CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 67  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0720
GLU 270.0078
PRO 280.0076
CYS 290.0068
VAL 300.0086
GLU 310.0101
VAL 320.0110
VAL 330.0121
PRO 340.0119
ASN 350.0101
ILE 360.0101
THR 370.0088
TYR 380.0070
GLN 390.0058
CYS 400.0039
MET 410.0029
GLU 420.0019
LEU 430.0028
ASN 440.0022
PHE 450.0015
TYR 460.0015
LYS 470.0005
ILE 480.0013
PRO 490.0027
ASP 500.0030
ASN 510.0049
LEU 520.0052
PRO 530.0063
PHE 540.0058
SER 550.0074
THR 560.0068
LYS 570.0073
ASN 580.0065
LEU 590.0048
ASP 600.0039
LEU 610.0023
SER 620.0024
PHE 630.0014
ASN 640.0007
PRO 650.0014
LEU 660.0016
ARG 670.0025
HIS 680.0029
LEU 690.0034
GLY 700.0040
SER 710.0049
TYR 720.0043
SER 730.0035
PHE 740.0040
PHE 750.0044
SER 760.0042
PHE 770.0046
PRO 780.0058
GLU 790.0061
LEU 800.0052
GLN 810.0056
VAL 820.0047
LEU 830.0041
ASP 840.0036
LEU 850.0033
SER 860.0032
ARG 870.0031
CYS 880.0028
GLU 890.0030
ILE 900.0032
GLN 910.0035
THR 920.0037
ILE 930.0039
GLU 940.0045
ASP 950.0051
GLY 960.0050
ALA 970.0044
TYR 980.0045
GLN 990.0052
SER 1000.0052
LEU 1010.0049
SER 1020.0057
HIS 1030.0049
LEU 1040.0041
SER 1050.0037
THR 1060.0033
LEU 1070.0038
ILE 1080.0036
LEU 1090.0037
THR 1100.0037
GLY 1110.0037
ASN 1120.0036
PRO 1130.0035
ILE 1140.0035
GLN 1150.0035
SER 1160.0035
LEU 1170.0041
ALA 1180.0047
LEU 1190.0045
GLY 1200.0044
ALA 1210.0039
PHE 1220.0036
SER 1230.0043
GLY 1240.0042
LEU 1250.0034
SER 1260.0035
SER 1270.0030
LEU 1280.0030
GLN 1290.0038
LYS 1300.0039
LEU 1310.0032
VAL 1320.0035
ALA 1330.0030
VAL 1340.0035
GLU 1350.0034
THR 1360.0028
ASN 1370.0024
LEU 1380.0011
ALA 1390.0016
SER 1400.0020
LEU 1410.0023
GLU 1420.0041
ASN 1430.0036
PHE 1440.0023
PRO 1450.0022
ILE 1460.0026
GLY 1470.0035
HIS 1480.0032
LEU 1490.0031
LYS 1500.0043
THR 1510.0048
LEU 1520.0051
LYS 1530.0064
GLU 1540.0058
LEU 1550.0044
ASN 1560.0042
VAL 1570.0027
ALA 1580.0033
HIS 1590.0030
ASN 1600.0017
LEU 1610.0009
ILE 1620.0011
GLN 1630.0022
SER 1640.0033
PHE 1650.0038
LYS 1660.0053
LEU 1670.0056
PRO 1680.0059
GLU 1690.0075
TYR 1700.0064
PHE 1710.0066
SER 1720.0081
ASN 1730.0074
LEU 1740.0066
THR 1750.0084
ASN 1760.0083
LEU 1770.0072
GLU 1780.0080
HIS 1790.0069
LEU 1800.0054
ASP 1810.0047
LEU 1820.0033
SER 1830.0035
SER 1840.0030
ASN 1850.0016
LYS 1860.0008
ILE 1870.0015
GLN 1880.0020
SER 1890.0028
ILE 1900.0038
TYR 1910.0055
CYS 1920.0072
THR 1930.0083
ASP 1940.0068
LEU 1950.0075
ARG 1960.0095
VAL 1970.0093
LEU 1980.0091
HIS 1990.0108
GLN 2000.0122
MET 2010.0116
PRO 2020.0127
LEU 2030.0130
LEU 2040.0107
ASN 2050.0106
LEU 2060.0083
SER 2070.0072
LEU 2080.0057
ASP 2090.0049
LEU 2100.0036
SER 2110.0038
LEU 2120.0033
ASN 2130.0021
PRO 2140.0022
MET 2150.0018
ASN 2160.0022
PHE 2170.0028
ILE 2180.0030
GLN 2190.0043
PRO 2200.0045
GLY 2210.0059
ALA 2220.0058
PHE 2230.0060
LYS 2240.0074
GLU 2250.0087
ILE 2260.0077
ARG 2270.0078
LEU 2280.0070
HIS 2290.0079
LYS 2300.0067
LEU 2310.0051
THR 2320.0046
LEU 2330.0038
ARG 2340.0041
ASN 2350.0037
ASN 2360.0030
PHE 2370.0033
ASP 2380.0040
SER 2390.0042
LEU 2400.0041
ASN 2410.0039
VAL 2420.0033
MET 2430.0031
LYS 2440.0030
THR 2450.0027
CYS 2460.0027
ILE 2470.0031
GLN 2480.0030
GLY 2490.0033
LEU 2500.0038
ALA 2510.0043
GLY 2520.0053
LEU 2530.0051
GLU 2540.0058
VAL 2550.0057
HIS 2560.0063
ARG 2570.0052
LEU 2580.0045
VAL 2590.0044
LEU 2600.0039
GLY 2610.0040
GLU 2620.0045
PHE 2630.0047
ARG 2640.0049
ASN 2650.0048
GLU 2660.0045
GLY 2670.0044
ASN 2680.0045
LEU 2690.0045
GLU 2700.0050
LYS 2710.0050
PHE 2720.0044
ASP 2730.0045
LYS 2740.0043
SER 2750.0040
ALA 2760.0038
LEU 2770.0034
GLU 2780.0034
GLY 2790.0031
LEU 2800.0032
CYS 2810.0032
ASN 2820.0035
LEU 2830.0037
THR 2840.0040
ILE 2850.0040
GLU 2860.0043
GLU 2870.0040
PHE 2880.0036
ARG 2890.0036
LEU 2900.0034
ALA 2910.0034
TYR 2920.0046
LEU 2930.0040
ASP 2940.0045
TYR 2950.0045
TYR 2960.0053
LEU 2970.0034
ASP 2980.0037
GLY 2990.0037
ILE 3000.0036
ILE 3010.0040
ASP 3020.0040
LEU 3030.0035
PHE 3040.0029
ASN 3050.0032
CYS 3060.0029
LEU 3070.0025
THR 3080.0025
ASN 3090.0026
VAL 3100.0020
SER 3110.0014
SER 3120.0017
PHE 3130.0015
SER 3140.0015
LEU 3150.0015
VAL 3160.0015
SER 3170.0027
VAL 3180.0029
THR 3190.0025
ILE 3200.0030
GLU 3210.0029
ARG 3220.0035
VAL 3230.0033
LYS 3240.0041
ASP 3250.0040
PHE 3260.0035
SER 3270.0034
TYR 3280.0034
ASN 3290.0035
PHE 3300.0026
GLY 3310.0025
TRP 3320.0012
GLN 3330.0015
HIS 3340.0012
LEU 3350.0009
GLU 3360.0011
LEU 3370.0010
VAL 3380.0010
ASN 3390.0011
CYS 3400.0017
LYS 3410.0024
PHE 3420.0033
GLY 3430.0038
GLN 3440.0044
PHE 3450.0045
PRO 3460.0046
THR 3470.0035
LEU 3480.0033
LYS 3490.0036
LEU 3500.0032
LYS 3510.0034
SER 3520.0029
LEU 3530.0027
LYS 3540.0034
ARG 3550.0033
LEU 3560.0032
THR 3570.0036
PHE 3580.0033
THR 3590.0035
SER 3600.0037
ASN 3610.0036
LYS 3620.0036
GLY 3630.0051
GLY 3640.0065
ASN 3650.0060
ALA 3660.0071
PHE 3670.0040
SER 3680.0038
GLU 3690.0038
VAL 3700.0039
ASP 3710.0040
LEU 3720.0035
PRO 3730.0041
SER 3740.0039
LEU 3750.0041
GLU 3760.0050
PHE 3770.0060
LEU 3780.0054
ASP 3790.0056
LEU 3800.0050
SER 3810.0053
ARG 3820.0060
ASN 3830.0055
GLY 3840.0054
LEU 3850.0049
SER 3860.0045
PHE 3870.0033
LYS 3880.0024
GLY 3890.0015
CYS 3900.0019
CYS 3910.0029
SER 3920.0037
GLN 3930.0043
SER 3940.0034
ASP 3950.0030
PHE 3960.0039
GLY 3970.0036
THR 3980.0047
ILE 3990.0059
SER 4000.0066
LEU 4010.0063
LYS 4020.0086
TYR 4030.0080
LEU 4040.0065
ASP 4050.0066
LEU 4060.0054
SER 4070.0062
PHE 4080.0071
ASN 4090.0061
GLY 4100.0056
VAL 4110.0042
ILE 4120.0030
THR 4130.0021
MET 4140.0012
SER 4150.0027
SER 4160.0035
ASN 4170.0046
PHE 4180.0052
LEU 4190.0066
GLY 4200.0076
LEU 4210.0073
GLU 4220.0095
GLN 4230.0105
LEU 4240.0092
GLU 4250.0107
HIS 4260.0097
LEU 4270.0074
ASP 4280.0071
PHE 4290.0056
GLN 4300.0072
HIS 4310.0078
SER 4320.0063
ASN 4330.0056
LEU 4340.0033
LYS 4350.0033
GLN 4360.0033
MET 4370.0023
SER 4380.0046
GLU 4390.0062
PHE 4400.0063
SER 4410.0059
VAL 4420.0041
PHE 4430.0057
LEU 4440.0079
SER 4450.0092
LEU 4460.0091
ARG 4470.0124
ASN 4480.0132
LEU 4490.0109
ILE 4500.0122
TYR 4510.0105
LEU 4520.0076
ASP 4530.0071
ILE 4540.0048
SER 4550.0066
HIS 4560.0076
THR 4570.0057
HIS 4580.0064
THR 4590.0040
ARG 4600.0052
VAL 4610.0037
ALA 4620.0066
PHE 4630.0065
ASN 4640.0067
GLY 4650.0072
ILE 4660.0043
PHE 4670.0057
ASN 4680.0085
GLY 4690.0101
LEU 4700.0096
SER 4710.0121
SER 4720.0134
LEU 4730.0108
GLU 4740.0116
VAL 4750.0100
LEU 4760.0070
LYS 4770.0068
MET 4780.0047
ALA 4790.0065
GLY 4800.0073
ASN 4810.0053
SER 4820.0054
PHE 4830.0046
GLN 4840.0068
GLU 4850.0078
ASN 4860.0060
PHE 4870.0052
LEU 4880.0033
PRO 4890.0049
ASP 4900.0057
ILE 4910.0052
PHE 4920.0061
THR 4930.0085
GLU 4940.0101
LEU 4950.0089
ARG 4960.0104
ASN 4970.0114
LEU 4980.0090
THR 4990.0097
PHE 5000.0083
LEU 5010.0056
ASP 5020.0055
LEU 5030.0039
SER 5040.0057
GLN 5050.0067
CYS 5060.0050
GLN 5070.0058
LEU 5080.0044
GLU 5090.0046
GLN 5100.0039
LEU 5110.0032
SER 5120.0057
PRO 5130.0054
THR 5140.0057
ALA 5150.0046
PHE 5160.0041
ASN 5170.0061
SER 5180.0075
LEU 5190.0064
SER 5200.0070
SER 5210.0078
LEU 5220.0056
GLN 5230.0060
VAL 5240.0054
LEU 5250.0040
ASN 5260.0042
MET 5270.0037
SER 5280.0044
HIS 5290.0047
ASN 5300.0041
ASN 5310.0042
PHE 5320.0034
PHE 5330.0030
SER 5340.0034
LEU 5350.0039
ASP 5360.0044
THR 5370.0042
PHE 5380.0047
PRO 5390.0042
TYR 5400.0031
LYS 5410.0034
CYS 5420.0038
LEU 5430.0031
ASN 5440.0034
SER 5450.0037
LEU 5460.0028
GLN 5470.0024
VAL 5480.0024
LEU 5490.0025
ASP 5500.0027
TYR 5510.0031
SER 5520.0028
LEU 5530.0024
ASN 5540.0026
HIS 5550.0023
ILE 5560.0024
MET 5570.0024
THR 5580.0035
SER 5590.0048
LYS 5600.0061
LYS 5610.0074
GLN 5620.0077
GLU 5630.0070
LEU 5640.0060
GLN 5650.0066
HIS 5660.0058
PHE 5670.0041
PRO 5680.0033
SER 5690.0032
SER 5700.0022
LEU 5710.0026
ALA 5720.0027
PHE 5730.0024
LEU 5740.0026
ASN 5750.0023
LEU 5760.0026
THR 5770.0029
GLN 5780.0025
ASN 5790.0019
ASP 5800.0027
PHE 5810.0023
ALA 5820.0055
CYS 5830.0045
THR 5840.0050
CYS 5850.0043
GLU 5860.0069
HIS 5870.0048
GLN 5880.0042
SER 5890.0062
PHE 5900.0050
LEU 5910.0036
GLN 5920.0058
TRP 5930.0066
ILE 5940.0051
LYS 5950.0070
ASP 5960.0088
GLN 5970.0076
ARG 5980.0068
GLN 5990.0078
LEU 6000.0060
LEU 6010.0044
VAL 6020.0064
GLU 6030.0065
VAL 6040.0062
GLU 6050.0071
ARG 6060.0059
MET 6070.0056
GLU 6080.0065
CYS 6090.0061
ALA 6100.0076
THR 6110.0086
PRO 6120.0111
SER 6130.0144
ASP 6140.0146
LYS 6150.0112
GLN 6160.0118
GLY 6170.0115
MET 6180.0101
PRO 6190.0087
VAL 6200.0056
LEU 6210.0076
SER 6220.0097
LEU 6230.0068
ASN 6240.0061
ILE 6250.0043
THR 6260.0036
CYS 6270.0064
GLU 10.0081
ALA 20.0048
ALA 30.0082
ALA 40.0057
LYS 50.0020
MET 60.0062
GLN 70.0058
ARG 80.0040
LEU 90.0068
VAL 100.0083
LEU 110.0063
LEU 120.0066
LEU 130.0061
ALA 140.0052
ILE 150.0052
SER 160.0041
LEU 170.0037
LEU 180.0030
LEU 190.0040
TYR 200.0068
GLN 210.0067
ASP 220.0036
LEU 230.0042
PRO 240.0051
VAL 250.0084
ARG 260.0074
SER 270.0051
GLU 280.0064
PHE 290.0056
GLU 300.0029
LEU 310.0027
ASP 320.0033
ARG 330.0016
ILE 340.0017
CYS 350.0032
GLY 360.0040
TYR 370.0046
GLY 380.0023
THR 390.0027
ALA 400.0015
ARG 410.0018
CYS 420.0024
ARG 430.0046
LYS 440.0069
LYS 450.0065
CYS 460.0066
ARG 470.0078
SER 480.0087
GLN 490.0085
GLU 500.0072
TYR 510.0065
ARG 520.0029
ILE 530.0047
GLY 540.0046
ARG 550.0057
CYS 560.0065
PRO 570.0103
ASN 580.0107
THR 590.0098
TYR 600.0066
ALA 610.0016
CYS 620.0005
CYS 630.0023
LEU 640.0036
ARG 650.0058
LYS 660.0082
TRP 670.0075
ASP 680.0063
GLU 690.0054
SER 700.0047
LEU 710.0050
LEU 720.0052
ASN 730.0042
ARG 740.0042
THR 750.0051
LYS 760.0049
PRO 770.0057
GLU 780.0051
ALA 790.0061
ALA 800.0074
ALA 810.0188
LYS 820.0189
LYS 830.0117
GLU 840.0195
MET 850.0125
ASN 860.0145
LEU 870.0082
SER 880.0119
VAL 890.0078
GLY 900.0159
LEU 910.0203
GLY 920.0407
GLY 930.0697
GLY 940.0720
SER 950.0557
ASN 960.0312
LEU 970.0267
SER 980.0256
VAL 990.0241
GLY 1000.0264
LEU 1010.0228
GLY 1020.0212
GLU 1030.0259
ILE 1040.0261
GLY 1050.0332
GLY 1060.0390
GLY 1070.0307
SER 1080.0267
LYS 1090.0175
LEU 1100.0117
LEU 1110.0099
ASP 1120.0080
ILE 1130.0051
ASN 1140.0034
LEU 1150.0007
GLY 1160.0209
ARG 1170.0347
GLY 1180.0327
GLY 1190.0214
GLY 1200.0036
SER 1210.0070
MET 1220.0118
VAL 1230.0122
ASP 1240.0157
LEU 1250.0173
THR 1260.0216
PHE 1270.0244
GLY 1280.0258
GLY 1290.0306
VAL 1300.0320
GLY 1310.0274
GLY 1320.0262
GLY 1330.0222
SER 1340.0250
THR 1350.0219
PHE 1360.0188
THR 1370.0162
PHE 1380.0146
PHE 1390.0147
PRO 1400.0128
LEU 1410.0177
VAL 1420.0220
ILE 1430.0265
GLY 1440.0384
GLY 1450.0437
GLY 1460.0333
SER 1470.0250
ASP 1480.0141
ALA 1490.0200
MET 1500.0181
TYR 1510.0213
LEU 1520.0213
GLY 1530.0242
PHE 1540.0247
ALA 1550.0264
ALA 1560.0263
GLY 1570.0241
GLY 1580.0207
GLY 1590.0200
SER 1600.0191
ALA 1610.0226
GLY 1620.0240
GLY 1630.0227
GLU 1640.0244
ASN 1650.0202
HIS 1660.0195
VAL 1670.0188
ALA 1680.0195
PHE 1690.0197
GLY 1700.0201
PRO 1710.0462
GLY 1720.0488
PRO 1730.0471
GLY 1740.0301
VAL 1750.0143
ASP 1760.0163
LEU 1770.0062
THR 1780.0136
PHE 1790.0064
GLY 1800.0140
GLY 1810.0419
VAL 1820.0431
GLN 1830.0402
PHE 1840.0356
ALA 1850.0399
MET 1860.0233
VAL 1870.0256
ASN 1880.0195
ASN 1890.0156
GLY 1900.0343
PRO 1910.0652
GLY 1920.0567
PRO 1930.0249
GLY 1940.0313
GLU 1950.0351
SER 1960.0503
PHE 1970.0333
THR 1980.0255
ALA 1990.0165
GLN 2000.0040
PRO 2010.0101
ALA 2020.0132
ASP 2030.0186
MET 2040.0145
GLN 2050.0105
ALA 2060.0125
GLY 2070.0191
ILE 2080.0213
LYS 2090.0223
GLY 2100.0321
PRO 2110.0161
GLY 2120.0053
PRO 2130.0228
GLY 2140.0255
GLY 2150.0234
SER 2160.0269
ILE 2170.0187
GLN 2180.0233
VAL 2190.0196
ILE 2200.0299
ASN 2210.0298
GLY 2220.0211
SER 2230.0212
THR 2240.0152
ILE 2250.0105
GLY 2260.0175
THR 2270.0159
GLY 2280.0161
SER 2290.0222
LYS 2300.0164
LYS 2310.0155
THR 2320.0152
ILE 2330.0152
LEU 2340.0152
ILE 2350.0148
TYR 2360.0175
SER 2370.0217
ILE 2380.0213
ILE 2390.0261
GLY 2400.0257
VAL 2410.0154
LYS 2420.0127
LYS 2430.0125
GLY 2440.0126
THR 2450.0114
LEU 2460.0164
ALA 2470.0266
TRP 2480.0285
ALA 2490.0378
ARG 2500.0393
THR 2510.0395
GLY 2520.0344
PHE 2530.0203
SER 2540.0165
PRO 2550.0144
ALA 2560.0197
LYS 2570.0247
LYS 2580.0198
LEU 2590.0144
ASN 2600.0115
ALA 2610.0182
GLY 2620.0098
VAL 2630.0086
VAL 2640.0051
ARG 2650.0060
VAL 2660.0067
PHE 2670.0057
PHE 2680.0072
LEU 2690.0039
ASN 2700.0085
GLN 2710.0074
LYS 2720.0067
LYS 2730.0068
ALA 2740.0066
LYS 2750.0079
ASP 2760.0099
VAL 2770.0082
LEU 2780.0081
ARG 2790.0107
LYS 2800.0113
THR 2810.0053
SER 2820.0026
ARG 2830.0046
PRO 2840.0079
MET 2850.0111
VAL 2860.0142
ASP 2870.0077
LEU 2880.0053
THR 2890.0074
PHE 2900.0133
GLY 2910.0112
GLY 2920.0194

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.