
PHE 1690.0010
GLY 1700.0014
PRO 1710.0045
GLY 1720.0036
PRO 1730.0037
GLY 1740.0025
VAL 1750.0019
ASP 1760.0024
LEU 1770.0040
THR 1780.0060
PHE 1790.0079
GLY 1800.0099
GLY 1810.0104
VAL 1820.0084
GLN 1830.0062
PHE 1840.0036
ALA 1850.0031
MET 1860.0044
VAL 1870.0088
ASN 1880.0123
ASN 1890.0195
GLY 1900.0232
PRO 1910.0285
GLY 1920.0109
PRO 1930.0178
GLY 1940.0241
GLU 1950.0086
SER 1960.0139
PHE 1970.0128
THR 1980.0110
ALA 1990.0093
GLN 2000.0085
PRO 2010.0036
ALA 2020.0033
ASP 2030.0022
MET 2040.0079
GLN 2050.0104
ALA 2060.0085
GLY 2070.0207
ILE 2080.0074
LYS 2090.0124
GLY 2100.0087
PRO 2110.0159
GLY 2120.0351
PRO 2130.0261
GLY 2140.0142
GLY 2150.0287
SER 2160.0474
ILE 2170.0309
GLN 2180.0140
VAL 2190.0077
ILE 2200.0348
ASN 2210.0291
GLY 2220.0231
SER 2230.0230
THR 2240.0207
ILE 2250.0161
GLY 2260.0076
THR 2270.0082
GLY 2280.0087
SER 2290.0138
LYS 2300.0099
LYS 2310.0110
THR 2320.0100
ILE 2330.0101
LEU 2340.0093
ILE 2350.0093
TYR 2360.0088
SER 2370.0082
ILE 2380.0070
ILE 2390.0090
GLY 2400.0077
VAL 2410.0057
LYS 2420.0047
LYS 2430.0041
GLY 2440.0059
THR 2450.0068
LEU 2460.0117
ALA 2470.0143
TRP 2480.0144
ALA 2490.0168
ARG 2500.0168
THR 2510.0191
GLY 2520.0187
PHE 2530.0184
SER 2540.0183
PRO 2550.0176
ALA 2560.0211
LYS 2570.0205
LYS 2580.0169
LEU 2590.0252
ASN 2600.0369
ALA 2610.0558
GLY 2620.0349
VAL 2630.0319
VAL 2640.0185
ARG 2650.0126
VAL 2660.0106
PHE 2670.0116
PHE 2680.0062
LEU 2690.0085
ASN 2700.0069
GLN 2710.0037
LYS 2720.0025
LYS 2730.0032
ALA 2740.0035
LYS 2750.0024
ASP 2760.0061
VAL 2770.0103
LEU 2780.0057
ARG 2790.0076
LYS 2800.0149
THR 2810.0214
SER 2820.0254
ARG 2830.0205
PRO 2840.0312
MET 2850.0402
VAL 2860.0321
ASP 2870.0405
LEU 2880.0335
THR 2890.0370
PHE 2900.0222
GLY 2910.0403
GLY 2920.0264

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.