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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0816
GLU 270.0094
PRO 280.0104
CYS 290.0091
VAL 300.0108
GLU 310.0110
VAL 320.0120
VAL 330.0118
PRO 340.0108
ASN 350.0082
ILE 360.0087
THR 370.0087
TYR 380.0078
GLN 390.0081
CYS 400.0065
MET 410.0068
GLU 420.0069
LEU 430.0075
ASN 440.0067
PHE 450.0052
TYR 460.0051
LYS 470.0037
ILE 480.0024
PRO 490.0039
ASP 500.0039
ASN 510.0056
LEU 520.0049
PRO 530.0046
PHE 540.0030
SER 550.0051
THR 560.0055
LYS 570.0066
ASN 580.0068
LEU 590.0051
ASP 600.0053
LEU 610.0037
SER 620.0043
PHE 630.0042
ASN 640.0036
PRO 650.0031
LEU 660.0021
ARG 670.0020
HIS 680.0025
LEU 690.0025
GLY 700.0034
SER 710.0040
TYR 720.0037
SER 730.0025
PHE 740.0024
PHE 750.0027
SER 760.0019
PHE 770.0027
PRO 780.0041
GLU 790.0051
LEU 800.0048
GLN 810.0063
VAL 820.0057
LEU 830.0043
ASP 840.0042
LEU 850.0030
SER 860.0035
ARG 870.0025
CYS 880.0016
GLU 890.0012
ILE 900.0018
GLN 910.0028
THR 920.0033
ILE 930.0035
GLU 940.0042
ASP 950.0050
GLY 960.0047
ALA 970.0040
TYR 980.0042
GLN 990.0051
SER 1000.0047
LEU 1010.0049
SER 1020.0063
HIS 1030.0063
LEU 1040.0056
SER 1050.0059
THR 1060.0051
LEU 1070.0048
ILE 1080.0044
LEU 1090.0039
THR 1100.0038
GLY 1110.0032
ASN 1120.0026
PRO 1130.0026
ILE 1140.0033
GLN 1150.0037
SER 1160.0042
LEU 1170.0039
ALA 1180.0045
LEU 1190.0049
GLY 1200.0050
ALA 1210.0044
PHE 1220.0050
SER 1230.0056
GLY 1240.0057
LEU 1250.0055
SER 1260.0063
SER 1270.0055
LEU 1280.0050
GLN 1290.0043
LYS 1300.0041
LEU 1310.0040
VAL 1320.0042
ALA 1330.0042
VAL 1340.0041
GLU 1350.0041
THR 1360.0041
ASN 1370.0042
LEU 1380.0038
ALA 1390.0035
SER 1400.0032
LEU 1410.0030
GLU 1420.0032
ASN 1430.0038
PHE 1440.0039
PRO 1450.0042
ILE 1460.0040
GLY 1470.0039
HIS 1480.0043
LEU 1490.0043
LYS 1500.0042
THR 1510.0044
LEU 1520.0029
LYS 1530.0027
GLU 1540.0029
LEU 1550.0027
ASN 1560.0030
VAL 1570.0034
ALA 1580.0034
HIS 1590.0037
ASN 1600.0037
LEU 1610.0036
ILE 1620.0029
GLN 1630.0025
SER 1640.0020
PHE 1650.0012
LYS 1660.0015
LEU 1670.0012
PRO 1680.0020
GLU 1690.0018
TYR 1700.0022
PHE 1710.0017
SER 1720.0014
ASN 1730.0021
LEU 1740.0022
THR 1750.0021
ASN 1760.0027
LEU 1770.0017
GLU 1780.0024
HIS 1790.0025
LEU 1800.0017
ASP 1810.0022
LEU 1820.0021
SER 1830.0024
SER 1840.0029
ASN 1850.0026
LYS 1860.0025
ILE 1870.0016
GLN 1880.0015
SER 1890.0013
ILE 1900.0013
TYR 1910.0020
CYS 1920.0026
THR 1930.0026
ASP 1940.0017
LEU 1950.0015
ARG 1960.0020
VAL 1970.0012
LEU 1980.0014
HIS 1990.0023
GLN 2000.0020
MET 2010.0018
PRO 2020.0028
LEU 2030.0029
LEU 2040.0023
ASN 2050.0030
LEU 2060.0024
SER 2070.0027
LEU 2080.0020
ASP 2090.0021
LEU 2100.0014
SER 2110.0020
LEU 2120.0022
ASN 2130.0016
PRO 2140.0014
MET 2150.0009
ASN 2160.0009
PHE 2170.0014
ILE 2180.0016
GLN 2190.0025
PRO 2200.0033
GLY 2210.0036
ALA 2220.0028
PHE 2230.0030
LYS 2240.0040
GLU 2250.0043
ILE 2260.0034
ARG 2270.0039
LEU 2280.0035
HIS 2290.0041
LYS 2300.0036
LEU 2310.0029
THR 2320.0025
LEU 2330.0021
ARG 2340.0023
ASN 2350.0021
ASN 2360.0016
PHE 2370.0018
ASP 2380.0019
SER 2390.0020
LEU 2400.0022
ASN 2410.0019
VAL 2420.0015
MET 2430.0019
LYS 2440.0021
THR 2450.0019
CYS 2460.0018
ILE 2470.0026
GLN 2480.0028
GLY 2490.0026
LEU 2500.0029
ALA 2510.0036
GLY 2520.0043
LEU 2530.0040
GLU 2540.0044
VAL 2550.0042
HIS 2560.0047
ARG 2570.0041
LEU 2580.0036
VAL 2590.0033
LEU 2600.0028
GLY 2610.0026
GLU 2620.0026
PHE 2630.0029
ARG 2640.0034
ASN 2650.0031
GLU 2660.0025
GLY 2670.0025
ASN 2680.0026
LEU 2690.0026
GLU 2700.0027
LYS 2710.0028
PHE 2720.0027
ASP 2730.0027
LYS 2740.0026
SER 2750.0027
ALA 2760.0027
LEU 2770.0029
GLU 2780.0030
GLY 2790.0030
LEU 2800.0033
CYS 2810.0036
ASN 2820.0041
LEU 2830.0041
THR 2840.0045
ILE 2850.0044
GLU 2860.0048
GLU 2870.0043
PHE 2880.0036
ARG 2890.0033
LEU 2900.0028
ALA 2910.0028
TYR 2920.0027
LEU 2930.0028
ASP 2940.0033
TYR 2950.0034
TYR 2960.0032
LEU 2970.0022
ASP 2980.0022
GLY 2990.0021
ILE 3000.0021
ILE 3010.0022
ASP 3020.0024
LEU 3030.0025
PHE 3040.0026
ASN 3050.0026
CYS 3060.0030
LEU 3070.0031
THR 3080.0028
ASN 3090.0033
VAL 3100.0035
SER 3110.0036
SER 3120.0034
PHE 3130.0030
SER 3140.0029
LEU 3150.0026
VAL 3160.0028
SER 3170.0024
VAL 3180.0022
THR 3190.0019
ILE 3200.0017
GLU 3210.0015
ARG 3220.0020
VAL 3230.0019
LYS 3240.0021
ASP 3250.0021
PHE 3260.0019
SER 3270.0020
TYR 3280.0020
ASN 3290.0019
PHE 3300.0022
GLY 3310.0025
TRP 3320.0027
GLN 3330.0033
HIS 3340.0034
LEU 3350.0030
GLU 3360.0033
LEU 3370.0026
VAL 3380.0029
ASN 3390.0032
CYS 3400.0030
LYS 3410.0029
PHE 3420.0027
GLY 3430.0026
GLN 3440.0026
PHE 3450.0026
PRO 3460.0024
THR 3470.0026
LEU 3480.0025
LYS 3490.0024
LEU 3500.0024
LYS 3510.0023
SER 3520.0023
LEU 3530.0027
LYS 3540.0035
ARG 3550.0040
LEU 3560.0039
THR 3570.0034
PHE 3580.0033
THR 3590.0036
SER 3600.0038
ASN 3610.0036
LYS 3620.0038
GLY 3630.0036
GLY 3640.0032
ASN 3650.0029
ALA 3660.0026
PHE 3670.0031
SER 3680.0031
GLU 3690.0032
VAL 3700.0032
ASP 3710.0033
LEU 3720.0035
PRO 3730.0035
SER 3740.0035
LEU 3750.0036
GLU 3760.0038
PHE 3770.0035
LEU 3780.0035
ASP 3790.0037
LEU 3800.0037
SER 3810.0039
ARG 3820.0035
ASN 3830.0035
GLY 3840.0032
LEU 3850.0029
SER 3860.0025
PHE 3870.0025
LYS 3880.0024
GLY 3890.0021
CYS 3900.0020
CYS 3910.0021
SER 3920.0030
GLN 3930.0034
SER 3940.0035
ASP 3950.0034
PHE 3960.0036
GLY 3970.0043
THR 3980.0042
ILE 3990.0043
SER 4000.0041
LEU 4010.0039
LYS 4020.0033
TYR 4030.0033
LEU 4040.0030
ASP 4050.0030
LEU 4060.0028
SER 4070.0024
PHE 4080.0023
ASN 4090.0023
GLY 4100.0021
VAL 4110.0019
ILE 4120.0016
THR 4130.0015
MET 4140.0012
SER 4150.0016
SER 4160.0016
ASN 4170.0013
PHE 4180.0021
LEU 4190.0023
GLY 4200.0031
LEU 4210.0031
GLU 4220.0027
GLN 4230.0035
LEU 4240.0031
GLU 4250.0034
HIS 4260.0030
LEU 4270.0023
ASP 4280.0023
PHE 4290.0017
GLN 4300.0021
HIS 4310.0017
SER 4320.0015
ASN 4330.0009
LEU 4340.0009
LYS 4350.0011
GLN 4360.0013
MET 4370.0015
SER 4380.0022
GLU 4390.0019
PHE 4400.0016
SER 4410.0017
VAL 4420.0013
PHE 4430.0018
LEU 4440.0016
SER 4450.0018
LEU 4460.0025
ARG 4470.0028
ASN 4480.0037
LEU 4490.0033
ILE 4500.0043
TYR 4510.0038
LEU 4520.0032
ASP 4530.0033
ILE 4540.0028
SER 4550.0035
HIS 4560.0032
THR 4570.0027
HIS 4580.0027
THR 4590.0029
ARG 4600.0032
VAL 4610.0035
ALA 4620.0035
PHE 4630.0033
ASN 4640.0038
GLY 4650.0032
ILE 4660.0030
PHE 4670.0036
ASN 4680.0034
GLY 4690.0032
LEU 4700.0038
SER 4710.0043
SER 4720.0046
LEU 4730.0046
GLU 4740.0053
VAL 4750.0052
LEU 4760.0049
LYS 4770.0050
MET 4780.0049
ALA 4790.0053
GLY 4800.0052
ASN 4810.0048
SER 4820.0053
PHE 4830.0052
GLN 4840.0051
GLU 4850.0060
ASN 4860.0063
PHE 4870.0063
LEU 4880.0061
PRO 4890.0057
ASP 4900.0055
ILE 4910.0053
PHE 4920.0054
THR 4930.0054
GLU 4940.0051
LEU 4950.0053
ARG 4960.0055
ASN 4970.0056
LEU 4980.0058
THR 4990.0061
PHE 5000.0063
LEU 5010.0063
ASP 5020.0067
LEU 5030.0068
SER 5040.0072
GLN 5050.0073
CYS 5060.0071
GLN 5070.0075
LEU 5080.0073
GLU 5090.0075
GLN 5100.0072
LEU 5110.0068
SER 5120.0063
PRO 5130.0057
THR 5140.0058
ALA 5150.0062
PHE 5160.0059
ASN 5170.0057
SER 5180.0058
LEU 5190.0058
SER 5200.0055
SER 5210.0056
LEU 5220.0061
GLN 5230.0061
VAL 5240.0066
LEU 5250.0067
ASN 5260.0073
MET 5270.0076
SER 5280.0082
HIS 5290.0091
ASN 5300.0090
ASN 5310.0090
PHE 5320.0086
PHE 5330.0079
SER 5340.0064
LEU 5350.0050
ASP 5360.0052
THR 5370.0038
PHE 5380.0045
PRO 5390.0056
TYR 5400.0046
LYS 5410.0035
CYS 5420.0044
LEU 5430.0046
ASN 5440.0042
SER 5450.0048
LEU 5460.0051
GLN 5470.0058
VAL 5480.0065
LEU 5490.0061
ASP 5500.0071
TYR 5510.0067
SER 5520.0078
LEU 5530.0091
ASN 5540.0088
HIS 5550.0084
ILE 5560.0065
MET 5570.0061
THR 5580.0062
SER 5590.0056
LYS 5600.0085
LYS 5610.0081
GLN 5620.0070
GLU 5630.0051
LEU 5640.0033
GLN 5650.0028
HIS 5660.0013
PHE 5670.0023
PRO 5680.0024
SER 5690.0029
SER 5700.0037
LEU 5710.0040
ALA 5720.0067
PHE 5730.0068
LEU 5740.0051
ASN 5750.0064
LEU 5760.0050
THR 5770.0068
GLN 5780.0079
ASN 5790.0067
ASP 5800.0069
PHE 5810.0046
ALA 5820.0079
CYS 5830.0070
THR 5840.0113
CYS 5850.0142
GLU 5860.0149
HIS 5870.0101
GLN 5880.0105
SER 5890.0097
PHE 5900.0058
LEU 5910.0056
GLN 5920.0081
TRP 5930.0061
ILE 5940.0040
LYS 5950.0075
ASP 5960.0086
GLN 5970.0068
ARG 5980.0071
GLN 5990.0092
LEU 6000.0072
LEU 6010.0062
VAL 6020.0089
GLU 6030.0093
VAL 6040.0071
GLU 6050.0078
ARG 6060.0076
MET 6070.0045
GLU 6080.0032
CYS 6090.0034
ALA 6100.0070
THR 6110.0094
PRO 6120.0103
SER 6130.0100
ASP 6140.0082
LYS 6150.0053
GLN 6160.0054
GLY 6170.0035
MET 6180.0014
PRO 6190.0034
VAL 6200.0026
LEU 6210.0062
SER 6220.0079
LEU 6230.0075
ASN 6240.0120
ILE 6250.0134
THR 6260.0178
CYS 6270.0206
GLU 10.0187
ALA 20.0128
ALA 30.0106
ALA 40.0113
LYS 50.0074
MET 60.0018
GLN 70.0050
ARG 80.0107
LEU 90.0100
VAL 100.0113
LEU 110.0128
LEU 120.0148
LEU 130.0151
ALA 140.0144
ILE 150.0162
SER 160.0156
LEU 170.0145
LEU 180.0128
LEU 190.0128
TYR 200.0127
GLN 210.0093
ASP 220.0081
LEU 230.0079
PRO 240.0065
VAL 250.0075
ARG 260.0136
SER 270.0104
GLU 280.0155
PHE 290.0154
GLU 300.0096
LEU 310.0088
ASP 320.0119
ARG 330.0099
ILE 340.0077
CYS 350.0103
GLY 360.0074
TYR 370.0052
GLY 380.0057
THR 390.0075
ALA 400.0090
ARG 410.0103
CYS 420.0153
ARG 430.0172
LYS 440.0222
LYS 450.0202
CYS 460.0133
ARG 470.0095
SER 480.0076
GLN 490.0060
GLU 500.0092
TYR 510.0128
ARG 520.0175
ILE 530.0199
GLY 540.0237
ARG 550.0256
CYS 560.0223
PRO 570.0252
ASN 580.0266
THR 590.0294
TYR 600.0250
ALA 610.0202
CYS 620.0168
CYS 630.0136
LEU 640.0112
ARG 650.0080
LYS 660.0068
TRP 670.0066
ASP 680.0052
GLU 690.0060
SER 700.0048
LEU 710.0042
LEU 720.0051
ASN 730.0049
ARG 740.0040
THR 750.0045
LYS 760.0048
PRO 770.0046
GLU 780.0039
ALA 790.0046
ALA 800.0052
ALA 810.0179
LYS 820.0183
LYS 830.0183
GLU 840.0225
MET 850.0219
ASN 860.0225
LEU 870.0170
SER 880.0161
VAL 890.0111
GLY 900.0126
LEU 910.0106
GLY 920.0164
GLY 930.0192
GLY 940.0217
SER 950.0160
ASN 960.0168
LEU 970.0150
SER 980.0194
VAL 990.0197
GLY 1000.0250
LEU 1010.0221
GLY 1020.0260
GLU 1030.0224
ILE 1040.0275
GLY 1050.0275
GLY 1060.0303
GLY 1070.0262
SER 1080.0198
LYS 1090.0136
LEU 1100.0097
LEU 1110.0139
ASP 1120.0158
ILE 1130.0118
ASN 1140.0159
LEU 1150.0129
GLY 1160.0152
ARG 1170.0196
GLY 1180.0158
GLY 1190.0220
GLY 1200.0235
SER 1210.0139
MET 1220.0132
VAL 1230.0074
ASP 1240.0107
LEU 1250.0099
THR 1260.0133
PHE 1270.0149
GLY 1280.0182
GLY 1290.0199
VAL 1300.0216
GLY 1310.0157
GLY 1320.0154
GLY 1330.0146
SER 1340.0146
THR 1350.0139
PHE 1360.0147
THR 1370.0133
PHE 1380.0093
PHE 1390.0083
PRO 1400.0049
LEU 1410.0094
VAL 1420.0119
ILE 1430.0164
GLY 1440.0226
GLY 1450.0260
GLY 1460.0296
SER 1470.0264
ASP 1480.0212
ALA 1490.0191
MET 1500.0139
TYR 1510.0119
LEU 1520.0098
GLY 1530.0116
PHE 1540.0128
ALA 1550.0152
ALA 1560.0131
GLY 1570.0145
GLY 1580.0144
GLY 1590.0153
SER 1600.0152
ALA 1610.0163
GLY 1620.0186
GLY 1630.0181
GLU 1640.0178
ASN 1650.0146
HIS 1660.0129
VAL 1670.0074
ALA 1680.0094
PHE 1690.0089
GLY 1700.0147
PRO 1710.0313
GLY 1720.0293
PRO 1730.0245
GLY 1740.0140
VAL 1750.0065
ASP 1760.0090
LEU 1770.0092
THR 1780.0144
PHE 1790.0177
GLY 1800.0230
GLY 1810.0250
VAL 1820.0241
GLN 1830.0192
PHE 1840.0157
ALA 1850.0128
MET 1860.0054
VAL 1870.0077
ASN 1880.0142
ASN 1890.0244
GLY 1900.0317
PRO 1910.0300
GLY 1920.0126
PRO 1930.0326
GLY 1940.0362
GLU 1950.0182
SER 1960.0185
PHE 1970.0242
THR 1980.0270
ALA 1990.0359
GLN 2000.0389
PRO 2010.0208
ALA 2020.0130
ASP 2030.0210
MET 2040.0343
GLN 2050.0383
ALA 2060.0407
GLY 2070.0470
ILE 2080.0345
LYS 2090.0246
GLY 2100.0264
PRO 2110.0331
GLY 2120.0579
PRO 2130.0501
GLY 2140.0382
GLY 2150.0525
SER 2160.0816
ILE 2170.0442
GLN 2180.0291
VAL 2190.0126
ILE 2200.0717
ASN 2210.0476
GLY 2220.0376
SER 2230.0269
THR 2240.0160
ILE 2250.0150
GLY 2260.0255
THR 2270.0262
GLY 2280.0266
SER 2290.0228
LYS 2300.0192
LYS 2310.0131
THR 2320.0125
ILE 2330.0090
LEU 2340.0085
ILE 2350.0077
TYR 2360.0065
SER 2370.0059
ILE 2380.0071
ILE 2390.0045
GLY 2400.0060
VAL 2410.0065
LYS 2420.0048
LYS 2430.0050
GLY 2440.0059
THR 2450.0058
LEU 2460.0105
ALA 2470.0084
TRP 2480.0103
ALA 2490.0109
ARG 2500.0132
THR 2510.0125
GLY 2520.0197
PHE 2530.0190
SER 2540.0267
PRO 2550.0254
ALA 2560.0321
LYS 2570.0311
LYS 2580.0216
LEU 2590.0224
ASN 2600.0202
ALA 2610.0214
GLY 2620.0157
VAL 2630.0198
VAL 2640.0124
ARG 2650.0110
VAL 2660.0118
PHE 2670.0071
PHE 2680.0112
LEU 2690.0052
ASN 2700.0054
GLN 2710.0016
LYS 2720.0019
LYS 2730.0025
ALA 2740.0015
LYS 2750.0016
ASP 2760.0029
VAL 2770.0021
LEU 2780.0020
ARG 2790.0024
LYS 2800.0022
THR 2810.0025
SER 2820.0050
ARG 2830.0045
PRO 2840.0070
MET 2850.0058
VAL 2860.0085
ASP 2870.0099
LEU 2880.0033
THR 2890.0077
PHE 2900.0027
GLY 2910.0070
GLY 2920.0127

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.