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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0731
GLU 270.0137
PRO 280.0161
CYS 290.0128
VAL 300.0150
GLU 310.0128
VAL 320.0150
VAL 330.0119
PRO 340.0078
ASN 350.0031
ILE 360.0070
THR 370.0087
TYR 380.0080
GLN 390.0109
CYS 400.0088
MET 410.0116
GLU 420.0128
LEU 430.0120
ASN 440.0104
PHE 450.0070
TYR 460.0053
LYS 470.0037
ILE 480.0026
PRO 490.0048
ASP 500.0069
ASN 510.0087
LEU 520.0052
PRO 530.0045
PHE 540.0071
SER 550.0065
THR 560.0048
LYS 570.0080
ASN 580.0083
LEU 590.0063
ASP 600.0078
LEU 610.0061
SER 620.0087
PHE 630.0096
ASN 640.0071
PRO 650.0060
LEU 660.0036
ARG 670.0057
HIS 680.0054
LEU 690.0053
GLY 700.0052
SER 710.0055
TYR 720.0055
SER 730.0045
PHE 740.0050
PHE 750.0064
SER 760.0066
PHE 770.0065
PRO 780.0090
GLU 790.0090
LEU 800.0079
GLN 810.0096
VAL 820.0082
LEU 830.0072
ASP 840.0074
LEU 850.0069
SER 860.0080
ARG 870.0070
CYS 880.0064
GLU 890.0070
ILE 900.0066
GLN 910.0072
THR 920.0069
ILE 930.0064
GLU 940.0064
ASP 950.0062
GLY 960.0061
ALA 970.0058
TYR 980.0064
GLN 990.0070
SER 1000.0072
LEU 1010.0074
SER 1020.0075
HIS 1030.0082
LEU 1040.0074
SER 1050.0077
THR 1060.0072
LEU 1070.0060
ILE 1080.0059
LEU 1090.0057
THR 1100.0055
GLY 1110.0055
ASN 1120.0064
PRO 1130.0070
ILE 1140.0070
GLN 1150.0076
SER 1160.0077
LEU 1170.0071
ALA 1180.0075
LEU 1190.0069
GLY 1200.0066
ALA 1210.0065
PHE 1220.0059
SER 1230.0059
GLY 1240.0061
LEU 1250.0061
SER 1260.0060
SER 1270.0044
LEU 1280.0042
GLN 1290.0051
LYS 1300.0051
LEU 1310.0041
VAL 1320.0030
ALA 1330.0028
VAL 1340.0031
GLU 1350.0030
THR 1360.0030
ASN 1370.0020
LEU 1380.0026
ALA 1390.0031
SER 1400.0040
LEU 1410.0046
GLU 1420.0045
ASN 1430.0044
PHE 1440.0044
PRO 1450.0045
ILE 1460.0044
GLY 1470.0048
HIS 1480.0051
LEU 1490.0045
LYS 1500.0047
THR 1510.0046
LEU 1520.0044
LYS 1530.0055
GLU 1540.0050
LEU 1550.0042
ASN 1560.0039
VAL 1570.0034
ALA 1580.0037
HIS 1590.0040
ASN 1600.0039
LEU 1610.0040
ILE 1620.0055
GLN 1630.0054
SER 1640.0054
PHE 1650.0054
LYS 1660.0056
LEU 1670.0052
PRO 1680.0054
GLU 1690.0061
TYR 1700.0062
PHE 1710.0059
SER 1720.0067
ASN 1730.0065
LEU 1740.0059
THR 1750.0068
ASN 1760.0065
LEU 1770.0059
GLU 1780.0063
HIS 1790.0058
LEU 1800.0052
ASP 1810.0049
LEU 1820.0052
SER 1830.0052
SER 1840.0053
ASN 1850.0054
LYS 1860.0056
ILE 1870.0069
GLN 1880.0068
SER 1890.0067
ILE 1900.0063
TYR 1910.0069
CYS 1920.0060
THR 1930.0059
ASP 1940.0058
LEU 1950.0052
ARG 1960.0052
VAL 1970.0056
LEU 1980.0055
HIS 1990.0055
GLN 2000.0062
MET 2010.0066
PRO 2020.0068
LEU 2030.0072
LEU 2040.0067
ASN 2050.0068
LEU 2060.0063
SER 2070.0060
LEU 2080.0059
ASP 2090.0058
LEU 2100.0056
SER 2110.0053
LEU 2120.0058
ASN 2130.0062
PRO 2140.0063
MET 2150.0061
ASN 2160.0064
PHE 2170.0069
ILE 2180.0064
GLN 2190.0071
PRO 2200.0069
GLY 2210.0066
ALA 2220.0061
PHE 2230.0054
LYS 2240.0055
GLU 2250.0051
ILE 2260.0049
ARG 2270.0050
LEU 2280.0051
HIS 2290.0051
LYS 2300.0051
LEU 2310.0050
THR 2320.0050
LEU 2330.0047
ARG 2340.0048
ASN 2350.0049
ASN 2360.0049
PHE 2370.0046
ASP 2380.0048
SER 2390.0033
LEU 2400.0021
ASN 2410.0024
VAL 2420.0041
MET 2430.0033
LYS 2440.0032
THR 2450.0047
CYS 2460.0049
ILE 2470.0041
GLN 2480.0050
GLY 2490.0057
LEU 2500.0049
ALA 2510.0052
GLY 2520.0054
LEU 2530.0050
GLU 2540.0045
VAL 2550.0041
HIS 2560.0035
ARG 2570.0034
LEU 2580.0033
VAL 2590.0038
LEU 2600.0036
GLY 2610.0042
GLU 2620.0044
PHE 2630.0058
ARG 2640.0066
ASN 2650.0070
GLU 2660.0057
GLY 2670.0072
ASN 2680.0058
LEU 2690.0044
GLU 2700.0050
LYS 2710.0043
PHE 2720.0054
ASP 2730.0057
LYS 2740.0056
SER 2750.0043
ALA 2760.0034
LEU 2770.0028
GLU 2780.0035
GLY 2790.0031
LEU 2800.0026
CYS 2810.0042
ASN 2820.0043
LEU 2830.0040
THR 2840.0040
ILE 2850.0029
GLU 2860.0026
GLU 2870.0023
PHE 2880.0027
ARG 2890.0037
LEU 2900.0044
ALA 2910.0055
TYR 2920.0062
LEU 2930.0062
ASP 2940.0079
TYR 2950.0079
TYR 2960.0089
LEU 2970.0101
ASP 2980.0114
GLY 2990.0102
ILE 3000.0084
ILE 3010.0091
ASP 3020.0075
LEU 3030.0063
PHE 3040.0054
ASN 3050.0059
CYS 3060.0045
LEU 3070.0035
THR 3080.0048
ASN 3090.0044
VAL 3100.0029
SER 3110.0028
SER 3120.0023
PHE 3130.0033
SER 3140.0042
LEU 3150.0055
VAL 3160.0064
SER 3170.0082
VAL 3180.0082
THR 3190.0097
ILE 3200.0097
GLU 3210.0114
ARG 3220.0110
VAL 3230.0093
LYS 3240.0099
ASP 3250.0093
PHE 3260.0076
SER 3270.0088
TYR 3280.0084
ASN 3290.0078
PHE 3300.0064
GLY 3310.0058
TRP 3320.0038
GLN 3330.0034
HIS 3340.0029
LEU 3350.0036
GLU 3360.0038
LEU 3370.0048
VAL 3380.0056
ASN 3390.0072
CYS 3400.0075
LYS 3410.0086
PHE 3420.0081
GLY 3430.0093
GLN 3440.0082
PHE 3450.0066
PRO 3460.0064
THR 3470.0075
LEU 3480.0066
LYS 3490.0070
LEU 3500.0062
LYS 3510.0065
SER 3520.0045
LEU 3530.0039
LYS 3540.0035
ARG 3550.0030
LEU 3560.0032
THR 3570.0029
PHE 3580.0031
THR 3590.0036
SER 3600.0044
ASN 3610.0046
LYS 3620.0062
GLY 3630.0062
GLY 3640.0058
ASN 3650.0049
ALA 3660.0051
PHE 3670.0048
SER 3680.0052
GLU 3690.0051
VAL 3700.0051
ASP 3710.0054
LEU 3720.0049
PRO 3730.0052
SER 3740.0047
LEU 3750.0038
GLU 3760.0032
PHE 3770.0022
LEU 3780.0022
ASP 3790.0025
LEU 3800.0025
SER 3810.0028
ARG 3820.0033
ASN 3830.0028
GLY 3840.0027
LEU 3850.0030
SER 3860.0033
PHE 3870.0036
LYS 3880.0033
GLY 3890.0026
CYS 3900.0023
CYS 3910.0019
SER 3920.0021
GLN 3930.0029
SER 3940.0034
ASP 3950.0035
PHE 3960.0038
GLY 3970.0043
THR 3980.0038
ILE 3990.0035
SER 4000.0035
LEU 4010.0026
LYS 4020.0017
TYR 4030.0017
LEU 4040.0019
ASP 4050.0023
LEU 4060.0026
SER 4070.0033
PHE 4080.0035
ASN 4090.0039
GLY 4100.0040
VAL 4110.0040
ILE 4120.0041
THR 4130.0044
MET 4140.0037
SER 4150.0038
SER 4160.0029
ASN 4170.0030
PHE 4180.0017
LEU 4190.0017
GLY 4200.0020
LEU 4210.0019
GLU 4220.0017
GLN 4230.0021
LEU 4240.0012
GLU 4250.0017
HIS 4260.0009
LEU 4270.0014
ASP 4280.0018
PHE 4290.0023
GLN 4300.0022
HIS 4310.0028
SER 4320.0041
ASN 4330.0049
LEU 4340.0044
LYS 4350.0055
GLN 4360.0059
MET 4370.0060
SER 4380.0072
GLU 4390.0078
PHE 4400.0071
SER 4410.0062
VAL 4420.0047
PHE 4430.0039
LEU 4440.0048
SER 4450.0040
LEU 4460.0034
ARG 4470.0044
ASN 4480.0036
LEU 4490.0025
ILE 4500.0026
TYR 4510.0013
LEU 4520.0016
ASP 4530.0017
ILE 4540.0025
SER 4550.0023
HIS 4560.0032
THR 4570.0039
HIS 4580.0053
THR 4590.0052
ARG 4600.0063
VAL 4610.0062
ALA 4620.0084
PHE 4630.0083
ASN 4640.0081
GLY 4650.0078
ILE 4660.0065
PHE 4670.0055
ASN 4680.0066
GLY 4690.0062
LEU 4700.0050
SER 4710.0058
SER 4720.0048
LEU 4730.0036
GLU 4740.0030
VAL 4750.0017
LEU 4760.0019
LYS 4770.0014
MET 4780.0023
ALA 4790.0024
GLY 4800.0034
ASN 4810.0038
SER 4820.0053
PHE 4830.0056
GLN 4840.0072
GLU 4850.0069
ASN 4860.0053
PHE 4870.0050
LEU 4880.0043
PRO 4890.0051
ASP 4900.0052
ILE 4910.0053
PHE 4920.0049
THR 4930.0060
GLU 4940.0064
LEU 4950.0051
ARG 4960.0055
ASN 4970.0046
LEU 4980.0032
THR 4990.0027
PHE 5000.0014
LEU 5010.0012
ASP 5020.0011
LEU 5030.0016
SER 5040.0019
GLN 5050.0028
CYS 5060.0028
GLN 5070.0040
LEU 5080.0032
GLU 5090.0032
GLN 5100.0027
LEU 5110.0022
SER 5120.0036
PRO 5130.0025
THR 5140.0032
ALA 5150.0032
PHE 5160.0025
ASN 5170.0031
SER 5180.0041
LEU 5190.0032
SER 5200.0037
SER 5210.0037
LEU 5220.0019
GLN 5230.0020
VAL 5240.0013
LEU 5250.0004
ASN 5260.0011
MET 5270.0013
SER 5280.0020
HIS 5290.0027
ASN 5300.0025
ASN 5310.0030
PHE 5320.0030
PHE 5330.0036
SER 5340.0036
LEU 5350.0033
ASP 5360.0035
THR 5370.0030
PHE 5380.0026
PRO 5390.0013
TYR 5400.0018
LYS 5410.0027
CYS 5420.0020
LEU 5430.0020
ASN 5440.0031
SER 5450.0030
LEU 5460.0022
GLN 5470.0025
VAL 5480.0020
LEU 5490.0020
ASP 5500.0019
TYR 5510.0024
SER 5520.0023
LEU 5530.0025
ASN 5540.0027
HIS 5550.0033
ILE 5560.0036
MET 5570.0042
THR 5580.0047
SER 5590.0051
LYS 5600.0060
LYS 5610.0065
GLN 5620.0064
GLU 5630.0054
LEU 5640.0051
GLN 5650.0056
HIS 5660.0047
PHE 5670.0034
PRO 5680.0035
SER 5690.0045
SER 5700.0039
LEU 5710.0033
ALA 5720.0026
PHE 5730.0023
LEU 5740.0025
ASN 5750.0023
LEU 5760.0026
THR 5770.0020
GLN 5780.0022
ASN 5790.0028
ASP 5800.0034
PHE 5810.0034
ALA 5820.0044
CYS 5830.0033
THR 5840.0043
CYS 5850.0033
GLU 5860.0046
HIS 5870.0033
GLN 5880.0016
SER 5890.0035
PHE 5900.0037
LEU 5910.0015
GLN 5920.0022
TRP 5930.0034
ILE 5940.0021
LYS 5950.0025
ASP 5960.0041
GLN 5970.0032
ARG 5980.0023
GLN 5990.0028
LEU 6000.0028
LEU 6010.0019
VAL 6020.0019
GLU 6030.0011
VAL 6040.0006
GLU 6050.0004
ARG 6060.0006
MET 6070.0009
GLU 6080.0027
CYS 6090.0038
ALA 6100.0057
THR 6110.0069
PRO 6120.0084
SER 6130.0110
ASP 6140.0109
LYS 6150.0078
GLN 6160.0081
GLY 6170.0063
MET 6180.0051
PRO 6190.0032
VAL 6200.0015
LEU 6210.0022
SER 6220.0037
LEU 6230.0042
ASN 6240.0066
ILE 6250.0053
THR 6260.0079
CYS 6270.0267
GLU 10.0044
ALA 20.0031
ALA 30.0043
ALA 40.0042
LYS 50.0032
MET 60.0025
GLN 70.0028
ARG 80.0035
LEU 90.0034
VAL 100.0027
LEU 110.0025
LEU 120.0022
LEU 130.0023
ALA 140.0026
ILE 150.0024
SER 160.0019
LEU 170.0034
LEU 180.0020
LEU 190.0010
TYR 200.0030
GLN 210.0014
ASP 220.0016
LEU 230.0031
PRO 240.0025
VAL 250.0043
ARG 260.0076
SER 270.0060
GLU 280.0077
PHE 290.0072
GLU 300.0048
LEU 310.0047
ASP 320.0052
ARG 330.0044
ILE 340.0032
CYS 350.0031
GLY 360.0027
TYR 370.0025
GLY 380.0026
THR 390.0028
ALA 400.0029
ARG 410.0015
CYS 420.0027
ARG 430.0040
LYS 440.0051
LYS 450.0054
CYS 460.0061
ARG 470.0069
SER 480.0077
GLN 490.0070
GLU 500.0061
TYR 510.0062
ARG 520.0043
ILE 530.0049
GLY 540.0046
ARG 550.0042
CYS 560.0049
PRO 570.0082
ASN 580.0082
THR 590.0060
TYR 600.0041
ALA 610.0014
CYS 620.0016
CYS 630.0021
LEU 640.0026
ARG 650.0042
LYS 660.0063
TRP 670.0059
ASP 680.0055
GLU 690.0052
SER 700.0049
LEU 710.0054
LEU 720.0053
ASN 730.0050
ARG 740.0047
THR 750.0047
LYS 760.0047
PRO 770.0059
GLU 780.0064
ALA 790.0092
ALA 800.0101
ALA 810.0251
LYS 820.0221
LYS 830.0192
GLU 840.0154
MET 850.0127
ASN 860.0089
LEU 870.0075
SER 880.0060
VAL 890.0052
GLY 900.0051
LEU 910.0074
GLY 920.0132
GLY 930.0206
GLY 940.0195
SER 950.0153
ASN 960.0062
LEU 970.0059
SER 980.0059
VAL 990.0065
GLY 1000.0085
LEU 1010.0078
GLY 1020.0080
GLU 1030.0092
ILE 1040.0053
GLY 1050.0110
GLY 1060.0150
GLY 1070.0131
SER 1080.0121
LYS 1090.0079
LEU 1100.0083
LEU 1110.0126
ASP 1120.0126
ILE 1130.0114
ASN 1140.0118
LEU 1150.0108
GLY 1160.0083
ARG 1170.0225
GLY 1180.0194
GLY 1190.0195
GLY 1200.0098
SER 1210.0035
MET 1220.0039
VAL 1230.0041
ASP 1240.0043
LEU 1250.0047
THR 1260.0051
PHE 1270.0063
GLY 1280.0085
GLY 1290.0111
VAL 1300.0118
GLY 1310.0125
GLY 1320.0064
GLY 1330.0083
SER 1340.0055
THR 1350.0098
PHE 1360.0053
THR 1370.0059
PHE 1380.0050
PHE 1390.0056
PRO 1400.0059
LEU 1410.0073
VAL 1420.0075
ILE 1430.0098
GLY 1440.0107
GLY 1450.0147
GLY 1460.0088
SER 1470.0089
ASP 1480.0102
ALA 1490.0107
MET 1500.0103
TYR 1510.0084
LEU 1520.0072
GLY 1530.0089
PHE 1540.0078
ALA 1550.0100
ALA 1560.0125
GLY 1570.0157
GLY 1580.0149
GLY 1590.0161
SER 1600.0165
ALA 1610.0172
GLY 1620.0158
GLY 1630.0134
GLU 1640.0096
ASN 1650.0072
HIS 1660.0048
VAL 1670.0046
ALA 1680.0042
PHE 1690.0039
GLY 1700.0038
PRO 1710.0081
GLY 1720.0054
PRO 1730.0049
GLY 1740.0023
VAL 1750.0017
ASP 1760.0013
LEU 1770.0031
THR 1780.0019
PHE 1790.0044
GLY 1800.0033
GLY 1810.0068
VAL 1820.0091
GLN 1830.0094
PHE 1840.0117
ALA 1850.0138
MET 1860.0116
VAL 1870.0125
ASN 1880.0115
ASN 1890.0168
GLY 1900.0160
PRO 1910.0310
GLY 1920.0259
PRO 1930.0146
GLY 1940.0157
GLU 1950.0222
SER 1960.0230
PHE 1970.0226
THR 1980.0132
ALA 1990.0095
GLN 2000.0104
PRO 2010.0091
ALA 2020.0112
ASP 2030.0087
MET 2040.0134
GLN 2050.0197
ALA 2060.0233
GLY 2070.0168
ILE 2080.0126
LYS 2090.0053
GLY 2100.0056
PRO 2110.0091
GLY 2120.0353
PRO 2130.0272
GLY 2140.0381
GLY 2150.0606
SER 2160.0149
ILE 2170.0442
GLN 2180.0110
VAL 2190.0551
ILE 2200.0364
ASN 2210.0453
GLY 2220.0329
SER 2230.0299
THR 2240.0731
ILE 2250.0631
GLY 2260.0571
THR 2270.0264
GLY 2280.0192
SER 2290.0556
LYS 2300.0476
LYS 2310.0349
THR 2320.0295
ILE 2330.0320
LEU 2340.0184
ILE 2350.0308
TYR 2360.0141
SER 2370.0113
ILE 2380.0090
ILE 2390.0069
GLY 2400.0113
VAL 2410.0069
LYS 2420.0064
LYS 2430.0066
GLY 2440.0089
THR 2450.0098
LEU 2460.0201
ALA 2470.0164
TRP 2480.0102
ALA 2490.0145
ARG 2500.0162
THR 2510.0293
GLY 2520.0336
PHE 2530.0216
SER 2540.0230
PRO 2550.0229
ALA 2560.0440
LYS 2570.0531
LYS 2580.0444
LEU 2590.0243
ASN 2600.0201
ALA 2610.0363
GLY 2620.0248
VAL 2630.0212
VAL 2640.0280
ARG 2650.0089
VAL 2660.0075
PHE 2670.0074
PHE 2680.0148
LEU 2690.0167
ASN 2700.0232
GLN 2710.0132
LYS 2720.0152
LYS 2730.0213
ALA 2740.0169
LYS 2750.0154
ASP 2760.0296
VAL 2770.0286
LEU 2780.0248
ARG 2790.0341
LYS 2800.0399
THR 2810.0250
SER 2820.0174
ARG 2830.0134
PRO 2840.0259
MET 2850.0357
VAL 2860.0460
ASP 2870.0324
LEU 2880.0106
THR 2890.0040
PHE 2900.0269
GLY 2910.0204
GLY 2920.0472

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.