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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0898
GLU 270.0137
PRO 280.0144
CYS 290.0104
VAL 300.0136
GLU 310.0132
VAL 320.0153
VAL 330.0134
PRO 340.0104
ASN 350.0040
ILE 360.0067
THR 370.0080
TYR 380.0062
GLN 390.0079
CYS 400.0043
MET 410.0061
GLU 420.0059
LEU 430.0060
ASN 440.0045
PHE 450.0042
TYR 460.0068
LYS 470.0079
ILE 480.0068
PRO 490.0058
ASP 500.0100
ASN 510.0101
LEU 520.0057
PRO 530.0043
PHE 540.0070
SER 550.0050
THR 560.0040
LYS 570.0080
ASN 580.0083
LEU 590.0059
ASP 600.0063
LEU 610.0040
SER 620.0059
PHE 630.0051
ASN 640.0023
PRO 650.0035
LEU 660.0059
ARG 670.0078
HIS 680.0086
LEU 690.0092
GLY 700.0099
SER 710.0106
TYR 720.0116
SER 730.0093
PHE 740.0092
PHE 750.0108
SER 760.0094
PHE 770.0087
PRO 780.0113
GLU 790.0101
LEU 800.0096
GLN 810.0113
VAL 820.0099
LEU 830.0090
ASP 840.0086
LEU 850.0081
SER 860.0085
ARG 870.0075
CYS 880.0069
GLU 890.0077
ILE 900.0083
GLN 910.0095
THR 920.0094
ILE 930.0098
GLU 940.0101
ASP 950.0106
GLY 960.0107
ALA 970.0104
TYR 980.0107
GLN 990.0119
SER 1000.0115
LEU 1010.0111
SER 1020.0113
HIS 1030.0114
LEU 1040.0105
SER 1050.0107
THR 1060.0099
LEU 1070.0090
ILE 1080.0087
LEU 1090.0085
THR 1100.0083
GLY 1110.0080
ASN 1120.0084
PRO 1130.0090
ILE 1140.0091
GLN 1150.0096
SER 1160.0096
LEU 1170.0089
ALA 1180.0088
LEU 1190.0089
GLY 1200.0093
ALA 1210.0094
PHE 1220.0097
SER 1230.0100
GLY 1240.0099
LEU 1250.0098
SER 1260.0102
SER 1270.0085
LEU 1280.0078
GLN 1290.0079
LYS 1300.0076
LEU 1310.0066
VAL 1320.0060
ALA 1330.0059
VAL 1340.0060
GLU 1350.0061
THR 1360.0061
ASN 1370.0069
LEU 1380.0057
ALA 1390.0052
SER 1400.0046
LEU 1410.0044
GLU 1420.0052
ASN 1430.0055
PHE 1440.0060
PRO 1450.0062
ILE 1460.0067
GLY 1470.0052
HIS 1480.0052
LEU 1490.0059
LYS 1500.0051
THR 1510.0061
LEU 1520.0046
LYS 1530.0052
GLU 1540.0049
LEU 1550.0042
ASN 1560.0043
VAL 1570.0034
ALA 1580.0036
HIS 1590.0040
ASN 1600.0039
LEU 1610.0041
ILE 1620.0036
GLN 1630.0038
SER 1640.0042
PHE 1650.0045
LYS 1660.0054
LEU 1670.0053
PRO 1680.0053
GLU 1690.0063
TYR 1700.0054
PHE 1710.0057
SER 1720.0058
ASN 1730.0052
LEU 1740.0051
THR 1750.0063
ASN 1760.0067
LEU 1770.0043
GLU 1780.0047
HIS 1790.0040
LEU 1800.0031
ASP 1810.0028
LEU 1820.0026
SER 1830.0026
SER 1840.0026
ASN 1850.0025
LYS 1860.0028
ILE 1870.0031
GLN 1880.0030
SER 1890.0036
ILE 1900.0045
TYR 1910.0053
CYS 1920.0069
THR 1930.0075
ASP 1940.0065
LEU 1950.0073
ARG 1960.0087
VAL 1970.0082
LEU 1980.0084
HIS 1990.0099
GLN 2000.0107
MET 2010.0103
PRO 2020.0104
LEU 2030.0110
LEU 2040.0092
ASN 2050.0090
LEU 2060.0069
SER 2070.0056
LEU 2080.0047
ASP 2090.0041
LEU 2100.0033
SER 2110.0030
LEU 2120.0027
ASN 2130.0025
PRO 2140.0022
MET 2150.0023
ASN 2160.0021
PHE 2170.0030
ILE 2180.0036
GLN 2190.0041
PRO 2200.0038
GLY 2210.0050
ALA 2220.0050
PHE 2230.0055
LYS 2240.0059
GLU 2250.0072
ILE 2260.0071
ARG 2270.0063
LEU 2280.0063
HIS 2290.0072
LYS 2300.0064
LEU 2310.0052
THR 2320.0045
LEU 2330.0036
ARG 2340.0038
ASN 2350.0033
ASN 2360.0031
PHE 2370.0030
ASP 2380.0029
SER 2390.0029
LEU 2400.0030
ASN 2410.0030
VAL 2420.0027
MET 2430.0032
LYS 2440.0032
THR 2450.0028
CYS 2460.0033
ILE 2470.0039
GLN 2480.0032
GLY 2490.0037
LEU 2500.0046
ALA 2510.0041
GLY 2520.0044
LEU 2530.0050
GLU 2540.0059
VAL 2550.0064
HIS 2560.0074
ARG 2570.0071
LEU 2580.0061
VAL 2590.0064
LEU 2600.0056
GLY 2610.0057
GLU 2620.0038
PHE 2630.0038
ARG 2640.0038
ASN 2650.0038
GLU 2660.0037
GLY 2670.0043
ASN 2680.0043
LEU 2690.0039
GLU 2700.0037
LYS 2710.0040
PHE 2720.0060
ASP 2730.0062
LYS 2740.0066
SER 2750.0057
ALA 2760.0056
LEU 2770.0063
GLU 2780.0058
GLY 2790.0051
LEU 2800.0061
CYS 2810.0061
ASN 2820.0049
LEU 2830.0054
THR 2840.0059
ILE 2850.0067
GLU 2860.0074
GLU 2870.0083
PHE 2880.0081
ARG 2890.0083
LEU 2900.0081
ALA 2910.0084
TYR 2920.0069
LEU 2930.0067
ASP 2940.0067
TYR 2950.0066
TYR 2960.0069
LEU 2970.0102
ASP 2980.0102
GLY 2990.0100
ILE 3000.0097
ILE 3010.0095
ASP 3020.0087
LEU 3030.0086
PHE 3040.0088
ASN 3050.0087
CYS 3060.0082
LEU 3070.0083
THR 3080.0084
ASN 3090.0084
VAL 3100.0084
SER 3110.0086
SER 3120.0089
PHE 3130.0092
SER 3140.0096
LEU 3150.0100
VAL 3160.0104
SER 3170.0109
VAL 3180.0109
THR 3190.0110
ILE 3200.0108
GLU 3210.0109
ARG 3220.0109
VAL 3230.0104
LYS 3240.0101
ASP 3250.0102
PHE 3260.0098
SER 3270.0088
TYR 3280.0088
ASN 3290.0083
PHE 3300.0084
GLY 3310.0080
TRP 3320.0081
GLN 3330.0075
HIS 3340.0078
LEU 3350.0082
GLU 3360.0086
LEU 3370.0104
VAL 3380.0109
ASN 3390.0116
CYS 3400.0117
LYS 3410.0120
PHE 3420.0115
GLY 3430.0116
GLN 3440.0105
PHE 3450.0097
PRO 3460.0103
THR 3470.0089
LEU 3480.0081
LYS 3490.0076
LEU 3500.0071
LYS 3510.0061
SER 3520.0064
LEU 3530.0061
LYS 3540.0049
ARG 3550.0055
LEU 3560.0064
THR 3570.0079
PHE 3580.0085
THR 3590.0092
SER 3600.0106
ASN 3610.0110
LYS 3620.0104
GLY 3630.0107
GLY 3640.0102
ASN 3650.0087
ALA 3660.0077
PHE 3670.0072
SER 3680.0075
GLU 3690.0063
VAL 3700.0061
ASP 3710.0054
LEU 3720.0058
PRO 3730.0048
SER 3740.0038
LEU 3750.0035
GLU 3760.0023
PHE 3770.0040
LEU 3780.0045
ASP 3790.0059
LEU 3800.0061
SER 3810.0069
ARG 3820.0081
ASN 3830.0082
GLY 3840.0070
LEU 3850.0065
SER 3860.0056
PHE 3870.0041
LYS 3880.0047
GLY 3890.0042
CYS 3900.0027
CYS 3910.0027
SER 3920.0033
GLN 3930.0031
SER 3940.0047
ASP 3950.0042
PHE 3960.0037
GLY 3970.0038
THR 3980.0022
ILE 3990.0022
SER 4000.0017
LEU 4010.0015
LYS 4020.0031
TYR 4030.0036
LEU 4040.0028
ASP 4050.0045
LEU 4060.0041
SER 4070.0047
PHE 4080.0052
ASN 4090.0043
GLY 4100.0036
VAL 4110.0024
ILE 4120.0025
THR 4130.0032
MET 4140.0036
SER 4150.0048
SER 4160.0048
ASN 4170.0048
PHE 4180.0042
LEU 4190.0053
GLY 4200.0048
LEU 4210.0041
GLU 4220.0054
GLN 4230.0050
LEU 4240.0047
GLU 4250.0063
HIS 4260.0059
LEU 4270.0041
ASP 4280.0042
PHE 4290.0033
GLN 4300.0043
HIS 4310.0038
SER 4320.0025
ASN 4330.0019
LEU 4340.0025
LYS 4350.0033
GLN 4360.0046
MET 4370.0047
SER 4380.0055
GLU 4390.0064
PHE 4400.0069
SER 4410.0068
VAL 4420.0055
PHE 4430.0059
LEU 4440.0074
SER 4450.0076
LEU 4460.0072
ARG 4470.0095
ASN 4480.0093
LEU 4490.0078
ILE 4500.0084
TYR 4510.0069
LEU 4520.0055
ASP 4530.0047
ILE 4540.0040
SER 4550.0036
HIS 4560.0028
THR 4570.0028
HIS 4580.0028
THR 4590.0037
ARG 4600.0042
VAL 4610.0048
ALA 4620.0058
PHE 4630.0066
ASN 4640.0064
GLY 4650.0074
ILE 4660.0063
PHE 4670.0066
ASN 4680.0082
GLY 4690.0090
LEU 4700.0082
SER 4710.0095
SER 4720.0098
LEU 4730.0081
GLU 4740.0077
VAL 4750.0064
LEU 4760.0049
LYS 4770.0038
MET 4780.0030
ALA 4790.0019
GLY 4800.0011
ASN 4810.0019
SER 4820.0027
PHE 4830.0042
GLN 4840.0063
GLU 4850.0070
ASN 4860.0052
PHE 4870.0052
LEU 4880.0034
PRO 4890.0048
ASP 4900.0048
ILE 4910.0054
PHE 4920.0050
THR 4930.0063
GLU 4940.0077
LEU 4950.0067
ARG 4960.0070
ASN 4970.0072
LEU 4980.0053
THR 4990.0054
PHE 5000.0043
LEU 5010.0022
ASP 5020.0012
LEU 5030.0007
SER 5040.0017
GLN 5050.0019
CYS 5060.0019
GLN 5070.0035
LEU 5080.0037
GLU 5090.0055
GLN 5100.0054
LEU 5110.0042
SER 5120.0047
PRO 5130.0043
THR 5140.0034
ALA 5150.0027
PHE 5160.0012
ASN 5170.0021
SER 5180.0028
LEU 5190.0022
SER 5200.0024
SER 5210.0037
LEU 5220.0018
GLN 5230.0035
VAL 5240.0035
LEU 5250.0025
ASN 5260.0031
MET 5270.0040
SER 5280.0046
HIS 5290.0049
ASN 5300.0048
ASN 5310.0056
PHE 5320.0052
PHE 5330.0053
SER 5340.0053
LEU 5350.0053
ASP 5360.0052
THR 5370.0053
PHE 5380.0051
PRO 5390.0043
TYR 5400.0045
LYS 5410.0050
CYS 5420.0030
LEU 5430.0031
ASN 5440.0035
SER 5450.0037
LEU 5460.0040
GLN 5470.0049
VAL 5480.0049
LEU 5490.0049
ASP 5500.0051
TYR 5510.0055
SER 5520.0057
LEU 5530.0059
ASN 5540.0058
HIS 5550.0055
ILE 5560.0051
MET 5570.0040
THR 5580.0040
SER 5590.0042
LYS 5600.0047
LYS 5610.0050
GLN 5620.0047
GLU 5630.0054
LEU 5640.0047
GLN 5650.0055
HIS 5660.0061
PHE 5670.0056
PRO 5680.0055
SER 5690.0061
SER 5700.0057
LEU 5710.0056
ALA 5720.0045
PHE 5730.0049
LEU 5740.0049
ASN 5750.0054
LEU 5760.0052
THR 5770.0053
GLN 5780.0051
ASN 5790.0045
ASP 5800.0037
PHE 5810.0026
ALA 5820.0034
CYS 5830.0037
THR 5840.0070
CYS 5850.0087
GLU 5860.0090
HIS 5870.0045
GLN 5880.0038
SER 5890.0027
PHE 5900.0021
LEU 5910.0008
GLN 5920.0008
TRP 5930.0016
ILE 5940.0025
LYS 5950.0032
ASP 5960.0030
GLN 5970.0032
ARG 5980.0034
GLN 5990.0046
LEU 6000.0048
LEU 6010.0041
VAL 6020.0063
GLU 6030.0065
VAL 6040.0048
GLU 6050.0057
ARG 6060.0055
MET 6070.0042
GLU 6080.0027
CYS 6090.0009
ALA 6100.0014
THR 6110.0039
PRO 6120.0066
SER 6130.0062
ASP 6140.0082
LYS 6150.0062
GLN 6160.0032
GLY 6170.0038
MET 6180.0051
PRO 6190.0051
VAL 6200.0029
LEU 6210.0049
SER 6220.0083
LEU 6230.0067
ASN 6240.0098
ILE 6250.0085
THR 6260.0122
CYS 6270.0150
GLU 10.0667
ALA 20.0335
ALA 30.0229
ALA 40.0313
LYS 50.0156
MET 60.0352
GLN 70.0370
ARG 80.0249
LEU 90.0385
VAL 100.0530
LEU 110.0357
LEU 120.0366
LEU 130.0263
ALA 140.0177
ILE 150.0222
SER 160.0360
LEU 170.0457
LEU 180.0338
LEU 190.0132
TYR 200.0607
GLN 210.0716
ASP 220.0432
LEU 230.0281
PRO 240.0534
VAL 250.0898
ARG 260.0274
SER 270.0175
GLU 280.0120
PHE 290.0032
GLU 300.0093
LEU 310.0041
ASP 320.0052
ARG 330.0082
ILE 340.0069
CYS 350.0064
GLY 360.0065
TYR 370.0067
GLY 380.0064
THR 390.0065
ALA 400.0062
ARG 410.0056
CYS 420.0087
ARG 430.0124
LYS 440.0166
LYS 450.0158
CYS 460.0066
ARG 470.0057
SER 480.0036
GLN 490.0029
GLU 500.0032
TYR 510.0045
ARG 520.0069
ILE 530.0071
GLY 540.0101
ARG 550.0124
CYS 560.0113
PRO 570.0134
ASN 580.0155
THR 590.0170
TYR 600.0152
ALA 610.0105
CYS 620.0091
CYS 630.0069
LEU 640.0047
ARG 650.0036
LYS 660.0028
TRP 670.0034
ASP 680.0033
GLU 690.0034
SER 700.0037
LEU 710.0028
LEU 720.0034
ASN 730.0029
ARG 740.0022
THR 750.0026
LYS 760.0027
PRO 770.0028
GLU 780.0029
ALA 790.0028
ALA 800.0029
ALA 810.0061
LYS 820.0044
LYS 830.0044
GLU 840.0044
MET 850.0034
ASN 860.0039
LEU 870.0022
SER 880.0028
VAL 890.0013
GLY 900.0023
LEU 910.0016
GLY 920.0030
GLY 930.0045
GLY 940.0061
SER 950.0047
ASN 960.0043
LEU 970.0036
SER 980.0043
VAL 990.0037
GLY 1000.0047
LEU 1010.0033
GLY 1020.0040
GLU 1030.0031
ILE 1040.0031
GLY 1050.0023
GLY 1060.0026
GLY 1070.0026
SER 1080.0022
LYS 1090.0017
LEU 1100.0022
LEU 1110.0028
ASP 1120.0033
ILE 1130.0020
ASN 1140.0027
LEU 1150.0017
GLY 1160.0082
ARG 1170.0120
GLY 1180.0126
GLY 1190.0095
GLY 1200.0037
SER 1210.0023
MET 1220.0023
VAL 1230.0020
ASP 1240.0020
LEU 1250.0018
THR 1260.0027
PHE 1270.0030
GLY 1280.0036
GLY 1290.0043
VAL 1300.0044
GLY 1310.0042
GLY 1320.0042
GLY 1330.0048
SER 1340.0040
THR 1350.0044
PHE 1360.0033
THR 1370.0030
PHE 1380.0020
PHE 1390.0023
PRO 1400.0018
LEU 1410.0021
VAL 1420.0063
ILE 1430.0094
GLY 1440.0140
GLY 1450.0188
GLY 1460.0171
SER 1470.0125
ASP 1480.0074
ALA 1490.0056
MET 1500.0021
TYR 1510.0010
LEU 1520.0014
GLY 1530.0018
PHE 1540.0025
ALA 1550.0033
ALA 1560.0038
GLY 1570.0047
GLY 1580.0051
GLY 1590.0060
SER 1600.0053
ALA 1610.0060
GLY 1620.0058
GLY 1630.0048
GLU 1640.0038
ASN 1650.0028
HIS 1660.0020
VAL 1670.0020
ALA 1680.0021
PHE 1690.0022
GLY 1700.0024
PRO 1710.0042
GLY 1720.0039
PRO 1730.0032
GLY 1740.0019
VAL 1750.0012
ASP 1760.0024
LEU 1770.0010
THR 1780.0014
PHE 1790.0014
GLY 1800.0014
GLY 1810.0064
VAL 1820.0076
GLN 1830.0073
PHE 1840.0074
ALA 1850.0083
MET 1860.0050
VAL 1870.0046
ASN 1880.0042
ASN 1890.0051
GLY 1900.0061
PRO 1910.0135
GLY 1920.0127
PRO 1930.0079
GLY 1940.0078
GLU 1950.0096
SER 1960.0141
PHE 1970.0098
THR 1980.0068
ALA 1990.0042
GLN 2000.0017
PRO 2010.0028
ALA 2020.0035
ASP 2030.0048
MET 2040.0034
GLN 2050.0021
ALA 2060.0038
GLY 2070.0046
ILE 2080.0047
LYS 2090.0031
GLY 2100.0057
PRO 2110.0024
GLY 2120.0057
PRO 2130.0028
GLY 2140.0056
GLY 2150.0093
SER 2160.0049
ILE 2170.0066
GLN 2180.0073
VAL 2190.0040
ILE 2200.0079
ASN 2210.0085
GLY 2220.0099
SER 2230.0117
THR 2240.0086
ILE 2250.0087
GLY 2260.0127
THR 2270.0122
GLY 2280.0079
SER 2290.0085
LYS 2300.0062
LYS 2310.0056
THR 2320.0075
ILE 2330.0082
LEU 2340.0105
ILE 2350.0125
TYR 2360.0166
SER 2370.0180
ILE 2380.0176
ILE 2390.0150
GLY 2400.0164
VAL 2410.0073
LYS 2420.0062
LYS 2430.0081
GLY 2440.0115
THR 2450.0097
LEU 2460.0132
ALA 2470.0153
TRP 2480.0164
ALA 2490.0199
ARG 2500.0193
THR 2510.0189
GLY 2520.0188
PHE 2530.0122
SER 2540.0131
PRO 2550.0060
ALA 2560.0069
LYS 2570.0047
LYS 2580.0031
LEU 2590.0056
ASN 2600.0103
ALA 2610.0090
GLY 2620.0077
VAL 2630.0093
VAL 2640.0094
ARG 2650.0107
VAL 2660.0086
PHE 2670.0097
PHE 2680.0072
LEU 2690.0130
ASN 2700.0151
GLN 2710.0128
LYS 2720.0112
LYS 2730.0195
ALA 2740.0233
LYS 2750.0234
ASP 2760.0268
VAL 2770.0254
LEU 2780.0254
ARG 2790.0268
LYS 2800.0268
THR 2810.0147
SER 2820.0064
ARG 2830.0126
PRO 2840.0234
MET 2850.0232
VAL 2860.0312
ASP 2870.0154
LEU 2880.0129
THR 2890.0146
PHE 2900.0241
GLY 2910.0228
GLY 2920.0340

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.