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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 73  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0727
GLU 270.0090
PRO 280.0092
CYS 290.0081
VAL 300.0110
GLU 310.0120
VAL 320.0140
VAL 330.0137
PRO 340.0122
ASN 350.0083
ILE 360.0092
THR 370.0093
TYR 380.0074
GLN 390.0074
CYS 400.0044
MET 410.0050
GLU 420.0039
LEU 430.0031
ASN 440.0013
PHE 450.0005
TYR 460.0016
LYS 470.0024
ILE 480.0016
PRO 490.0011
ASP 500.0025
ASN 510.0044
LEU 520.0035
PRO 530.0032
PHE 540.0012
SER 550.0039
THR 560.0048
LYS 570.0065
ASN 580.0069
LEU 590.0052
ASP 600.0054
LEU 610.0036
SER 620.0045
PHE 630.0040
ASN 640.0028
PRO 650.0028
LEU 660.0032
ARG 670.0041
HIS 680.0042
LEU 690.0043
GLY 700.0045
SER 710.0046
TYR 720.0045
SER 730.0040
PHE 740.0039
PHE 750.0040
SER 760.0034
PHE 770.0038
PRO 780.0050
GLU 790.0053
LEU 800.0052
GLN 810.0063
VAL 820.0057
LEU 830.0052
ASP 840.0050
LEU 850.0047
SER 860.0047
ARG 870.0045
CYS 880.0044
GLU 890.0045
ILE 900.0043
GLN 910.0044
THR 920.0040
ILE 930.0040
GLU 940.0041
ASP 950.0038
GLY 960.0042
ALA 970.0045
TYR 980.0047
GLN 990.0051
SER 1000.0052
LEU 1010.0052
SER 1020.0055
HIS 1030.0056
LEU 1040.0050
SER 1050.0044
THR 1060.0042
LEU 1070.0038
ILE 1080.0037
LEU 1090.0034
THR 1100.0031
GLY 1110.0030
ASN 1120.0036
PRO 1130.0035
ILE 1140.0032
GLN 1150.0033
SER 1160.0033
LEU 1170.0026
ALA 1180.0029
LEU 1190.0019
GLY 1200.0027
ALA 1210.0031
PHE 1220.0029
SER 1230.0032
GLY 1240.0038
LEU 1250.0036
SER 1260.0035
SER 1270.0027
LEU 1280.0021
GLN 1290.0031
LYS 1300.0033
LEU 1310.0018
VAL 1320.0023
ALA 1330.0015
VAL 1340.0020
GLU 1350.0014
THR 1360.0008
ASN 1370.0009
LEU 1380.0013
ALA 1390.0019
SER 1400.0030
LEU 1410.0036
GLU 1420.0034
ASN 1430.0023
PHE 1440.0019
PRO 1450.0017
ILE 1460.0026
GLY 1470.0024
HIS 1480.0021
LEU 1490.0022
LYS 1500.0032
THR 1510.0036
LEU 1520.0038
LYS 1530.0051
GLU 1540.0048
LEU 1550.0039
ASN 1560.0038
VAL 1570.0035
ALA 1580.0031
HIS 1590.0024
ASN 1600.0022
LEU 1610.0020
ILE 1620.0035
GLN 1630.0035
SER 1640.0042
PHE 1650.0046
LYS 1660.0053
LEU 1670.0053
PRO 1680.0053
GLU 1690.0061
TYR 1700.0057
PHE 1710.0059
SER 1720.0065
ASN 1730.0059
LEU 1740.0056
THR 1750.0066
ASN 1760.0066
LEU 1770.0057
GLU 1780.0061
HIS 1790.0055
LEU 1800.0049
ASP 1810.0045
LEU 1820.0043
SER 1830.0038
SER 1840.0031
ASN 1850.0032
LYS 1860.0030
ILE 1870.0042
GLN 1880.0036
SER 1890.0037
ILE 1900.0040
TYR 1910.0045
CYS 1920.0047
THR 1930.0056
ASP 1940.0054
LEU 1950.0054
ARG 1960.0063
VAL 1970.0068
LEU 1980.0064
HIS 1990.0068
GLN 2000.0079
MET 2010.0078
PRO 2020.0080
LEU 2030.0083
LEU 2040.0074
ASN 2050.0071
LEU 2060.0060
SER 2070.0050
LEU 2080.0047
ASP 2090.0043
LEU 2100.0040
SER 2110.0036
LEU 2120.0035
ASN 2130.0036
PRO 2140.0034
MET 2150.0032
ASN 2160.0031
PHE 2170.0034
ILE 2180.0032
GLN 2190.0036
PRO 2200.0030
GLY 2210.0029
ALA 2220.0033
PHE 2230.0029
LYS 2240.0026
GLU 2250.0030
ILE 2260.0034
ARG 2270.0033
LEU 2280.0033
HIS 2290.0036
LYS 2300.0032
LEU 2310.0027
THR 2320.0026
LEU 2330.0025
ARG 2340.0025
ASN 2350.0026
ASN 2360.0027
PHE 2370.0028
ASP 2380.0031
SER 2390.0025
LEU 2400.0021
ASN 2410.0029
VAL 2420.0030
MET 2430.0022
LYS 2440.0024
THR 2450.0031
CYS 2460.0027
ILE 2470.0022
GLN 2480.0028
GLY 2490.0029
LEU 2500.0022
ALA 2510.0022
GLY 2520.0021
LEU 2530.0018
GLU 2540.0015
VAL 2550.0015
HIS 2560.0016
ARG 2570.0016
LEU 2580.0013
VAL 2590.0017
LEU 2600.0014
GLY 2610.0018
GLU 2620.0026
PHE 2630.0035
ARG 2640.0040
ASN 2650.0045
GLU 2660.0039
GLY 2670.0035
ASN 2680.0028
LEU 2690.0021
GLU 2700.0020
LYS 2710.0017
PHE 2720.0022
ASP 2730.0024
LYS 2740.0029
SER 2750.0028
ALA 2760.0023
LEU 2770.0024
GLU 2780.0031
GLY 2790.0028
LEU 2800.0025
CYS 2810.0034
ASN 2820.0028
LEU 2830.0024
THR 2840.0024
ILE 2850.0021
GLU 2860.0024
GLU 2870.0026
PHE 2880.0026
ARG 2890.0026
LEU 2900.0026
ALA 2910.0027
TYR 2920.0029
LEU 2930.0028
ASP 2940.0031
TYR 2950.0029
TYR 2960.0031
LEU 2970.0031
ASP 2980.0032
GLY 2990.0032
ILE 3000.0032
ILE 3010.0033
ASP 3020.0035
LEU 3030.0032
PHE 3040.0035
ASN 3050.0039
CYS 3060.0038
LEU 3070.0036
THR 3080.0042
ASN 3090.0045
VAL 3100.0041
SER 3110.0044
SER 3120.0040
PHE 3130.0037
SER 3140.0035
LEU 3150.0033
VAL 3160.0032
SER 3170.0029
VAL 3180.0029
THR 3190.0029
ILE 3200.0030
GLU 3210.0032
ARG 3220.0030
VAL 3230.0030
LYS 3240.0031
ASP 3250.0030
PHE 3260.0032
SER 3270.0032
TYR 3280.0033
ASN 3290.0036
PHE 3300.0039
GLY 3310.0044
TRP 3320.0041
GLN 3330.0044
HIS 3340.0042
LEU 3350.0038
GLU 3360.0037
LEU 3370.0030
VAL 3380.0032
ASN 3390.0028
CYS 3400.0023
LYS 3410.0019
PHE 3420.0023
GLY 3430.0028
GLN 3440.0033
PHE 3450.0036
PRO 3460.0034
THR 3470.0030
LEU 3480.0033
LYS 3490.0031
LEU 3500.0036
LYS 3510.0035
SER 3520.0033
LEU 3530.0034
LYS 3540.0038
ARG 3550.0040
LEU 3560.0037
THR 3570.0037
PHE 3580.0031
THR 3590.0040
SER 3600.0042
ASN 3610.0031
LYS 3620.0021
GLY 3630.0021
GLY 3640.0031
ASN 3650.0041
ALA 3660.0054
PHE 3670.0051
SER 3680.0041
GLU 3690.0035
VAL 3700.0034
ASP 3710.0029
LEU 3720.0030
PRO 3730.0027
SER 3740.0029
LEU 3750.0032
GLU 3760.0033
PHE 3770.0033
LEU 3780.0034
ASP 3790.0043
LEU 3800.0044
SER 3810.0055
ARG 3820.0064
ASN 3830.0061
GLY 3840.0062
LEU 3850.0062
SER 3860.0063
PHE 3870.0066
LYS 3880.0067
GLY 3890.0061
CYS 3900.0055
CYS 3910.0046
SER 3920.0035
GLN 3930.0024
SER 3940.0029
ASP 3950.0038
PHE 3960.0033
GLY 3970.0023
THR 3980.0021
ILE 3990.0016
SER 4000.0018
LEU 4010.0024
LYS 4020.0022
TYR 4030.0033
LEU 4040.0040
ASP 4050.0051
LEU 4060.0057
SER 4070.0069
PHE 4080.0078
ASN 4090.0081
GLY 4100.0086
VAL 4110.0083
ILE 4120.0083
THR 4130.0085
MET 4140.0072
SER 4150.0077
SER 4160.0063
ASN 4170.0057
PHE 4180.0040
LEU 4190.0040
GLY 4200.0024
LEU 4210.0019
GLU 4220.0021
GLN 4230.0007
LEU 4240.0013
GLU 4250.0013
HIS 4260.0027
LEU 4270.0040
ASP 4280.0049
PHE 4290.0057
GLN 4300.0061
HIS 4310.0072
SER 4320.0086
ASN 4330.0094
LEU 4340.0082
LYS 4350.0094
GLN 4360.0095
MET 4370.0088
SER 4380.0099
GLU 4390.0111
PHE 4400.0099
SER 4410.0081
VAL 4420.0069
PHE 4430.0051
LEU 4440.0060
SER 4450.0050
LEU 4460.0033
ARG 4470.0041
ASN 4480.0026
LEU 4490.0011
ILE 4500.0012
TYR 4510.0015
LEU 4520.0027
ASP 4530.0041
ILE 4540.0050
SER 4550.0055
HIS 4560.0070
THR 4570.0077
HIS 4580.0090
THR 4590.0079
ARG 4600.0087
VAL 4610.0078
ALA 4620.0104
PHE 4630.0101
ASN 4640.0093
GLY 4650.0089
ILE 4660.0076
PHE 4670.0058
ASN 4680.0070
GLY 4690.0063
LEU 4700.0044
SER 4710.0053
SER 4720.0040
LEU 4730.0022
GLU 4740.0022
VAL 4750.0012
LEU 4760.0013
LYS 4770.0028
MET 4780.0037
ALA 4790.0045
GLY 4800.0060
ASN 4810.0059
SER 4820.0070
PHE 4830.0069
GLN 4840.0090
GLU 4850.0086
ASN 4860.0063
PHE 4870.0057
LEU 4880.0048
PRO 4890.0058
ASP 4900.0058
ILE 4910.0055
PHE 4920.0048
THR 4930.0063
GLU 4940.0065
LEU 4950.0047
ARG 4960.0055
ASN 4970.0045
LEU 4980.0027
THR 4990.0030
PHE 5000.0018
LEU 5010.0006
ASP 5020.0021
LEU 5030.0022
SER 5040.0031
GLN 5050.0041
CYS 5060.0037
GLN 5070.0048
LEU 5080.0035
GLU 5090.0032
GLN 5100.0029
LEU 5110.0026
SER 5120.0041
PRO 5130.0033
THR 5140.0042
ALA 5150.0036
PHE 5160.0029
ASN 5170.0041
SER 5180.0049
LEU 5190.0036
SER 5200.0046
SER 5210.0044
LEU 5220.0024
GLN 5230.0029
VAL 5240.0022
LEU 5250.0013
ASN 5260.0019
MET 5270.0016
SER 5280.0025
HIS 5290.0030
ASN 5300.0025
ASN 5310.0026
PHE 5320.0024
PHE 5330.0029
SER 5340.0029
LEU 5350.0026
ASP 5360.0026
THR 5370.0020
PHE 5380.0013
PRO 5390.0003
TYR 5400.0012
LYS 5410.0020
CYS 5420.0026
LEU 5430.0023
ASN 5440.0034
SER 5450.0032
LEU 5460.0024
GLN 5470.0024
VAL 5480.0021
LEU 5490.0019
ASP 5500.0020
TYR 5510.0022
SER 5520.0019
LEU 5530.0021
ASN 5540.0023
HIS 5550.0028
ILE 5560.0030
MET 5570.0037
THR 5580.0040
SER 5590.0043
LYS 5600.0054
LYS 5610.0059
GLN 5620.0055
GLU 5630.0043
LEU 5640.0042
GLN 5650.0047
HIS 5660.0035
PHE 5670.0022
PRO 5680.0024
SER 5690.0033
SER 5700.0029
LEU 5710.0025
ALA 5720.0018
PHE 5730.0016
LEU 5740.0017
ASN 5750.0016
LEU 5760.0018
THR 5770.0008
GLN 5780.0018
ASN 5790.0025
ASP 5800.0035
PHE 5810.0032
ALA 5820.0048
CYS 5830.0032
THR 5840.0036
CYS 5850.0024
GLU 5860.0051
HIS 5870.0038
GLN 5880.0028
SER 5890.0046
PHE 5900.0037
LEU 5910.0017
GLN 5920.0034
TRP 5930.0038
ILE 5940.0022
LYS 5950.0039
ASP 5960.0052
GLN 5970.0038
ARG 5980.0034
GLN 5990.0038
LEU 6000.0026
LEU 6010.0019
VAL 6020.0016
GLU 6030.0019
VAL 6040.0021
GLU 6050.0030
ARG 6060.0026
MET 6070.0023
GLU 6080.0044
CYS 6090.0050
ALA 6100.0071
THR 6110.0080
PRO 6120.0095
SER 6130.0129
ASP 6140.0126
LYS 6150.0094
GLN 6160.0103
GLY 6170.0090
MET 6180.0075
PRO 6190.0057
VAL 6200.0031
LEU 6210.0043
SER 6220.0067
LEU 6230.0053
ASN 6240.0061
ILE 6250.0045
THR 6260.0053
CYS 6270.0122
GLU 10.0070
ALA 20.0040
ALA 30.0029
ALA 40.0037
LYS 50.0010
MET 60.0032
GLN 70.0038
ARG 80.0035
LEU 90.0041
VAL 100.0053
LEU 110.0038
LEU 120.0042
LEU 130.0030
ALA 140.0018
ILE 150.0025
SER 160.0033
LEU 170.0042
LEU 180.0033
LEU 190.0011
TYR 200.0054
GLN 210.0070
ASP 220.0050
LEU 230.0032
PRO 240.0054
VAL 250.0074
ARG 260.0078
SER 270.0067
GLU 280.0094
PHE 290.0099
GLU 300.0071
LEU 310.0069
ASP 320.0069
ARG 330.0064
ILE 340.0061
CYS 350.0060
GLY 360.0052
TYR 370.0042
GLY 380.0044
THR 390.0051
ALA 400.0059
ARG 410.0022
CYS 420.0020
ARG 430.0016
LYS 440.0036
LYS 450.0061
CYS 460.0062
ARG 470.0066
SER 480.0077
GLN 490.0061
GLU 500.0052
TYR 510.0073
ARG 520.0079
ILE 530.0088
GLY 540.0099
ARG 550.0092
CYS 560.0073
PRO 570.0090
ASN 580.0058
THR 590.0066
TYR 600.0042
ALA 610.0047
CYS 620.0043
CYS 630.0032
LEU 640.0031
ARG 650.0030
LYS 660.0047
TRP 670.0045
ASP 680.0045
GLU 690.0044
SER 700.0044
LEU 710.0037
LEU 720.0036
ASN 730.0036
ARG 740.0031
THR 750.0032
LYS 760.0067
PRO 770.0136
GLU 780.0134
ALA 790.0234
ALA 800.0266
ALA 810.0457
LYS 820.0393
LYS 830.0327
GLU 840.0246
MET 850.0186
ASN 860.0097
LEU 870.0073
SER 880.0067
VAL 890.0091
GLY 900.0111
LEU 910.0166
GLY 920.0307
GLY 930.0419
GLY 940.0373
SER 950.0253
ASN 960.0065
LEU 970.0065
SER 980.0028
VAL 990.0043
GLY 1000.0115
LEU 1010.0138
GLY 1020.0248
GLU 1030.0258
ILE 1040.0157
GLY 1050.0177
GLY 1060.0312
GLY 1070.0324
SER 1080.0367
LYS 1090.0290
LEU 1100.0336
LEU 1110.0319
ASP 1120.0335
ILE 1130.0267
ASN 1140.0313
LEU 1150.0261
GLY 1160.0303
ARG 1170.0285
GLY 1180.0234
GLY 1190.0151
GLY 1200.0071
SER 1210.0065
MET 1220.0064
VAL 1230.0066
ASP 1240.0066
LEU 1250.0069
THR 1260.0045
PHE 1270.0055
GLY 1280.0115
GLY 1290.0170
VAL 1300.0193
GLY 1310.0172
GLY 1320.0115
GLY 1330.0079
SER 1340.0023
THR 1350.0071
PHE 1360.0080
THR 1370.0078
PHE 1380.0069
PHE 1390.0070
PRO 1400.0067
LEU 1410.0118
VAL 1420.0139
ILE 1430.0163
GLY 1440.0194
GLY 1450.0208
GLY 1460.0239
SER 1470.0217
ASP 1480.0174
ALA 1490.0196
MET 1500.0179
TYR 1510.0106
LEU 1520.0096
GLY 1530.0094
PHE 1540.0091
ALA 1550.0097
ALA 1560.0095
GLY 1570.0099
GLY 1580.0069
GLY 1590.0108
SER 1600.0137
ALA 1610.0093
GLY 1620.0093
GLY 1630.0092
GLU 1640.0053
ASN 1650.0044
HIS 1660.0038
VAL 1670.0043
ALA 1680.0046
PHE 1690.0050
GLY 1700.0059
PRO 1710.0056
GLY 1720.0082
PRO 1730.0101
GLY 1740.0069
VAL 1750.0042
ASP 1760.0045
LEU 1770.0046
THR 1780.0047
PHE 1790.0048
GLY 1800.0049
GLY 1810.0086
VAL 1820.0075
GLN 1830.0070
PHE 1840.0059
ALA 1850.0061
MET 1860.0125
VAL 1870.0161
ASN 1880.0166
ASN 1890.0189
GLY 1900.0228
PRO 1910.0268
GLY 1920.0177
PRO 1930.0088
GLY 1940.0137
GLU 1950.0224
SER 1960.0159
PHE 1970.0189
THR 1980.0129
ALA 1990.0163
GLN 2000.0149
PRO 2010.0106
ALA 2020.0130
ASP 2030.0076
MET 2040.0205
GLN 2050.0276
ALA 2060.0238
GLY 2070.0230
ILE 2080.0112
LYS 2090.0120
GLY 2100.0240
PRO 2110.0211
GLY 2120.0453
PRO 2130.0227
GLY 2140.0440
GLY 2150.0727
SER 2160.0206
ILE 2170.0491
GLN 2180.0234
VAL 2190.0415
ILE 2200.0284
ASN 2210.0437
GLY 2220.0380
SER 2230.0282
THR 2240.0310
ILE 2250.0241
GLY 2260.0255
THR 2270.0223
GLY 2280.0202
SER 2290.0153
LYS 2300.0170
LYS 2310.0159
THR 2320.0166
ILE 2330.0153
LEU 2340.0169
ILE 2350.0218
TYR 2360.0204
SER 2370.0206
ILE 2380.0233
ILE 2390.0262
GLY 2400.0309
VAL 2410.0128
LYS 2420.0121
LYS 2430.0119
GLY 2440.0150
THR 2450.0165
LEU 2460.0219
ALA 2470.0238
TRP 2480.0241
ALA 2490.0308
ARG 2500.0343
THR 2510.0422
GLY 2520.0338
PHE 2530.0156
SER 2540.0106
PRO 2550.0201
ALA 2560.0309
LYS 2570.0282
LYS 2580.0121
LEU 2590.0213
ASN 2600.0277
ALA 2610.0240
GLY 2620.0174
VAL 2630.0131
VAL 2640.0092
ARG 2650.0100
VAL 2660.0135
PHE 2670.0146
PHE 2680.0179
LEU 2690.0200
ASN 2700.0202
GLN 2710.0119
LYS 2720.0166
LYS 2730.0243
ALA 2740.0220
LYS 2750.0203
ASP 2760.0333
VAL 2770.0334
LEU 2780.0319
ARG 2790.0392
LYS 2800.0435
THR 2810.0247
SER 2820.0142
ARG 2830.0124
PRO 2840.0278
MET 2850.0378
VAL 2860.0523
ASP 2870.0332
LEU 2880.0149
THR 2890.0119
PHE 2900.0337
GLY 2910.0286
GLY 2920.0558

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.