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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0506
GLU 270.0109
PRO 280.0100
CYS 290.0105
VAL 300.0141
GLU 310.0162
VAL 320.0180
VAL 330.0186
PRO 340.0184
ASN 350.0155
ILE 360.0142
THR 370.0136
TYR 380.0115
GLN 390.0112
CYS 400.0076
MET 410.0088
GLU 420.0080
LEU 430.0058
ASN 440.0041
PHE 450.0024
TYR 460.0029
LYS 470.0020
ILE 480.0010
PRO 490.0042
ASP 500.0063
ASN 510.0092
LEU 520.0095
PRO 530.0110
PHE 540.0090
SER 550.0100
THR 560.0093
LYS 570.0091
ASN 580.0095
LEU 590.0074
ASP 600.0080
LEU 610.0057
SER 620.0077
PHE 630.0080
ASN 640.0059
PRO 650.0061
LEU 660.0051
ARG 670.0067
HIS 680.0060
LEU 690.0048
GLY 700.0045
SER 710.0037
TYR 720.0023
SER 730.0016
PHE 740.0012
PHE 750.0016
SER 760.0033
PHE 770.0033
PRO 780.0028
GLU 790.0048
LEU 800.0050
GLN 810.0069
VAL 820.0072
LEU 830.0060
ASP 840.0068
LEU 850.0063
SER 860.0078
ARG 870.0081
CYS 880.0071
GLU 890.0080
ILE 900.0071
GLN 910.0079
THR 920.0068
ILE 930.0058
GLU 940.0054
ASP 950.0048
GLY 960.0037
ALA 970.0039
TYR 980.0035
GLN 990.0029
SER 1000.0016
LEU 1010.0029
SER 1020.0037
HIS 1030.0042
LEU 1040.0048
SER 1050.0058
THR 1060.0063
LEU 1070.0062
ILE 1080.0063
LEU 1090.0064
THR 1100.0067
GLY 1110.0070
ASN 1120.0071
PRO 1130.0075
ILE 1140.0069
GLN 1150.0071
SER 1160.0066
LEU 1170.0058
ALA 1180.0055
LEU 1190.0052
GLY 1200.0049
ALA 1210.0051
PHE 1220.0052
SER 1230.0050
GLY 1240.0046
LEU 1250.0050
SER 1260.0053
SER 1270.0062
LEU 1280.0056
GLN 1290.0054
LYS 1300.0049
LEU 1310.0046
VAL 1320.0050
ALA 1330.0047
VAL 1340.0044
GLU 1350.0044
THR 1360.0045
ASN 1370.0043
LEU 1380.0037
ALA 1390.0031
SER 1400.0033
LEU 1410.0033
GLU 1420.0044
ASN 1430.0044
PHE 1440.0043
PRO 1450.0055
ILE 1460.0054
GLY 1470.0055
HIS 1480.0061
LEU 1490.0058
LYS 1500.0062
THR 1510.0062
LEU 1520.0050
LYS 1530.0043
GLU 1540.0037
LEU 1550.0031
ASN 1560.0030
VAL 1570.0029
ALA 1580.0035
HIS 1590.0039
ASN 1600.0028
LEU 1610.0031
ILE 1620.0042
GLN 1630.0057
SER 1640.0057
PHE 1650.0051
LYS 1660.0053
LEU 1670.0042
PRO 1680.0050
GLU 1690.0062
TYR 1700.0058
PHE 1710.0045
SER 1720.0057
ASN 1730.0062
LEU 1740.0050
THR 1750.0054
ASN 1760.0052
LEU 1770.0031
GLU 1780.0029
HIS 1790.0031
LEU 1800.0024
ASP 1810.0035
LEU 1820.0036
SER 1830.0054
SER 1840.0061
ASN 1850.0050
LYS 1860.0061
ILE 1870.0072
GLN 1880.0090
SER 1890.0090
ILE 1900.0078
TYR 1910.0085
CYS 1920.0084
THR 1930.0082
ASP 1940.0065
LEU 1950.0056
ARG 1960.0065
VAL 1970.0054
LEU 1980.0042
HIS 1990.0054
GLN 2000.0059
MET 2010.0045
PRO 2020.0039
LEU 2030.0036
LEU 2040.0029
ASN 2050.0028
LEU 2060.0024
SER 2070.0039
LEU 2080.0043
ASP 2090.0057
LEU 2100.0063
SER 2110.0079
LEU 2120.0088
ASN 2130.0083
PRO 2140.0098
MET 2150.0095
ASN 2160.0109
PHE 2170.0105
ILE 2180.0093
GLN 2190.0097
PRO 2200.0101
GLY 2210.0088
ALA 2220.0078
PHE 2230.0067
LYS 2240.0070
GLU 2250.0054
ILE 2260.0047
ARG 2270.0039
LEU 2280.0043
HIS 2290.0046
LYS 2300.0058
LEU 2310.0066
THR 2320.0077
LEU 2330.0086
ARG 2340.0099
ASN 2350.0109
ASN 2360.0104
PHE 2370.0117
ASP 2380.0129
SER 2390.0130
LEU 2400.0124
ASN 2410.0125
VAL 2420.0123
MET 2430.0114
LYS 2440.0114
THR 2450.0113
CYS 2460.0103
ILE 2470.0101
GLN 2480.0103
GLY 2490.0094
LEU 2500.0084
ALA 2510.0085
GLY 2520.0071
LEU 2530.0067
GLU 2540.0057
VAL 2550.0062
HIS 2560.0061
ARG 2570.0071
LEU 2580.0079
VAL 2590.0088
LEU 2600.0096
GLY 2610.0107
GLU 2620.0112
PHE 2630.0119
ARG 2640.0133
ASN 2650.0134
GLU 2660.0128
GLY 2670.0135
ASN 2680.0129
LEU 2690.0126
GLU 2700.0136
LYS 2710.0129
PHE 2720.0111
ASP 2730.0107
LYS 2740.0098
SER 2750.0098
ALA 2760.0099
LEU 2770.0096
GLU 2780.0093
GLY 2790.0088
LEU 2800.0082
CYS 2810.0078
ASN 2820.0079
LEU 2830.0074
THR 2840.0066
ILE 2850.0072
GLU 2860.0070
GLU 2870.0075
PHE 2880.0080
ARG 2890.0086
LEU 2900.0091
ALA 2910.0097
TYR 2920.0109
LEU 2930.0107
ASP 2940.0111
TYR 2950.0105
TYR 2960.0099
LEU 2970.0077
ASP 2980.0068
GLY 2990.0066
ILE 3000.0070
ILE 3010.0066
ASP 3020.0074
LEU 3030.0082
PHE 3040.0078
ASN 3050.0071
CYS 3060.0074
LEU 3070.0075
THR 3080.0068
ASN 3090.0066
VAL 3100.0072
SER 3110.0071
SER 3120.0074
PHE 3130.0075
SER 3140.0079
LEU 3150.0080
VAL 3160.0085
SER 3170.0087
VAL 3180.0079
THR 3190.0075
ILE 3200.0064
GLU 3210.0059
ARG 3220.0053
VAL 3230.0054
LYS 3240.0047
ASP 3250.0050
PHE 3260.0052
SER 3270.0050
TYR 3280.0050
ASN 3290.0050
PHE 3300.0059
GLY 3310.0061
TRP 3320.0067
GLN 3330.0068
HIS 3340.0070
LEU 3350.0068
GLU 3360.0071
LEU 3370.0061
VAL 3380.0069
ASN 3390.0072
CYS 3400.0064
LYS 3410.0059
PHE 3420.0050
GLY 3430.0041
GLN 3440.0037
PHE 3450.0043
PRO 3460.0043
THR 3470.0046
LEU 3480.0050
LYS 3490.0046
LEU 3500.0051
LYS 3510.0050
SER 3520.0069
LEU 3530.0065
LYS 3540.0068
ARG 3550.0066
LEU 3560.0059
THR 3570.0058
PHE 3580.0053
THR 3590.0056
SER 3600.0055
ASN 3610.0050
LYS 3620.0043
GLY 3630.0030
GLY 3640.0018
ASN 3650.0025
ALA 3660.0029
PHE 3670.0042
SER 3680.0040
GLU 3690.0041
VAL 3700.0044
ASP 3710.0046
LEU 3720.0057
PRO 3730.0059
SER 3740.0067
LEU 3750.0069
GLU 3760.0077
PHE 3770.0061
LEU 3780.0056
ASP 3790.0055
LEU 3800.0050
SER 3810.0050
ARG 3820.0043
ASN 3830.0039
GLY 3840.0032
LEU 3850.0035
SER 3860.0035
PHE 3870.0038
LYS 3880.0037
GLY 3890.0042
CYS 3900.0045
CYS 3910.0049
SER 3920.0055
GLN 3930.0059
SER 3940.0052
ASP 3950.0050
PHE 3960.0056
GLY 3970.0074
THR 3980.0076
ILE 3990.0078
SER 4000.0079
LEU 4010.0080
LYS 4020.0072
TYR 4030.0066
LEU 4040.0059
ASP 4050.0055
LEU 4060.0049
SER 4070.0039
PHE 4080.0041
ASN 4090.0041
GLY 4100.0039
VAL 4110.0035
ILE 4120.0037
THR 4130.0034
MET 4140.0036
SER 4150.0040
SER 4160.0044
ASN 4170.0045
PHE 4180.0053
LEU 4190.0062
GLY 4200.0072
LEU 4210.0067
GLU 4220.0069
GLN 4230.0073
LEU 4240.0067
GLU 4250.0064
HIS 4260.0062
LEU 4270.0047
ASP 4280.0044
PHE 4290.0038
GLN 4300.0041
HIS 4310.0044
SER 4320.0040
ASN 4330.0033
LEU 4340.0029
LYS 4350.0025
GLN 4360.0025
MET 4370.0022
SER 4380.0023
GLU 4390.0029
PHE 4400.0032
SER 4410.0030
VAL 4420.0031
PHE 4430.0036
LEU 4440.0041
SER 4450.0053
LEU 4460.0049
ARG 4470.0049
ASN 4480.0055
LEU 4490.0049
ILE 4500.0049
TYR 4510.0051
LEU 4520.0037
ASP 4530.0043
ILE 4540.0033
SER 4550.0047
HIS 4560.0050
THR 4570.0044
HIS 4580.0042
THR 4590.0036
ARG 4600.0039
VAL 4610.0036
ALA 4620.0041
PHE 4630.0035
ASN 4640.0037
GLY 4650.0028
ILE 4660.0024
PHE 4670.0021
ASN 4680.0021
GLY 4690.0028
LEU 4700.0027
SER 4710.0025
SER 4720.0030
LEU 4730.0031
GLU 4740.0047
VAL 4750.0056
LEU 4760.0046
LYS 4770.0057
MET 4780.0054
ALA 4790.0071
GLY 4800.0075
ASN 4810.0061
SER 4820.0074
PHE 4830.0070
GLN 4840.0073
GLU 4850.0092
ASN 4860.0094
PHE 4870.0091
LEU 4880.0081
PRO 4890.0071
ASP 4900.0060
ILE 4910.0052
PHE 4920.0046
THR 4930.0041
GLU 4940.0026
LEU 4950.0037
ARG 4960.0039
ASN 4970.0042
LEU 4980.0053
THR 4990.0069
PHE 5000.0076
LEU 5010.0074
ASP 5020.0084
LEU 5030.0086
SER 5040.0098
GLN 5050.0103
CYS 5060.0095
GLN 5070.0109
LEU 5080.0106
GLU 5090.0113
GLN 5100.0108
LEU 5110.0100
SER 5120.0091
PRO 5130.0089
THR 5140.0083
ALA 5150.0084
PHE 5160.0081
ASN 5170.0074
SER 5180.0070
LEU 5190.0072
SER 5200.0073
SER 5210.0073
LEU 5220.0084
GLN 5230.0089
VAL 5240.0094
LEU 5250.0096
ASN 5260.0102
MET 5270.0109
SER 5280.0113
HIS 5290.0123
ASN 5300.0124
ASN 5310.0126
PHE 5320.0119
PHE 5330.0108
SER 5340.0100
LEU 5350.0092
ASP 5360.0103
THR 5370.0088
PHE 5380.0099
PRO 5390.0107
TYR 5400.0099
LYS 5410.0097
CYS 5420.0094
LEU 5430.0094
ASN 5440.0092
SER 5450.0092
LEU 5460.0092
GLN 5470.0089
VAL 5480.0094
LEU 5490.0097
ASP 5500.0101
TYR 5510.0100
SER 5520.0100
LEU 5530.0111
ASN 5540.0113
HIS 5550.0105
ILE 5560.0092
MET 5570.0079
THR 5580.0087
SER 5590.0091
LYS 5600.0123
LYS 5610.0128
GLN 5620.0111
GLU 5630.0101
LEU 5640.0073
GLN 5650.0063
HIS 5660.0076
PHE 5670.0079
PRO 5680.0082
SER 5690.0074
SER 5700.0079
LEU 5710.0075
ALA 5720.0059
PHE 5730.0071
LEU 5740.0068
ASN 5750.0078
LEU 5760.0068
THR 5770.0073
GLN 5780.0082
ASN 5790.0073
ASP 5800.0066
PHE 5810.0047
ALA 5820.0074
CYS 5830.0078
THR 5840.0129
CYS 5850.0169
GLU 5860.0177
HIS 5870.0122
GLN 5880.0124
SER 5890.0119
PHE 5900.0079
LEU 5910.0063
GLN 5920.0084
TRP 5930.0059
ILE 5940.0025
LYS 5950.0057
ASP 5960.0056
GLN 5970.0023
ARG 5980.0033
GLN 5990.0043
LEU 6000.0036
LEU 6010.0040
VAL 6020.0078
GLU 6030.0092
VAL 6040.0067
GLU 6050.0090
ARG 6060.0083
MET 6070.0046
GLU 6080.0034
CYS 6090.0017
ALA 6100.0029
THR 6110.0062
PRO 6120.0084
SER 6130.0056
ASP 6140.0091
LYS 6150.0076
GLN 6160.0030
GLY 6170.0054
MET 6180.0073
PRO 6190.0072
VAL 6200.0047
LEU 6210.0076
SER 6220.0124
LEU 6230.0116
ASN 6240.0162
ILE 6250.0163
THR 6260.0214
CYS 6270.0248
GLU 10.0479
ALA 20.0443
ALA 30.0497
ALA 40.0276
LYS 50.0152
MET 60.0351
GLN 70.0254
ARG 80.0189
LEU 90.0399
VAL 100.0475
LEU 110.0368
LEU 120.0463
LEU 130.0506
ALA 140.0426
ILE 150.0442
SER 160.0410
LEU 170.0340
LEU 180.0325
LEU 190.0336
TYR 200.0263
GLN 210.0187
ASP 220.0214
LEU 230.0192
PRO 240.0146
VAL 250.0102
ARG 260.0138
SER 270.0123
GLU 280.0131
PHE 290.0134
GLU 300.0112
LEU 310.0094
ASP 320.0093
ARG 330.0088
ILE 340.0077
CYS 350.0069
GLY 360.0068
TYR 370.0060
GLY 380.0065
THR 390.0069
ALA 400.0079
ARG 410.0065
CYS 420.0073
ARG 430.0071
LYS 440.0075
LYS 450.0064
CYS 460.0046
ARG 470.0045
SER 480.0050
GLN 490.0050
GLU 500.0050
TYR 510.0058
ARG 520.0059
ILE 530.0061
GLY 540.0068
ARG 550.0075
CYS 560.0082
PRO 570.0099
ASN 580.0104
THR 590.0094
TYR 600.0082
ALA 610.0063
CYS 620.0059
CYS 630.0056
LEU 640.0052
ARG 650.0051
LYS 660.0080
TRP 670.0087
ASP 680.0074
GLU 690.0084
SER 700.0071
LEU 710.0088
LEU 720.0096
ASN 730.0076
ARG 740.0074
THR 750.0093
LYS 760.0061
PRO 770.0048
GLU 780.0038
ALA 790.0026
ALA 800.0031
ALA 810.0088
LYS 820.0088
LYS 830.0083
GLU 840.0097
MET 850.0089
ASN 860.0075
LEU 870.0052
SER 880.0029
VAL 890.0018
GLY 900.0043
LEU 910.0085
GLY 920.0137
GLY 930.0189
GLY 940.0168
SER 950.0124
ASN 960.0051
LEU 970.0027
SER 980.0024
VAL 990.0055
GLY 1000.0084
LEU 1010.0100
GLY 1020.0116
GLU 1030.0116
ILE 1040.0134
GLY 1050.0145
GLY 1060.0151
GLY 1070.0138
SER 1080.0125
LYS 1090.0112
LEU 1100.0110
LEU 1110.0095
ASP 1120.0085
ILE 1130.0054
ASN 1140.0076
LEU 1150.0077
GLY 1160.0117
ARG 1170.0158
GLY 1180.0155
GLY 1190.0146
GLY 1200.0116
SER 1210.0081
MET 1220.0055
VAL 1230.0037
ASP 1240.0020
LEU 1250.0022
THR 1260.0031
PHE 1270.0039
GLY 1280.0044
GLY 1290.0050
VAL 1300.0058
GLY 1310.0044
GLY 1320.0042
GLY 1330.0044
SER 1340.0042
THR 1350.0045
PHE 1360.0059
THR 1370.0075
PHE 1380.0062
PHE 1390.0081
PRO 1400.0075
LEU 1410.0085
VAL 1420.0088
ILE 1430.0091
GLY 1440.0110
GLY 1450.0113
GLY 1460.0117
SER 1470.0106
ASP 1480.0082
ALA 1490.0075
MET 1500.0057
TYR 1510.0056
LEU 1520.0053
GLY 1530.0061
PHE 1540.0061
ALA 1550.0071
ALA 1560.0033
GLY 1570.0026
GLY 1580.0021
GLY 1590.0031
SER 1600.0046
ALA 1610.0024
GLY 1620.0028
GLY 1630.0031
GLU 1640.0037
ASN 1650.0034
HIS 1660.0026
VAL 1670.0019
ALA 1680.0016
PHE 1690.0029
GLY 1700.0039
PRO 1710.0068
GLY 1720.0072
PRO 1730.0073
GLY 1740.0044
VAL 1750.0025
ASP 1760.0012
LEU 1770.0018
THR 1780.0028
PHE 1790.0044
GLY 1800.0058
GLY 1810.0059
VAL 1820.0041
GLN 1830.0026
PHE 1840.0010
ALA 1850.0029
MET 1860.0058
VAL 1870.0116
ASN 1880.0143
ASN 1890.0209
GLY 1900.0236
PRO 1910.0179
GLY 1920.0098
PRO 1930.0152
GLY 1940.0211
GLU 1950.0061
SER 1960.0083
PHE 1970.0084
THR 1980.0054
ALA 1990.0078
GLN 2000.0070
PRO 2010.0028
ALA 2020.0053
ASP 2030.0087
MET 2040.0090
GLN 2050.0145
ALA 2060.0199
GLY 2070.0312
ILE 2080.0155
LYS 2090.0071
GLY 2100.0452
PRO 2110.0494
GLY 2120.0250
PRO 2130.0190
GLY 2140.0438
GLY 2150.0316
SER 2160.0325
ILE 2170.0298
GLN 2180.0231
VAL 2190.0144
ILE 2200.0205
ASN 2210.0217
GLY 2220.0186
SER 2230.0185
THR 2240.0167
ILE 2250.0139
GLY 2260.0069
THR 2270.0238
GLY 2280.0306
SER 2290.0390
LYS 2300.0249
LYS 2310.0105
THR 2320.0060
ILE 2330.0194
LEU 2340.0277
ILE 2350.0375
TYR 2360.0374
SER 2370.0303
ILE 2380.0264
ILE 2390.0232
GLY 2400.0184
VAL 2410.0109
LYS 2420.0077
LYS 2430.0066
GLY 2440.0116
THR 2450.0149
LEU 2460.0318
ALA 2470.0315
TRP 2480.0355
ALA 2490.0333
ARG 2500.0371
THR 2510.0349
GLY 2520.0266
PHE 2530.0192
SER 2540.0114
PRO 2550.0070
ALA 2560.0096
LYS 2570.0105
LYS 2580.0224
LEU 2590.0313
ASN 2600.0498
ALA 2610.0501
GLY 2620.0323
VAL 2630.0270
VAL 2640.0122
ARG 2650.0220
VAL 2660.0183
PHE 2670.0129
PHE 2680.0076
LEU 2690.0062
ASN 2700.0105
GLN 2710.0072
LYS 2720.0074
LYS 2730.0086
ALA 2740.0077
LYS 2750.0066
ASP 2760.0099
VAL 2770.0099
LEU 2780.0070
ARG 2790.0092
LYS 2800.0121
THR 2810.0096
SER 2820.0121
ARG 2830.0117
PRO 2840.0222
MET 2850.0319
VAL 2860.0385
ASP 2870.0293
LEU 2880.0165
THR 2890.0141
PHE 2900.0083
GLY 2910.0105
GLY 2920.0293

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.