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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0877
GLU 270.0049
PRO 280.0051
CYS 290.0038
VAL 300.0027
GLU 310.0016
VAL 320.0011
VAL 330.0012
PRO 340.0021
ASN 350.0027
ILE 360.0016
THR 370.0007
TYR 380.0016
GLN 390.0027
CYS 400.0037
MET 410.0046
GLU 420.0058
LEU 430.0059
ASN 440.0066
PHE 450.0058
TYR 460.0063
LYS 470.0059
ILE 480.0046
PRO 490.0045
ASP 500.0048
ASN 510.0048
LEU 520.0037
PRO 530.0035
PHE 540.0036
SER 550.0029
THR 560.0016
LYS 570.0010
ASN 580.0010
LEU 590.0015
ASP 600.0026
LEU 610.0035
SER 620.0042
PHE 630.0053
ASN 640.0053
PRO 650.0060
LEU 660.0051
ARG 670.0052
HIS 680.0050
LEU 690.0042
GLY 700.0044
SER 710.0039
TYR 720.0035
SER 730.0039
PHE 740.0028
PHE 750.0030
SER 760.0033
PHE 770.0022
PRO 780.0020
GLU 790.0016
LEU 800.0007
GLN 810.0012
VAL 820.0016
LEU 830.0019
ASP 840.0026
LEU 850.0033
SER 860.0040
ARG 870.0044
CYS 880.0043
GLU 890.0049
ILE 900.0045
GLN 910.0049
THR 920.0049
ILE 930.0042
GLU 940.0042
ASP 950.0039
GLY 960.0032
ALA 970.0034
TYR 980.0025
GLN 990.0021
SER 1000.0017
LEU 1010.0011
SER 1020.0009
HIS 1030.0009
LEU 1040.0013
SER 1050.0021
THR 1060.0025
LEU 1070.0026
ILE 1080.0029
LEU 1090.0032
THR 1100.0036
GLY 1110.0039
ASN 1120.0038
PRO 1130.0043
ILE 1140.0042
GLN 1150.0047
SER 1160.0045
LEU 1170.0043
ALA 1180.0044
LEU 1190.0042
GLY 1200.0037
ALA 1210.0035
PHE 1220.0031
SER 1230.0028
GLY 1240.0022
LEU 1250.0021
SER 1260.0019
SER 1270.0023
LEU 1280.0026
GLN 1290.0029
LYS 1300.0030
LEU 1310.0032
VAL 1320.0031
ALA 1330.0033
VAL 1340.0033
GLU 1350.0033
THR 1360.0034
ASN 1370.0031
LEU 1380.0031
ALA 1390.0032
SER 1400.0032
LEU 1410.0031
GLU 1420.0037
ASN 1430.0036
PHE 1440.0036
PRO 1450.0037
ILE 1460.0037
GLY 1470.0041
HIS 1480.0038
LEU 1490.0034
LYS 1500.0035
THR 1510.0032
LEU 1520.0034
LYS 1530.0034
GLU 1540.0033
LEU 1550.0034
ASN 1560.0033
VAL 1570.0028
ALA 1580.0029
HIS 1590.0031
ASN 1600.0029
LEU 1610.0029
ILE 1620.0025
GLN 1630.0025
SER 1640.0025
PHE 1650.0026
LYS 1660.0027
LEU 1670.0033
PRO 1680.0035
GLU 1690.0040
TYR 1700.0041
PHE 1710.0039
SER 1720.0044
ASN 1730.0042
LEU 1740.0038
THR 1750.0039
ASN 1760.0035
LEU 1770.0033
GLU 1780.0032
HIS 1790.0030
LEU 1800.0030
ASP 1810.0029
LEU 1820.0024
SER 1830.0026
SER 1840.0031
ASN 1850.0029
LYS 1860.0032
ILE 1870.0031
GLN 1880.0036
SER 1890.0035
ILE 1900.0032
TYR 1910.0036
CYS 1920.0038
THR 1930.0033
ASP 1940.0027
LEU 1950.0033
ARG 1960.0038
VAL 1970.0034
LEU 1980.0036
HIS 1990.0042
GLN 2000.0046
MET 2010.0046
PRO 2020.0041
LEU 2030.0039
LEU 2040.0030
ASN 2050.0026
LEU 2060.0020
SER 2070.0016
LEU 2080.0018
ASP 2090.0020
LEU 2100.0023
SER 2110.0026
LEU 2120.0032
ASN 2130.0033
PRO 2140.0042
MET 2150.0040
ASN 2160.0050
PHE 2170.0047
ILE 2180.0043
GLN 2190.0048
PRO 2200.0055
GLY 2210.0054
ALA 2220.0042
PHE 2230.0040
LYS 2240.0050
GLU 2250.0050
ILE 2260.0039
ARG 2270.0026
LEU 2280.0017
HIS 2290.0012
LYS 2300.0010
LEU 2310.0015
THR 2320.0019
LEU 2330.0025
ARG 2340.0029
ASN 2350.0036
ASN 2360.0036
PHE 2370.0048
ASP 2380.0057
SER 2390.0060
LEU 2400.0059
ASN 2410.0065
VAL 2420.0058
MET 2430.0051
LYS 2440.0056
THR 2450.0058
CYS 2460.0049
ILE 2470.0047
GLN 2480.0054
GLY 2490.0047
LEU 2500.0042
ALA 2510.0050
GLY 2520.0046
LEU 2530.0034
GLU 2540.0028
VAL 2550.0017
HIS 2560.0010
ARG 2570.0012
LEU 2580.0015
VAL 2590.0016
LEU 2600.0022
GLY 2610.0026
GLU 2620.0033
PHE 2630.0035
ARG 2640.0039
ASN 2650.0047
GLU 2660.0048
GLY 2670.0054
ASN 2680.0050
LEU 2690.0052
GLU 2700.0060
LYS 2710.0058
PHE 2720.0045
ASP 2730.0047
LYS 2740.0046
SER 2750.0050
ALA 2760.0045
LEU 2770.0041
GLU 2780.0047
GLY 2790.0045
LEU 2800.0038
CYS 2810.0043
ASN 2820.0042
LEU 2830.0034
THR 2840.0028
ILE 2850.0020
GLU 2860.0017
GLU 2870.0017
PHE 2880.0016
ARG 2890.0016
LEU 2900.0016
ALA 2910.0016
TYR 2920.0027
LEU 2930.0031
ASP 2940.0034
TYR 2950.0035
TYR 2960.0028
LEU 2970.0020
ASP 2980.0018
GLY 2990.0019
ILE 3000.0023
ILE 3010.0025
ASP 3020.0031
LEU 3030.0028
PHE 3040.0025
ASN 3050.0029
CYS 3060.0031
LEU 3070.0025
THR 3080.0027
ASN 3090.0033
VAL 3100.0027
SER 3110.0027
SER 3120.0021
PHE 3130.0019
SER 3140.0018
LEU 3150.0017
VAL 3160.0016
SER 3170.0016
VAL 3180.0018
THR 3190.0016
ILE 3200.0017
GLU 3210.0015
ARG 3220.0020
VAL 3230.0025
LYS 3240.0028
ASP 3250.0028
PHE 3260.0032
SER 3270.0029
TYR 3280.0030
ASN 3290.0035
PHE 3300.0033
GLY 3310.0037
TRP 3320.0032
GLN 3330.0034
HIS 3340.0030
LEU 3350.0026
GLU 3360.0022
LEU 3370.0027
VAL 3380.0028
ASN 3390.0028
CYS 3400.0027
LYS 3410.0027
PHE 3420.0032
GLY 3430.0032
GLN 3440.0038
PHE 3450.0042
PRO 3460.0044
THR 3470.0037
LEU 3480.0039
LYS 3490.0041
LEU 3500.0042
LYS 3510.0045
SER 3520.0041
LEU 3530.0037
LYS 3540.0036
ARG 3550.0032
LEU 3560.0030
THR 3570.0032
PHE 3580.0033
THR 3590.0036
SER 3600.0039
ASN 3610.0038
LYS 3620.0043
GLY 3630.0050
GLY 3640.0058
ASN 3650.0055
ALA 3660.0060
PHE 3670.0052
SER 3680.0050
GLU 3690.0049
VAL 3700.0049
ASP 3710.0048
LEU 3720.0046
PRO 3730.0045
SER 3740.0044
LEU 3750.0043
GLU 3760.0040
PHE 3770.0037
LEU 3780.0037
ASP 3790.0038
LEU 3800.0039
SER 3810.0039
ARG 3820.0046
ASN 3830.0049
GLY 3840.0047
LEU 3850.0049
SER 3860.0049
PHE 3870.0055
LYS 3880.0056
GLY 3890.0056
CYS 3900.0055
CYS 3910.0056
SER 3920.0054
GLN 3930.0054
SER 3940.0054
ASP 3950.0053
PHE 3960.0053
GLY 3970.0051
THR 3980.0050
ILE 3990.0048
SER 4000.0048
LEU 4010.0048
LYS 4020.0046
TYR 4030.0045
LEU 4040.0045
ASP 4050.0045
LEU 4060.0045
SER 4070.0047
PHE 4080.0049
ASN 4090.0052
GLY 4100.0052
VAL 4110.0051
ILE 4120.0054
THR 4130.0055
MET 4140.0053
SER 4150.0058
SER 4160.0057
ASN 4170.0050
PHE 4180.0052
LEU 4190.0055
GLY 4200.0057
LEU 4210.0054
GLU 4220.0051
GLN 4230.0051
LEU 4240.0049
GLU 4250.0046
HIS 4260.0044
LEU 4270.0044
ASP 4280.0045
PHE 4290.0045
GLN 4300.0043
HIS 4310.0045
SER 4320.0048
ASN 4330.0047
LEU 4340.0046
LYS 4350.0050
GLN 4360.0051
MET 4370.0044
SER 4380.0044
GLU 4390.0053
PHE 4400.0050
SER 4410.0043
VAL 4420.0046
PHE 4430.0043
LEU 4440.0043
SER 4450.0048
LEU 4460.0044
ARG 4470.0041
ASN 4480.0044
LEU 4490.0041
ILE 4500.0037
TYR 4510.0036
LEU 4520.0033
ASP 4530.0033
ILE 4540.0032
SER 4550.0028
HIS 4560.0029
THR 4570.0037
HIS 4580.0035
THR 4590.0033
ARG 4600.0033
VAL 4610.0031
ALA 4620.0041
PHE 4630.0040
ASN 4640.0032
GLY 4650.0033
ILE 4660.0032
PHE 4670.0026
ASN 4680.0029
GLY 4690.0033
LEU 4700.0027
SER 4710.0023
SER 4720.0027
LEU 4730.0023
GLU 4740.0023
VAL 4750.0022
LEU 4760.0015
LYS 4770.0016
MET 4780.0012
ALA 4790.0009
GLY 4800.0009
ASN 4810.0014
SER 4820.0015
PHE 4830.0025
GLN 4840.0040
GLU 4850.0045
ASN 4860.0034
PHE 4870.0033
LEU 4880.0024
PRO 4890.0026
ASP 4900.0020
ILE 4910.0014
PHE 4920.0008
THR 4930.0012
GLU 4940.0009
LEU 4950.0006
ARG 4960.0008
ASN 4970.0014
LEU 4980.0012
THR 4990.0022
PHE 5000.0019
LEU 5010.0012
ASP 5020.0015
LEU 5030.0014
SER 5040.0018
GLN 5050.0015
CYS 5060.0014
GLN 5070.0021
LEU 5080.0025
GLU 5090.0037
GLN 5100.0039
LEU 5110.0034
SER 5120.0030
PRO 5130.0033
THR 5140.0027
ALA 5150.0023
PHE 5160.0022
ASN 5170.0024
SER 5180.0019
LEU 5190.0019
SER 5200.0025
SER 5210.0024
LEU 5220.0024
GLN 5230.0028
VAL 5240.0028
LEU 5250.0028
ASN 5260.0028
MET 5270.0034
SER 5280.0036
HIS 5290.0037
ASN 5300.0036
ASN 5310.0038
PHE 5320.0039
PHE 5330.0036
SER 5340.0032
LEU 5350.0030
ASP 5360.0029
THR 5370.0030
PHE 5380.0032
PRO 5390.0033
TYR 5400.0033
LYS 5410.0033
CYS 5420.0032
LEU 5430.0031
ASN 5440.0033
SER 5450.0031
LEU 5460.0031
GLN 5470.0033
VAL 5480.0034
LEU 5490.0035
ASP 5500.0037
TYR 5510.0037
SER 5520.0041
LEU 5530.0045
ASN 5540.0043
HIS 5550.0040
ILE 5560.0033
MET 5570.0026
THR 5580.0023
SER 5590.0020
LYS 5600.0031
LYS 5610.0028
GLN 5620.0020
GLU 5630.0020
LEU 5640.0011
GLN 5650.0010
HIS 5660.0022
PHE 5670.0028
PRO 5680.0027
SER 5690.0028
SER 5700.0027
LEU 5710.0028
ALA 5720.0034
PHE 5730.0037
LEU 5740.0032
ASN 5750.0037
LEU 5760.0032
THR 5770.0041
GLN 5780.0043
ASN 5790.0036
ASP 5800.0033
PHE 5810.0019
ALA 5820.0035
CYS 5830.0031
THR 5840.0058
CYS 5850.0075
GLU 5860.0076
HIS 5870.0044
GLN 5880.0048
SER 5890.0040
PHE 5900.0017
LEU 5910.0023
GLN 5920.0036
TRP 5930.0024
ILE 5940.0022
LYS 5950.0041
ASP 5960.0044
GLN 5970.0034
ARG 5980.0038
GLN 5990.0049
LEU 6000.0042
LEU 6010.0037
VAL 6020.0053
GLU 6030.0056
VAL 6040.0045
GLU 6050.0049
ARG 6060.0047
MET 6070.0031
GLU 6080.0020
CYS 6090.0011
ALA 6100.0031
THR 6110.0043
PRO 6120.0052
SER 6130.0050
ASP 6140.0043
LYS 6150.0026
GLN 6160.0021
GLY 6170.0015
MET 6180.0015
PRO 6190.0027
VAL 6200.0019
LEU 6210.0040
SER 6220.0054
LEU 6230.0046
ASN 6240.0073
ILE 6250.0078
THR 6260.0106
CYS 6270.0127
GLU 10.0084
ALA 20.0068
ALA 30.0070
ALA 40.0082
LYS 50.0073
MET 60.0060
GLN 70.0071
ARG 80.0076
LEU 90.0065
VAL 100.0066
LEU 110.0064
LEU 120.0059
LEU 130.0060
ALA 140.0065
ILE 150.0064
SER 160.0051
LEU 170.0053
LEU 180.0047
LEU 190.0045
TYR 200.0050
GLN 210.0036
ASP 220.0029
LEU 230.0029
PRO 240.0041
VAL 250.0046
ARG 260.0029
SER 270.0025
GLU 280.0045
PHE 290.0061
GLU 300.0039
LEU 310.0022
ASP 320.0030
ARG 330.0032
ILE 340.0017
CYS 350.0025
GLY 360.0024
TYR 370.0019
GLY 380.0019
THR 390.0019
ALA 400.0027
ARG 410.0034
CYS 420.0078
ARG 430.0112
LYS 440.0161
LYS 450.0155
CYS 460.0091
ARG 470.0079
SER 480.0066
GLN 490.0040
GLU 500.0048
TYR 510.0069
ARG 520.0105
ILE 530.0110
GLY 540.0145
ARG 550.0163
CYS 560.0128
PRO 570.0147
ASN 580.0164
THR 590.0198
TYR 600.0168
ALA 610.0121
CYS 620.0091
CYS 630.0074
LEU 640.0048
ARG 650.0030
LYS 660.0034
TRP 670.0031
ASP 680.0029
GLU 690.0024
SER 700.0026
LEU 710.0034
LEU 720.0040
ASN 730.0039
ARG 740.0038
THR 750.0043
LYS 760.0064
PRO 770.0066
GLU 780.0060
ALA 790.0066
ALA 800.0074
ALA 810.0208
LYS 820.0214
LYS 830.0177
GLU 840.0189
MET 850.0158
ASN 860.0136
LEU 870.0068
SER 880.0079
VAL 890.0070
GLY 900.0138
LEU 910.0179
GLY 920.0286
GLY 930.0341
GLY 940.0313
SER 950.0214
ASN 960.0155
LEU 970.0088
SER 980.0110
VAL 990.0102
GLY 1000.0171
LEU 1010.0141
GLY 1020.0164
GLU 1030.0201
ILE 1040.0203
GLY 1050.0244
GLY 1060.0235
GLY 1070.0199
SER 1080.0185
LYS 1090.0136
LEU 1100.0126
LEU 1110.0132
ASP 1120.0159
ILE 1130.0133
ASN 1140.0187
LEU 1150.0185
GLY 1160.0248
ARG 1170.0333
GLY 1180.0209
GLY 1190.0346
GLY 1200.0439
SER 1210.0229
MET 1220.0177
VAL 1230.0147
ASP 1240.0099
LEU 1250.0062
THR 1260.0044
PHE 1270.0053
GLY 1280.0061
GLY 1290.0080
VAL 1300.0105
GLY 1310.0176
GLY 1320.0144
GLY 1330.0124
SER 1340.0103
THR 1350.0087
PHE 1360.0078
THR 1370.0055
PHE 1380.0040
PHE 1390.0018
PRO 1400.0026
LEU 1410.0082
VAL 1420.0157
ILE 1430.0134
GLY 1440.0193
GLY 1450.0212
GLY 1460.0110
SER 1470.0112
ASP 1480.0153
ALA 1490.0097
MET 1500.0071
TYR 1510.0019
LEU 1520.0034
GLY 1530.0037
PHE 1540.0057
ALA 1550.0057
ALA 1560.0061
GLY 1570.0036
GLY 1580.0041
GLY 1590.0072
SER 1600.0109
ALA 1610.0169
GLY 1620.0146
GLY 1630.0107
GLU 1640.0074
ASN 1650.0067
HIS 1660.0043
VAL 1670.0063
ALA 1680.0077
PHE 1690.0108
GLY 1700.0121
PRO 1710.0170
GLY 1720.0246
PRO 1730.0310
GLY 1740.0228
VAL 1750.0129
ASP 1760.0137
LEU 1770.0108
THR 1780.0127
PHE 1790.0144
GLY 1800.0177
GLY 1810.0233
VAL 1820.0255
GLN 1830.0230
PHE 1840.0210
ALA 1850.0227
MET 1860.0187
VAL 1870.0181
ASN 1880.0280
ASN 1890.0335
GLY 1900.0502
PRO 1910.0480
GLY 1920.0398
PRO 1930.0402
GLY 1940.0302
GLU 1950.0145
SER 1960.0212
PHE 1970.0121
THR 1980.0311
ALA 1990.0326
GLN 2000.0216
PRO 2010.0135
ALA 2020.0149
ASP 2030.0188
MET 2040.0364
GLN 2050.0540
ALA 2060.0245
GLY 2070.0273
ILE 2080.0416
LYS 2090.0361
GLY 2100.0600
PRO 2110.0877
GLY 2120.0312
PRO 2130.0714
GLY 2140.0863
GLY 2150.0291
SER 2160.0455
ILE 2170.0248
GLN 2180.0186
VAL 2190.0225
ILE 2200.0450
ASN 2210.0332
GLY 2220.0249
SER 2230.0222
THR 2240.0256
ILE 2250.0245
GLY 2260.0173
THR 2270.0194
GLY 2280.0225
SER 2290.0373
LYS 2300.0285
LYS 2310.0236
THR 2320.0203
ILE 2330.0212
LEU 2340.0231
ILE 2350.0226
TYR 2360.0246
SER 2370.0242
ILE 2380.0227
ILE 2390.0215
GLY 2400.0205
VAL 2410.0113
LYS 2420.0091
LYS 2430.0080
GLY 2440.0073
THR 2450.0083
LEU 2460.0165
ALA 2470.0194
TRP 2480.0215
ALA 2490.0248
ARG 2500.0273
THR 2510.0288
GLY 2520.0221
PHE 2530.0141
SER 2540.0085
PRO 2550.0092
ALA 2560.0153
LYS 2570.0219
LYS 2580.0055
LEU 2590.0194
ASN 2600.0311
ALA 2610.0305
GLY 2620.0256
VAL 2630.0188
VAL 2640.0165
ARG 2650.0107
VAL 2660.0144
PHE 2670.0141
PHE 2680.0101
LEU 2690.0118
ASN 2700.0105
GLN 2710.0096
LYS 2720.0089
LYS 2730.0096
ALA 2740.0102
LYS 2750.0096
ASP 2760.0099
VAL 2770.0100
LEU 2780.0078
ARG 2790.0066
LYS 2800.0087
THR 2810.0085
SER 2820.0064
ARG 2830.0023
PRO 2840.0109
MET 2850.0166
VAL 2860.0103
ASP 2870.0101
LEU 2880.0102
THR 2890.0114
PHE 2900.0120
GLY 2910.0063
GLY 2920.0183

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.