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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0835
GLU 270.0073
PRO 280.0075
CYS 290.0052
VAL 300.0035
GLU 310.0017
VAL 320.0009
VAL 330.0025
PRO 340.0038
ASN 350.0052
ILE 360.0039
THR 370.0015
TYR 380.0012
GLN 390.0029
CYS 400.0046
MET 410.0060
GLU 420.0082
LEU 430.0086
ASN 440.0098
PHE 450.0085
TYR 460.0095
LYS 470.0082
ILE 480.0063
PRO 490.0066
ASP 500.0078
ASN 510.0078
LEU 520.0059
PRO 530.0064
PHE 540.0072
SER 550.0063
THR 560.0039
LYS 570.0035
ASN 580.0017
LEU 590.0005
ASP 600.0024
LEU 610.0040
SER 620.0053
PHE 630.0074
ASN 640.0075
PRO 650.0086
LEU 660.0071
ARG 670.0071
HIS 680.0064
LEU 690.0050
GLY 700.0056
SER 710.0051
TYR 720.0051
SER 730.0051
PHE 740.0042
PHE 750.0059
SER 760.0064
PHE 770.0047
PRO 780.0057
GLU 790.0052
LEU 800.0030
GLN 810.0033
VAL 820.0022
LEU 830.0011
ASP 840.0027
LEU 850.0035
SER 860.0052
ARG 870.0063
CYS 880.0059
GLU 890.0070
ILE 900.0058
GLN 910.0063
THR 920.0056
ILE 930.0042
GLU 940.0042
ASP 950.0033
GLY 960.0028
ALA 970.0032
TYR 980.0019
GLN 990.0030
SER 1000.0040
LEU 1010.0028
SER 1020.0037
HIS 1030.0041
LEU 1040.0025
SER 1050.0039
THR 1060.0035
LEU 1070.0027
ILE 1080.0036
LEU 1090.0039
THR 1100.0052
GLY 1110.0060
ASN 1120.0054
PRO 1130.0064
ILE 1140.0053
GLN 1150.0058
SER 1160.0047
LEU 1170.0042
ALA 1180.0034
LEU 1190.0022
GLY 1200.0015
ALA 1210.0021
PHE 1220.0010
SER 1230.0005
GLY 1240.0015
LEU 1250.0015
SER 1260.0029
SER 1270.0036
LEU 1280.0033
GLN 1290.0046
LYS 1300.0046
LEU 1310.0042
VAL 1320.0047
ALA 1330.0048
VAL 1340.0055
GLU 1350.0057
THR 1360.0051
ASN 1370.0053
LEU 1380.0051
ALA 1390.0056
SER 1400.0053
LEU 1410.0049
GLU 1420.0049
ASN 1430.0046
PHE 1440.0042
PRO 1450.0034
ILE 1460.0034
GLY 1470.0032
HIS 1480.0027
LEU 1490.0030
LYS 1500.0033
THR 1510.0038
LEU 1520.0044
LYS 1530.0050
GLU 1540.0052
LEU 1550.0050
ASN 1560.0053
VAL 1570.0052
ALA 1580.0056
HIS 1590.0057
ASN 1600.0054
LEU 1610.0054
ILE 1620.0050
GLN 1630.0050
SER 1640.0050
PHE 1650.0050
LYS 1660.0051
LEU 1670.0052
PRO 1680.0051
GLU 1690.0052
TYR 1700.0048
PHE 1710.0048
SER 1720.0047
ASN 1730.0042
LEU 1740.0043
THR 1750.0045
ASN 1760.0046
LEU 1770.0047
GLU 1780.0050
HIS 1790.0051
LEU 1800.0051
ASP 1810.0053
LEU 1820.0051
SER 1830.0053
SER 1840.0055
ASN 1850.0052
LYS 1860.0051
ILE 1870.0047
GLN 1880.0043
SER 1890.0040
ILE 1900.0041
TYR 1910.0040
CYS 1920.0047
THR 1930.0049
ASP 1940.0048
LEU 1950.0050
ARG 1960.0053
VAL 1970.0052
LEU 1980.0050
HIS 1990.0053
GLN 2000.0055
MET 2010.0052
PRO 2020.0050
LEU 2030.0052
LEU 2040.0050
ASN 2050.0047
LEU 2060.0045
SER 2070.0044
LEU 2080.0044
ASP 2090.0046
LEU 2100.0045
SER 2110.0047
LEU 2120.0047
ASN 2130.0046
PRO 2140.0045
MET 2150.0040
ASN 2160.0038
PHE 2170.0033
ILE 2180.0034
GLN 2190.0036
PRO 2200.0039
GLY 2210.0044
ALA 2220.0041
PHE 2230.0041
LYS 2240.0046
GLU 2250.0049
ILE 2260.0045
ARG 2270.0039
LEU 2280.0037
HIS 2290.0037
LYS 2300.0034
LEU 2310.0033
THR 2320.0036
LEU 2330.0036
ARG 2340.0040
ASN 2350.0043
ASN 2360.0040
PHE 2370.0043
ASP 2380.0052
SER 2390.0052
LEU 2400.0050
ASN 2410.0051
VAL 2420.0041
MET 2430.0038
LYS 2440.0042
THR 2450.0040
CYS 2460.0035
ILE 2470.0033
GLN 2480.0037
GLY 2490.0033
LEU 2500.0034
ALA 2510.0041
GLY 2520.0042
LEU 2530.0035
GLU 2540.0037
VAL 2550.0029
HIS 2560.0028
ARG 2570.0023
LEU 2580.0024
VAL 2590.0025
LEU 2600.0028
GLY 2610.0033
GLU 2620.0043
PHE 2630.0050
ARG 2640.0056
ASN 2650.0065
GLU 2660.0062
GLY 2670.0062
ASN 2680.0056
LEU 2690.0054
GLU 2700.0064
LYS 2710.0062
PHE 2720.0053
ASP 2730.0058
LYS 2740.0058
SER 2750.0056
ALA 2760.0047
LEU 2770.0040
GLU 2780.0047
GLY 2790.0041
LEU 2800.0037
CYS 2810.0047
ASN 2820.0045
LEU 2830.0037
THR 2840.0037
ILE 2850.0028
GLU 2860.0025
GLU 2870.0018
PHE 2880.0020
ARG 2890.0021
LEU 2900.0027
ALA 2910.0029
TYR 2920.0036
LEU 2930.0042
ASP 2940.0054
TYR 2950.0056
TYR 2960.0053
LEU 2970.0052
ASP 2980.0059
GLY 2990.0054
ILE 3000.0048
ILE 3010.0054
ASP 3020.0056
LEU 3030.0048
PHE 3040.0042
ASN 3050.0048
CYS 3060.0044
LEU 3070.0035
THR 3080.0038
ASN 3090.0035
VAL 3100.0027
SER 3110.0023
SER 3120.0016
PHE 3130.0020
SER 3140.0020
LEU 3150.0027
VAL 3160.0029
SER 3170.0035
VAL 3180.0037
THR 3190.0044
ILE 3200.0046
GLU 3210.0052
ARG 3220.0052
VAL 3230.0045
LYS 3240.0048
ASP 3250.0047
PHE 3260.0039
SER 3270.0042
TYR 3280.0044
ASN 3290.0041
PHE 3300.0037
GLY 3310.0034
TRP 3320.0025
GLN 3330.0016
HIS 3340.0012
LEU 3350.0019
GLU 3360.0020
LEU 3370.0025
VAL 3380.0027
ASN 3390.0033
CYS 3400.0036
LYS 3410.0043
PHE 3420.0042
GLY 3430.0049
GLN 3440.0044
PHE 3450.0037
PRO 3460.0036
THR 3470.0034
LEU 3480.0029
LYS 3490.0030
LEU 3500.0028
LYS 3510.0027
SER 3520.0023
LEU 3530.0019
LYS 3540.0015
ARG 3550.0013
LEU 3560.0016
THR 3570.0022
PHE 3580.0025
THR 3590.0026
SER 3600.0029
ASN 3610.0031
LYS 3620.0037
GLY 3630.0041
GLY 3640.0041
ASN 3650.0034
ALA 3660.0032
PHE 3670.0025
SER 3680.0025
GLU 3690.0024
VAL 3700.0023
ASP 3710.0023
LEU 3720.0018
PRO 3730.0019
SER 3740.0023
LEU 3750.0020
GLU 3760.0022
PHE 3770.0018
LEU 3780.0020
ASP 3790.0021
LEU 3800.0023
SER 3810.0023
ARG 3820.0028
ASN 3830.0028
GLY 3840.0028
LEU 3850.0028
SER 3860.0027
PHE 3870.0023
LYS 3880.0023
GLY 3890.0021
CYS 3900.0019
CYS 3910.0021
SER 3920.0018
GLN 3930.0023
SER 3940.0025
ASP 3950.0022
PHE 3960.0024
GLY 3970.0017
THR 3980.0022
ILE 3990.0026
SER 4000.0029
LEU 4010.0022
LYS 4020.0023
TYR 4030.0021
LEU 4040.0021
ASP 4050.0021
LEU 4060.0021
SER 4070.0031
PHE 4080.0030
ASN 4090.0028
GLY 4100.0025
VAL 4110.0025
ILE 4120.0020
THR 4130.0020
MET 4140.0020
SER 4150.0026
SER 4160.0029
ASN 4170.0027
PHE 4180.0026
LEU 4190.0029
GLY 4200.0029
LEU 4210.0025
GLU 4220.0028
GLN 4230.0027
LEU 4240.0023
GLU 4250.0019
HIS 4260.0017
LEU 4270.0022
ASP 4280.0023
PHE 4290.0026
GLN 4300.0025
HIS 4310.0029
SER 4320.0022
ASN 4330.0019
LEU 4340.0018
LYS 4350.0019
GLN 4360.0022
MET 4370.0021
SER 4380.0024
GLU 4390.0029
PHE 4400.0032
SER 4410.0031
VAL 4420.0027
PHE 4430.0026
LEU 4440.0031
SER 4450.0032
LEU 4460.0028
ARG 4470.0030
ASN 4480.0028
LEU 4490.0024
ILE 4500.0021
TYR 4510.0017
LEU 4520.0019
ASP 4530.0016
ILE 4540.0018
SER 4550.0014
HIS 4560.0015
THR 4570.0017
HIS 4580.0012
THR 4590.0018
ARG 4600.0020
VAL 4610.0028
ALA 4620.0028
PHE 4630.0032
ASN 4640.0035
GLY 4650.0036
ILE 4660.0030
PHE 4670.0030
ASN 4680.0034
GLY 4690.0035
LEU 4700.0032
SER 4710.0034
SER 4720.0032
LEU 4730.0028
GLU 4740.0026
VAL 4750.0022
LEU 4760.0022
LYS 4770.0017
MET 4780.0018
ALA 4790.0012
GLY 4800.0010
ASN 4810.0016
SER 4820.0024
PHE 4830.0030
GLN 4840.0033
GLU 4850.0035
ASN 4860.0032
PHE 4870.0038
LEU 4880.0037
PRO 4890.0040
ASP 4900.0041
ILE 4910.0039
PHE 4920.0037
THR 4930.0041
GLU 4940.0041
LEU 4950.0038
ARG 4960.0040
ASN 4970.0037
LEU 4980.0034
THR 4990.0032
PHE 5000.0029
LEU 5010.0029
ASP 5020.0025
LEU 5030.0028
SER 5040.0022
GLN 5050.0019
CYS 5060.0026
GLN 5070.0031
LEU 5080.0035
GLU 5090.0038
GLN 5100.0042
LEU 5110.0044
SER 5120.0043
PRO 5130.0045
THR 5140.0045
ALA 5150.0043
PHE 5160.0043
ASN 5170.0044
SER 5180.0045
LEU 5190.0042
SER 5200.0044
SER 5210.0041
LEU 5220.0039
GLN 5230.0038
VAL 5240.0036
LEU 5250.0036
ASN 5260.0034
MET 5270.0038
SER 5280.0033
HIS 5290.0031
ASN 5300.0036
ASN 5310.0040
PHE 5320.0046
PHE 5330.0047
SER 5340.0047
LEU 5350.0047
ASP 5360.0048
THR 5370.0046
PHE 5380.0047
PRO 5390.0046
TYR 5400.0046
LYS 5410.0047
CYS 5420.0046
LEU 5430.0045
ASN 5440.0045
SER 5450.0044
LEU 5460.0042
GLN 5470.0042
VAL 5480.0042
LEU 5490.0042
ASP 5500.0042
TYR 5510.0043
SER 5520.0044
LEU 5530.0046
ASN 5540.0047
HIS 5550.0048
ILE 5560.0047
MET 5570.0053
THR 5580.0051
SER 5590.0049
LYS 5600.0050
LYS 5610.0048
GLN 5620.0046
GLU 5630.0046
LEU 5640.0047
GLN 5650.0047
HIS 5660.0047
PHE 5670.0046
PRO 5680.0045
SER 5690.0045
SER 5700.0044
LEU 5710.0044
ALA 5720.0045
PHE 5730.0046
LEU 5740.0046
ASN 5750.0049
LEU 5760.0049
THR 5770.0053
GLN 5780.0057
ASN 5790.0056
ASP 5800.0058
PHE 5810.0056
ALA 5820.0063
CYS 5830.0062
THR 5840.0062
CYS 5850.0057
GLU 5860.0056
HIS 5870.0053
GLN 5880.0052
SER 5890.0047
PHE 5900.0049
LEU 5910.0054
GLN 5920.0052
TRP 5930.0048
ILE 5940.0053
LYS 5950.0054
ASP 5960.0048
GLN 5970.0048
ARG 5980.0051
GLN 5990.0049
LEU 6000.0048
LEU 6010.0052
VAL 6020.0054
GLU 6030.0059
VAL 6040.0059
GLU 6050.0064
ARG 6060.0065
MET 6070.0062
GLU 6080.0068
CYS 6090.0068
ALA 6100.0074
THR 6110.0074
PRO 6120.0079
SER 6130.0089
ASP 6140.0090
LYS 6150.0081
GLN 6160.0084
GLY 6170.0081
MET 6180.0076
PRO 6190.0070
VAL 6200.0064
LEU 6210.0061
SER 6220.0069
LEU 6230.0069
ASN 6240.0069
ILE 6250.0062
THR 6260.0064
CYS 6270.0068
GLU 10.0236
ALA 20.0181
ALA 30.0212
ALA 40.0221
LYS 50.0144
MET 60.0114
GLN 70.0163
ARG 80.0188
LEU 90.0148
VAL 100.0141
LEU 110.0180
LEU 120.0196
LEU 130.0177
ALA 140.0182
ILE 150.0226
SER 160.0205
LEU 170.0188
LEU 180.0170
LEU 190.0178
TYR 200.0179
GLN 210.0133
ASP 220.0111
LEU 230.0106
PRO 240.0102
VAL 250.0125
ARG 260.0098
SER 270.0068
GLU 280.0091
PHE 290.0087
GLU 300.0053
LEU 310.0020
ASP 320.0025
ARG 330.0012
ILE 340.0012
CYS 350.0029
GLY 360.0023
TYR 370.0020
GLY 380.0020
THR 390.0035
ALA 400.0036
ARG 410.0036
CYS 420.0045
ARG 430.0059
LYS 440.0080
LYS 450.0087
CYS 460.0078
ARG 470.0071
SER 480.0078
GLN 490.0073
GLU 500.0076
TYR 510.0087
ARG 520.0090
ILE 530.0091
GLY 540.0090
ARG 550.0085
CYS 560.0065
PRO 570.0065
ASN 580.0073
THR 590.0087
TYR 600.0077
ALA 610.0079
CYS 620.0069
CYS 630.0068
LEU 640.0069
ARG 650.0067
LYS 660.0077
TRP 670.0077
ASP 680.0071
GLU 690.0071
SER 700.0067
LEU 710.0068
LEU 720.0077
ASN 730.0075
ARG 740.0069
THR 750.0076
LYS 760.0085
PRO 770.0086
GLU 780.0077
ALA 790.0083
ALA 800.0094
ALA 810.0132
LYS 820.0138
LYS 830.0115
GLU 840.0131
MET 850.0110
ASN 860.0113
LEU 870.0089
SER 880.0080
VAL 890.0057
GLY 900.0064
LEU 910.0063
GLY 920.0094
GLY 930.0121
GLY 940.0124
SER 950.0091
ASN 960.0084
LEU 970.0068
SER 980.0091
VAL 990.0092
GLY 1000.0122
LEU 1010.0135
GLY 1020.0199
GLU 1030.0221
ILE 1040.0291
GLY 1050.0344
GLY 1060.0401
GLY 1070.0293
SER 1080.0213
LYS 1090.0122
LEU 1100.0070
LEU 1110.0078
ASP 1120.0064
ILE 1130.0045
ASN 1140.0050
LEU 1150.0047
GLY 1160.0068
ARG 1170.0098
GLY 1180.0096
GLY 1190.0106
GLY 1200.0100
SER 1210.0061
MET 1220.0053
VAL 1230.0034
ASP 1240.0044
LEU 1250.0050
THR 1260.0064
PHE 1270.0076
GLY 1280.0091
GLY 1290.0099
VAL 1300.0112
GLY 1310.0106
GLY 1320.0107
GLY 1330.0098
SER 1340.0094
THR 1350.0083
PHE 1360.0075
THR 1370.0074
PHE 1380.0059
PHE 1390.0081
PRO 1400.0075
LEU 1410.0072
VAL 1420.0101
ILE 1430.0069
GLY 1440.0094
GLY 1450.0074
GLY 1460.0064
SER 1470.0055
ASP 1480.0037
ALA 1490.0043
MET 1500.0038
TYR 1510.0064
LEU 1520.0069
GLY 1530.0080
PHE 1540.0093
ALA 1550.0109
ALA 1560.0109
GLY 1570.0098
GLY 1580.0091
GLY 1590.0091
SER 1600.0091
ALA 1610.0080
GLY 1620.0088
GLY 1630.0079
GLU 1640.0075
ASN 1650.0055
HIS 1660.0047
VAL 1670.0033
ALA 1680.0038
PHE 1690.0045
GLY 1700.0064
PRO 1710.0094
GLY 1720.0114
PRO 1730.0125
GLY 1740.0103
VAL 1750.0071
ASP 1760.0061
LEU 1770.0043
THR 1780.0045
PHE 1790.0044
GLY 1800.0066
GLY 1810.0087
VAL 1820.0069
GLN 1830.0077
PHE 1840.0079
ALA 1850.0110
MET 1860.0133
VAL 1870.0158
ASN 1880.0157
ASN 1890.0213
GLY 1900.0214
PRO 1910.0096
GLY 1920.0279
PRO 1930.0517
GLY 1940.0471
GLU 1950.0099
SER 1960.0374
PHE 1970.0354
THR 1980.0214
ALA 1990.0227
GLN 2000.0146
PRO 2010.0091
ALA 2020.0147
ASP 2030.0166
MET 2040.0058
GLN 2050.0202
ALA 2060.0195
GLY 2070.0107
ILE 2080.0087
LYS 2090.0116
GLY 2100.0152
PRO 2110.0180
GLY 2120.0163
PRO 2130.0318
GLY 2140.0324
GLY 2150.0235
SER 2160.0346
ILE 2170.0381
GLN 2180.0346
VAL 2190.0429
ILE 2200.0372
ASN 2210.0272
GLY 2220.0305
SER 2230.0271
THR 2240.0199
ILE 2250.0271
GLY 2260.0301
THR 2270.0249
GLY 2280.0196
SER 2290.0114
LYS 2300.0088
LYS 2310.0115
THR 2320.0157
ILE 2330.0155
LEU 2340.0209
ILE 2350.0201
TYR 2360.0155
SER 2370.0130
ILE 2380.0092
ILE 2390.0094
GLY 2400.0053
VAL 2410.0048
LYS 2420.0046
LYS 2430.0050
GLY 2440.0065
THR 2450.0068
LEU 2460.0121
ALA 2470.0144
TRP 2480.0189
ALA 2490.0211
ARG 2500.0256
THR 2510.0278
GLY 2520.0250
PHE 2530.0214
SER 2540.0193
PRO 2550.0167
ALA 2560.0167
LYS 2570.0163
LYS 2580.0164
LEU 2590.0268
ASN 2600.0293
ALA 2610.0445
GLY 2620.0362
VAL 2630.0334
VAL 2640.0317
ARG 2650.0237
VAL 2660.0196
PHE 2670.0167
PHE 2680.0140
LEU 2690.0124
ASN 2700.0188
GLN 2710.0079
LYS 2720.0063
LYS 2730.0111
ALA 2740.0082
LYS 2750.0072
ASP 2760.0181
VAL 2770.0201
LEU 2780.0136
ARG 2790.0205
LYS 2800.0291
THR 2810.0358
SER 2820.0481
ARG 2830.0413
PRO 2840.0629
MET 2850.0835
VAL 2860.0713
ASP 2870.0767
LEU 2880.0623
THR 2890.0655
PHE 2900.0386
GLY 2910.0681
GLY 2920.0490

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.