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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 70  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0509
GLU 270.0152
PRO 280.0120
CYS 290.0111
VAL 300.0130
GLU 310.0177
VAL 320.0189
VAL 330.0231
PRO 340.0242
ASN 350.0236
ILE 360.0225
THR 370.0184
TYR 380.0141
GLN 390.0100
CYS 400.0067
MET 410.0046
GLU 420.0031
LEU 430.0045
ASN 440.0046
PHE 450.0048
TYR 460.0045
LYS 470.0050
ILE 480.0080
PRO 490.0100
ASP 500.0129
ASN 510.0149
LEU 520.0147
PRO 530.0178
PHE 540.0183
SER 550.0201
THR 560.0176
LYS 570.0177
ASN 580.0149
LEU 590.0115
ASP 600.0089
LEU 610.0062
SER 620.0065
PHE 630.0056
ASN 640.0042
PRO 650.0043
LEU 660.0053
ARG 670.0064
HIS 680.0084
LEU 690.0100
GLY 700.0122
SER 710.0146
TYR 720.0134
SER 730.0106
PHE 740.0123
PHE 750.0145
SER 760.0142
PHE 770.0137
PRO 780.0161
GLU 790.0159
LEU 800.0138
GLN 810.0140
VAL 820.0114
LEU 830.0100
ASP 840.0083
LEU 850.0076
SER 860.0079
ARG 870.0075
CYS 880.0067
GLU 890.0071
ILE 900.0082
GLN 910.0092
THR 920.0108
ILE 930.0115
GLU 940.0135
ASP 950.0154
GLY 960.0148
ALA 970.0119
TYR 980.0121
GLN 990.0144
SER 1000.0142
LEU 1010.0130
SER 1020.0144
HIS 1030.0119
LEU 1040.0099
SER 1050.0095
THR 1060.0079
LEU 1070.0088
ILE 1080.0079
LEU 1090.0082
THR 1100.0085
GLY 1110.0084
ASN 1120.0082
PRO 1130.0088
ILE 1140.0098
GLN 1150.0110
SER 1160.0119
LEU 1170.0127
ALA 1180.0146
LEU 1190.0152
GLY 1200.0141
ALA 1210.0119
PHE 1220.0109
SER 1230.0128
GLY 1240.0118
LEU 1250.0094
SER 1260.0103
SER 1270.0081
LEU 1280.0082
GLN 1290.0091
LYS 1300.0089
LEU 1310.0089
VAL 1320.0084
ALA 1330.0080
VAL 1340.0086
GLU 1350.0079
THR 1360.0071
ASN 1370.0055
LEU 1380.0056
ALA 1390.0059
SER 1400.0066
LEU 1410.0073
GLU 1420.0093
ASN 1430.0086
PHE 1440.0082
PRO 1450.0084
ILE 1460.0091
GLY 1470.0090
HIS 1480.0084
LEU 1490.0084
LYS 1500.0088
THR 1510.0092
LEU 1520.0102
LYS 1530.0117
GLU 1540.0112
LEU 1550.0104
ASN 1560.0099
VAL 1570.0082
ALA 1580.0083
HIS 1590.0071
ASN 1600.0062
LEU 1610.0058
ILE 1620.0053
GLN 1630.0053
SER 1640.0071
PHE 1650.0082
LYS 1660.0097
LEU 1670.0103
PRO 1680.0104
GLU 1690.0120
TYR 1700.0114
PHE 1710.0116
SER 1720.0131
ASN 1730.0126
LEU 1740.0117
THR 1750.0135
ASN 1760.0133
LEU 1770.0124
GLU 1780.0132
HIS 1790.0121
LEU 1800.0109
ASP 1810.0100
LEU 1820.0085
SER 1830.0078
SER 1840.0064
ASN 1850.0060
LYS 1860.0052
ILE 1870.0063
GLN 1880.0056
SER 1890.0070
ILE 1900.0080
TYR 1910.0104
CYS 1920.0103
THR 1930.0124
ASP 1940.0113
LEU 1950.0114
ARG 1960.0137
VAL 1970.0143
LEU 1980.0132
HIS 1990.0148
GLN 2000.0172
MET 2010.0166
PRO 2020.0179
LEU 2030.0182
LEU 2040.0157
ASN 2050.0151
LEU 2060.0123
SER 2070.0109
LEU 2080.0097
ASP 2090.0086
LEU 2100.0076
SER 2110.0069
LEU 2120.0053
ASN 2130.0061
PRO 2140.0059
MET 2150.0064
ASN 2160.0074
PHE 2170.0086
ILE 2180.0081
GLN 2190.0091
PRO 2200.0085
GLY 2210.0091
ALA 2220.0098
PHE 2230.0089
LYS 2240.0095
GLU 2250.0108
ILE 2260.0102
ARG 2270.0107
LEU 2280.0098
HIS 2290.0102
LYS 2300.0085
LEU 2310.0071
THR 2320.0064
LEU 2330.0062
ARG 2340.0059
ASN 2350.0060
ASN 2360.0064
PHE 2370.0085
ASP 2380.0097
SER 2390.0102
LEU 2400.0099
ASN 2410.0119
VAL 2420.0105
MET 2430.0085
LYS 2440.0089
THR 2450.0101
CYS 2460.0090
ILE 2470.0080
GLN 2480.0087
GLY 2490.0093
LEU 2500.0076
ALA 2510.0070
GLY 2520.0074
LEU 2530.0073
GLU 2540.0071
VAL 2550.0068
HIS 2560.0067
ARG 2570.0051
LEU 2580.0050
VAL 2590.0047
LEU 2600.0049
GLY 2610.0046
GLU 2620.0059
PHE 2630.0056
ARG 2640.0044
ASN 2650.0057
GLU 2660.0066
GLY 2670.0081
ASN 2680.0073
LEU 2690.0086
GLU 2700.0096
LYS 2710.0102
PHE 2720.0102
ASP 2730.0114
LYS 2740.0116
SER 2750.0122
ALA 2760.0107
LEU 2770.0089
GLU 2780.0101
GLY 2790.0097
LEU 2800.0076
CYS 2810.0077
ASN 2820.0066
LEU 2830.0060
THR 2840.0052
ILE 2850.0045
GLU 2860.0037
GLU 2870.0027
PHE 2880.0033
ARG 2890.0030
LEU 2900.0039
ALA 2910.0034
TYR 2920.0038
LEU 2930.0056
ASP 2940.0051
TYR 2950.0068
TYR 2960.0064
LEU 2970.0102
ASP 2980.0119
GLY 2990.0121
ILE 3000.0114
ILE 3010.0136
ASP 3020.0129
LEU 3030.0112
PHE 3040.0091
ASN 3050.0104
CYS 3060.0098
LEU 3070.0073
THR 3080.0086
ASN 3090.0076
VAL 3100.0050
SER 3110.0033
SER 3120.0020
PHE 3130.0031
SER 3140.0027
LEU 3150.0037
VAL 3160.0030
SER 3170.0040
VAL 3180.0061
THR 3190.0070
ILE 3200.0091
GLU 3210.0104
ARG 3220.0132
VAL 3230.0119
LYS 3240.0137
ASP 3250.0133
PHE 3260.0115
SER 3270.0127
TYR 3280.0127
ASN 3290.0117
PHE 3300.0097
GLY 3310.0083
TRP 3320.0058
GLN 3330.0051
HIS 3340.0043
LEU 3350.0045
GLU 3360.0039
LEU 3370.0050
VAL 3380.0048
ASN 3390.0052
CYS 3400.0061
LYS 3410.0070
PHE 3420.0101
GLY 3430.0118
GLN 3440.0118
PHE 3450.0106
PRO 3460.0108
THR 3470.0119
LEU 3480.0105
LYS 3490.0112
LEU 3500.0096
LYS 3510.0095
SER 3520.0073
LEU 3530.0066
LYS 3540.0063
ARG 3550.0058
LEU 3560.0057
THR 3570.0051
PHE 3580.0051
THR 3590.0050
SER 3600.0053
ASN 3610.0060
LYS 3620.0077
GLY 3630.0103
GLY 3640.0117
ASN 3650.0099
ALA 3660.0114
PHE 3670.0099
SER 3680.0113
GLU 3690.0115
VAL 3700.0102
ASP 3710.0104
LEU 3720.0089
PRO 3730.0091
SER 3740.0074
LEU 3750.0072
GLU 3760.0072
PHE 3770.0068
LEU 3780.0064
ASP 3790.0057
LEU 3800.0056
SER 3810.0054
ARG 3820.0051
ASN 3830.0057
GLY 3840.0060
LEU 3850.0072
SER 3860.0089
PHE 3870.0087
LYS 3880.0098
GLY 3890.0100
CYS 3900.0090
CYS 3910.0088
SER 3920.0105
GLN 3930.0098
SER 3940.0104
ASP 3950.0099
PHE 3960.0088
GLY 3970.0099
THR 3980.0089
ILE 3990.0100
SER 4000.0086
LEU 4010.0082
LYS 4020.0082
TYR 4030.0073
LEU 4040.0067
ASP 4050.0059
LEU 4060.0057
SER 4070.0051
PHE 4080.0045
ASN 4090.0050
GLY 4100.0060
VAL 4110.0074
ILE 4120.0067
THR 4130.0074
MET 4140.0077
SER 4150.0083
SER 4160.0084
ASN 4170.0084
PHE 4180.0086
LEU 4190.0097
GLY 4200.0101
LEU 4210.0093
GLU 4220.0098
GLN 4230.0094
LEU 4240.0082
GLU 4250.0086
HIS 4260.0074
LEU 4270.0062
ASP 4280.0056
PHE 4290.0054
GLN 4300.0053
HIS 4310.0046
SER 4320.0043
ASN 4330.0047
LEU 4340.0050
LYS 4350.0057
GLN 4360.0064
MET 4370.0045
SER 4380.0046
GLU 4390.0050
PHE 4400.0055
SER 4410.0057
VAL 4420.0061
PHE 4430.0066
LEU 4440.0074
SER 4450.0079
LEU 4460.0077
ARG 4470.0085
ASN 4480.0084
LEU 4490.0072
ILE 4500.0074
TYR 4510.0064
LEU 4520.0049
ASP 4530.0043
ILE 4540.0039
SER 4550.0039
HIS 4560.0033
THR 4570.0038
HIS 4580.0025
THR 4590.0021
ARG 4600.0012
VAL 4610.0012
ALA 4620.0018
PHE 4630.0023
ASN 4640.0028
GLY 4650.0036
ILE 4660.0036
PHE 4670.0038
ASN 4680.0046
GLY 4690.0051
LEU 4700.0049
SER 4710.0057
SER 4720.0058
LEU 4730.0047
GLU 4740.0050
VAL 4750.0041
LEU 4760.0030
LYS 4770.0032
MET 4780.0026
ALA 4790.0027
GLY 4800.0024
ASN 4810.0021
SER 4820.0027
PHE 4830.0026
GLN 4840.0028
GLU 4850.0035
ASN 4860.0036
PHE 4870.0038
LEU 4880.0028
PRO 4890.0023
ASP 4900.0017
ILE 4910.0010
PHE 4920.0008
THR 4930.0009
GLU 4940.0017
LEU 4950.0019
ARG 4960.0024
ASN 4970.0027
LEU 4980.0021
THR 4990.0025
PHE 5000.0019
LEU 5010.0016
ASP 5020.0021
LEU 5030.0028
SER 5040.0029
GLN 5050.0034
CYS 5060.0038
GLN 5070.0048
LEU 5080.0047
GLU 5090.0048
GLN 5100.0048
LEU 5110.0047
SER 5120.0041
PRO 5130.0041
THR 5140.0036
ALA 5150.0033
PHE 5160.0030
ASN 5170.0020
SER 5180.0016
LEU 5190.0010
SER 5200.0010
SER 5210.0007
LEU 5220.0015
GLN 5230.0017
VAL 5240.0022
LEU 5250.0026
ASN 5260.0033
MET 5270.0046
SER 5280.0045
HIS 5290.0050
ASN 5300.0055
ASN 5310.0061
PHE 5320.0071
PHE 5330.0069
SER 5340.0072
LEU 5350.0074
ASP 5360.0081
THR 5370.0058
PHE 5380.0062
PRO 5390.0060
TYR 5400.0054
LYS 5410.0055
CYS 5420.0030
LEU 5430.0028
ASN 5440.0022
SER 5450.0020
LEU 5460.0027
GLN 5470.0039
VAL 5480.0044
LEU 5490.0049
ASP 5500.0054
TYR 5510.0059
SER 5520.0064
LEU 5530.0063
ASN 5540.0068
HIS 5550.0067
ILE 5560.0069
MET 5570.0077
THR 5580.0084
SER 5590.0091
LYS 5600.0098
LYS 5610.0106
GLN 5620.0102
GLU 5630.0091
LEU 5640.0084
GLN 5650.0078
HIS 5660.0071
PHE 5670.0058
PRO 5680.0042
SER 5690.0035
SER 5700.0030
LEU 5710.0045
ALA 5720.0071
PHE 5730.0071
LEU 5740.0072
ASN 5750.0072
LEU 5760.0073
THR 5770.0071
GLN 5780.0064
ASN 5790.0070
ASP 5800.0066
PHE 5810.0071
ALA 5820.0075
CYS 5830.0079
THR 5840.0089
CYS 5850.0108
GLU 5860.0109
HIS 5870.0102
GLN 5880.0113
SER 5890.0128
PHE 5900.0115
LEU 5910.0101
GLN 5920.0107
TRP 5930.0112
ILE 5940.0100
LYS 5950.0104
ASP 5960.0118
GLN 5970.0099
ARG 5980.0085
GLN 5990.0089
LEU 6000.0093
LEU 6010.0081
VAL 6020.0083
GLU 6030.0075
VAL 6040.0075
GLU 6050.0067
ARG 6060.0066
MET 6070.0068
GLU 6080.0061
CYS 6090.0065
ALA 6100.0059
THR 6110.0063
PRO 6120.0069
SER 6130.0052
ASP 6140.0063
LYS 6150.0067
GLN 6160.0052
GLY 6170.0047
MET 6180.0059
PRO 6190.0066
VAL 6200.0080
LEU 6210.0087
SER 6220.0080
LEU 6230.0090
ASN 6240.0116
ILE 6250.0137
THR 6260.0158
CYS 6270.0333
GLU 10.0185
ALA 20.0116
ALA 30.0038
ALA 40.0069
LYS 50.0077
MET 60.0118
GLN 70.0113
ARG 80.0063
LEU 90.0108
VAL 100.0157
LEU 110.0097
LEU 120.0098
LEU 130.0064
ALA 140.0038
ILE 150.0056
SER 160.0107
LEU 170.0159
LEU 180.0129
LEU 190.0012
TYR 200.0165
GLN 210.0219
ASP 220.0152
LEU 230.0041
PRO 240.0138
VAL 250.0255
ARG 260.0073
SER 270.0060
GLU 280.0080
PHE 290.0075
GLU 300.0056
LEU 310.0060
ASP 320.0067
ARG 330.0049
ILE 340.0058
CYS 350.0077
GLY 360.0069
TYR 370.0061
GLY 380.0054
THR 390.0059
ALA 400.0066
ARG 410.0058
CYS 420.0054
ARG 430.0026
LYS 440.0043
LYS 450.0044
CYS 460.0088
ARG 470.0109
SER 480.0134
GLN 490.0137
GLU 500.0116
TYR 510.0134
ARG 520.0108
ILE 530.0149
GLY 540.0145
ARG 550.0135
CYS 560.0132
PRO 570.0176
ASN 580.0159
THR 590.0151
TYR 600.0091
ALA 610.0057
CYS 620.0069
CYS 630.0066
LEU 640.0096
ARG 650.0112
LYS 660.0134
TRP 670.0123
ASP 680.0118
GLU 690.0113
SER 700.0109
LEU 710.0094
LEU 720.0091
ASN 730.0086
ARG 740.0083
THR 750.0082
LYS 760.0079
PRO 770.0075
GLU 780.0062
ALA 790.0057
ALA 800.0072
ALA 810.0036
LYS 820.0030
LYS 830.0036
GLU 840.0048
MET 850.0055
ASN 860.0058
LEU 870.0054
SER 880.0063
VAL 890.0055
GLY 900.0070
LEU 910.0076
GLY 920.0159
GLY 930.0252
GLY 940.0253
SER 950.0172
ASN 960.0085
LEU 970.0064
SER 980.0060
VAL 990.0048
GLY 1000.0051
LEU 1010.0034
GLY 1020.0027
GLU 1030.0017
ILE 1040.0011
GLY 1050.0004
GLY 1060.0026
GLY 1070.0024
SER 1080.0022
LYS 1090.0021
LEU 1100.0020
LEU 1110.0038
ASP 1120.0057
ILE 1130.0051
ASN 1140.0073
LEU 1150.0063
GLY 1160.0150
ARG 1170.0195
GLY 1180.0146
GLY 1190.0081
GLY 1200.0050
SER 1210.0048
MET 1220.0061
VAL 1230.0044
ASP 1240.0054
LEU 1250.0041
THR 1260.0050
PHE 1270.0043
GLY 1280.0049
GLY 1290.0052
VAL 1300.0045
GLY 1310.0113
GLY 1320.0076
GLY 1330.0046
SER 1340.0027
THR 1350.0060
PHE 1360.0073
THR 1370.0084
PHE 1380.0056
PHE 1390.0063
PRO 1400.0040
LEU 1410.0046
VAL 1420.0215
ILE 1430.0261
GLY 1440.0437
GLY 1450.0509
GLY 1460.0384
SER 1470.0292
ASP 1480.0164
ALA 1490.0166
MET 1500.0086
TYR 1510.0063
LEU 1520.0047
GLY 1530.0048
PHE 1540.0069
ALA 1550.0087
ALA 1560.0087
GLY 1570.0097
GLY 1580.0071
GLY 1590.0088
SER 1600.0106
ALA 1610.0124
GLY 1620.0123
GLY 1630.0107
GLU 1640.0087
ASN 1650.0069
HIS 1660.0051
VAL 1670.0058
ALA 1680.0066
PHE 1690.0078
GLY 1700.0089
PRO 1710.0419
GLY 1720.0470
PRO 1730.0471
GLY 1740.0279
VAL 1750.0093
ASP 1760.0036
LEU 1770.0031
THR 1780.0024
PHE 1790.0047
GLY 1800.0036
GLY 1810.0058
VAL 1820.0093
GLN 1830.0099
PHE 1840.0119
ALA 1850.0147
MET 1860.0149
VAL 1870.0195
ASN 1880.0076
ASN 1890.0130
GLY 1900.0177
PRO 1910.0379
GLY 1920.0315
PRO 1930.0125
GLY 1940.0151
GLU 1950.0211
SER 1960.0373
PHE 1970.0260
THR 1980.0191
ALA 1990.0129
GLN 2000.0036
PRO 2010.0072
ALA 2020.0081
ASP 2030.0119
MET 2040.0080
GLN 2050.0036
ALA 2060.0101
GLY 2070.0121
ILE 2080.0130
LYS 2090.0090
GLY 2100.0163
PRO 2110.0068
GLY 2120.0174
PRO 2130.0085
GLY 2140.0182
GLY 2150.0303
SER 2160.0181
ILE 2170.0241
GLN 2180.0249
VAL 2190.0223
ILE 2200.0378
ASN 2210.0250
GLY 2220.0194
SER 2230.0383
THR 2240.0409
ILE 2250.0358
GLY 2260.0317
THR 2270.0246
GLY 2280.0135
SER 2290.0292
LYS 2300.0267
LYS 2310.0192
THR 2320.0192
ILE 2330.0166
LEU 2340.0123
ILE 2350.0156
TYR 2360.0048
SER 2370.0101
ILE 2380.0164
ILE 2390.0253
GLY 2400.0314
VAL 2410.0183
LYS 2420.0180
LYS 2430.0175
GLY 2440.0172
THR 2450.0176
LEU 2460.0176
ALA 2470.0270
TRP 2480.0250
ALA 2490.0331
ARG 2500.0327
THR 2510.0296
GLY 2520.0296
PHE 2530.0130
SER 2540.0135
PRO 2550.0163
ALA 2560.0257
LYS 2570.0284
LYS 2580.0232
LEU 2590.0157
ASN 2600.0119
ALA 2610.0141
GLY 2620.0099
VAL 2630.0090
VAL 2640.0124
ARG 2650.0048
VAL 2660.0049
PHE 2670.0042
PHE 2680.0057
LEU 2690.0053
ASN 2700.0068
GLN 2710.0037
LYS 2720.0052
LYS 2730.0111
ALA 2740.0099
LYS 2750.0143
ASP 2760.0215
VAL 2770.0208
LEU 2780.0212
ARG 2790.0260
LYS 2800.0277
THR 2810.0168
SER 2820.0036
ARG 2830.0079
PRO 2840.0180
MET 2850.0233
VAL 2860.0325
ASP 2870.0204
LEU 2880.0062
THR 2890.0058
PHE 2900.0239
GLY 2910.0162
GLY 2920.0334

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.