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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 65  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1270
GLU 270.0071
PRO 280.0077
CYS 290.0066
VAL 300.0081
GLU 310.0077
VAL 320.0085
VAL 330.0072
PRO 340.0063
ASN 350.0038
ILE 360.0037
THR 370.0049
TYR 380.0047
GLN 390.0057
CYS 400.0044
MET 410.0054
GLU 420.0057
LEU 430.0051
ASN 440.0041
PHE 450.0027
TYR 460.0014
LYS 470.0008
ILE 480.0008
PRO 490.0023
ASP 500.0032
ASN 510.0046
LEU 520.0035
PRO 530.0029
PHE 540.0024
SER 550.0011
THR 560.0015
LYS 570.0029
ASN 580.0037
LEU 590.0030
ASP 600.0039
LEU 610.0030
SER 620.0042
PHE 630.0046
ASN 640.0034
PRO 650.0029
LEU 660.0022
ARG 670.0032
HIS 680.0030
LEU 690.0029
GLY 700.0028
SER 710.0030
TYR 720.0030
SER 730.0021
PHE 740.0021
PHE 750.0027
SER 760.0023
PHE 770.0022
PRO 780.0035
GLU 790.0032
LEU 800.0031
GLN 810.0043
VAL 820.0041
LEU 830.0037
ASP 840.0039
LEU 850.0036
SER 860.0042
ARG 870.0037
CYS 880.0035
GLU 890.0038
ILE 900.0036
GLN 910.0040
THR 920.0037
ILE 930.0035
GLU 940.0034
ASP 950.0035
GLY 960.0035
ALA 970.0033
TYR 980.0036
GLN 990.0040
SER 1000.0038
LEU 1010.0039
SER 1020.0046
HIS 1030.0047
LEU 1040.0044
SER 1050.0047
THR 1060.0044
LEU 1070.0039
ILE 1080.0037
LEU 1090.0034
THR 1100.0033
GLY 1110.0031
ASN 1120.0034
PRO 1130.0037
ILE 1140.0036
GLN 1150.0039
SER 1160.0038
LEU 1170.0036
ALA 1180.0036
LEU 1190.0035
GLY 1200.0036
ALA 1210.0036
PHE 1220.0038
SER 1230.0039
GLY 1240.0041
LEU 1250.0042
SER 1260.0045
SER 1270.0043
LEU 1280.0039
GLN 1290.0041
LYS 1300.0039
LEU 1310.0033
VAL 1320.0027
ALA 1330.0021
VAL 1340.0024
GLU 1350.0021
THR 1360.0017
ASN 1370.0013
LEU 1380.0016
ALA 1390.0020
SER 1400.0022
LEU 1410.0023
GLU 1420.0019
ASN 1430.0016
PHE 1440.0020
PRO 1450.0021
ILE 1460.0025
GLY 1470.0022
HIS 1480.0026
LEU 1490.0029
LYS 1500.0025
THR 1510.0030
LEU 1520.0024
LYS 1530.0030
GLU 1540.0030
LEU 1550.0025
ASN 1560.0028
VAL 1570.0023
ALA 1580.0028
HIS 1590.0031
ASN 1600.0028
LEU 1610.0028
ILE 1620.0033
GLN 1630.0035
SER 1640.0035
PHE 1650.0036
LYS 1660.0034
LEU 1670.0028
PRO 1680.0023
GLU 1690.0022
TYR 1700.0020
PHE 1710.0023
SER 1720.0020
ASN 1730.0019
LEU 1740.0021
THR 1750.0021
ASN 1760.0025
LEU 1770.0020
GLU 1780.0027
HIS 1790.0029
LEU 1800.0026
ASP 1810.0029
LEU 1820.0034
SER 1830.0036
SER 1840.0038
ASN 1850.0038
LYS 1860.0039
ILE 1870.0044
GLN 1880.0042
SER 1890.0040
ILE 1900.0038
TYR 1910.0038
CYS 1920.0037
THR 1930.0034
ASP 1940.0035
LEU 1950.0034
ARG 1960.0032
VAL 1970.0031
LEU 1980.0033
HIS 1990.0036
GLN 2000.0035
MET 2010.0034
PRO 2020.0039
LEU 2030.0038
LEU 2040.0034
ASN 2050.0035
LEU 2060.0033
SER 2070.0037
LEU 2080.0037
ASP 2090.0038
LEU 2100.0039
SER 2110.0040
LEU 2120.0042
ASN 2130.0043
PRO 2140.0043
MET 2150.0040
ASN 2160.0039
PHE 2170.0038
ILE 2180.0037
GLN 2190.0037
PRO 2200.0035
GLY 2210.0035
ALA 2220.0036
PHE 2230.0037
LYS 2240.0038
GLU 2250.0039
ILE 2260.0038
ARG 2270.0040
LEU 2280.0040
HIS 2290.0041
LYS 2300.0039
LEU 2310.0038
THR 2320.0043
LEU 2330.0039
ARG 2340.0038
ASN 2350.0037
ASN 2360.0038
PHE 2370.0034
ASP 2380.0031
SER 2390.0021
LEU 2400.0015
ASN 2410.0019
VAL 2420.0027
MET 2430.0025
LYS 2440.0020
THR 2450.0029
CYS 2460.0034
ILE 2470.0029
GLN 2480.0029
GLY 2490.0034
LEU 2500.0034
ALA 2510.0032
GLY 2520.0035
LEU 2530.0035
GLU 2540.0039
VAL 2550.0039
HIS 2560.0042
ARG 2570.0039
LEU 2580.0034
VAL 2590.0035
LEU 2600.0031
GLY 2610.0033
GLU 2620.0043
PHE 2630.0047
ARG 2640.0046
ASN 2650.0045
GLU 2660.0039
GLY 2670.0046
ASN 2680.0040
LEU 2690.0027
GLU 2700.0023
LYS 2710.0021
PHE 2720.0030
ASP 2730.0029
LYS 2740.0025
SER 2750.0016
ALA 2760.0010
LEU 2770.0008
GLU 2780.0008
GLY 2790.0016
LEU 2800.0017
CYS 2810.0017
ASN 2820.0025
LEU 2830.0028
THR 2840.0032
ILE 2850.0032
GLU 2860.0035
GLU 2870.0033
PHE 2880.0027
ARG 2890.0033
LEU 2900.0034
ALA 2910.0047
TYR 2920.0064
LEU 2930.0058
ASP 2940.0070
TYR 2950.0061
TYR 2960.0071
LEU 2970.0075
ASP 2980.0084
GLY 2990.0069
ILE 3000.0050
ILE 3010.0054
ASP 3020.0036
LEU 3030.0028
PHE 3040.0016
ASN 3050.0019
CYS 3060.0014
LEU 3070.0008
THR 3080.0012
ASN 3090.0021
VAL 3100.0022
SER 3110.0029
SER 3120.0031
PHE 3130.0024
SER 3140.0036
LEU 3150.0042
VAL 3160.0057
SER 3170.0080
VAL 3180.0072
THR 3190.0082
ILE 3200.0077
GLU 3210.0092
ARG 3220.0084
VAL 3230.0065
LYS 3240.0065
ASP 3250.0055
PHE 3260.0036
SER 3270.0039
TYR 3280.0037
ASN 3290.0031
PHE 3300.0019
GLY 3310.0025
TRP 3320.0020
GLN 3330.0029
HIS 3340.0030
LEU 3350.0026
GLU 3360.0033
LEU 3370.0044
VAL 3380.0067
ASN 3390.0085
CYS 3400.0076
LYS 3410.0087
PHE 3420.0081
GLY 3430.0094
GLN 3440.0076
PHE 3450.0054
PRO 3460.0041
THR 3470.0035
LEU 3480.0021
LYS 3490.0018
LEU 3500.0014
LYS 3510.0028
SER 3520.0027
LEU 3530.0028
LYS 3540.0038
ARG 3550.0040
LEU 3560.0037
THR 3570.0051
PHE 3580.0045
THR 3590.0067
SER 3600.0084
ASN 3610.0074
LYS 3620.0096
GLY 3630.0093
GLY 3640.0082
ASN 3650.0064
ALA 3660.0052
PHE 3670.0032
SER 3680.0020
GLU 3690.0010
VAL 3700.0012
ASP 3710.0013
LEU 3720.0025
PRO 3730.0033
SER 3740.0036
LEU 3750.0040
GLU 3760.0053
PHE 3770.0063
LEU 3780.0057
ASP 3790.0062
LEU 3800.0057
SER 3810.0068
ARG 3820.0077
ASN 3830.0066
GLY 3840.0069
LEU 3850.0051
SER 3860.0043
PHE 3870.0045
LYS 3880.0034
GLY 3890.0039
CYS 3900.0052
CYS 3910.0057
SER 3920.0050
GLN 3930.0048
SER 3940.0036
ASP 3950.0035
PHE 3960.0038
GLY 3970.0031
THR 3980.0044
ILE 3990.0058
SER 4000.0063
LEU 4010.0064
LYS 4020.0082
TYR 4030.0081
LEU 4040.0074
ASP 4050.0075
LEU 4060.0068
SER 4070.0074
PHE 4080.0074
ASN 4090.0066
GLY 4100.0062
VAL 4110.0059
ILE 4120.0061
THR 4130.0056
MET 4140.0060
SER 4150.0056
SER 4160.0062
ASN 4170.0069
PHE 4180.0070
LEU 4190.0068
GLY 4200.0070
LEU 4210.0074
GLU 4220.0085
GLN 4230.0091
LEU 4240.0088
GLU 4250.0096
HIS 4260.0093
LEU 4270.0085
ASP 4280.0084
PHE 4290.0077
GLN 4300.0080
HIS 4310.0076
SER 4320.0075
ASN 4330.0067
LEU 4340.0066
LYS 4350.0060
GLN 4360.0057
MET 4370.0057
SER 4380.0051
GLU 4390.0052
PHE 4400.0058
SER 4410.0063
VAL 4420.0068
PHE 4430.0075
LEU 4440.0076
SER 4450.0083
LEU 4460.0086
ARG 4470.0092
ASN 4480.0099
LEU 4490.0093
ILE 4500.0096
TYR 4510.0091
LEU 4520.0082
ASP 4530.0079
ILE 4540.0070
SER 4550.0069
HIS 4560.0066
THR 4570.0062
HIS 4580.0053
THR 4590.0046
ARG 4600.0034
VAL 4610.0033
ALA 4620.0022
PHE 4630.0034
ASN 4640.0034
GLY 4650.0050
ILE 4660.0051
PHE 4670.0057
ASN 4680.0064
GLY 4690.0078
LEU 4700.0075
SER 4710.0078
SER 4720.0086
LEU 4730.0076
GLU 4740.0074
VAL 4750.0072
LEU 4760.0061
LYS 4770.0061
MET 4780.0051
ALA 4790.0052
GLY 4800.0055
ASN 4810.0041
SER 4820.0038
PHE 4830.0018
GLN 4840.0018
GLU 4850.0044
ASN 4860.0047
PHE 4870.0045
LEU 4880.0030
PRO 4890.0029
ASP 4900.0032
ILE 4910.0027
PHE 4920.0026
THR 4930.0041
GLU 4940.0056
LEU 4950.0047
ARG 4960.0048
ASN 4970.0053
LEU 4980.0039
THR 4990.0039
PHE 5000.0041
LEU 5010.0030
ASP 5020.0030
LEU 5030.0025
SER 5040.0043
GLN 5050.0053
CYS 5060.0039
GLN 5070.0068
LEU 5080.0061
GLU 5090.0074
GLN 5100.0069
LEU 5110.0058
SER 5120.0053
PRO 5130.0061
THR 5140.0049
ALA 5150.0034
PHE 5160.0027
ASN 5170.0037
SER 5180.0032
LEU 5190.0017
SER 5200.0024
SER 5210.0015
LEU 5220.0011
GLN 5230.0022
VAL 5240.0032
LEU 5250.0033
ASN 5260.0044
MET 5270.0053
SER 5280.0060
HIS 5290.0072
ASN 5300.0074
ASN 5310.0085
PHE 5320.0086
PHE 5330.0088
SER 5340.0082
LEU 5350.0075
ASP 5360.0076
THR 5370.0066
PHE 5380.0065
PRO 5390.0060
TYR 5400.0058
LYS 5410.0058
CYS 5420.0049
LEU 5430.0041
ASN 5440.0040
SER 5450.0031
LEU 5460.0040
GLN 5470.0052
VAL 5480.0056
LEU 5490.0062
ASP 5500.0066
TYR 5510.0072
SER 5520.0073
LEU 5530.0079
ASN 5540.0082
HIS 5550.0084
ILE 5560.0078
MET 5570.0067
THR 5580.0067
SER 5590.0070
LYS 5600.0082
LYS 5610.0086
GLN 5620.0075
GLU 5630.0067
LEU 5640.0064
GLN 5650.0060
HIS 5660.0057
PHE 5670.0064
PRO 5680.0060
SER 5690.0064
SER 5700.0058
LEU 5710.0061
ALA 5720.0065
PHE 5730.0068
LEU 5740.0069
ASN 5750.0072
LEU 5760.0070
THR 5770.0070
GLN 5780.0077
ASN 5790.0071
ASP 5800.0064
PHE 5810.0049
ALA 5820.0022
CYS 5830.0027
THR 5840.0037
CYS 5850.0065
GLU 5860.0058
HIS 5870.0036
GLN 5880.0047
SER 5890.0064
PHE 5900.0048
LEU 5910.0013
GLN 5920.0027
TRP 5930.0038
ILE 5940.0024
LYS 5950.0005
ASP 5960.0031
GLN 5970.0036
ARG 5980.0029
GLN 5990.0040
LEU 6000.0058
LEU 6010.0056
VAL 6020.0073
GLU 6030.0077
VAL 6040.0054
GLU 6050.0074
ARG 6060.0083
MET 6070.0069
GLU 6080.0075
CYS 6090.0060
ALA 6100.0076
THR 6110.0058
PRO 6120.0078
SER 6130.0127
ASP 6140.0149
LYS 6150.0115
GLN 6160.0123
GLY 6170.0123
MET 6180.0105
PRO 6190.0084
VAL 6200.0047
LEU 6210.0042
SER 6220.0092
LEU 6230.0088
ASN 6240.0113
ILE 6250.0101
THR 6260.0143
CYS 6270.0288
GLU 10.0088
ALA 20.0096
ALA 30.0103
ALA 40.0059
LYS 50.0052
MET 60.0083
GLN 70.0075
ARG 80.0057
LEU 90.0085
VAL 100.0108
LEU 110.0085
LEU 120.0092
LEU 130.0087
ALA 140.0076
ILE 150.0079
SER 160.0055
LEU 170.0027
LEU 180.0031
LEU 190.0053
TYR 200.0037
GLN 210.0033
ASP 220.0042
LEU 230.0035
PRO 240.0039
VAL 250.0032
ARG 260.0038
SER 270.0033
GLU 280.0026
PHE 290.0022
GLU 300.0026
LEU 310.0032
ASP 320.0022
ARG 330.0022
ILE 340.0030
CYS 350.0031
GLY 360.0044
TYR 370.0057
GLY 380.0042
THR 390.0042
ALA 400.0031
ARG 410.0027
CYS 420.0024
ARG 430.0039
LYS 440.0069
LYS 450.0077
CYS 460.0058
ARG 470.0048
SER 480.0059
GLN 490.0054
GLU 500.0059
TYR 510.0071
ARG 520.0080
ILE 530.0088
GLY 540.0090
ARG 550.0083
CYS 560.0055
PRO 570.0049
ASN 580.0052
THR 590.0079
TYR 600.0068
ALA 610.0061
CYS 620.0051
CYS 630.0049
LEU 640.0056
ARG 650.0053
LYS 660.0059
TRP 670.0056
ASP 680.0043
GLU 690.0037
SER 700.0032
LEU 710.0039
LEU 720.0042
ASN 730.0036
ARG 740.0042
THR 750.0051
LYS 760.0040
PRO 770.0049
GLU 780.0045
ALA 790.0062
ALA 800.0074
ALA 810.0182
LYS 820.0108
LYS 830.0127
GLU 840.0075
MET 850.0087
ASN 860.0054
LEU 870.0064
SER 880.0047
VAL 890.0047
GLY 900.0037
LEU 910.0026
GLY 920.0016
GLY 930.0036
GLY 940.0047
SER 950.0026
ASN 960.0035
LEU 970.0027
SER 980.0019
VAL 990.0041
GLY 1000.0030
LEU 1010.0065
GLY 1020.0039
GLU 1030.0061
ILE 1040.0090
GLY 1050.0144
GLY 1060.0237
GLY 1070.0153
SER 1080.0116
LYS 1090.0074
LEU 1100.0121
LEU 1110.0167
ASP 1120.0185
ILE 1130.0129
ASN 1140.0165
LEU 1150.0116
GLY 1160.0337
ARG 1170.0428
GLY 1180.0424
GLY 1190.0336
GLY 1200.0189
SER 1210.0050
MET 1220.0026
VAL 1230.0038
ASP 1240.0074
LEU 1250.0118
THR 1260.0159
PHE 1270.0190
GLY 1280.0232
GLY 1290.0246
VAL 1300.0293
GLY 1310.0276
GLY 1320.0310
GLY 1330.0291
SER 1340.0329
THR 1350.0313
PHE 1360.0272
THR 1370.0272
PHE 1380.0193
PHE 1390.0231
PRO 1400.0227
LEU 1410.0221
VAL 1420.0496
ILE 1430.0666
GLY 1440.0958
GLY 1450.1270
GLY 1460.1130
SER 1470.0826
ASP 1480.0480
ALA 1490.0384
MET 1500.0143
TYR 1510.0119
LEU 1520.0072
GLY 1530.0105
PHE 1540.0187
ALA 1550.0272
ALA 1560.0418
GLY 1570.0381
GLY 1580.0327
GLY 1590.0284
SER 1600.0233
ALA 1610.0185
GLY 1620.0119
GLY 1630.0073
GLU 1640.0120
ASN 1650.0077
HIS 1660.0107
VAL 1670.0063
ALA 1680.0036
PHE 1690.0041
GLY 1700.0076
PRO 1710.0502
GLY 1720.0567
PRO 1730.0568
GLY 1740.0349
VAL 1750.0127
ASP 1760.0099
LEU 1770.0062
THR 1780.0067
PHE 1790.0031
GLY 1800.0058
GLY 1810.0164
VAL 1820.0166
GLN 1830.0154
PHE 1840.0146
ALA 1850.0158
MET 1860.0180
VAL 1870.0274
ASN 1880.0176
ASN 1890.0259
GLY 1900.0148
PRO 1910.0247
GLY 1920.0286
PRO 1930.0306
GLY 1940.0264
GLU 1950.0204
SER 1960.0260
PHE 1970.0169
THR 1980.0137
ALA 1990.0116
GLN 2000.0022
PRO 2010.0044
ALA 2020.0074
ASP 2030.0111
MET 2040.0073
GLN 2050.0046
ALA 2060.0046
GLY 2070.0127
ILE 2080.0112
LYS 2090.0101
GLY 2100.0204
PRO 2110.0136
GLY 2120.0263
PRO 2130.0135
GLY 2140.0208
GLY 2150.0378
SER 2160.0164
ILE 2170.0293
GLN 2180.0252
VAL 2190.0129
ILE 2200.0266
ASN 2210.0203
GLY 2220.0212
SER 2230.0228
THR 2240.0185
ILE 2250.0218
GLY 2260.0314
THR 2270.0267
GLY 2280.0126
SER 2290.0104
LYS 2300.0103
LYS 2310.0095
THR 2320.0163
ILE 2330.0089
LEU 2340.0140
ILE 2350.0108
TYR 2360.0144
SER 2370.0161
ILE 2380.0167
ILE 2390.0144
GLY 2400.0160
VAL 2410.0170
LYS 2420.0128
LYS 2430.0130
GLY 2440.0147
THR 2450.0137
LEU 2460.0130
ALA 2470.0117
TRP 2480.0119
ALA 2490.0129
ARG 2500.0126
THR 2510.0188
GLY 2520.0188
PHE 2530.0201
SER 2540.0212
PRO 2550.0198
ALA 2560.0173
LYS 2570.0142
LYS 2580.0156
LEU 2590.0314
ASN 2600.0424
ALA 2610.0462
GLY 2620.0285
VAL 2630.0196
VAL 2640.0128
ARG 2650.0168
VAL 2660.0085
PHE 2670.0115
PHE 2680.0124
LEU 2690.0161
ASN 2700.0168
GLN 2710.0139
LYS 2720.0098
LYS 2730.0122
ALA 2740.0150
LYS 2750.0122
ASP 2760.0125
VAL 2770.0123
LEU 2780.0123
ARG 2790.0126
LYS 2800.0127
THR 2810.0086
SER 2820.0043
ARG 2830.0087
PRO 2840.0133
MET 2850.0132
VAL 2860.0168
ASP 2870.0057
LEU 2880.0041
THR 2890.0114
PHE 2900.0184
GLY 2910.0128
GLY 2920.0261

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.