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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 72  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0542
GLU 270.0142
PRO 280.0119
CYS 290.0079
VAL 300.0061
GLU 310.0068
VAL 320.0048
VAL 330.0081
PRO 340.0106
ASN 350.0145
ILE 360.0134
THR 370.0096
TYR 380.0071
GLN 390.0040
CYS 400.0044
MET 410.0034
GLU 420.0042
LEU 430.0060
ASN 440.0061
PHE 450.0077
TYR 460.0097
LYS 470.0114
ILE 480.0125
PRO 490.0127
ASP 500.0174
ASN 510.0170
LEU 520.0142
PRO 530.0159
PHE 540.0187
SER 550.0173
THR 560.0142
LYS 570.0143
ASN 580.0114
LEU 590.0095
ASP 600.0070
LEU 610.0060
SER 620.0062
PHE 630.0049
ASN 640.0038
PRO 650.0049
LEU 660.0085
ARG 670.0098
HIS 680.0121
LEU 690.0134
GLY 700.0154
SER 710.0174
TYR 720.0176
SER 730.0142
PHE 740.0151
PHE 750.0180
SER 760.0169
PHE 770.0156
PRO 780.0181
GLU 790.0162
LEU 800.0145
GLN 810.0146
VAL 820.0117
LEU 830.0107
ASP 840.0091
LEU 850.0088
SER 860.0089
ARG 870.0080
CYS 880.0075
GLU 890.0086
ILE 900.0106
GLN 910.0126
THR 920.0141
ILE 930.0146
GLU 940.0162
ASP 950.0180
GLY 960.0172
ALA 970.0148
TYR 980.0148
GLN 990.0172
SER 1000.0165
LEU 1010.0151
SER 1020.0153
HIS 1030.0136
LEU 1040.0121
SER 1050.0125
THR 1060.0110
LEU 1070.0105
ILE 1080.0097
LEU 1090.0101
THR 1100.0102
GLY 1110.0099
ASN 1120.0100
PRO 1130.0116
ILE 1140.0128
GLN 1150.0146
SER 1160.0154
LEU 1170.0150
ALA 1180.0163
LEU 1190.0172
GLY 1200.0162
ALA 1210.0144
PHE 1220.0138
SER 1230.0151
GLY 1240.0138
LEU 1250.0122
SER 1260.0131
SER 1270.0108
LEU 1280.0105
GLN 1290.0107
LYS 1300.0101
LEU 1310.0102
VAL 1320.0090
ALA 1330.0092
VAL 1340.0093
GLU 1350.0092
THR 1360.0090
ASN 1370.0092
LEU 1380.0081
ALA 1390.0076
SER 1400.0067
LEU 1410.0063
GLU 1420.0081
ASN 1430.0089
PHE 1440.0097
PRO 1450.0101
ILE 1460.0103
GLY 1470.0090
HIS 1480.0086
LEU 1490.0092
LYS 1500.0077
THR 1510.0082
LEU 1520.0081
LYS 1530.0083
GLU 1540.0082
LEU 1550.0085
ASN 1560.0085
VAL 1570.0071
ALA 1580.0072
HIS 1590.0071
ASN 1600.0071
LEU 1610.0073
ILE 1620.0049
GLN 1630.0042
SER 1640.0041
PHE 1650.0039
LYS 1660.0045
LEU 1670.0047
PRO 1680.0049
GLU 1690.0048
TYR 1700.0055
PHE 1710.0050
SER 1720.0053
ASN 1730.0059
LEU 1740.0061
THR 1750.0057
ASN 1760.0062
LEU 1770.0062
GLU 1780.0064
HIS 1790.0065
LEU 1800.0067
ASP 1810.0069
LEU 1820.0056
SER 1830.0054
SER 1840.0054
ASN 1850.0055
LYS 1860.0054
ILE 1870.0049
GLN 1880.0045
SER 1890.0055
ILE 1900.0057
TYR 1910.0078
CYS 1920.0052
THR 1930.0059
ASP 1940.0055
LEU 1950.0045
ARG 1960.0049
VAL 1970.0048
LEU 1980.0036
HIS 1990.0040
GLN 2000.0048
MET 2010.0042
PRO 2020.0047
LEU 2030.0047
LEU 2040.0044
ASN 2050.0044
LEU 2060.0042
SER 2070.0045
LEU 2080.0047
ASP 2090.0048
LEU 2100.0049
SER 2110.0049
LEU 2120.0040
ASN 2130.0053
PRO 2140.0057
MET 2150.0060
ASN 2160.0071
PHE 2170.0083
ILE 2180.0080
GLN 2190.0082
PRO 2200.0080
GLY 2210.0079
ALA 2220.0075
PHE 2230.0066
LYS 2240.0064
GLU 2250.0059
ILE 2260.0060
ARG 2270.0059
LEU 2280.0057
HIS 2290.0053
LYS 2300.0052
LEU 2310.0054
THR 2320.0051
LEU 2330.0053
ARG 2340.0054
ASN 2350.0057
ASN 2360.0059
PHE 2370.0089
ASP 2380.0097
SER 2390.0100
LEU 2400.0098
ASN 2410.0119
VAL 2420.0106
MET 2430.0096
LYS 2440.0100
THR 2450.0109
CYS 2460.0102
ILE 2470.0101
GLN 2480.0102
GLY 2490.0104
LEU 2500.0093
ALA 2510.0088
GLY 2520.0084
LEU 2530.0081
GLU 2540.0076
VAL 2550.0073
HIS 2560.0067
ARG 2570.0069
LEU 2580.0071
VAL 2590.0068
LEU 2600.0069
GLY 2610.0065
GLU 2620.0055
PHE 2630.0050
ARG 2640.0037
ASN 2650.0047
GLU 2660.0058
GLY 2670.0083
ASN 2680.0076
LEU 2690.0088
GLU 2700.0094
LYS 2710.0099
PHE 2720.0113
ASP 2730.0125
LYS 2740.0130
SER 2750.0140
ALA 2760.0128
LEU 2770.0121
GLU 2780.0129
GLY 2790.0130
LEU 2800.0118
CYS 2810.0119
ASN 2820.0104
LEU 2830.0099
THR 2840.0093
ILE 2850.0088
GLU 2860.0081
GLU 2870.0077
PHE 2880.0080
ARG 2890.0073
LEU 2900.0076
ALA 2910.0070
TYR 2920.0054
LEU 2930.0068
ASP 2940.0065
TYR 2950.0078
TYR 2960.0072
LEU 2970.0118
ASP 2980.0133
GLY 2990.0135
ILE 3000.0132
ILE 3010.0155
ASP 3020.0154
LEU 3030.0140
PHE 3040.0125
ASN 3050.0139
CYS 3060.0143
LEU 3070.0119
THR 3080.0120
ASN 3090.0113
VAL 3100.0099
SER 3110.0079
SER 3120.0071
PHE 3130.0075
SER 3140.0066
LEU 3150.0068
VAL 3160.0059
SER 3170.0059
VAL 3180.0076
THR 3190.0081
ILE 3200.0096
GLU 3210.0108
ARG 3220.0135
VAL 3230.0120
LYS 3240.0138
ASP 3250.0142
PHE 3260.0119
SER 3270.0138
TYR 3280.0145
ASN 3290.0131
PHE 3300.0119
GLY 3310.0103
TRP 3320.0085
GLN 3330.0064
HIS 3340.0054
LEU 3350.0059
GLU 3360.0051
LEU 3370.0049
VAL 3380.0039
ASN 3390.0042
CYS 3400.0057
LYS 3410.0064
PHE 3420.0083
GLY 3430.0102
GLN 3440.0100
PHE 3450.0084
PRO 3460.0087
THR 3470.0118
LEU 3480.0103
LYS 3490.0114
LEU 3500.0098
LYS 3510.0096
SER 3520.0077
LEU 3530.0063
LYS 3540.0040
ARG 3550.0032
LEU 3560.0039
THR 3570.0023
PHE 3580.0034
THR 3590.0020
SER 3600.0017
ASN 3610.0036
LYS 3620.0040
GLY 3630.0056
GLY 3640.0071
ASN 3650.0066
ALA 3660.0084
PHE 3670.0086
SER 3680.0106
GLU 3690.0111
VAL 3700.0096
ASP 3710.0103
LEU 3720.0081
PRO 3730.0083
SER 3740.0059
LEU 3750.0050
GLU 3760.0040
PHE 3770.0031
LEU 3780.0039
ASP 3790.0031
LEU 3800.0042
SER 3810.0039
ARG 3820.0038
ASN 3830.0042
GLY 3840.0052
LEU 3850.0059
SER 3860.0073
PHE 3870.0077
LYS 3880.0089
GLY 3890.0093
CYS 3900.0084
CYS 3910.0082
SER 3920.0100
GLN 3930.0092
SER 3940.0103
ASP 3950.0095
PHE 3960.0080
GLY 3970.0094
THR 3980.0079
ILE 3990.0085
SER 4000.0065
LEU 4010.0061
LYS 4020.0057
TYR 4030.0052
LEU 4040.0052
ASP 4050.0045
LEU 4060.0049
SER 4070.0049
PHE 4080.0050
ASN 4090.0052
GLY 4100.0057
VAL 4110.0060
ILE 4120.0061
THR 4130.0067
MET 4140.0072
SER 4150.0078
SER 4160.0080
ASN 4170.0080
PHE 4180.0080
LEU 4190.0089
GLY 4200.0090
LEU 4210.0081
GLU 4220.0083
GLN 4230.0074
LEU 4240.0067
GLU 4250.0066
HIS 4260.0057
LEU 4270.0050
ASP 4280.0046
PHE 4290.0045
GLN 4300.0043
HIS 4310.0040
SER 4320.0038
ASN 4330.0041
LEU 4340.0047
LYS 4350.0051
GLN 4360.0058
MET 4370.0046
SER 4380.0046
GLU 4390.0049
PHE 4400.0053
SER 4410.0055
VAL 4420.0061
PHE 4430.0063
LEU 4440.0069
SER 4450.0072
LEU 4460.0069
ARG 4470.0073
ASN 4480.0069
LEU 4490.0060
ILE 4500.0059
TYR 4510.0050
LEU 4520.0041
ASP 4530.0035
ILE 4540.0030
SER 4550.0027
HIS 4560.0021
THR 4570.0031
HIS 4580.0019
THR 4590.0015
ARG 4600.0007
VAL 4610.0007
ALA 4620.0025
PHE 4630.0030
ASN 4640.0033
GLY 4650.0040
ILE 4660.0039
PHE 4670.0039
ASN 4680.0046
GLY 4690.0050
LEU 4700.0047
SER 4710.0053
SER 4720.0051
LEU 4730.0041
GLU 4740.0040
VAL 4750.0031
LEU 4760.0023
LYS 4770.0020
MET 4780.0012
ALA 4790.0013
GLY 4800.0010
ASN 4810.0005
SER 4820.0020
PHE 4830.0016
GLN 4840.0017
GLU 4850.0024
ASN 4860.0026
PHE 4870.0026
LEU 4880.0018
PRO 4890.0012
ASP 4900.0011
ILE 4910.0008
PHE 4920.0011
THR 4930.0016
GLU 4940.0023
LEU 4950.0023
ARG 4960.0029
ASN 4970.0028
LEU 4980.0019
THR 4990.0020
PHE 5000.0012
LEU 5010.0008
ASP 5020.0015
LEU 5030.0019
SER 5040.0024
GLN 5050.0029
CYS 5060.0027
GLN 5070.0045
LEU 5080.0042
GLU 5090.0042
GLN 5100.0039
LEU 5110.0036
SER 5120.0030
PRO 5130.0030
THR 5140.0024
ALA 5150.0022
PHE 5160.0018
ASN 5170.0008
SER 5180.0004
LEU 5190.0004
SER 5200.0009
SER 5210.0011
LEU 5220.0006
GLN 5230.0011
VAL 5240.0018
LEU 5250.0022
ASN 5260.0030
MET 5270.0042
SER 5280.0044
HIS 5290.0051
ASN 5300.0054
ASN 5310.0061
PHE 5320.0075
PHE 5330.0076
SER 5340.0075
LEU 5350.0073
ASP 5360.0077
THR 5370.0053
PHE 5380.0054
PRO 5390.0052
TYR 5400.0044
LYS 5410.0043
CYS 5420.0017
LEU 5430.0016
ASN 5440.0010
SER 5450.0009
LEU 5460.0018
GLN 5470.0031
VAL 5480.0038
LEU 5490.0045
ASP 5500.0052
TYR 5510.0059
SER 5520.0065
LEU 5530.0068
ASN 5540.0073
HIS 5550.0075
ILE 5560.0073
MET 5570.0082
THR 5580.0088
SER 5590.0093
LYS 5600.0104
LYS 5610.0111
GLN 5620.0105
GLU 5630.0088
LEU 5640.0081
GLN 5650.0071
HIS 5660.0059
PHE 5670.0049
PRO 5680.0031
SER 5690.0028
SER 5700.0019
LEU 5710.0036
ALA 5720.0061
PHE 5730.0063
LEU 5740.0067
ASN 5750.0068
LEU 5760.0071
THR 5770.0067
GLN 5780.0066
ASN 5790.0072
ASP 5800.0070
PHE 5810.0071
ALA 5820.0071
CYS 5830.0071
THR 5840.0083
CYS 5850.0105
GLU 5860.0110
HIS 5870.0103
GLN 5880.0112
SER 5890.0131
PHE 5900.0115
LEU 5910.0094
GLN 5920.0100
TRP 5930.0106
ILE 5940.0089
LYS 5950.0090
ASP 5960.0108
GLN 5970.0087
ARG 5980.0071
GLN 5990.0073
LEU 6000.0080
LEU 6010.0069
VAL 6020.0068
GLU 6030.0059
VAL 6040.0059
GLU 6050.0050
ARG 6060.0052
MET 6070.0057
GLU 6080.0049
CYS 6090.0054
ALA 6100.0054
THR 6110.0060
PRO 6120.0058
SER 6130.0038
ASP 6140.0048
LYS 6150.0051
GLN 6160.0037
GLY 6170.0030
MET 6180.0040
PRO 6190.0045
VAL 6200.0064
LEU 6210.0069
SER 6220.0060
LEU 6230.0079
ASN 6240.0115
ILE 6250.0138
THR 6260.0170
CYS 6270.0464
GLU 10.0017
ALA 20.0034
ALA 30.0038
ALA 40.0023
LYS 50.0014
MET 60.0019
GLN 70.0026
ARG 80.0022
LEU 90.0013
VAL 100.0024
LEU 110.0021
LEU 120.0022
LEU 130.0017
ALA 140.0015
ILE 150.0018
SER 160.0018
LEU 170.0027
LEU 180.0034
LEU 190.0028
TYR 200.0010
GLN 210.0038
ASP 220.0056
LEU 230.0038
PRO 240.0035
VAL 250.0019
ARG 260.0032
SER 270.0039
GLU 280.0048
PHE 290.0062
GLU 300.0061
LEU 310.0054
ASP 320.0064
ARG 330.0075
ILE 340.0074
CYS 350.0083
GLY 360.0064
TYR 370.0040
GLY 380.0057
THR 390.0075
ALA 400.0090
ARG 410.0083
CYS 420.0081
ARG 430.0073
LYS 440.0073
LYS 450.0076
CYS 460.0076
ARG 470.0077
SER 480.0086
GLN 490.0094
GLU 500.0090
TYR 510.0104
ARG 520.0101
ILE 530.0132
GLY 540.0134
ARG 550.0129
CYS 560.0116
PRO 570.0126
ASN 580.0108
THR 590.0116
TYR 600.0091
ALA 610.0084
CYS 620.0095
CYS 630.0088
LEU 640.0104
ARG 650.0103
LYS 660.0098
TRP 670.0094
ASP 680.0095
GLU 690.0096
SER 700.0094
LEU 710.0074
LEU 720.0075
ASN 730.0079
ARG 740.0073
THR 750.0067
LYS 760.0061
PRO 770.0044
GLU 780.0027
ALA 790.0034
ALA 800.0045
ALA 810.0186
LYS 820.0201
LYS 830.0151
GLU 840.0178
MET 850.0139
ASN 860.0130
LEU 870.0114
SER 880.0096
VAL 890.0084
GLY 900.0064
LEU 910.0074
GLY 920.0090
GLY 930.0113
GLY 940.0123
SER 950.0084
ASN 960.0079
LEU 970.0084
SER 980.0111
VAL 990.0126
GLY 1000.0151
LEU 1010.0154
GLY 1020.0172
GLU 1030.0211
ILE 1040.0217
GLY 1050.0259
GLY 1060.0213
GLY 1070.0185
SER 1080.0182
LYS 1090.0150
LEU 1100.0150
LEU 1110.0165
ASP 1120.0155
ILE 1130.0126
ASN 1140.0126
LEU 1150.0105
GLY 1160.0144
ARG 1170.0148
GLY 1180.0106
GLY 1190.0084
GLY 1200.0043
SER 1210.0103
MET 1220.0098
VAL 1230.0052
ASP 1240.0062
LEU 1250.0052
THR 1260.0082
PHE 1270.0112
GLY 1280.0143
GLY 1290.0170
VAL 1300.0197
GLY 1310.0230
GLY 1320.0198
GLY 1330.0129
SER 1340.0139
THR 1350.0093
PHE 1360.0115
THR 1370.0127
PHE 1380.0107
PHE 1390.0130
PRO 1400.0108
LEU 1410.0100
VAL 1420.0152
ILE 1430.0151
GLY 1440.0226
GLY 1450.0270
GLY 1460.0107
SER 1470.0075
ASP 1480.0044
ALA 1490.0041
MET 1500.0049
TYR 1510.0058
LEU 1520.0079
GLY 1530.0114
PHE 1540.0140
ALA 1550.0177
ALA 1560.0207
GLY 1570.0148
GLY 1580.0075
GLY 1590.0045
SER 1600.0045
ALA 1610.0067
GLY 1620.0098
GLY 1630.0102
GLU 1640.0109
ASN 1650.0074
HIS 1660.0065
VAL 1670.0043
ALA 1680.0065
PHE 1690.0095
GLY 1700.0141
PRO 1710.0498
GLY 1720.0542
PRO 1730.0542
GLY 1740.0324
VAL 1750.0147
ASP 1760.0077
LEU 1770.0060
THR 1780.0041
PHE 1790.0064
GLY 1800.0084
GLY 1810.0064
VAL 1820.0071
GLN 1830.0044
PHE 1840.0067
ALA 1850.0060
MET 1860.0146
VAL 1870.0122
ASN 1880.0077
ASN 1890.0213
GLY 1900.0142
PRO 1910.0470
GLY 1920.0314
PRO 1930.0120
GLY 1940.0104
GLU 1950.0201
SER 1960.0348
PHE 1970.0270
THR 1980.0161
ALA 1990.0078
GLN 2000.0084
PRO 2010.0073
ALA 2020.0100
ASP 2030.0122
MET 2040.0111
GLN 2050.0115
ALA 2060.0161
GLY 2070.0113
ILE 2080.0098
LYS 2090.0046
GLY 2100.0038
PRO 2110.0045
GLY 2120.0121
PRO 2130.0100
GLY 2140.0236
GLY 2150.0282
SER 2160.0281
ILE 2170.0252
GLN 2180.0309
VAL 2190.0288
ILE 2200.0471
ASN 2210.0378
GLY 2220.0291
SER 2230.0369
THR 2240.0296
ILE 2250.0226
GLY 2260.0248
THR 2270.0169
GLY 2280.0048
SER 2290.0159
LYS 2300.0198
LYS 2310.0113
THR 2320.0149
ILE 2330.0138
LEU 2340.0184
ILE 2350.0202
TYR 2360.0229
SER 2370.0287
ILE 2380.0243
ILE 2390.0246
GLY 2400.0217
VAL 2410.0144
LYS 2420.0079
LYS 2430.0144
GLY 2440.0184
THR 2450.0120
LEU 2460.0134
ALA 2470.0221
TRP 2480.0238
ALA 2490.0345
ARG 2500.0356
THR 2510.0490
GLY 2520.0448
PHE 2530.0288
SER 2540.0273
PRO 2550.0201
ALA 2560.0195
LYS 2570.0259
LYS 2580.0227
LEU 2590.0146
ASN 2600.0126
ALA 2610.0066
GLY 2620.0039
VAL 2630.0048
VAL 2640.0053
ARG 2650.0049
VAL 2660.0084
PHE 2670.0104
PHE 2680.0118
LEU 2690.0226
ASN 2700.0302
GLN 2710.0216
LYS 2720.0170
LYS 2730.0220
ALA 2740.0195
LYS 2750.0115
ASP 2760.0210
VAL 2770.0216
LEU 2780.0123
ARG 2790.0185
LYS 2800.0272
THR 2810.0254
SER 2820.0173
ARG 2830.0132
PRO 2840.0116
MET 2850.0223
VAL 2860.0283
ASP 2870.0236
LEU 2880.0058
THR 2890.0053
PHE 2900.0193
GLY 2910.0139
GLY 2920.0318

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.