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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 75  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0651
GLU 270.0116
PRO 280.0117
CYS 290.0080
VAL 300.0104
GLU 310.0099
VAL 320.0112
VAL 330.0091
PRO 340.0071
ASN 350.0024
ILE 360.0034
THR 370.0048
TYR 380.0035
GLN 390.0053
CYS 400.0024
MET 410.0043
GLU 420.0041
LEU 430.0040
ASN 440.0027
PHE 450.0034
TYR 460.0058
LYS 470.0072
ILE 480.0067
PRO 490.0059
ASP 500.0097
ASN 510.0097
LEU 520.0062
PRO 530.0056
PHE 540.0079
SER 550.0055
THR 560.0038
LYS 570.0065
ASN 580.0064
LEU 590.0048
ASP 600.0050
LEU 610.0037
SER 620.0051
PHE 630.0046
ASN 640.0028
PRO 650.0038
LEU 660.0057
ARG 670.0071
HIS 680.0077
LEU 690.0081
GLY 700.0085
SER 710.0091
TYR 720.0102
SER 730.0082
PHE 740.0083
PHE 750.0098
SER 760.0088
PHE 770.0083
PRO 780.0103
GLU 790.0091
LEU 800.0085
GLN 810.0095
VAL 820.0082
LEU 830.0077
ASP 840.0072
LEU 850.0070
SER 860.0072
ARG 870.0066
CYS 880.0063
GLU 890.0070
ILE 900.0074
GLN 910.0083
THR 920.0081
ILE 930.0083
GLU 940.0085
ASP 950.0089
GLY 960.0090
ALA 970.0088
TYR 980.0090
GLN 990.0100
SER 1000.0097
LEU 1010.0094
SER 1020.0094
HIS 1030.0095
LEU 1040.0088
SER 1050.0090
THR 1060.0083
LEU 1070.0073
ILE 1080.0071
LEU 1090.0069
THR 1100.0068
GLY 1110.0065
ASN 1120.0070
PRO 1130.0074
ILE 1140.0075
GLN 1150.0079
SER 1160.0078
LEU 1170.0073
ALA 1180.0072
LEU 1190.0072
GLY 1200.0074
ALA 1210.0076
PHE 1220.0078
SER 1230.0080
GLY 1240.0079
LEU 1250.0078
SER 1260.0081
SER 1270.0070
LEU 1280.0063
GLN 1290.0066
LYS 1300.0063
LEU 1310.0053
VAL 1320.0047
ALA 1330.0043
VAL 1340.0044
GLU 1350.0043
THR 1360.0042
ASN 1370.0043
LEU 1380.0032
ALA 1390.0024
SER 1400.0020
LEU 1410.0021
GLU 1420.0024
ASN 1430.0025
PHE 1440.0036
PRO 1450.0037
ILE 1460.0043
GLY 1470.0029
HIS 1480.0030
LEU 1490.0042
LYS 1500.0032
THR 1510.0044
LEU 1520.0036
LYS 1530.0044
GLU 1540.0040
LEU 1550.0032
ASN 1560.0031
VAL 1570.0021
ALA 1580.0024
HIS 1590.0026
ASN 1600.0021
LEU 1610.0018
ILE 1620.0019
GLN 1630.0023
SER 1640.0028
PHE 1650.0032
LYS 1660.0034
LEU 1670.0033
PRO 1680.0027
GLU 1690.0033
TYR 1700.0026
PHE 1710.0030
SER 1720.0034
ASN 1730.0023
LEU 1740.0029
THR 1750.0035
ASN 1760.0041
LEU 1770.0031
GLU 1780.0034
HIS 1790.0029
LEU 1800.0024
ASP 1810.0020
LEU 1820.0020
SER 1830.0021
SER 1840.0018
ASN 1850.0016
LYS 1860.0017
ILE 1870.0033
GLN 1880.0038
SER 1890.0043
ILE 1900.0045
TYR 1910.0050
CYS 1920.0051
THR 1930.0050
ASP 1940.0047
LEU 1950.0051
ARG 1960.0054
VAL 1970.0047
LEU 1980.0050
HIS 1990.0056
GLN 2000.0055
MET 2010.0054
PRO 2020.0049
LEU 2030.0052
LEU 2040.0046
ASN 2050.0046
LEU 2060.0040
SER 2070.0031
LEU 2080.0029
ASP 2090.0028
LEU 2100.0027
SER 2110.0026
LEU 2120.0030
ASN 2130.0032
PRO 2140.0038
MET 2150.0041
ASN 2160.0047
PHE 2170.0053
ILE 2180.0052
GLN 2190.0049
PRO 2200.0046
GLY 2210.0046
ALA 2220.0046
PHE 2230.0045
LYS 2240.0042
GLU 2250.0041
ILE 2260.0045
ARG 2270.0030
LEU 2280.0030
HIS 2290.0031
LYS 2300.0030
LEU 2310.0030
THR 2320.0028
LEU 2330.0028
ARG 2340.0032
ASN 2350.0034
ASN 2360.0032
PHE 2370.0055
ASP 2380.0060
SER 2390.0061
LEU 2400.0060
ASN 2410.0063
VAL 2420.0061
MET 2430.0060
LYS 2440.0057
THR 2450.0056
CYS 2460.0057
ILE 2470.0061
GLN 2480.0055
GLY 2490.0056
LEU 2500.0056
ALA 2510.0050
GLY 2520.0048
LEU 2530.0046
GLU 2540.0043
VAL 2550.0042
HIS 2560.0039
ARG 2570.0046
LEU 2580.0044
VAL 2590.0043
LEU 2600.0041
GLY 2610.0041
GLU 2620.0030
PHE 2630.0031
ARG 2640.0031
ASN 2650.0032
GLU 2660.0032
GLY 2670.0055
ASN 2680.0055
LEU 2690.0058
GLU 2700.0063
LYS 2710.0063
PHE 2720.0074
ASP 2730.0076
LYS 2740.0076
SER 2750.0080
ALA 2760.0077
LEU 2770.0075
GLU 2780.0074
GLY 2790.0073
LEU 2800.0072
CYS 2810.0070
ASN 2820.0059
LEU 2830.0058
THR 2840.0054
ILE 2850.0054
GLU 2860.0052
GLU 2870.0054
PHE 2880.0056
ARG 2890.0054
LEU 2900.0056
ALA 2910.0055
TYR 2920.0043
LEU 2930.0050
ASP 2940.0055
TYR 2950.0060
TYR 2960.0057
LEU 2970.0077
ASP 2980.0082
GLY 2990.0081
ILE 3000.0079
ILE 3010.0091
ASP 3020.0090
LEU 3030.0086
PHE 3040.0079
ASN 3050.0083
CYS 3060.0089
LEU 3070.0076
THR 3080.0070
ASN 3090.0069
VAL 3100.0068
SER 3110.0060
SER 3120.0059
PHE 3130.0058
SER 3140.0055
LEU 3150.0054
VAL 3160.0053
SER 3170.0051
VAL 3180.0053
THR 3190.0051
ILE 3200.0055
GLU 3210.0059
ARG 3220.0075
VAL 3230.0061
LYS 3240.0077
ASP 3250.0083
PHE 3260.0062
SER 3270.0074
TYR 3280.0082
ASN 3290.0073
PHE 3300.0068
GLY 3310.0062
TRP 3320.0054
GLN 3330.0044
HIS 3340.0044
LEU 3350.0040
GLU 3360.0042
LEU 3370.0033
VAL 3380.0043
ASN 3390.0045
CYS 3400.0034
LYS 3410.0023
PHE 3420.0023
GLY 3430.0037
GLN 3440.0043
PHE 3450.0036
PRO 3460.0034
THR 3470.0054
LEU 3480.0044
LYS 3490.0059
LEU 3500.0049
LYS 3510.0052
SER 3520.0040
LEU 3530.0029
LYS 3540.0025
ARG 3550.0032
LEU 3560.0028
THR 3570.0038
PHE 3580.0031
THR 3590.0053
SER 3600.0064
ASN 3610.0042
LYS 3620.0038
GLY 3630.0023
GLY 3640.0025
ASN 3650.0041
ALA 3660.0057
PHE 3670.0062
SER 3680.0061
GLU 3690.0067
VAL 3700.0049
ASP 3710.0058
LEU 3720.0045
PRO 3730.0052
SER 3740.0036
LEU 3750.0036
GLU 3760.0044
PHE 3770.0046
LEU 3780.0050
ASP 3790.0061
LEU 3800.0061
SER 3810.0079
ARG 3820.0089
ASN 3830.0079
GLY 3840.0092
LEU 3850.0078
SER 3860.0086
PHE 3870.0094
LYS 3880.0100
GLY 3890.0103
CYS 3900.0096
CYS 3910.0089
SER 3920.0086
GLN 3930.0075
SER 3940.0076
ASP 3950.0073
PHE 3960.0061
GLY 3970.0066
THR 3980.0061
ILE 3990.0068
SER 4000.0057
LEU 4010.0062
LYS 4020.0064
TYR 4030.0071
LEU 4040.0078
ASP 4050.0087
LEU 4060.0093
SER 4070.0100
PHE 4080.0112
ASN 4090.0108
GLY 4100.0116
VAL 4110.0116
ILE 4120.0119
THR 4130.0121
MET 4140.0111
SER 4150.0111
SER 4160.0096
ASN 4170.0092
PHE 4180.0080
LEU 4190.0078
GLY 4200.0073
LEU 4210.0072
GLU 4220.0063
GLN 4230.0060
LEU 4240.0066
GLU 4250.0067
HIS 4260.0078
LEU 4270.0089
ASP 4280.0096
PHE 4290.0101
GLN 4300.0106
HIS 4310.0114
SER 4320.0128
ASN 4330.0139
LEU 4340.0123
LYS 4350.0134
GLN 4360.0132
MET 4370.0118
SER 4380.0128
GLU 4390.0138
PHE 4400.0119
SER 4410.0097
VAL 4420.0097
PHE 4430.0078
LEU 4440.0077
SER 4450.0067
LEU 4460.0060
ARG 4470.0047
ASN 4480.0048
LEU 4490.0052
ILE 4500.0058
TYR 4510.0069
LEU 4520.0074
ASP 4530.0089
ILE 4540.0097
SER 4550.0105
HIS 4560.0122
THR 4570.0127
HIS 4580.0138
THR 4590.0121
ARG 4600.0125
VAL 4610.0108
ALA 4620.0127
PHE 4630.0118
ASN 4640.0105
GLY 4650.0097
ILE 4660.0089
PHE 4670.0067
ASN 4680.0071
GLY 4690.0059
LEU 4700.0044
SER 4710.0049
SER 4720.0043
LEU 4730.0035
GLU 4740.0051
VAL 4750.0057
LEU 4760.0050
LYS 4770.0068
MET 4780.0074
ALA 4790.0082
GLY 4800.0099
ASN 4810.0097
SER 4820.0097
PHE 4830.0092
GLN 4840.0123
GLU 4850.0122
ASN 4860.0089
PHE 4870.0077
LEU 4880.0060
PRO 4890.0071
ASP 4900.0067
ILE 4910.0055
PHE 4920.0043
THR 4930.0066
GLU 4940.0061
LEU 4950.0043
ARG 4960.0066
ASN 4970.0061
LEU 4980.0045
THR 4990.0063
PHE 5000.0055
LEU 5010.0035
ASP 5020.0043
LEU 5030.0038
SER 5040.0049
GLN 5050.0062
CYS 5060.0058
GLN 5070.0063
LEU 5080.0044
GLU 5090.0047
GLN 5100.0049
LEU 5110.0044
SER 5120.0060
PRO 5130.0059
THR 5140.0067
ALA 5150.0047
PHE 5160.0044
ASN 5170.0064
SER 5180.0070
LEU 5190.0058
SER 5200.0081
SER 5210.0082
LEU 5220.0060
GLN 5230.0070
VAL 5240.0059
LEU 5250.0039
ASN 5260.0040
MET 5270.0020
SER 5280.0028
HIS 5290.0033
ASN 5300.0027
ASN 5310.0028
PHE 5320.0023
PHE 5330.0026
SER 5340.0028
LEU 5350.0027
ASP 5360.0028
THR 5370.0023
PHE 5380.0024
PRO 5390.0025
TYR 5400.0033
LYS 5410.0041
CYS 5420.0058
LEU 5430.0055
ASN 5440.0073
SER 5450.0073
LEU 5460.0061
GLN 5470.0056
VAL 5480.0051
LEU 5490.0041
ASP 5500.0041
TYR 5510.0033
SER 5520.0032
LEU 5530.0031
ASN 5540.0036
HIS 5550.0040
ILE 5560.0044
MET 5570.0054
THR 5580.0048
SER 5590.0047
LYS 5600.0053
LYS 5610.0055
GLN 5620.0038
GLU 5630.0032
LEU 5640.0037
GLN 5650.0040
HIS 5660.0036
PHE 5670.0029
PRO 5680.0038
SER 5690.0045
SER 5700.0050
LEU 5710.0045
ALA 5720.0032
PHE 5730.0037
LEU 5740.0034
ASN 5750.0040
LEU 5760.0037
THR 5770.0043
GLN 5780.0051
ASN 5790.0058
ASP 5800.0069
PHE 5810.0067
ALA 5820.0091
CYS 5830.0066
THR 5840.0070
CYS 5850.0071
GLU 5860.0105
HIS 5870.0073
GLN 5880.0070
SER 5890.0085
PHE 5900.0063
LEU 5910.0053
GLN 5920.0066
TRP 5930.0062
ILE 5940.0056
LYS 5950.0081
ASP 5960.0087
GLN 5970.0064
ARG 5980.0069
GLN 5990.0071
LEU 6000.0054
LEU 6010.0057
VAL 6020.0050
GLU 6030.0064
VAL 6040.0066
GLU 6050.0084
ARG 6060.0082
MET 6070.0072
GLU 6080.0098
CYS 6090.0102
ALA 6100.0135
THR 6110.0146
PRO 6120.0167
SER 6130.0218
ASP 6140.0206
LYS 6150.0160
GLN 6160.0183
GLY 6170.0168
MET 6180.0141
PRO 6190.0115
VAL 6200.0078
LEU 6210.0085
SER 6220.0130
LEU 6230.0085
ASN 6240.0072
ILE 6250.0075
THR 6260.0082
CYS 6270.0240
GLU 10.0028
ALA 20.0035
ALA 30.0042
ALA 40.0032
LYS 50.0011
MET 60.0011
GLN 70.0022
ARG 80.0028
LEU 90.0022
VAL 100.0016
LEU 110.0021
LEU 120.0023
LEU 130.0019
ALA 140.0017
ILE 150.0019
SER 160.0016
LEU 170.0018
LEU 180.0017
LEU 190.0021
TYR 200.0019
GLN 210.0012
ASP 220.0037
LEU 230.0041
PRO 240.0031
VAL 250.0027
ARG 260.0069
SER 270.0062
GLU 280.0088
PHE 290.0096
GLU 300.0072
LEU 310.0071
ASP 320.0074
ARG 330.0078
ILE 340.0078
CYS 350.0080
GLY 360.0079
TYR 370.0059
GLY 380.0062
THR 390.0077
ALA 400.0093
ARG 410.0042
CYS 420.0032
ARG 430.0024
LYS 440.0047
LYS 450.0061
CYS 460.0050
ARG 470.0044
SER 480.0048
GLN 490.0033
GLU 500.0035
TYR 510.0053
ARG 520.0079
ILE 530.0104
GLY 540.0122
ARG 550.0118
CYS 560.0086
PRO 570.0095
ASN 580.0057
THR 590.0085
TYR 600.0060
ALA 610.0058
CYS 620.0058
CYS 630.0041
LEU 640.0047
ARG 650.0032
LYS 660.0025
TRP 670.0025
ASP 680.0023
GLU 690.0023
SER 700.0021
LEU 710.0017
LEU 720.0020
ASN 730.0016
ARG 740.0012
THR 750.0016
LYS 760.0025
PRO 770.0057
GLU 780.0060
ALA 790.0099
ALA 800.0110
ALA 810.0292
LYS 820.0279
LYS 830.0235
GLU 840.0197
MET 850.0172
ASN 860.0099
LEU 870.0078
SER 880.0051
VAL 890.0046
GLY 900.0065
LEU 910.0107
GLY 920.0226
GLY 930.0341
GLY 940.0321
SER 950.0222
ASN 960.0051
LEU 970.0029
SER 980.0037
VAL 990.0068
GLY 1000.0120
LEU 1010.0165
GLY 1020.0178
GLU 1030.0169
ILE 1040.0091
GLY 1050.0147
GLY 1060.0263
GLY 1070.0250
SER 1080.0253
LYS 1090.0197
LEU 1100.0200
LEU 1110.0183
ASP 1120.0184
ILE 1130.0152
ASN 1140.0168
LEU 1150.0144
GLY 1160.0180
ARG 1170.0202
GLY 1180.0148
GLY 1190.0141
GLY 1200.0097
SER 1210.0025
MET 1220.0031
VAL 1230.0024
ASP 1240.0044
LEU 1250.0057
THR 1260.0084
PHE 1270.0113
GLY 1280.0167
GLY 1290.0192
VAL 1300.0219
GLY 1310.0211
GLY 1320.0144
GLY 1330.0061
SER 1340.0071
THR 1350.0049
PHE 1360.0079
THR 1370.0096
PHE 1380.0083
PHE 1390.0104
PRO 1400.0091
LEU 1410.0087
VAL 1420.0110
ILE 1430.0107
GLY 1440.0143
GLY 1450.0131
GLY 1460.0138
SER 1470.0111
ASP 1480.0081
ALA 1490.0100
MET 1500.0091
TYR 1510.0077
LEU 1520.0087
GLY 1530.0109
PHE 1540.0123
ALA 1550.0147
ALA 1560.0164
GLY 1570.0139
GLY 1580.0095
GLY 1590.0067
SER 1600.0064
ALA 1610.0037
GLY 1620.0079
GLY 1630.0103
GLU 1640.0099
ASN 1650.0035
HIS 1660.0043
VAL 1670.0025
ALA 1680.0028
PHE 1690.0047
GLY 1700.0076
PRO 1710.0380
GLY 1720.0422
PRO 1730.0436
GLY 1740.0262
VAL 1750.0119
ASP 1760.0068
LEU 1770.0069
THR 1780.0082
PHE 1790.0085
GLY 1800.0107
GLY 1810.0182
VAL 1820.0156
GLN 1830.0127
PHE 1840.0091
ALA 1850.0077
MET 1860.0126
VAL 1870.0168
ASN 1880.0134
ASN 1890.0258
GLY 1900.0224
PRO 1910.0433
GLY 1920.0314
PRO 1930.0152
GLY 1940.0192
GLU 1950.0326
SER 1960.0514
PHE 1970.0380
THR 1980.0202
ALA 1990.0125
GLN 2000.0193
PRO 2010.0163
ALA 2020.0157
ASP 2030.0204
MET 2040.0261
GLN 2050.0271
ALA 2060.0234
GLY 2070.0162
ILE 2080.0070
LYS 2090.0133
GLY 2100.0289
PRO 2110.0164
GLY 2120.0094
PRO 2130.0087
GLY 2140.0140
GLY 2150.0213
SER 2160.0117
ILE 2170.0176
GLN 2180.0140
VAL 2190.0357
ILE 2200.0364
ASN 2210.0407
GLY 2220.0277
SER 2230.0249
THR 2240.0613
ILE 2250.0599
GLY 2260.0466
THR 2270.0144
GLY 2280.0281
SER 2290.0651
LYS 2300.0483
LYS 2310.0307
THR 2320.0218
ILE 2330.0215
LEU 2340.0129
ILE 2350.0145
TYR 2360.0169
SER 2370.0225
ILE 2380.0253
ILE 2390.0231
GLY 2400.0283
VAL 2410.0077
LYS 2420.0048
LYS 2430.0034
GLY 2440.0096
THR 2450.0080
LEU 2460.0035
ALA 2470.0081
TRP 2480.0076
ALA 2490.0151
ARG 2500.0128
THR 2510.0189
GLY 2520.0198
PHE 2530.0067
SER 2540.0115
PRO 2550.0116
ALA 2560.0196
LYS 2570.0252
LYS 2580.0163
LEU 2590.0097
ASN 2600.0042
ALA 2610.0553
GLY 2620.0341
VAL 2630.0318
VAL 2640.0366
ARG 2650.0147
VAL 2660.0159
PHE 2670.0147
PHE 2680.0108
LEU 2690.0173
ASN 2700.0217
GLN 2710.0169
LYS 2720.0103
LYS 2730.0200
ALA 2740.0262
LYS 2750.0237
ASP 2760.0277
VAL 2770.0284
LEU 2780.0297
ARG 2790.0311
LYS 2800.0308
THR 2810.0237
SER 2820.0148
ARG 2830.0149
PRO 2840.0154
MET 2850.0168
VAL 2860.0329
ASP 2870.0180
LEU 2880.0207
THR 2890.0231
PHE 2900.0285
GLY 2910.0313
GLY 2920.0356

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.