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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0551
GLU 270.0117
PRO 280.0114
CYS 290.0066
VAL 300.0032
GLU 310.0034
VAL 320.0074
VAL 330.0113
PRO 340.0121
ASN 350.0140
ILE 360.0123
THR 370.0077
TYR 380.0024
GLN 390.0045
CYS 400.0067
MET 410.0110
GLU 420.0157
LEU 430.0161
ASN 440.0192
PHE 450.0162
TYR 460.0191
LYS 470.0163
ILE 480.0119
PRO 490.0118
ASP 500.0153
ASN 510.0147
LEU 520.0113
PRO 530.0139
PHE 540.0162
SER 550.0155
THR 560.0101
LYS 570.0103
ASN 580.0070
LEU 590.0022
ASP 600.0045
LEU 610.0068
SER 620.0104
PHE 630.0148
ASN 640.0146
PRO 650.0174
LEU 660.0141
ARG 670.0144
HIS 680.0130
LEU 690.0101
GLY 700.0118
SER 710.0111
TYR 720.0111
SER 730.0104
PHE 740.0086
PHE 750.0126
SER 760.0134
PHE 770.0103
PRO 780.0130
GLU 790.0126
LEU 800.0081
GLN 810.0090
VAL 820.0064
LEU 830.0031
ASP 840.0056
LEU 850.0069
SER 860.0107
ARG 870.0129
CYS 880.0118
GLU 890.0142
ILE 900.0114
GLN 910.0126
THR 920.0112
ILE 930.0082
GLU 940.0087
ASP 950.0074
GLY 960.0065
ALA 970.0068
TYR 980.0044
GLN 990.0071
SER 1000.0091
LEU 1010.0068
SER 1020.0084
HIS 1030.0093
LEU 1040.0059
SER 1050.0085
THR 1060.0075
LEU 1070.0056
ILE 1080.0072
LEU 1090.0077
THR 1100.0104
GLY 1110.0121
ASN 1120.0106
PRO 1130.0123
ILE 1140.0098
GLN 1150.0108
SER 1160.0086
LEU 1170.0076
ALA 1180.0062
LEU 1190.0036
GLY 1200.0030
ALA 1210.0036
PHE 1220.0012
SER 1230.0017
GLY 1240.0038
LEU 1250.0034
SER 1260.0062
SER 1270.0072
LEU 1280.0064
GLN 1290.0088
LYS 1300.0088
LEU 1310.0078
VAL 1320.0088
ALA 1330.0089
VAL 1340.0101
GLU 1350.0105
THR 1360.0094
ASN 1370.0095
LEU 1380.0092
ALA 1390.0096
SER 1400.0093
LEU 1410.0089
GLU 1420.0091
ASN 1430.0082
PHE 1440.0076
PRO 1450.0063
ILE 1460.0065
GLY 1470.0062
HIS 1480.0052
LEU 1490.0057
LYS 1500.0065
THR 1510.0071
LEU 1520.0080
LYS 1530.0090
GLU 1540.0091
LEU 1550.0090
ASN 1560.0094
VAL 1570.0091
ALA 1580.0093
HIS 1590.0093
ASN 1600.0091
LEU 1610.0091
ILE 1620.0086
GLN 1630.0083
SER 1640.0085
PHE 1650.0083
LYS 1660.0091
LEU 1670.0094
PRO 1680.0097
GLU 1690.0102
TYR 1700.0096
PHE 1710.0092
SER 1720.0094
ASN 1730.0085
LEU 1740.0084
THR 1750.0087
ASN 1760.0085
LEU 1770.0084
GLU 1780.0084
HIS 1790.0084
LEU 1800.0084
ASP 1810.0084
LEU 1820.0081
SER 1830.0077
SER 1840.0078
ASN 1850.0080
LYS 1860.0077
ILE 1870.0069
GLN 1880.0057
SER 1890.0051
ILE 1900.0054
TYR 1910.0056
CYS 1920.0071
THR 1930.0084
ASP 1940.0083
LEU 1950.0085
ARG 1960.0098
VAL 1970.0099
LEU 1980.0092
HIS 1990.0097
GLN 2000.0107
MET 2010.0102
PRO 2020.0097
LEU 2030.0102
LEU 2040.0094
ASN 2050.0084
LEU 2060.0074
SER 2070.0067
LEU 2080.0065
ASP 2090.0061
LEU 2100.0059
SER 2110.0055
LEU 2120.0054
ASN 2130.0059
PRO 2140.0058
MET 2150.0042
ASN 2160.0039
PHE 2170.0025
ILE 2180.0025
GLN 2190.0030
PRO 2200.0035
GLY 2210.0054
ALA 2220.0053
PHE 2230.0059
LYS 2240.0070
GLU 2250.0085
ILE 2260.0078
ARG 2270.0069
LEU 2280.0061
HIS 2290.0063
LYS 2300.0047
LEU 2310.0037
THR 2320.0036
LEU 2330.0029
ARG 2340.0031
ASN 2350.0043
ASN 2360.0038
PHE 2370.0051
ASP 2380.0077
SER 2390.0082
LEU 2400.0081
ASN 2410.0079
VAL 2420.0056
MET 2430.0047
LYS 2440.0059
THR 2450.0046
CYS 2460.0027
ILE 2470.0038
GLN 2480.0047
GLY 2490.0031
LEU 2500.0042
ALA 2510.0063
GLY 2520.0073
LEU 2530.0061
GLU 2540.0073
VAL 2550.0058
HIS 2560.0063
ARG 2570.0045
LEU 2580.0037
VAL 2590.0026
LEU 2600.0031
GLY 2610.0038
GLU 2620.0041
PHE 2630.0050
ARG 2640.0061
ASN 2650.0080
GLU 2660.0084
GLY 2670.0094
ASN 2680.0083
LEU 2690.0086
GLU 2700.0112
LYS 2710.0114
PHE 2720.0104
ASP 2730.0120
LYS 2740.0123
SER 2750.0109
ALA 2760.0086
LEU 2770.0085
GLU 2780.0098
GLY 2790.0081
LEU 2800.0081
CYS 2810.0103
ASN 2820.0092
LEU 2830.0080
THR 2840.0090
ILE 2850.0075
GLU 2860.0079
GLU 2870.0061
PHE 2880.0056
ARG 2890.0045
LEU 2900.0053
ALA 2910.0044
TYR 2920.0057
LEU 2930.0067
ASP 2940.0079
TYR 2950.0089
TYR 2960.0098
LEU 2970.0121
ASP 2980.0142
GLY 2990.0137
ILE 3000.0124
ILE 3010.0142
ASP 3020.0144
LEU 3030.0122
PHE 3040.0113
ASN 3050.0130
CYS 3060.0117
LEU 3070.0109
THR 3080.0125
ASN 3090.0122
VAL 3100.0100
SER 3110.0095
SER 3120.0072
PHE 3130.0073
SER 3140.0060
LEU 3150.0067
VAL 3160.0059
SER 3170.0071
VAL 3180.0084
THR 3190.0103
ILE 3200.0113
GLU 3210.0131
ARG 3220.0138
VAL 3230.0125
LYS 3240.0138
ASP 3250.0134
PHE 3260.0120
SER 3270.0136
TYR 3280.0142
ASN 3290.0138
PHE 3300.0125
GLY 3310.0121
TRP 3320.0101
GLN 3330.0087
HIS 3340.0066
LEU 3350.0068
GLU 3360.0055
LEU 3370.0067
VAL 3380.0061
ASN 3390.0069
CYS 3400.0079
LYS 3410.0092
PHE 3420.0099
GLY 3430.0111
GLN 3440.0105
PHE 3450.0093
PRO 3460.0095
THR 3470.0109
LEU 3480.0101
LYS 3490.0109
LEU 3500.0104
LYS 3510.0109
SER 3520.0102
LEU 3530.0082
LYS 3540.0067
ARG 3550.0051
LEU 3560.0051
THR 3570.0048
PHE 3580.0057
THR 3590.0054
SER 3600.0061
ASN 3610.0072
LYS 3620.0081
GLY 3630.0086
GLY 3640.0085
ASN 3650.0078
ALA 3660.0075
PHE 3670.0076
SER 3680.0083
GLU 3690.0080
VAL 3700.0078
ASP 3710.0081
LEU 3720.0072
PRO 3730.0072
SER 3740.0074
LEU 3750.0062
GLU 3760.0054
PHE 3770.0040
LEU 3780.0041
ASP 3790.0039
LEU 3800.0048
SER 3810.0046
ARG 3820.0050
ASN 3830.0059
GLY 3840.0063
LEU 3850.0063
SER 3860.0066
PHE 3870.0058
LYS 3880.0057
GLY 3890.0048
CYS 3900.0043
CYS 3910.0041
SER 3920.0044
GLN 3930.0052
SER 3940.0059
ASP 3950.0059
PHE 3960.0062
GLY 3970.0057
THR 3980.0055
ILE 3990.0049
SER 4000.0056
LEU 4010.0045
LYS 4020.0037
TYR 4030.0033
LEU 4040.0033
ASP 4050.0036
LEU 4060.0039
SER 4070.0037
PHE 4080.0047
ASN 4090.0050
GLY 4100.0054
VAL 4110.0050
ILE 4120.0045
THR 4130.0040
MET 4140.0031
SER 4150.0031
SER 4160.0030
ASN 4170.0022
PHE 4180.0030
LEU 4190.0036
GLY 4200.0045
LEU 4210.0039
GLU 4220.0036
GLN 4230.0038
LEU 4240.0031
GLU 4250.0024
HIS 4260.0024
LEU 4270.0023
ASP 4280.0028
PHE 4290.0031
GLN 4300.0036
HIS 4310.0044
SER 4320.0043
ASN 4330.0044
LEU 4340.0035
LYS 4350.0034
GLN 4360.0027
MET 4370.0022
SER 4380.0021
GLU 4390.0015
PHE 4400.0008
SER 4410.0007
VAL 4420.0012
PHE 4430.0011
LEU 4440.0013
SER 4450.0023
LEU 4460.0019
ARG 4470.0022
ASN 4480.0021
LEU 4490.0015
ILE 4500.0010
TYR 4510.0016
LEU 4520.0018
ASP 4530.0026
ILE 4540.0027
SER 4550.0034
HIS 4560.0040
THR 4570.0040
HIS 4580.0043
THR 4590.0034
ARG 4600.0037
VAL 4610.0031
ALA 4620.0035
PHE 4630.0028
ASN 4640.0030
GLY 4650.0021
ILE 4660.0018
PHE 4670.0014
ASN 4680.0013
GLY 4690.0012
LEU 4700.0008
SER 4710.0014
SER 4720.0008
LEU 4730.0007
GLU 4740.0013
VAL 4750.0020
LEU 4760.0023
LYS 4770.0029
MET 4780.0032
ALA 4790.0040
GLY 4800.0045
ASN 4810.0039
SER 4820.0047
PHE 4830.0046
GLN 4840.0049
GLU 4850.0056
ASN 4860.0055
PHE 4870.0052
LEU 4880.0046
PRO 4890.0043
ASP 4900.0039
ILE 4910.0033
PHE 4920.0028
THR 4930.0028
GLU 4940.0020
LEU 4950.0019
ARG 4960.0020
ASN 4970.0018
LEU 4980.0023
THR 4990.0026
PHE 5000.0031
LEU 5010.0033
ASP 5020.0037
LEU 5030.0040
SER 5040.0044
GLN 5050.0047
CYS 5060.0046
GLN 5070.0053
LEU 5080.0051
GLU 5090.0054
GLN 5100.0053
LEU 5110.0049
SER 5120.0048
PRO 5130.0046
THR 5140.0044
ALA 5150.0043
PHE 5160.0040
ASN 5170.0036
SER 5180.0034
LEU 5190.0033
SER 5200.0032
SER 5210.0031
LEU 5220.0037
GLN 5230.0038
VAL 5240.0040
LEU 5250.0041
ASN 5260.0043
MET 5270.0045
SER 5280.0045
HIS 5290.0047
ASN 5300.0049
ASN 5310.0050
PHE 5320.0042
PHE 5330.0035
SER 5340.0033
LEU 5350.0034
ASP 5360.0040
THR 5370.0037
PHE 5380.0042
PRO 5390.0046
TYR 5400.0044
LYS 5410.0045
CYS 5420.0041
LEU 5430.0041
ASN 5440.0041
SER 5450.0041
LEU 5460.0041
GLN 5470.0043
VAL 5480.0042
LEU 5490.0042
ASP 5500.0042
TYR 5510.0040
SER 5520.0037
LEU 5530.0040
ASN 5540.0039
HIS 5550.0032
ILE 5560.0027
MET 5570.0014
THR 5580.0018
SER 5590.0027
LYS 5600.0035
LYS 5610.0044
GLN 5620.0040
GLU 5630.0041
LEU 5640.0031
GLN 5650.0033
HIS 5660.0038
PHE 5670.0038
PRO 5680.0040
SER 5690.0040
SER 5700.0041
LEU 5710.0039
ALA 5720.0037
PHE 5730.0036
LEU 5740.0033
ASN 5750.0034
LEU 5760.0027
THR 5770.0030
GLN 5780.0036
ASN 5790.0026
ASP 5800.0019
PHE 5810.0008
ALA 5820.0022
CYS 5830.0038
THR 5840.0049
CYS 5850.0062
GLU 5860.0053
HIS 5870.0036
GLN 5880.0047
SER 5890.0048
PHE 5900.0029
LEU 5910.0025
GLN 5920.0036
TRP 5930.0029
ILE 5940.0012
LYS 5950.0023
ASP 5960.0030
GLN 5970.0018
ARG 5980.0005
GLN 5990.0011
LEU 6000.0023
LEU 6010.0018
VAL 6020.0030
GLU 6030.0036
VAL 6040.0026
GLU 6050.0042
ARG 6060.0044
MET 6070.0031
GLU 6080.0040
CYS 6090.0038
ALA 6100.0040
THR 6110.0037
PRO 6120.0059
SER 6130.0075
ASP 6140.0090
LYS 6150.0073
GLN 6160.0068
GLY 6170.0068
MET 6180.0063
PRO 6190.0049
VAL 6200.0034
LEU 6210.0035
SER 6220.0058
LEU 6230.0061
ASN 6240.0077
ILE 6250.0073
THR 6260.0093
CYS 6270.0122
GLU 10.0366
ALA 20.0280
ALA 30.0323
ALA 40.0350
LYS 50.0242
MET 60.0207
GLN 70.0288
ARG 80.0302
LEU 90.0237
VAL 100.0262
LEU 110.0295
LEU 120.0294
LEU 130.0276
ALA 140.0302
ILE 150.0337
SER 160.0305
LEU 170.0270
LEU 180.0235
LEU 190.0255
TYR 200.0262
GLN 210.0173
ASP 220.0139
LEU 230.0151
PRO 240.0149
VAL 250.0186
ARG 260.0201
SER 270.0152
GLU 280.0197
PHE 290.0212
GLU 300.0146
LEU 310.0087
ASP 320.0095
ARG 330.0070
ILE 340.0030
CYS 350.0042
GLY 360.0025
TYR 370.0017
GLY 380.0012
THR 390.0031
ALA 400.0045
ARG 410.0057
CYS 420.0106
ARG 430.0142
LYS 440.0199
LYS 450.0199
CYS 460.0154
ARG 470.0131
SER 480.0143
GLN 490.0124
GLU 500.0133
TYR 510.0161
ARG 520.0179
ILE 530.0180
GLY 540.0191
ARG 550.0192
CYS 560.0154
PRO 570.0171
ASN 580.0201
THR 590.0224
TYR 600.0194
ALA 610.0174
CYS 620.0136
CYS 630.0129
LEU 640.0116
ARG 650.0108
LYS 660.0116
TRP 670.0114
ASP 680.0107
GLU 690.0111
SER 700.0102
LEU 710.0089
LEU 720.0102
ASN 730.0108
ARG 740.0094
THR 750.0098
LYS 760.0094
PRO 770.0097
GLU 780.0102
ALA 790.0118
ALA 800.0112
ALA 810.0063
LYS 820.0052
LYS 830.0067
GLU 840.0082
MET 850.0095
ASN 860.0085
LEU 870.0078
SER 880.0040
VAL 890.0028
GLY 900.0011
LEU 910.0064
GLY 920.0106
GLY 930.0172
GLY 940.0162
SER 950.0124
ASN 960.0047
LEU 970.0035
SER 980.0018
VAL 990.0063
GLY 1000.0079
LEU 1010.0103
GLY 1020.0159
GLU 1030.0223
ILE 1040.0342
GLY 1050.0462
GLY 1060.0551
GLY 1070.0387
SER 1080.0277
LYS 1090.0134
LEU 1100.0133
LEU 1110.0157
ASP 1120.0157
ILE 1130.0127
ASN 1140.0160
LEU 1150.0156
GLY 1160.0203
ARG 1170.0279
GLY 1180.0235
GLY 1190.0190
GLY 1200.0093
SER 1210.0059
MET 1220.0022
VAL 1230.0041
ASP 1240.0052
LEU 1250.0087
THR 1260.0111
PHE 1270.0141
GLY 1280.0151
GLY 1290.0184
VAL 1300.0205
GLY 1310.0242
GLY 1320.0236
GLY 1330.0215
SER 1340.0212
THR 1350.0190
PHE 1360.0184
THR 1370.0178
PHE 1380.0145
PHE 1390.0158
PRO 1400.0139
LEU 1410.0194
VAL 1420.0227
ILE 1430.0239
GLY 1440.0300
GLY 1450.0318
GLY 1460.0285
SER 1470.0240
ASP 1480.0196
ALA 1490.0178
MET 1500.0160
TYR 1510.0152
LEU 1520.0145
GLY 1530.0175
PHE 1540.0181
ALA 1550.0214
ALA 1560.0195
GLY 1570.0177
GLY 1580.0169
GLY 1590.0166
SER 1600.0168
ALA 1610.0186
GLY 1620.0185
GLY 1630.0168
GLU 1640.0154
ASN 1650.0137
HIS 1660.0099
VAL 1670.0080
ALA 1680.0046
PHE 1690.0036
GLY 1700.0015
PRO 1710.0056
GLY 1720.0028
PRO 1730.0043
GLY 1740.0024
VAL 1750.0024
ASP 1760.0021
LEU 1770.0054
THR 1780.0090
PHE 1790.0124
GLY 1800.0162
GLY 1810.0172
VAL 1820.0113
GLN 1830.0081
PHE 1840.0027
ALA 1850.0078
MET 1860.0132
VAL 1870.0222
ASN 1880.0253
ASN 1890.0403
GLY 1900.0452
PRO 1910.0433
GLY 1920.0065
PRO 1930.0440
GLY 1940.0544
GLU 1950.0136
SER 1960.0225
PHE 1970.0248
THR 1980.0118
ALA 1990.0217
GLN 2000.0169
PRO 2010.0103
ALA 2020.0068
ASP 2030.0143
MET 2040.0124
GLN 2050.0191
ALA 2060.0238
GLY 2070.0158
ILE 2080.0154
LYS 2090.0110
GLY 2100.0096
PRO 2110.0088
GLY 2120.0154
PRO 2130.0141
GLY 2140.0076
GLY 2150.0131
SER 2160.0303
ILE 2170.0293
GLN 2180.0061
VAL 2190.0121
ILE 2200.0310
ASN 2210.0199
GLY 2220.0171
SER 2230.0165
THR 2240.0125
ILE 2250.0107
GLY 2260.0131
THR 2270.0174
GLY 2280.0172
SER 2290.0176
LYS 2300.0129
LYS 2310.0130
THR 2320.0130
ILE 2330.0100
LEU 2340.0130
ILE 2350.0128
TYR 2360.0123
SER 2370.0079
ILE 2380.0040
ILE 2390.0070
GLY 2400.0033
VAL 2410.0041
LYS 2420.0041
LYS 2430.0034
GLY 2440.0037
THR 2450.0046
LEU 2460.0170
ALA 2470.0187
TRP 2480.0206
ALA 2490.0223
ARG 2500.0244
THR 2510.0249
GLY 2520.0196
PHE 2530.0183
SER 2540.0162
PRO 2550.0139
ALA 2560.0210
LYS 2570.0215
LYS 2580.0220
LEU 2590.0243
ASN 2600.0256
ALA 2610.0284
GLY 2620.0226
VAL 2630.0232
VAL 2640.0200
ARG 2650.0212
VAL 2660.0201
PHE 2670.0173
PHE 2680.0138
LEU 2690.0110
ASN 2700.0148
GLN 2710.0048
LYS 2720.0040
LYS 2730.0055
ALA 2740.0040
LYS 2750.0022
ASP 2760.0034
VAL 2770.0020
LEU 2780.0022
ARG 2790.0032
LYS 2800.0029
THR 2810.0048
SER 2820.0080
ARG 2830.0054
PRO 2840.0077
MET 2850.0050
VAL 2860.0074
ASP 2870.0091
LEU 2880.0050
THR 2890.0070
PHE 2900.0040
GLY 2910.0058
GLY 2920.0085

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.