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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0797
GLU 270.0058
PRO 280.0060
CYS 290.0048
VAL 300.0039
GLU 310.0029
VAL 320.0020
VAL 330.0011
PRO 340.0023
ASN 350.0026
ILE 360.0013
THR 370.0013
TYR 380.0025
GLN 390.0034
CYS 400.0044
MET 410.0051
GLU 420.0062
LEU 430.0064
ASN 440.0069
PHE 450.0061
TYR 460.0064
LYS 470.0062
ILE 480.0050
PRO 490.0049
ASP 500.0050
ASN 510.0052
LEU 520.0041
PRO 530.0037
PHE 540.0034
SER 550.0025
THR 560.0017
LYS 570.0007
ASN 580.0012
LEU 590.0020
ASP 600.0030
LEU 610.0039
SER 620.0045
PHE 630.0056
ASN 640.0056
PRO 650.0062
LEU 660.0053
ARG 670.0055
HIS 680.0053
LEU 690.0045
GLY 700.0046
SER 710.0040
TYR 720.0035
SER 730.0041
PHE 740.0030
PHE 750.0030
SER 760.0033
PHE 770.0022
PRO 780.0017
GLU 790.0012
LEU 800.0008
GLN 810.0014
VAL 820.0019
LEU 830.0022
ASP 840.0029
LEU 850.0035
SER 860.0041
ARG 870.0045
CYS 880.0044
GLU 890.0051
ILE 900.0048
GLN 910.0053
THR 920.0053
ILE 930.0046
GLU 940.0046
ASP 950.0042
GLY 960.0035
ALA 970.0037
TYR 980.0028
GLN 990.0024
SER 1000.0018
LEU 1010.0014
SER 1020.0013
HIS 1030.0013
LEU 1040.0018
SER 1050.0025
THR 1060.0029
LEU 1070.0029
ILE 1080.0031
LEU 1090.0035
THR 1100.0037
GLY 1110.0040
ASN 1120.0040
PRO 1130.0046
ILE 1140.0046
GLN 1150.0052
SER 1160.0051
LEU 1170.0046
ALA 1180.0048
LEU 1190.0046
GLY 1200.0041
ALA 1210.0039
PHE 1220.0034
SER 1230.0032
GLY 1240.0026
LEU 1250.0026
SER 1260.0024
SER 1270.0027
LEU 1280.0030
GLN 1290.0033
LYS 1300.0034
LEU 1310.0036
VAL 1320.0034
ALA 1330.0036
VAL 1340.0037
GLU 1350.0038
THR 1360.0037
ASN 1370.0033
LEU 1380.0033
ALA 1390.0036
SER 1400.0035
LEU 1410.0033
GLU 1420.0037
ASN 1430.0037
PHE 1440.0037
PRO 1450.0039
ILE 1460.0039
GLY 1470.0041
HIS 1480.0040
LEU 1490.0036
LYS 1500.0037
THR 1510.0034
LEU 1520.0036
LYS 1530.0036
GLU 1540.0037
LEU 1550.0038
ASN 1560.0038
VAL 1570.0032
ALA 1580.0035
HIS 1590.0039
ASN 1600.0036
LEU 1610.0037
ILE 1620.0034
GLN 1630.0036
SER 1640.0034
PHE 1650.0031
LYS 1660.0031
LEU 1670.0032
PRO 1680.0033
GLU 1690.0038
TYR 1700.0039
PHE 1710.0038
SER 1720.0041
ASN 1730.0040
LEU 1740.0036
THR 1750.0037
ASN 1760.0035
LEU 1770.0033
GLU 1780.0032
HIS 1790.0033
LEU 1800.0034
ASP 1810.0036
LEU 1820.0031
SER 1830.0037
SER 1840.0044
ASN 1850.0041
LYS 1860.0045
ILE 1870.0044
GLN 1880.0051
SER 1890.0048
ILE 1900.0041
TYR 1910.0047
CYS 1920.0047
THR 1930.0042
ASP 1940.0033
LEU 1950.0035
ARG 1960.0040
VAL 1970.0033
LEU 1980.0035
HIS 1990.0043
GLN 2000.0046
MET 2010.0046
PRO 2020.0039
LEU 2030.0037
LEU 2040.0027
ASN 2050.0023
LEU 2060.0018
SER 2070.0016
LEU 2080.0020
ASP 2090.0027
LEU 2100.0032
SER 2110.0038
LEU 2120.0046
ASN 2130.0046
PRO 2140.0056
MET 2150.0052
ASN 2160.0062
PHE 2170.0058
ILE 2180.0051
GLN 2190.0057
PRO 2200.0062
GLY 2210.0060
ALA 2220.0047
PHE 2230.0041
LYS 2240.0052
GLU 2250.0050
ILE 2260.0037
ARG 2270.0021
LEU 2280.0010
HIS 2290.0005
LYS 2300.0008
LEU 2310.0016
THR 2320.0023
LEU 2330.0031
ARG 2340.0038
ASN 2350.0048
ASN 2360.0047
PHE 2370.0058
ASP 2380.0069
SER 2390.0068
LEU 2400.0062
ASN 2410.0070
VAL 2420.0066
MET 2430.0055
LYS 2440.0058
THR 2450.0063
CYS 2460.0053
ILE 2470.0048
GLN 2480.0056
GLY 2490.0051
LEU 2500.0042
ALA 2510.0050
GLY 2520.0044
LEU 2530.0031
GLU 2540.0023
VAL 2550.0011
HIS 2560.0009
ARG 2570.0011
LEU 2580.0014
VAL 2590.0020
LEU 2600.0026
GLY 2610.0034
GLU 2620.0043
PHE 2630.0050
ARG 2640.0055
ASN 2650.0065
GLU 2660.0064
GLY 2670.0068
ASN 2680.0059
LEU 2690.0058
GLU 2700.0066
LYS 2710.0059
PHE 2720.0042
ASP 2730.0042
LYS 2740.0037
SER 2750.0043
ALA 2760.0039
LEU 2770.0034
GLU 2780.0040
GLY 2790.0040
LEU 2800.0031
CYS 2810.0036
ASN 2820.0037
LEU 2830.0028
THR 2840.0024
ILE 2850.0016
GLU 2860.0021
GLU 2870.0021
PHE 2880.0019
ARG 2890.0018
LEU 2900.0019
ALA 2910.0021
TYR 2920.0031
LEU 2930.0031
ASP 2940.0036
TYR 2950.0032
TYR 2960.0024
LEU 2970.0017
ASP 2980.0016
GLY 2990.0016
ILE 3000.0017
ILE 3010.0020
ASP 3020.0023
LEU 3030.0021
PHE 3040.0019
ASN 3050.0024
CYS 3060.0027
LEU 3070.0027
THR 3080.0033
ASN 3090.0040
VAL 3100.0033
SER 3110.0038
SER 3120.0029
PHE 3130.0025
SER 3140.0022
LEU 3150.0020
VAL 3160.0020
SER 3170.0021
VAL 3180.0019
THR 3190.0020
ILE 3200.0019
GLU 3210.0022
ARG 3220.0027
VAL 3230.0030
LYS 3240.0034
ASP 3250.0030
PHE 3260.0035
SER 3270.0042
TYR 3280.0040
ASN 3290.0046
PHE 3300.0043
GLY 3310.0048
TRP 3320.0045
GLN 3330.0049
HIS 3340.0041
LEU 3350.0035
GLU 3360.0028
LEU 3370.0026
VAL 3380.0026
ASN 3390.0026
CYS 3400.0026
LYS 3410.0026
PHE 3420.0032
GLY 3430.0032
GLN 3440.0033
PHE 3450.0036
PRO 3460.0034
THR 3470.0048
LEU 3480.0050
LYS 3490.0055
LEU 3500.0056
LYS 3510.0063
SER 3520.0063
LEU 3530.0056
LYS 3540.0054
ARG 3550.0046
LEU 3560.0042
THR 3570.0032
PHE 3580.0032
THR 3590.0030
SER 3600.0028
ASN 3610.0028
LYS 3620.0038
GLY 3630.0042
GLY 3640.0041
ASN 3650.0032
ALA 3660.0028
PHE 3670.0052
SER 3680.0058
GLU 3690.0064
VAL 3700.0062
ASP 3710.0068
LEU 3720.0069
PRO 3730.0073
SER 3740.0072
LEU 3750.0068
GLU 3760.0067
PHE 3770.0053
LEU 3780.0048
ASP 3790.0039
LEU 3800.0039
SER 3810.0031
ARG 3820.0023
ASN 3830.0028
GLY 3840.0029
LEU 3850.0033
SER 3860.0037
PHE 3870.0064
LYS 3880.0079
GLY 3890.0089
CYS 3900.0081
CYS 3910.0085
SER 3920.0095
GLN 3930.0098
SER 3940.0097
ASP 3950.0083
PHE 3960.0080
GLY 3970.0086
THR 3980.0087
ILE 3990.0091
SER 4000.0088
LEU 4010.0082
LYS 4020.0079
TYR 4030.0065
LEU 4040.0059
ASP 4050.0046
LEU 4060.0046
SER 4070.0030
PHE 4080.0026
ASN 4090.0037
GLY 4100.0047
VAL 4110.0058
ILE 4120.0070
THR 4130.0086
MET 4140.0090
SER 4150.0107
SER 4160.0110
ASN 4170.0101
PHE 4180.0100
LEU 4190.0116
GLY 4200.0119
LEU 4210.0104
GLU 4220.0109
GLN 4230.0106
LEU 4240.0089
GLU 4250.0083
HIS 4260.0067
LEU 4270.0059
ASP 4280.0043
PHE 4290.0042
GLN 4300.0026
HIS 4310.0031
SER 4320.0043
ASN 4330.0059
LEU 4340.0066
LYS 4350.0084
GLN 4360.0095
MET 4370.0082
SER 4380.0089
GLU 4390.0109
PHE 4400.0107
SER 4410.0095
VAL 4420.0092
PHE 4430.0087
LEU 4440.0101
SER 4450.0111
LEU 4460.0097
ARG 4470.0105
ASN 4480.0103
LEU 4490.0084
ILE 4500.0075
TYR 4510.0058
LEU 4520.0046
ASP 4530.0031
ILE 4540.0033
SER 4550.0020
HIS 4560.0031
THR 4570.0046
HIS 4580.0060
THR 4590.0058
ARG 4600.0067
VAL 4610.0058
ALA 4620.0080
PHE 4630.0079
ASN 4640.0065
GLY 4650.0074
ILE 4660.0068
PHE 4670.0061
ASN 4680.0076
GLY 4690.0086
LEU 4700.0072
SER 4710.0077
SER 4720.0079
LEU 4730.0061
GLU 4740.0056
VAL 4750.0043
LEU 4760.0027
LYS 4770.0015
MET 4780.0015
ALA 4790.0019
GLY 4800.0032
ASN 4810.0038
SER 4820.0051
PHE 4830.0051
GLN 4840.0068
GLU 4850.0075
ASN 4860.0064
PHE 4870.0055
LEU 4880.0037
PRO 4890.0037
ASP 4900.0025
ILE 4910.0028
PHE 4920.0025
THR 4930.0027
GLU 4940.0044
LEU 4950.0039
ARG 4960.0042
ASN 4970.0050
LEU 4980.0035
THR 4990.0046
PHE 5000.0036
LEU 5010.0020
ASP 5020.0022
LEU 5030.0025
SER 5040.0033
GLN 5050.0037
CYS 5060.0036
GLN 5070.0048
LEU 5080.0047
GLU 5090.0060
GLN 5100.0057
LEU 5110.0047
SER 5120.0048
PRO 5130.0051
THR 5140.0037
ALA 5150.0030
PHE 5160.0028
ASN 5170.0029
SER 5180.0019
LEU 5190.0025
SER 5200.0038
SER 5210.0043
LEU 5220.0038
GLN 5230.0048
VAL 5240.0044
LEU 5250.0041
ASN 5260.0041
MET 5270.0047
SER 5280.0049
HIS 5290.0049
ASN 5300.0049
ASN 5310.0052
PHE 5320.0057
PHE 5330.0056
SER 5340.0057
LEU 5350.0057
ASP 5360.0062
THR 5370.0065
PHE 5380.0069
PRO 5390.0063
TYR 5400.0060
LYS 5410.0067
CYS 5420.0054
LEU 5430.0051
ASN 5440.0058
SER 5450.0053
LEU 5460.0052
GLN 5470.0055
VAL 5480.0052
LEU 5490.0053
ASP 5500.0051
TYR 5510.0053
SER 5520.0051
LEU 5530.0051
ASN 5540.0054
HIS 5550.0052
ILE 5560.0051
MET 5570.0050
THR 5580.0048
SER 5590.0051
LYS 5600.0063
LYS 5610.0069
GLN 5620.0064
GLU 5630.0068
LEU 5640.0055
GLN 5650.0062
HIS 5660.0070
PHE 5670.0065
PRO 5680.0061
SER 5690.0067
SER 5700.0059
LEU 5710.0057
ALA 5720.0051
PHE 5730.0050
LEU 5740.0047
ASN 5750.0047
LEU 5760.0043
THR 5770.0038
GLN 5780.0042
ASN 5790.0047
ASP 5800.0052
PHE 5810.0040
ALA 5820.0074
CYS 5830.0076
THR 5840.0102
CYS 5850.0104
GLU 5860.0094
HIS 5870.0052
GLN 5880.0048
SER 5890.0021
PHE 5900.0007
LEU 5910.0024
GLN 5920.0032
TRP 5930.0022
ILE 5940.0017
LYS 5950.0044
ASP 5960.0055
GLN 5970.0039
ARG 5980.0030
GLN 5990.0050
LEU 6000.0051
LEU 6010.0032
VAL 6020.0047
GLU 6030.0035
VAL 6040.0021
GLU 6050.0015
ARG 6060.0015
MET 6070.0011
GLU 6080.0039
CYS 6090.0064
ALA 6100.0090
THR 6110.0112
PRO 6120.0146
SER 6130.0171
ASP 6140.0176
LYS 6150.0131
GLN 6160.0120
GLY 6170.0085
MET 6180.0078
PRO 6190.0049
VAL 6200.0039
LEU 6210.0052
SER 6220.0084
LEU 6230.0094
ASN 6240.0136
ILE 6250.0121
THR 6260.0165
CYS 6270.0217
GLU 10.0138
ALA 20.0086
ALA 30.0085
ALA 40.0104
LYS 50.0083
MET 60.0047
GLN 70.0067
ARG 80.0101
LEU 90.0093
VAL 100.0087
LEU 110.0089
LEU 120.0093
LEU 130.0093
ALA 140.0087
ILE 150.0089
SER 160.0066
LEU 170.0077
LEU 180.0061
LEU 190.0043
TYR 200.0058
GLN 210.0051
ASP 220.0033
LEU 230.0050
PRO 240.0077
VAL 250.0089
ARG 260.0028
SER 270.0040
GLU 280.0035
PHE 290.0066
GLU 300.0055
LEU 310.0034
ASP 320.0029
ARG 330.0040
ILE 340.0023
CYS 350.0012
GLY 360.0019
TYR 370.0019
GLY 380.0021
THR 390.0018
ALA 400.0020
ARG 410.0034
CYS 420.0076
ARG 430.0116
LYS 440.0167
LYS 450.0162
CYS 460.0093
ARG 470.0084
SER 480.0072
GLN 490.0046
GLU 500.0049
TYR 510.0068
ARG 520.0102
ILE 530.0102
GLY 540.0139
ARG 550.0159
CYS 560.0122
PRO 570.0140
ASN 580.0160
THR 590.0197
TYR 600.0169
ALA 610.0119
CYS 620.0088
CYS 630.0073
LEU 640.0043
ARG 650.0031
LYS 660.0042
TRP 670.0042
ASP 680.0040
GLU 690.0036
SER 700.0037
LEU 710.0046
LEU 720.0052
ASN 730.0049
ARG 740.0049
THR 750.0057
LYS 760.0068
PRO 770.0074
GLU 780.0069
ALA 790.0080
ALA 800.0088
ALA 810.0067
LYS 820.0058
LYS 830.0048
GLU 840.0044
MET 850.0031
ASN 860.0023
LEU 870.0014
SER 880.0019
VAL 890.0035
GLY 900.0055
LEU 910.0089
GLY 920.0141
GLY 930.0197
GLY 940.0173
SER 950.0132
ASN 960.0071
LEU 970.0058
SER 980.0029
VAL 990.0034
GLY 1000.0035
LEU 1010.0046
GLY 1020.0054
GLU 1030.0078
ILE 1040.0124
GLY 1050.0173
GLY 1060.0251
GLY 1070.0154
SER 1080.0104
LYS 1090.0051
LEU 1100.0109
LEU 1110.0103
ASP 1120.0115
ILE 1130.0080
ASN 1140.0119
LEU 1150.0096
GLY 1160.0188
ARG 1170.0260
GLY 1180.0219
GLY 1190.0200
GLY 1200.0170
SER 1210.0087
MET 1220.0067
VAL 1230.0043
ASP 1240.0032
LEU 1250.0020
THR 1260.0027
PHE 1270.0027
GLY 1280.0038
GLY 1290.0039
VAL 1300.0041
GLY 1310.0034
GLY 1320.0020
GLY 1330.0034
SER 1340.0055
THR 1350.0078
PHE 1360.0082
THR 1370.0103
PHE 1380.0057
PHE 1390.0076
PRO 1400.0033
LEU 1410.0080
VAL 1420.0166
ILE 1430.0298
GLY 1440.0431
GLY 1450.0572
GLY 1460.0475
SER 1470.0355
ASP 1480.0209
ALA 1490.0201
MET 1500.0123
TYR 1510.0138
LEU 1520.0077
GLY 1530.0072
PHE 1540.0087
ALA 1550.0116
ALA 1560.0112
GLY 1570.0112
GLY 1580.0091
GLY 1590.0084
SER 1600.0071
ALA 1610.0070
GLY 1620.0053
GLY 1630.0052
GLU 1640.0039
ASN 1650.0033
HIS 1660.0027
VAL 1670.0022
ALA 1680.0026
PHE 1690.0023
GLY 1700.0029
PRO 1710.0123
GLY 1720.0110
PRO 1730.0090
GLY 1740.0053
VAL 1750.0031
ASP 1760.0049
LEU 1770.0051
THR 1780.0067
PHE 1790.0076
GLY 1800.0095
GLY 1810.0132
VAL 1820.0135
GLN 1830.0112
PHE 1840.0100
ALA 1850.0089
MET 1860.0046
VAL 1870.0053
ASN 1880.0046
ASN 1890.0060
GLY 1900.0055
PRO 1910.0059
GLY 1920.0082
PRO 1930.0071
GLY 1940.0085
GLU 1950.0108
SER 1960.0229
PHE 1970.0167
THR 1980.0280
ALA 1990.0340
GLN 2000.0154
PRO 2010.0098
ALA 2020.0146
ASP 2030.0265
MET 2040.0391
GLN 2050.0522
ALA 2060.0284
GLY 2070.0130
ILE 2080.0341
LYS 2090.0424
GLY 2100.0570
PRO 2110.0698
GLY 2120.0329
PRO 2130.0595
GLY 2140.0607
GLY 2150.0235
SER 2160.0499
ILE 2170.0294
GLN 2180.0267
VAL 2190.0272
ILE 2200.0220
ASN 2210.0263
GLY 2220.0196
SER 2230.0087
THR 2240.0241
ILE 2250.0249
GLY 2260.0409
THR 2270.0395
GLY 2280.0276
SER 2290.0191
LYS 2300.0119
LYS 2310.0163
THR 2320.0079
ILE 2330.0138
LEU 2340.0170
ILE 2350.0280
TYR 2360.0294
SER 2370.0248
ILE 2380.0250
ILE 2390.0211
GLY 2400.0209
VAL 2410.0166
LYS 2420.0124
LYS 2430.0121
GLY 2440.0165
THR 2450.0181
LEU 2460.0318
ALA 2470.0276
TRP 2480.0284
ALA 2490.0234
ARG 2500.0244
THR 2510.0161
GLY 2520.0130
PHE 2530.0089
SER 2540.0067
PRO 2550.0068
ALA 2560.0222
LYS 2570.0287
LYS 2580.0162
LEU 2590.0353
ASN 2600.0575
ALA 2610.0797
GLY 2620.0588
VAL 2630.0475
VAL 2640.0359
ARG 2650.0186
VAL 2660.0187
PHE 2670.0140
PHE 2680.0122
LEU 2690.0076
ASN 2700.0055
GLN 2710.0013
LYS 2720.0011
LYS 2730.0020
ALA 2740.0019
LYS 2750.0024
ASP 2760.0044
VAL 2770.0048
LEU 2780.0032
ARG 2790.0042
LYS 2800.0062
THR 2810.0047
SER 2820.0149
ARG 2830.0138
PRO 2840.0235
MET 2850.0341
VAL 2860.0100
ASP 2870.0211
LEU 2880.0240
THR 2890.0409
PHE 2900.0379
GLY 2910.0276
GLY 2920.0619

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.