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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 71  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0611
GLU 270.0213
PRO 280.0236
CYS 290.0148
VAL 300.0114
GLU 310.0023
VAL 320.0089
VAL 330.0126
PRO 340.0132
ASN 350.0182
ILE 360.0168
THR 370.0107
TYR 380.0039
GLN 390.0114
CYS 400.0130
MET 410.0209
GLU 420.0270
LEU 430.0262
ASN 440.0269
PHE 450.0195
TYR 460.0193
LYS 470.0155
ILE 480.0088
PRO 490.0114
ASP 500.0159
ASN 510.0184
LEU 520.0126
PRO 530.0166
PHE 540.0199
SER 550.0203
THR 560.0129
LYS 570.0158
ASN 580.0129
LEU 590.0076
ASP 600.0112
LEU 610.0115
SER 620.0181
PHE 630.0226
ASN 640.0190
PRO 650.0196
LEU 660.0129
ARG 670.0136
HIS 680.0107
LEU 690.0082
GLY 700.0056
SER 710.0053
TYR 720.0039
SER 730.0027
PHE 740.0039
PHE 750.0083
SER 760.0108
PHE 770.0095
PRO 780.0142
GLU 790.0158
LEU 800.0124
GLN 810.0160
VAL 820.0133
LEU 830.0108
ASP 840.0125
LEU 850.0129
SER 860.0173
ARG 870.0164
CYS 880.0142
GLU 890.0154
ILE 900.0138
GLN 910.0147
THR 920.0137
ILE 930.0124
GLU 940.0114
ASP 950.0119
GLY 960.0107
ALA 970.0086
TYR 980.0094
GLN 990.0102
SER 1000.0098
LEU 1010.0110
SER 1020.0121
HIS 1030.0125
LEU 1040.0115
SER 1050.0138
THR 1060.0128
LEU 1070.0117
ILE 1080.0121
LEU 1090.0127
THR 1100.0139
GLY 1110.0145
ASN 1120.0141
PRO 1130.0151
ILE 1140.0151
GLN 1150.0161
SER 1160.0159
LEU 1170.0157
ALA 1180.0166
LEU 1190.0167
GLY 1200.0154
ALA 1210.0141
PHE 1220.0134
SER 1230.0139
GLY 1240.0129
LEU 1250.0122
SER 1260.0130
SER 1270.0100
LEU 1280.0097
GLN 1290.0093
LYS 1300.0086
LEU 1310.0096
VAL 1320.0083
ALA 1330.0089
VAL 1340.0083
GLU 1350.0087
THR 1360.0096
ASN 1370.0054
LEU 1380.0057
ALA 1390.0069
SER 1400.0071
LEU 1410.0067
GLU 1420.0086
ASN 1430.0103
PHE 1440.0102
PRO 1450.0111
ILE 1460.0102
GLY 1470.0104
HIS 1480.0121
LEU 1490.0107
LYS 1500.0100
THR 1510.0091
LEU 1520.0058
LYS 1530.0049
GLU 1540.0040
LEU 1550.0045
ASN 1560.0040
VAL 1570.0024
ALA 1580.0015
HIS 1590.0026
ASN 1600.0034
LEU 1610.0042
ILE 1620.0052
GLN 1630.0060
SER 1640.0053
PHE 1650.0045
LYS 1660.0041
LEU 1670.0027
PRO 1680.0048
GLU 1690.0053
TYR 1700.0072
PHE 1710.0050
SER 1720.0063
ASN 1730.0082
LEU 1740.0061
THR 1750.0070
ASN 1760.0061
LEU 1770.0029
GLU 1780.0032
HIS 1790.0026
LEU 1800.0018
ASP 1810.0020
LEU 1820.0034
SER 1830.0040
SER 1840.0046
ASN 1850.0049
LYS 1860.0063
ILE 1870.0089
GLN 1880.0104
SER 1890.0108
ILE 1900.0102
TYR 1910.0116
CYS 1920.0105
THR 1930.0084
ASP 1940.0072
LEU 1950.0066
ARG 1960.0060
VAL 1970.0025
LEU 1980.0047
HIS 1990.0071
GLN 2000.0060
MET 2010.0066
PRO 2020.0075
LEU 2030.0068
LEU 2040.0049
ASN 2050.0049
LEU 2060.0045
SER 2070.0061
LEU 2080.0063
ASP 2090.0063
LEU 2100.0066
SER 2110.0063
LEU 2120.0075
ASN 2130.0087
PRO 2140.0100
MET 2150.0104
ASN 2160.0119
PHE 2170.0128
ILE 2180.0123
GLN 2190.0133
PRO 2200.0137
GLY 2210.0134
ALA 2220.0116
PHE 2230.0110
LYS 2240.0119
GLU 2250.0110
ILE 2260.0097
ARG 2270.0088
LEU 2280.0083
HIS 2290.0077
LYS 2300.0078
LEU 2310.0083
THR 2320.0077
LEU 2330.0079
ARG 2340.0075
ASN 2350.0080
ASN 2360.0087
PHE 2370.0091
ASP 2380.0098
SER 2390.0075
LEU 2400.0050
ASN 2410.0067
VAL 2420.0092
MET 2430.0077
LYS 2440.0076
THR 2450.0101
CYS 2460.0106
ILE 2470.0095
GLN 2480.0104
GLY 2490.0114
LEU 2500.0107
ALA 2510.0111
GLY 2520.0109
LEU 2530.0105
GLU 2540.0100
VAL 2550.0092
HIS 2560.0085
ARG 2570.0079
LEU 2580.0071
VAL 2590.0070
LEU 2600.0063
GLY 2610.0067
GLU 2620.0069
PHE 2630.0079
ARG 2640.0085
ASN 2650.0097
GLU 2660.0094
GLY 2670.0127
ASN 2680.0096
LEU 2690.0073
GLU 2700.0083
LYS 2710.0059
PHE 2720.0063
ASP 2730.0067
LYS 2740.0074
SER 2750.0053
ALA 2760.0031
LEU 2770.0034
GLU 2780.0057
GLY 2790.0073
LEU 2800.0068
CYS 2810.0090
ASN 2820.0087
LEU 2830.0092
THR 2840.0097
ILE 2850.0082
GLU 2860.0082
GLU 2870.0062
PHE 2880.0042
ARG 2890.0041
LEU 2900.0046
ALA 2910.0074
TYR 2920.0084
LEU 2930.0083
ASP 2940.0113
TYR 2950.0108
TYR 2960.0122
LEU 2970.0161
ASP 2980.0199
GLY 2990.0177
ILE 3000.0137
ILE 3010.0170
ASP 3020.0134
LEU 3030.0094
PHE 3040.0079
ASN 3050.0117
CYS 3060.0104
LEU 3070.0073
THR 3080.0106
ASN 3090.0117
VAL 3100.0086
SER 3110.0090
SER 3120.0057
PHE 3130.0025
SER 3140.0020
LEU 3150.0050
VAL 3160.0086
SER 3170.0134
VAL 3180.0125
THR 3190.0164
ILE 3200.0169
GLU 3210.0215
ARG 3220.0222
VAL 3230.0182
LYS 3240.0208
ASP 3250.0188
PHE 3260.0148
SER 3270.0186
TYR 3280.0185
ASN 3290.0179
PHE 3300.0141
GLY 3310.0146
TRP 3320.0088
GLN 3330.0086
HIS 3340.0050
LEU 3350.0024
GLU 3360.0015
LEU 3370.0069
VAL 3380.0099
ASN 3390.0141
CYS 3400.0139
LYS 3410.0175
PHE 3420.0175
GLY 3430.0209
GLN 3440.0191
PHE 3450.0154
PRO 3460.0139
THR 3470.0155
LEU 3480.0121
LYS 3490.0142
LEU 3500.0123
LYS 3510.0148
SER 3520.0111
LEU 3530.0075
LYS 3540.0069
ARG 3550.0040
LEU 3560.0009
THR 3570.0031
PHE 3580.0065
THR 3590.0096
SER 3600.0139
ASN 3610.0142
LYS 3620.0167
GLY 3630.0178
GLY 3640.0176
ASN 3650.0157
ALA 3660.0153
PHE 3670.0134
SER 3680.0136
GLU 3690.0118
VAL 3700.0091
ASP 3710.0098
LEU 3720.0072
PRO 3730.0086
SER 3740.0079
LEU 3750.0047
GLU 3760.0044
PHE 3770.0027
LEU 3780.0018
ASP 3790.0049
LEU 3800.0068
SER 3810.0095
ARG 3820.0124
ASN 3830.0125
GLY 3840.0141
LEU 3850.0127
SER 3860.0133
PHE 3870.0109
LYS 3880.0113
GLY 3890.0094
CYS 3900.0076
CYS 3910.0059
SER 3920.0050
GLN 3930.0049
SER 3940.0080
ASP 3950.0075
PHE 3960.0058
GLY 3970.0069
THR 3980.0050
ILE 3990.0044
SER 4000.0048
LEU 4010.0022
LYS 4020.0037
TYR 4030.0047
LEU 4040.0052
ASP 4050.0072
LEU 4060.0083
SER 4070.0103
PHE 4080.0113
ASN 4090.0111
GLY 4100.0118
VAL 4110.0116
ILE 4120.0099
THR 4130.0094
MET 4140.0076
SER 4150.0070
SER 4160.0053
ASN 4170.0047
PHE 4180.0037
LEU 4190.0031
GLY 4200.0033
LEU 4210.0030
GLU 4220.0022
GLN 4230.0031
LEU 4240.0038
GLU 4250.0061
HIS 4260.0071
LEU 4270.0080
ASP 4280.0086
PHE 4290.0089
GLN 4300.0095
HIS 4310.0100
SER 4320.0099
ASN 4330.0102
LEU 4340.0089
LYS 4350.0087
GLN 4360.0078
MET 4370.0070
SER 4380.0067
GLU 4390.0063
PHE 4400.0057
SER 4410.0056
VAL 4420.0062
PHE 4430.0060
LEU 4440.0053
SER 4450.0049
LEU 4460.0055
ARG 4470.0056
ASN 4480.0060
LEU 4490.0067
ILE 4500.0077
TYR 4510.0084
LEU 4520.0082
ASP 4530.0086
ILE 4540.0085
SER 4550.0087
HIS 4560.0091
THR 4570.0093
HIS 4580.0080
THR 4590.0073
ARG 4600.0061
VAL 4610.0057
ALA 4620.0058
PHE 4630.0061
ASN 4640.0054
GLY 4650.0061
ILE 4660.0063
PHE 4670.0064
ASN 4680.0062
GLY 4690.0064
LEU 4700.0065
SER 4710.0062
SER 4720.0067
LEU 4730.0069
GLU 4740.0071
VAL 4750.0075
LEU 4760.0072
LYS 4770.0071
MET 4780.0068
ALA 4790.0065
GLY 4800.0068
ASN 4810.0068
SER 4820.0058
PHE 4830.0054
GLN 4840.0067
GLU 4850.0067
ASN 4860.0051
PHE 4870.0053
LEU 4880.0036
PRO 4890.0037
ASP 4900.0026
ILE 4910.0041
PHE 4920.0041
THR 4930.0036
GLU 4940.0047
LEU 4950.0049
ARG 4960.0046
ASN 4970.0055
LEU 4980.0051
THR 4990.0053
PHE 5000.0052
LEU 5010.0045
ASP 5020.0038
LEU 5030.0033
SER 5040.0032
GLN 5050.0043
CYS 5060.0049
GLN 5070.0058
LEU 5080.0049
GLU 5090.0059
GLN 5100.0054
LEU 5110.0039
SER 5120.0044
PRO 5130.0042
THR 5140.0027
ALA 5150.0022
PHE 5160.0012
ASN 5170.0016
SER 5180.0021
LEU 5190.0026
SER 5200.0041
SER 5210.0051
LEU 5220.0031
GLN 5230.0036
VAL 5240.0026
LEU 5250.0015
ASN 5260.0019
MET 5270.0021
SER 5280.0029
HIS 5290.0045
ASN 5300.0050
ASN 5310.0064
PHE 5320.0069
PHE 5330.0078
SER 5340.0076
LEU 5350.0069
ASP 5360.0072
THR 5370.0065
PHE 5380.0068
PRO 5390.0051
TYR 5400.0045
LYS 5410.0059
CYS 5420.0046
LEU 5430.0038
ASN 5440.0057
SER 5450.0050
LEU 5460.0034
GLN 5470.0034
VAL 5480.0024
LEU 5490.0029
ASP 5500.0031
TYR 5510.0044
SER 5520.0050
LEU 5530.0056
ASN 5540.0060
HIS 5550.0069
ILE 5560.0069
MET 5570.0070
THR 5580.0076
SER 5590.0083
LYS 5600.0094
LYS 5610.0102
GLN 5620.0103
GLU 5630.0090
LEU 5640.0081
GLN 5650.0084
HIS 5660.0075
PHE 5670.0065
PRO 5680.0057
SER 5690.0072
SER 5700.0055
LEU 5710.0046
ALA 5720.0053
PHE 5730.0055
LEU 5740.0058
ASN 5750.0059
LEU 5760.0063
THR 5770.0066
GLN 5780.0063
ASN 5790.0061
ASP 5800.0055
PHE 5810.0052
ALA 5820.0023
CYS 5830.0020
THR 5840.0043
CYS 5850.0062
GLU 5860.0038
HIS 5870.0025
GLN 5880.0052
SER 5890.0075
PHE 5900.0071
LEU 5910.0055
GLN 5920.0060
TRP 5930.0073
ILE 5940.0068
LYS 5950.0075
ASP 5960.0093
GLN 5970.0076
ARG 5980.0068
GLN 5990.0079
LEU 6000.0084
LEU 6010.0074
VAL 6020.0081
GLU 6030.0077
VAL 6040.0068
GLU 6050.0065
ARG 6060.0065
MET 6070.0058
GLU 6080.0038
CYS 6090.0025
ALA 6100.0043
THR 6110.0043
PRO 6120.0062
SER 6130.0093
ASP 6140.0094
LYS 6150.0051
GLN 6160.0058
GLY 6170.0040
MET 6180.0014
PRO 6190.0025
VAL 6200.0031
LEU 6210.0050
SER 6220.0035
LEU 6230.0037
ASN 6240.0110
ILE 6250.0130
THR 6260.0194
CYS 6270.0611
GLU 10.0260
ALA 20.0152
ALA 30.0083
ALA 40.0098
LYS 50.0147
MET 60.0171
GLN 70.0150
ARG 80.0098
LEU 90.0164
VAL 100.0200
LEU 110.0131
LEU 120.0107
LEU 130.0050
ALA 140.0066
ILE 150.0067
SER 160.0137
LEU 170.0233
LEU 180.0180
LEU 190.0038
TYR 200.0254
GLN 210.0288
ASP 220.0167
LEU 230.0074
PRO 240.0174
VAL 250.0351
ARG 260.0071
SER 270.0071
GLU 280.0040
PHE 290.0085
GLU 300.0107
LEU 310.0099
ASP 320.0102
ARG 330.0102
ILE 340.0098
CYS 350.0098
GLY 360.0084
TYR 370.0053
GLY 380.0064
THR 390.0078
ALA 400.0106
ARG 410.0090
CYS 420.0118
ARG 430.0152
LYS 440.0206
LYS 450.0197
CYS 460.0110
ARG 470.0110
SER 480.0112
GLN 490.0101
GLU 500.0096
TYR 510.0103
ARG 520.0132
ILE 530.0137
GLY 540.0188
ARG 550.0222
CYS 560.0201
PRO 570.0246
ASN 580.0247
THR 590.0282
TYR 600.0226
ALA 610.0138
CYS 620.0113
CYS 630.0096
LEU 640.0080
ARG 650.0077
LYS 660.0083
TRP 670.0075
ASP 680.0064
GLU 690.0064
SER 700.0051
LEU 710.0052
LEU 720.0055
ASN 730.0055
ARG 740.0051
THR 750.0051
LYS 760.0037
PRO 770.0032
GLU 780.0040
ALA 790.0038
ALA 800.0032
ALA 810.0052
LYS 820.0042
LYS 830.0042
GLU 840.0047
MET 850.0042
ASN 860.0053
LEU 870.0042
SER 880.0039
VAL 890.0033
GLY 900.0027
LEU 910.0022
GLY 920.0025
GLY 930.0052
GLY 940.0069
SER 950.0063
ASN 960.0054
LEU 970.0055
SER 980.0058
VAL 990.0058
GLY 1000.0064
LEU 1010.0051
GLY 1020.0048
GLU 1030.0037
ILE 1040.0038
GLY 1050.0036
GLY 1060.0071
GLY 1070.0045
SER 1080.0030
LYS 1090.0027
LEU 1100.0043
LEU 1110.0069
ASP 1120.0070
ILE 1130.0050
ASN 1140.0057
LEU 1150.0037
GLY 1160.0041
ARG 1170.0099
GLY 1180.0099
GLY 1190.0097
GLY 1200.0059
SER 1210.0021
MET 1220.0016
VAL 1230.0012
ASP 1240.0007
LEU 1250.0006
THR 1260.0007
PHE 1270.0004
GLY 1280.0004
GLY 1290.0008
VAL 1300.0010
GLY 1310.0054
GLY 1320.0061
GLY 1330.0048
SER 1340.0037
THR 1350.0016
PHE 1360.0042
THR 1370.0046
PHE 1380.0038
PHE 1390.0039
PRO 1400.0037
LEU 1410.0051
VAL 1420.0211
ILE 1430.0260
GLY 1440.0421
GLY 1450.0512
GLY 1460.0365
SER 1470.0261
ASP 1480.0141
ALA 1490.0111
MET 1500.0023
TYR 1510.0010
LEU 1520.0006
GLY 1530.0016
PHE 1540.0029
ALA 1550.0041
ALA 1560.0046
GLY 1570.0024
GLY 1580.0059
GLY 1590.0057
SER 1600.0059
ALA 1610.0035
GLY 1620.0030
GLY 1630.0020
GLU 1640.0013
ASN 1650.0011
HIS 1660.0007
VAL 1670.0007
ALA 1680.0010
PHE 1690.0011
GLY 1700.0014
PRO 1710.0055
GLY 1720.0075
PRO 1730.0080
GLY 1740.0052
VAL 1750.0018
ASP 1760.0017
LEU 1770.0015
THR 1780.0016
PHE 1790.0015
GLY 1800.0017
GLY 1810.0018
VAL 1820.0019
GLN 1830.0018
PHE 1840.0021
ALA 1850.0020
MET 1860.0061
VAL 1870.0071
ASN 1880.0033
ASN 1890.0040
GLY 1900.0035
PRO 1910.0045
GLY 1920.0033
PRO 1930.0045
GLY 1940.0052
GLU 1950.0043
SER 1960.0085
PHE 1970.0044
THR 1980.0045
ALA 1990.0041
GLN 2000.0017
PRO 2010.0020
ALA 2020.0024
ASP 2030.0040
MET 2040.0032
GLN 2050.0013
ALA 2060.0051
GLY 2070.0039
ILE 2080.0025
LYS 2090.0011
GLY 2100.0012
PRO 2110.0012
GLY 2120.0080
PRO 2130.0078
GLY 2140.0091
GLY 2150.0141
SER 2160.0023
ILE 2170.0103
GLN 2180.0049
VAL 2190.0162
ILE 2200.0096
ASN 2210.0327
GLY 2220.0245
SER 2230.0247
THR 2240.0343
ILE 2250.0265
GLY 2260.0152
THR 2270.0077
GLY 2280.0177
SER 2290.0339
LYS 2300.0288
LYS 2310.0239
THR 2320.0210
ILE 2330.0246
LEU 2340.0180
ILE 2350.0266
TYR 2360.0281
SER 2370.0293
ILE 2380.0242
ILE 2390.0148
GLY 2400.0123
VAL 2410.0051
LYS 2420.0055
LYS 2430.0092
GLY 2440.0169
THR 2450.0154
LEU 2460.0212
ALA 2470.0166
TRP 2480.0157
ALA 2490.0188
ARG 2500.0173
THR 2510.0254
GLY 2520.0216
PHE 2530.0176
SER 2540.0146
PRO 2550.0087
ALA 2560.0264
LYS 2570.0312
LYS 2580.0256
LEU 2590.0144
ASN 2600.0179
ALA 2610.0228
GLY 2620.0128
VAL 2630.0137
VAL 2640.0133
ARG 2650.0122
VAL 2660.0151
PHE 2670.0175
PHE 2680.0165
LEU 2690.0214
ASN 2700.0244
GLN 2710.0169
LYS 2720.0092
LYS 2730.0192
ALA 2740.0240
LYS 2750.0185
ASP 2760.0207
VAL 2770.0211
LEU 2780.0192
ARG 2790.0169
LYS 2800.0181
THR 2810.0163
SER 2820.0105
ARG 2830.0101
PRO 2840.0141
MET 2850.0114
VAL 2860.0164
ASP 2870.0108
LEU 2880.0142
THR 2890.0146
PHE 2900.0132
GLY 2910.0191
GLY 2920.0183

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.