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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 68  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0736
GLU 270.0090
PRO 280.0104
CYS 290.0082
VAL 300.0103
GLU 310.0099
VAL 320.0116
VAL 330.0107
PRO 340.0084
ASN 350.0048
ILE 360.0068
THR 370.0071
TYR 380.0059
GLN 390.0069
CYS 400.0048
MET 410.0058
GLU 420.0061
LEU 430.0063
ASN 440.0054
PHE 450.0038
TYR 460.0043
LYS 470.0032
ILE 480.0020
PRO 490.0025
ASP 500.0041
ASN 510.0047
LEU 520.0022
PRO 530.0006
PHE 540.0030
SER 550.0040
THR 560.0037
LYS 570.0058
ASN 580.0059
LEU 590.0040
ASP 600.0044
LEU 610.0024
SER 620.0037
PHE 630.0034
ASN 640.0017
PRO 650.0006
LEU 660.0013
ARG 670.0024
HIS 680.0029
LEU 690.0033
GLY 700.0037
SER 710.0042
TYR 720.0048
SER 730.0038
PHE 740.0040
PHE 750.0049
SER 760.0044
PHE 770.0044
PRO 780.0061
GLU 790.0061
LEU 800.0054
GLN 810.0063
VAL 820.0053
LEU 830.0046
ASP 840.0043
LEU 850.0038
SER 860.0041
ARG 870.0033
CYS 880.0028
GLU 890.0030
ILE 900.0032
GLN 910.0037
THR 920.0033
ILE 930.0035
GLU 940.0036
ASP 950.0037
GLY 960.0040
ALA 970.0043
TYR 980.0047
GLN 990.0052
SER 1000.0055
LEU 1010.0053
SER 1020.0055
HIS 1030.0058
LEU 1040.0053
SER 1050.0049
THR 1060.0046
LEU 1070.0041
ILE 1080.0040
LEU 1090.0040
THR 1100.0039
GLY 1110.0038
ASN 1120.0039
PRO 1130.0042
ILE 1140.0040
GLN 1150.0042
SER 1160.0040
LEU 1170.0033
ALA 1180.0032
LEU 1190.0026
GLY 1200.0029
ALA 1210.0032
PHE 1220.0034
SER 1230.0034
GLY 1240.0038
LEU 1250.0038
SER 1260.0038
SER 1270.0028
LEU 1280.0026
GLN 1290.0035
LYS 1300.0036
LEU 1310.0024
VAL 1320.0026
ALA 1330.0024
VAL 1340.0029
GLU 1350.0034
THR 1360.0034
ASN 1370.0042
LEU 1380.0030
ALA 1390.0035
SER 1400.0034
LEU 1410.0031
GLU 1420.0045
ASN 1430.0042
PHE 1440.0029
PRO 1450.0029
ILE 1460.0027
GLY 1470.0031
HIS 1480.0030
LEU 1490.0024
LYS 1500.0036
THR 1510.0040
LEU 1520.0038
LYS 1530.0053
GLU 1540.0045
LEU 1550.0028
ASN 1560.0027
VAL 1570.0018
ALA 1580.0024
HIS 1590.0029
ASN 1600.0024
LEU 1610.0027
ILE 1620.0021
GLN 1630.0025
SER 1640.0033
PHE 1650.0036
LYS 1660.0049
LEU 1670.0051
PRO 1680.0058
GLU 1690.0074
TYR 1700.0064
PHE 1710.0061
SER 1720.0076
ASN 1730.0068
LEU 1740.0058
THR 1750.0076
ASN 1760.0073
LEU 1770.0058
GLU 1780.0066
HIS 1790.0055
LEU 1800.0041
ASP 1810.0035
LEU 1820.0027
SER 1830.0029
SER 1840.0027
ASN 1850.0017
LYS 1860.0017
ILE 1870.0022
GLN 1880.0021
SER 1890.0025
ILE 1900.0033
TYR 1910.0040
CYS 1920.0056
THR 1930.0065
ASP 1940.0055
LEU 1950.0063
ARG 1960.0078
VAL 1970.0078
LEU 1980.0076
HIS 1990.0089
GLN 2000.0101
MET 2010.0097
PRO 2020.0101
LEU 2030.0104
LEU 2040.0087
ASN 2050.0086
LEU 2060.0068
SER 2070.0056
LEU 2080.0047
ASP 2090.0042
LEU 2100.0034
SER 2110.0035
LEU 2120.0032
ASN 2130.0027
PRO 2140.0026
MET 2150.0026
ASN 2160.0025
PHE 2170.0028
ILE 2180.0031
GLN 2190.0033
PRO 2200.0037
GLY 2210.0044
ALA 2220.0040
PHE 2230.0046
LYS 2240.0052
GLU 2250.0060
ILE 2260.0056
ARG 2270.0051
LEU 2280.0047
HIS 2290.0052
LYS 2300.0046
LEU 2310.0039
THR 2320.0033
LEU 2330.0034
ARG 2340.0034
ASN 2350.0035
ASN 2360.0036
PHE 2370.0041
ASP 2380.0046
SER 2390.0047
LEU 2400.0046
ASN 2410.0049
VAL 2420.0044
MET 2430.0042
LYS 2440.0044
THR 2450.0043
CYS 2460.0040
ILE 2470.0042
GLN 2480.0043
GLY 2490.0040
LEU 2500.0041
ALA 2510.0044
GLY 2520.0044
LEU 2530.0040
GLU 2540.0039
VAL 2550.0036
HIS 2560.0034
ARG 2570.0025
LEU 2580.0025
VAL 2590.0025
LEU 2600.0026
GLY 2610.0026
GLU 2620.0029
PHE 2630.0030
ARG 2640.0032
ASN 2650.0035
GLU 2660.0038
GLY 2670.0045
ASN 2680.0041
LEU 2690.0041
GLU 2700.0044
LYS 2710.0040
PHE 2720.0036
ASP 2730.0038
LYS 2740.0036
SER 2750.0040
ALA 2760.0036
LEU 2770.0037
GLU 2780.0042
GLY 2790.0041
LEU 2800.0037
CYS 2810.0041
ASN 2820.0042
LEU 2830.0038
THR 2840.0032
ILE 2850.0027
GLU 2860.0021
GLU 2870.0020
PHE 2880.0019
ARG 2890.0018
LEU 2900.0017
ALA 2910.0015
TYR 2920.0012
LEU 2930.0017
ASP 2940.0028
TYR 2950.0027
TYR 2960.0025
LEU 2970.0028
ASP 2980.0031
GLY 2990.0026
ILE 3000.0024
ILE 3010.0026
ASP 3020.0031
LEU 3030.0028
PHE 3040.0027
ASN 3050.0031
CYS 3060.0034
LEU 3070.0028
THR 3080.0029
ASN 3090.0035
VAL 3100.0031
SER 3110.0034
SER 3120.0030
PHE 3130.0026
SER 3140.0024
LEU 3150.0021
VAL 3160.0020
SER 3170.0018
VAL 3180.0019
THR 3190.0023
ILE 3200.0024
GLU 3210.0031
ARG 3220.0033
VAL 3230.0028
LYS 3240.0030
ASP 3250.0028
PHE 3260.0025
SER 3270.0026
TYR 3280.0024
ASN 3290.0025
PHE 3300.0027
GLY 3310.0032
TRP 3320.0034
GLN 3330.0039
HIS 3340.0038
LEU 3350.0032
GLU 3360.0032
LEU 3370.0034
VAL 3380.0037
ASN 3390.0033
CYS 3400.0029
LYS 3410.0029
PHE 3420.0027
GLY 3430.0036
GLN 3440.0036
PHE 3450.0033
PRO 3460.0027
THR 3470.0030
LEU 3480.0029
LYS 3490.0029
LEU 3500.0029
LYS 3510.0030
SER 3520.0035
LEU 3530.0036
LYS 3540.0043
ARG 3550.0044
LEU 3560.0040
THR 3570.0049
PHE 3580.0048
THR 3590.0054
SER 3600.0061
ASN 3610.0055
LYS 3620.0028
GLY 3630.0018
GLY 3640.0022
ASN 3650.0029
ALA 3660.0041
PHE 3670.0044
SER 3680.0038
GLU 3690.0036
VAL 3700.0032
ASP 3710.0032
LEU 3720.0032
PRO 3730.0032
SER 3740.0035
LEU 3750.0039
GLU 3760.0045
PHE 3770.0057
LEU 3780.0056
ASP 3790.0065
LEU 3800.0063
SER 3810.0075
ARG 3820.0091
ASN 3830.0078
GLY 3840.0080
LEU 3850.0063
SER 3860.0063
PHE 3870.0073
LYS 3880.0077
GLY 3890.0076
CYS 3900.0064
CYS 3910.0051
SER 3920.0036
GLN 3930.0031
SER 3940.0033
ASP 3950.0034
PHE 3960.0034
GLY 3970.0029
THR 3980.0035
ILE 3990.0035
SER 4000.0045
LEU 4010.0044
LYS 4020.0058
TYR 4030.0064
LEU 4040.0061
ASP 4050.0080
LEU 4060.0082
SER 4070.0106
PHE 4080.0131
ASN 4090.0113
GLY 4100.0120
VAL 4110.0118
ILE 4120.0114
THR 4130.0117
MET 4140.0096
SER 4150.0100
SER 4160.0076
ASN 4170.0061
PHE 4180.0037
LEU 4190.0050
GLY 4200.0047
LEU 4210.0038
GLU 4220.0044
GLN 4230.0062
LEU 4240.0051
GLU 4250.0070
HIS 4260.0075
LEU 4270.0066
ASP 4280.0094
PHE 4290.0109
GLN 4300.0139
HIS 4310.0169
SER 4320.0150
ASN 4330.0163
LEU 4340.0136
LYS 4350.0152
GLN 4360.0149
MET 4370.0122
SER 4380.0145
GLU 4390.0164
PHE 4400.0139
SER 4410.0103
VAL 4420.0079
PHE 4430.0047
LEU 4440.0074
SER 4450.0069
LEU 4460.0051
ARG 4470.0090
ASN 4480.0096
LEU 4490.0068
ILE 4500.0094
TYR 4510.0087
LEU 4520.0064
ASP 4530.0096
ILE 4540.0105
SER 4550.0139
HIS 4560.0178
THR 4570.0163
HIS 4580.0185
THR 4590.0150
ARG 4600.0162
VAL 4610.0131
ALA 4620.0160
PHE 4630.0146
ASN 4640.0131
GLY 4650.0120
ILE 4660.0088
PHE 4670.0059
ASN 4680.0093
GLY 4690.0094
LEU 4700.0074
SER 4710.0115
SER 4720.0124
LEU 4730.0090
GLU 4740.0114
VAL 4750.0099
LEU 4760.0060
LYS 4770.0085
MET 4780.0085
ALA 4790.0117
GLY 4800.0150
ASN 4810.0135
SER 4820.0124
PHE 4830.0108
GLN 4840.0149
GLU 4850.0146
ASN 4860.0101
PHE 4870.0080
LEU 4880.0057
PRO 4890.0077
ASP 4900.0083
ILE 4910.0062
PHE 4920.0072
THR 4930.0112
GLU 4940.0119
LEU 4950.0100
ARG 4960.0136
ASN 4970.0141
LEU 4980.0111
THR 4990.0132
PHE 5000.0110
LEU 5010.0072
ASP 5020.0074
LEU 5030.0051
SER 5040.0083
GLN 5050.0106
CYS 5060.0085
GLN 5070.0083
LEU 5080.0048
GLU 5090.0038
GLN 5100.0037
LEU 5110.0040
SER 5120.0071
PRO 5130.0072
THR 5140.0088
ALA 5150.0068
PHE 5160.0075
ASN 5170.0102
SER 5180.0120
LEU 5190.0109
SER 5200.0134
SER 5210.0141
LEU 5220.0109
GLN 5230.0120
VAL 5240.0105
LEU 5250.0079
ASN 5260.0074
MET 5270.0051
SER 5280.0057
HIS 5290.0055
ASN 5300.0044
ASN 5310.0037
PHE 5320.0072
PHE 5330.0075
SER 5340.0071
LEU 5350.0066
ASP 5360.0068
THR 5370.0055
PHE 5380.0058
PRO 5390.0061
TYR 5400.0058
LYS 5410.0057
CYS 5420.0084
LEU 5430.0085
ASN 5440.0102
SER 5450.0106
LEU 5460.0091
GLN 5470.0076
VAL 5480.0073
LEU 5490.0067
ASP 5500.0065
TYR 5510.0058
SER 5520.0052
LEU 5530.0062
ASN 5540.0070
HIS 5550.0079
ILE 5560.0074
MET 5570.0086
THR 5580.0086
SER 5590.0095
LYS 5600.0129
LYS 5610.0143
GLN 5620.0126
GLU 5630.0101
LEU 5640.0085
GLN 5650.0086
HIS 5660.0062
PHE 5670.0045
PRO 5680.0047
SER 5690.0048
SER 5700.0052
LEU 5710.0050
ALA 5720.0021
PHE 5730.0029
LEU 5740.0029
ASN 5750.0039
LEU 5760.0035
THR 5770.0058
GLN 5780.0087
ASN 5790.0087
ASP 5800.0107
PHE 5810.0088
ALA 5820.0130
CYS 5830.0072
THR 5840.0085
CYS 5850.0098
GLU 5860.0167
HIS 5870.0113
GLN 5880.0100
SER 5890.0138
PHE 5900.0090
LEU 5910.0046
GLN 5920.0105
TRP 5930.0102
ILE 5940.0057
LYS 5950.0119
ASP 5960.0147
GLN 5970.0107
ARG 5980.0105
GLN 5990.0116
LEU 6000.0066
LEU 6010.0062
VAL 6020.0072
GLU 6030.0103
VAL 6040.0102
GLU 6050.0138
ARG 6060.0129
MET 6070.0107
GLU 6080.0146
CYS 6090.0139
ALA 6100.0196
THR 6110.0208
PRO 6120.0224
SER 6130.0307
ASP 6140.0283
LYS 6150.0219
GLN 6160.0263
GLY 6170.0254
MET 6180.0208
PRO 6190.0173
VAL 6200.0097
LEU 6210.0132
SER 6220.0194
LEU 6230.0122
ASN 6240.0119
ILE 6250.0114
THR 6260.0132
CYS 6270.0123
GLU 10.0118
ALA 20.0029
ALA 30.0074
ALA 40.0067
LYS 50.0030
MET 60.0077
GLN 70.0069
ARG 80.0031
LEU 90.0079
VAL 100.0100
LEU 110.0062
LEU 120.0059
LEU 130.0046
ALA 140.0036
ILE 150.0036
SER 160.0063
LEU 170.0095
LEU 180.0070
LEU 190.0035
TYR 200.0124
GLN 210.0134
ASP 220.0065
LEU 230.0053
PRO 240.0089
VAL 250.0176
ARG 260.0111
SER 270.0088
GLU 280.0095
PHE 290.0087
GLU 300.0064
LEU 310.0060
ASP 320.0063
ARG 330.0056
ILE 340.0049
CYS 350.0048
GLY 360.0052
TYR 370.0053
GLY 380.0046
THR 390.0038
ALA 400.0050
ARG 410.0022
CYS 420.0031
ARG 430.0057
LYS 440.0078
LYS 450.0093
CYS 460.0091
ARG 470.0091
SER 480.0097
GLN 490.0083
GLU 500.0080
TYR 510.0082
ARG 520.0071
ILE 530.0070
GLY 540.0066
ARG 550.0052
CYS 560.0042
PRO 570.0066
ASN 580.0062
THR 590.0036
TYR 600.0040
ALA 610.0045
CYS 620.0039
CYS 630.0046
LEU 640.0044
ARG 650.0054
LYS 660.0079
TRP 670.0078
ASP 680.0065
GLU 690.0060
SER 700.0054
LEU 710.0056
LEU 720.0064
ASN 730.0055
ARG 740.0042
THR 750.0051
LYS 760.0061
PRO 770.0065
GLU 780.0066
ALA 790.0096
ALA 800.0102
ALA 810.0144
LYS 820.0122
LYS 830.0110
GLU 840.0100
MET 850.0081
ASN 860.0080
LEU 870.0040
SER 880.0060
VAL 890.0031
GLY 900.0063
LEU 910.0059
GLY 920.0117
GLY 930.0162
GLY 940.0198
SER 950.0138
ASN 960.0102
LEU 970.0076
SER 980.0095
VAL 990.0075
GLY 1000.0101
LEU 1010.0072
GLY 1020.0095
GLU 1030.0079
ILE 1040.0060
GLY 1050.0053
GLY 1060.0145
GLY 1070.0145
SER 1080.0150
LYS 1090.0123
LEU 1100.0133
LEU 1110.0098
ASP 1120.0111
ILE 1130.0085
ASN 1140.0100
LEU 1150.0083
GLY 1160.0201
ARG 1170.0247
GLY 1180.0277
GLY 1190.0216
GLY 1200.0119
SER 1210.0128
MET 1220.0122
VAL 1230.0087
ASP 1240.0070
LEU 1250.0046
THR 1260.0042
PHE 1270.0043
GLY 1280.0065
GLY 1290.0073
VAL 1300.0084
GLY 1310.0117
GLY 1320.0099
GLY 1330.0057
SER 1340.0064
THR 1350.0062
PHE 1360.0102
THR 1370.0103
PHE 1380.0095
PHE 1390.0095
PRO 1400.0091
LEU 1410.0077
VAL 1420.0162
ILE 1430.0168
GLY 1440.0261
GLY 1450.0310
GLY 1460.0122
SER 1470.0078
ASP 1480.0049
ALA 1490.0062
MET 1500.0073
TYR 1510.0047
LEU 1520.0061
GLY 1530.0063
PHE 1540.0085
ALA 1550.0089
ALA 1560.0109
GLY 1570.0081
GLY 1580.0049
GLY 1590.0061
SER 1600.0080
ALA 1610.0058
GLY 1620.0064
GLY 1630.0061
GLU 1640.0049
ASN 1650.0044
HIS 1660.0046
VAL 1670.0080
ALA 1680.0101
PHE 1690.0134
GLY 1700.0156
PRO 1710.0414
GLY 1720.0434
PRO 1730.0431
GLY 1740.0264
VAL 1750.0134
ASP 1760.0072
LEU 1770.0049
THR 1780.0030
PHE 1790.0030
GLY 1800.0044
GLY 1810.0123
VAL 1820.0128
GLN 1830.0106
PHE 1840.0093
ALA 1850.0092
MET 1860.0121
VAL 1870.0155
ASN 1880.0073
ASN 1890.0169
GLY 1900.0092
PRO 1910.0467
GLY 1920.0325
PRO 1930.0086
GLY 1940.0137
GLU 1950.0227
SER 1960.0332
PHE 1970.0231
THR 1980.0146
ALA 1990.0083
GLN 2000.0061
PRO 2010.0080
ALA 2020.0087
ASP 2030.0126
MET 2040.0112
GLN 2050.0068
ALA 2060.0143
GLY 2070.0107
ILE 2080.0071
LYS 2090.0032
GLY 2100.0009
PRO 2110.0078
GLY 2120.0073
PRO 2130.0129
GLY 2140.0116
GLY 2150.0110
SER 2160.0098
ILE 2170.0099
GLN 2180.0099
VAL 2190.0188
ILE 2200.0202
ASN 2210.0256
GLY 2220.0213
SER 2230.0129
THR 2240.0133
ILE 2250.0179
GLY 2260.0287
THR 2270.0245
GLY 2280.0112
SER 2290.0070
LYS 2300.0131
LYS 2310.0093
THR 2320.0125
ILE 2330.0166
LEU 2340.0149
ILE 2350.0264
TYR 2360.0243
SER 2370.0257
ILE 2380.0222
ILE 2390.0151
GLY 2400.0138
VAL 2410.0065
LYS 2420.0032
LYS 2430.0081
GLY 2440.0139
THR 2450.0120
LEU 2460.0167
ALA 2470.0100
TRP 2480.0061
ALA 2490.0114
ARG 2500.0130
THR 2510.0221
GLY 2520.0174
PHE 2530.0154
SER 2540.0109
PRO 2550.0140
ALA 2560.0146
LYS 2570.0143
LYS 2580.0210
LEU 2590.0325
ASN 2600.0405
ALA 2610.0300
GLY 2620.0269
VAL 2630.0143
VAL 2640.0229
ARG 2650.0161
VAL 2660.0177
PHE 2670.0203
PHE 2680.0269
LEU 2690.0303
ASN 2700.0402
GLN 2710.0228
LYS 2720.0243
LYS 2730.0350
ALA 2740.0275
LYS 2750.0248
ASP 2760.0432
VAL 2770.0379
LEU 2780.0285
ARG 2790.0450
LYS 2800.0545
THR 2810.0286
SER 2820.0219
ARG 2830.0189
PRO 2840.0399
MET 2850.0529
VAL 2860.0648
ASP 2870.0472
LEU 2880.0116
THR 2890.0103
PHE 2900.0478
GLY 2910.0299
GLY 2920.0736

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.