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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2139
GLU 270.0026
PRO 280.0024
CYS 290.0031
VAL 300.0045
GLU 310.0053
VAL 320.0062
VAL 330.0067
PRO 340.0067
ASN 350.0061
ILE 360.0057
THR 370.0050
TYR 380.0040
GLN 390.0038
CYS 400.0026
MET 410.0034
GLU 420.0036
LEU 430.0030
ASN 440.0032
PHE 450.0023
TYR 460.0029
LYS 470.0021
ILE 480.0015
PRO 490.0017
ASP 500.0025
ASN 510.0030
LEU 520.0034
PRO 530.0044
PHE 540.0043
SER 550.0047
THR 560.0040
LYS 570.0039
ASN 580.0036
LEU 590.0027
ASP 600.0027
LEU 610.0020
SER 620.0027
PHE 630.0032
ASN 640.0028
PRO 650.0032
LEU 660.0025
ARG 670.0027
HIS 680.0025
LEU 690.0020
GLY 700.0024
SER 710.0024
TYR 720.0019
SER 730.0016
PHE 740.0017
PHE 750.0023
SER 760.0024
PHE 770.0024
PRO 780.0027
GLU 790.0030
LEU 800.0025
GLN 810.0027
VAL 820.0023
LEU 830.0018
ASP 840.0018
LEU 850.0017
SER 860.0022
ARG 870.0025
CYS 880.0024
GLU 890.0027
ILE 900.0023
GLN 910.0025
THR 920.0023
ILE 930.0019
GLU 940.0021
ASP 950.0021
GLY 960.0018
ALA 970.0016
TYR 980.0015
GLN 990.0017
SER 1000.0018
LEU 1010.0017
SER 1020.0015
HIS 1030.0016
LEU 1040.0014
SER 1050.0015
THR 1060.0016
LEU 1070.0012
ILE 1080.0010
LEU 1090.0010
THR 1100.0011
GLY 1110.0012
ASN 1120.0015
PRO 1130.0016
ILE 1140.0015
GLN 1150.0019
SER 1160.0022
LEU 1170.0013
ALA 1180.0016
LEU 1190.0017
GLY 1200.0018
ALA 1210.0015
PHE 1220.0013
SER 1230.0014
GLY 1240.0015
LEU 1250.0014
SER 1260.0015
SER 1270.0015
LEU 1280.0012
GLN 1290.0010
LYS 1300.0007
LEU 1310.0006
VAL 1320.0003
ALA 1330.0004
VAL 1340.0009
GLU 1350.0011
THR 1360.0007
ASN 1370.0015
LEU 1380.0017
ALA 1390.0026
SER 1400.0028
LEU 1410.0024
GLU 1420.0028
ASN 1430.0023
PHE 1440.0016
PRO 1450.0018
ILE 1460.0015
GLY 1470.0017
HIS 1480.0018
LEU 1490.0014
LYS 1500.0016
THR 1510.0015
LEU 1520.0010
LYS 1530.0006
GLU 1540.0004
LEU 1550.0005
ASN 1560.0012
VAL 1570.0016
ALA 1580.0024
HIS 1590.0029
ASN 1600.0027
LEU 1610.0034
ILE 1620.0036
GLN 1630.0046
SER 1640.0044
PHE 1650.0038
LYS 1660.0037
LEU 1670.0028
PRO 1680.0029
GLU 1690.0032
TYR 1700.0025
PHE 1710.0019
SER 1720.0021
ASN 1730.0021
LEU 1740.0013
THR 1750.0014
ASN 1760.0010
LEU 1770.0002
GLU 1780.0007
HIS 1790.0014
LEU 1800.0017
ASP 1810.0024
LEU 1820.0030
SER 1830.0038
SER 1840.0042
ASN 1850.0040
LYS 1860.0048
ILE 1870.0049
GLN 1880.0058
SER 1890.0056
ILE 1900.0049
TYR 1910.0050
CYS 1920.0048
THR 1930.0047
ASP 1940.0040
LEU 1950.0033
ARG 1960.0035
VAL 1970.0027
LEU 1980.0021
HIS 1990.0026
GLN 2000.0026
MET 2010.0016
PRO 2020.0014
LEU 2030.0006
LEU 2040.0003
ASN 2050.0009
LEU 2060.0014
SER 2070.0024
LEU 2080.0028
ASP 2090.0035
LEU 2100.0041
SER 2110.0048
LEU 2120.0052
ASN 2130.0051
PRO 2140.0059
MET 2150.0057
ASN 2160.0064
PHE 2170.0060
ILE 2180.0052
GLN 2190.0053
PRO 2200.0053
GLY 2210.0045
ALA 2220.0042
PHE 2230.0036
LYS 2240.0036
GLU 2250.0027
ILE 2260.0024
ARG 2270.0023
LEU 2280.0025
HIS 2290.0027
LYS 2300.0033
LEU 2310.0037
THR 2320.0044
LEU 2330.0049
ARG 2340.0053
ASN 2350.0058
ASN 2360.0056
PHE 2370.0060
ASP 2380.0063
SER 2390.0063
LEU 2400.0061
ASN 2410.0060
VAL 2420.0063
MET 2430.0060
LYS 2440.0059
THR 2450.0058
CYS 2460.0054
ILE 2470.0053
GLN 2480.0053
GLY 2490.0049
LEU 2500.0044
ALA 2510.0044
GLY 2520.0038
LEU 2530.0035
GLU 2540.0033
VAL 2550.0035
HIS 2560.0037
ARG 2570.0041
LEU 2580.0043
VAL 2590.0046
LEU 2600.0050
GLY 2610.0054
GLU 2620.0056
PHE 2630.0058
ARG 2640.0060
ASN 2650.0061
GLU 2660.0060
GLY 2670.0060
ASN 2680.0059
LEU 2690.0058
GLU 2700.0061
LYS 2710.0059
PHE 2720.0054
ASP 2730.0054
LYS 2740.0053
SER 2750.0051
ALA 2760.0051
LEU 2770.0050
GLU 2780.0051
GLY 2790.0046
LEU 2800.0045
CYS 2810.0047
ASN 2820.0045
LEU 2830.0041
THR 2840.0040
ILE 2850.0043
GLU 2860.0045
GLU 2870.0045
PHE 2880.0045
ARG 2890.0046
LEU 2900.0048
ALA 2910.0048
TYR 2920.0052
LEU 2930.0050
ASP 2940.0046
TYR 2950.0045
TYR 2960.0043
LEU 2970.0041
ASP 2980.0043
GLY 2990.0044
ILE 3000.0045
ILE 3010.0048
ASP 3020.0051
LEU 3030.0049
PHE 3040.0049
ASN 3050.0050
CYS 3060.0048
LEU 3070.0048
THR 3080.0051
ASN 3090.0051
VAL 3100.0048
SER 3110.0049
SER 3120.0047
PHE 3130.0045
SER 3140.0043
LEU 3150.0042
VAL 3160.0041
SER 3170.0039
VAL 3180.0037
THR 3190.0037
ILE 3200.0037
GLU 3210.0039
ARG 3220.0043
VAL 3230.0041
LYS 3240.0046
ASP 3250.0045
PHE 3260.0043
SER 3270.0049
TYR 3280.0050
ASN 3290.0051
PHE 3300.0049
GLY 3310.0051
TRP 3320.0049
GLN 3330.0050
HIS 3340.0046
LEU 3350.0045
GLU 3360.0042
LEU 3370.0031
VAL 3380.0030
ASN 3390.0028
CYS 3400.0028
LYS 3410.0028
PHE 3420.0028
GLY 3430.0031
GLN 3440.0032
PHE 3450.0030
PRO 3460.0030
THR 3470.0039
LEU 3480.0039
LYS 3490.0043
LEU 3500.0044
LYS 3510.0048
SER 3520.0049
LEU 3530.0044
LYS 3540.0043
ARG 3550.0038
LEU 3560.0035
THR 3570.0026
PHE 3580.0023
THR 3590.0020
SER 3600.0020
ASN 3610.0020
LYS 3620.0021
GLY 3630.0017
GLY 3640.0017
ASN 3650.0019
ALA 3660.0020
PHE 3670.0024
SER 3680.0028
GLU 3690.0027
VAL 3700.0027
ASP 3710.0032
LEU 3720.0033
PRO 3730.0038
SER 3740.0037
LEU 3750.0030
GLU 3760.0029
PHE 3770.0022
LEU 3780.0017
ASP 3790.0013
LEU 3800.0011
SER 3810.0010
ARG 3820.0014
ASN 3830.0011
GLY 3840.0017
LEU 3850.0016
SER 3860.0022
PHE 3870.0029
LYS 3880.0035
GLY 3890.0034
CYS 3900.0027
CYS 3910.0023
SER 3920.0022
GLN 3930.0021
SER 3940.0027
ASP 3950.0024
PHE 3960.0021
GLY 3970.0022
THR 3980.0019
ILE 3990.0017
SER 4000.0018
LEU 4010.0013
LYS 4020.0010
TYR 4030.0005
LEU 4040.0007
ASP 4050.0011
LEU 4060.0019
SER 4070.0021
PHE 4080.0026
ASN 4090.0027
GLY 4100.0034
VAL 4110.0038
ILE 4120.0036
THR 4130.0037
MET 4140.0032
SER 4150.0032
SER 4160.0026
ASN 4170.0019
PHE 4180.0016
LEU 4190.0018
GLY 4200.0018
LEU 4210.0012
GLU 4220.0007
GLN 4230.0006
LEU 4240.0005
GLU 4250.0005
HIS 4260.0011
LEU 4270.0020
ASP 4280.0026
PHE 4290.0033
GLN 4300.0037
HIS 4310.0044
SER 4320.0042
ASN 4330.0045
LEU 4340.0039
LYS 4350.0040
GLN 4360.0036
MET 4370.0030
SER 4380.0026
GLU 4390.0021
PHE 4400.0014
SER 4410.0013
VAL 4420.0021
PHE 4430.0017
LEU 4440.0009
SER 4450.0007
LEU 4460.0010
ARG 4470.0006
ASN 4480.0010
LEU 4490.0017
ILE 4500.0025
TYR 4510.0030
LEU 4520.0030
ASP 4530.0037
ILE 4540.0036
SER 4550.0043
HIS 4560.0047
THR 4570.0051
HIS 4580.0050
THR 4590.0041
ARG 4600.0039
VAL 4610.0034
ALA 4620.0036
PHE 4630.0029
ASN 4640.0035
GLY 4650.0026
ILE 4660.0031
PHE 4670.0033
ASN 4680.0024
GLY 4690.0018
LEU 4700.0027
SER 4710.0027
SER 4720.0028
LEU 4730.0034
GLU 4740.0046
VAL 4750.0051
LEU 4760.0047
LYS 4770.0051
MET 4780.0049
ALA 4790.0061
GLY 4800.0063
ASN 4810.0051
SER 4820.0073
PHE 4830.0066
GLN 4840.0063
GLU 4850.0080
ASN 4860.0088
PHE 4870.0089
LEU 4880.0083
PRO 4890.0076
ASP 4900.0069
ILE 4910.0063
PHE 4920.0059
THR 4930.0056
GLU 4940.0045
LEU 4950.0050
ARG 4960.0051
ASN 4970.0052
LEU 4980.0059
THR 4990.0067
PHE 5000.0071
LEU 5010.0071
ASP 5020.0076
LEU 5030.0076
SER 5040.0084
GLN 5050.0084
CYS 5060.0076
GLN 5070.0104
LEU 5080.0102
GLU 5090.0109
GLN 5100.0105
LEU 5110.0099
SER 5120.0095
PRO 5130.0092
THR 5140.0089
ALA 5150.0089
PHE 5160.0084
ASN 5170.0078
SER 5180.0076
LEU 5190.0075
SER 5200.0072
SER 5210.0071
LEU 5220.0079
GLN 5230.0081
VAL 5240.0086
LEU 5250.0089
ASN 5260.0094
MET 5270.0101
SER 5280.0105
HIS 5290.0114
ASN 5300.0116
ASN 5310.0121
PHE 5320.0123
PHE 5330.0115
SER 5340.0105
LEU 5350.0095
ASP 5360.0105
THR 5370.0085
PHE 5380.0097
PRO 5390.0105
TYR 5400.0093
LYS 5410.0090
CYS 5420.0086
LEU 5430.0084
ASN 5440.0079
SER 5450.0078
LEU 5460.0079
GLN 5470.0074
VAL 5480.0082
LEU 5490.0089
ASP 5500.0095
TYR 5510.0097
SER 5520.0099
LEU 5530.0114
ASN 5540.0117
HIS 5550.0112
ILE 5560.0097
MET 5570.0080
THR 5580.0085
SER 5590.0094
LYS 5600.0126
LYS 5610.0137
GLN 5620.0121
GLU 5630.0108
LEU 5640.0081
GLN 5650.0074
HIS 5660.0075
PHE 5670.0070
PRO 5680.0069
SER 5690.0057
SER 5700.0059
LEU 5710.0059
ALA 5720.0043
PHE 5730.0058
LEU 5740.0061
ASN 5750.0074
LEU 5760.0068
THR 5770.0080
GLN 5780.0098
ASN 5790.0086
ASP 5800.0080
PHE 5810.0051
ALA 5820.0046
CYS 5830.0033
THR 5840.0076
CYS 5850.0126
GLU 5860.0138
HIS 5870.0098
GLN 5880.0107
SER 5890.0119
PHE 5900.0078
LEU 5910.0052
GLN 5920.0086
TRP 5930.0072
ILE 5940.0030
LYS 5950.0068
ASP 5960.0080
GLN 5970.0045
ARG 5980.0042
GLN 5990.0041
LEU 6000.0018
LEU 6010.0034
VAL 6020.0067
GLU 6030.0092
VAL 6040.0073
GLU 6050.0104
ARG 6060.0103
MET 6070.0069
GLU 6080.0074
CYS 6090.0044
ALA 6100.0065
THR 6110.0048
PRO 6120.0018
SER 6130.0061
ASP 6140.0083
LYS 6150.0077
GLN 6160.0086
GLY 6170.0112
MET 6180.0103
PRO 6190.0096
VAL 6200.0055
LEU 6210.0084
SER 6220.0132
LEU 6230.0110
ASN 6240.0146
ILE 6250.0149
THR 6260.0190
CYS 6270.0221
GLU 10.0183
ALA 20.0184
ALA 30.0169
ALA 40.0082
LYS 50.0068
MET 60.0126
GLN 70.0084
ARG 80.0079
LEU 90.0149
VAL 100.0177
LEU 110.0144
LEU 120.0175
LEU 130.0180
ALA 140.0153
ILE 150.0165
SER 160.0144
LEU 170.0112
LEU 180.0105
LEU 190.0110
TYR 200.0077
GLN 210.0044
ASP 220.0069
LEU 230.0054
PRO 240.0062
VAL 250.0049
ARG 260.0056
SER 270.0056
GLU 280.0057
PHE 290.0054
GLU 300.0055
LEU 310.0055
ASP 320.0055
ARG 330.0053
ILE 340.0059
CYS 350.0066
GLY 360.0048
TYR 370.0039
GLY 380.0052
THR 390.0060
ALA 400.0066
ARG 410.0057
CYS 420.0064
ARG 430.0059
LYS 440.0076
LYS 450.0074
CYS 460.0063
ARG 470.0045
SER 480.0043
GLN 490.0038
GLU 500.0054
TYR 510.0072
ARG 520.0092
ILE 530.0108
GLY 540.0121
ARG 550.0122
CYS 560.0105
PRO 570.0113
ASN 580.0101
THR 590.0119
TYR 600.0097
ALA 610.0086
CYS 620.0081
CYS 630.0068
LEU 640.0069
ARG 650.0056
LYS 660.0052
TRP 670.0054
ASP 680.0044
GLU 690.0044
SER 700.0040
LEU 710.0047
LEU 720.0049
ASN 730.0041
ARG 740.0046
THR 750.0054
LYS 760.0035
PRO 770.0031
GLU 780.0030
ALA 790.0024
ALA 800.0026
ALA 810.0066
LYS 820.0072
LYS 830.0073
GLU 840.0083
MET 850.0085
ASN 860.0076
LEU 870.0062
SER 880.0056
VAL 890.0041
GLY 900.0041
LEU 910.0034
GLY 920.0047
GLY 930.0068
GLY 940.0075
SER 950.0057
ASN 960.0053
LEU 970.0042
SER 980.0058
VAL 990.0060
GLY 1000.0078
LEU 1010.0072
GLY 1020.0082
GLU 1030.0095
ILE 1040.0099
GLY 1050.0112
GLY 1060.0109
GLY 1070.0087
SER 1080.0058
LYS 1090.0055
LEU 1100.0061
LEU 1110.0061
ASP 1120.0049
ILE 1130.0032
ASN 1140.0032
LEU 1150.0039
GLY 1160.0118
ARG 1170.0184
GLY 1180.0168
GLY 1190.0138
GLY 1200.0070
SER 1210.0023
MET 1220.0024
VAL 1230.0021
ASP 1240.0026
LEU 1250.0028
THR 1260.0036
PHE 1270.0041
GLY 1280.0045
GLY 1290.0047
VAL 1300.0052
GLY 1310.0048
GLY 1320.0047
GLY 1330.0054
SER 1340.0050
THR 1350.0058
PHE 1360.0062
THR 1370.0065
PHE 1380.0051
PHE 1390.0056
PRO 1400.0045
LEU 1410.0089
VAL 1420.0106
ILE 1430.0162
GLY 1440.0218
GLY 1450.0271
GLY 1460.0235
SER 1470.0173
ASP 1480.0110
ALA 1490.0099
MET 1500.0074
TYR 1510.0087
LEU 1520.0062
GLY 1530.0072
PHE 1540.0067
ALA 1550.0078
ALA 1560.0048
GLY 1570.0053
GLY 1580.0046
GLY 1590.0056
SER 1600.0063
ALA 1610.0063
GLY 1620.0060
GLY 1630.0053
GLU 1640.0047
ASN 1650.0044
HIS 1660.0031
VAL 1670.0029
ALA 1680.0023
PHE 1690.0020
GLY 1700.0017
PRO 1710.0120
GLY 1720.0120
PRO 1730.0108
GLY 1740.0069
VAL 1750.0034
ASP 1760.0030
LEU 1770.0038
THR 1780.0043
PHE 1790.0052
GLY 1800.0059
GLY 1810.0066
VAL 1820.0068
GLN 1830.0056
PHE 1840.0055
ALA 1850.0049
MET 1860.0043
VAL 1870.0101
ASN 1880.0139
ASN 1890.0188
GLY 1900.0223
PRO 1910.0196
GLY 1920.0167
PRO 1930.0147
GLY 1940.0110
GLU 1950.0068
SER 1960.0070
PHE 1970.0087
THR 1980.0043
ALA 1990.0064
GLN 2000.0088
PRO 2010.0026
ALA 2020.0074
ASP 2030.0102
MET 2040.0102
GLN 2050.0063
ALA 2060.0103
GLY 2070.0104
ILE 2080.0055
LYS 2090.0030
GLY 2100.0170
PRO 2110.0211
GLY 2120.0072
PRO 2130.0131
GLY 2140.0181
GLY 2150.0091
SER 2160.0065
ILE 2170.0092
GLN 2180.0070
VAL 2190.0051
ILE 2200.0163
ASN 2210.0137
GLY 2220.0096
SER 2230.0055
THR 2240.0046
ILE 2250.0037
GLY 2260.0085
THR 2270.0059
GLY 2280.0036
SER 2290.0044
LYS 2300.0043
LYS 2310.0061
THR 2320.0067
ILE 2330.0069
LEU 2340.0082
ILE 2350.0103
TYR 2360.0072
SER 2370.0031
ILE 2380.0032
ILE 2390.0035
GLY 2400.0060
VAL 2410.0007
LYS 2420.0005
LYS 2430.0009
GLY 2440.0013
THR 2450.0011
LEU 2460.0048
ALA 2470.0063
TRP 2480.0083
ALA 2490.0095
ARG 2500.0112
THR 2510.0113
GLY 2520.0093
PHE 2530.0060
SER 2540.0055
PRO 2550.0068
ALA 2560.0147
LYS 2570.0174
LYS 2580.0071
LEU 2590.0150
ASN 2600.0228
ALA 2610.0391
GLY 2620.0274
VAL 2630.0260
VAL 2640.0224
ARG 2650.0119
VAL 2660.0115
PHE 2670.0082
PHE 2680.0099
LEU 2690.0074
ASN 2700.0067
GLN 2710.0036
LYS 2720.0060
LYS 2730.0122
ALA 2740.0128
LYS 2750.0160
ASP 2760.0254
VAL 2770.0266
LEU 2780.0293
ARG 2790.0383
LYS 2800.0409
THR 2810.0405
SER 2820.0411
ARG 2830.0325
PRO 2840.0329
MET 2850.0302
VAL 2860.0853
ASP 2870.0797
LEU 2880.0197
THR 2890.0985
PHE 2900.0720
GLY 2910.0647
GLY 2920.2139

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.