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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1308
GLU 270.0061
PRO 280.0069
CYS 290.0049
VAL 300.0059
GLU 310.0047
VAL 320.0057
VAL 330.0042
PRO 340.0020
ASN 350.0008
ILE 360.0026
THR 370.0029
TYR 380.0023
GLN 390.0038
CYS 400.0027
MET 410.0042
GLU 420.0048
LEU 430.0045
ASN 440.0037
PHE 450.0022
TYR 460.0020
LYS 470.0017
ILE 480.0018
PRO 490.0022
ASP 500.0043
ASN 510.0047
LEU 520.0028
PRO 530.0030
PHE 540.0046
SER 550.0040
THR 560.0027
LYS 570.0041
ASN 580.0038
LEU 590.0027
ASP 600.0030
LEU 610.0020
SER 620.0034
PHE 630.0036
ASN 640.0021
PRO 650.0015
LEU 660.0012
ARG 670.0026
HIS 680.0028
LEU 690.0031
GLY 700.0032
SER 710.0037
TYR 720.0041
SER 730.0030
PHE 740.0035
PHE 750.0044
SER 760.0042
PHE 770.0040
PRO 780.0053
GLU 790.0051
LEU 800.0045
GLN 810.0051
VAL 820.0042
LEU 830.0037
ASP 840.0036
LEU 850.0033
SER 860.0038
ARG 870.0033
CYS 880.0029
GLU 890.0033
ILE 900.0033
GLN 910.0038
THR 920.0037
ILE 930.0037
GLU 940.0038
ASP 950.0040
GLY 960.0040
ALA 970.0037
TYR 980.0040
GLN 990.0045
SER 1000.0045
LEU 1010.0045
SER 1020.0043
HIS 1030.0045
LEU 1040.0041
SER 1050.0043
THR 1060.0040
LEU 1070.0034
ILE 1080.0033
LEU 1090.0032
THR 1100.0032
GLY 1110.0032
ASN 1120.0035
PRO 1130.0038
ILE 1140.0038
GLN 1150.0042
SER 1160.0041
LEU 1170.0040
ALA 1180.0040
LEU 1190.0039
GLY 1200.0038
ALA 1210.0038
PHE 1220.0037
SER 1230.0037
GLY 1240.0036
LEU 1250.0036
SER 1260.0036
SER 1270.0027
LEU 1280.0026
GLN 1290.0028
LYS 1300.0027
LEU 1310.0024
VAL 1320.0018
ALA 1330.0017
VAL 1340.0017
GLU 1350.0017
THR 1360.0018
ASN 1370.0016
LEU 1380.0013
ALA 1390.0013
SER 1400.0014
LEU 1410.0015
GLU 1420.0019
ASN 1430.0019
PHE 1440.0021
PRO 1450.0021
ILE 1460.0021
GLY 1470.0019
HIS 1480.0020
LEU 1490.0021
LYS 1500.0018
THR 1510.0020
LEU 1520.0018
LYS 1530.0021
GLU 1540.0018
LEU 1550.0013
ASN 1560.0012
VAL 1570.0007
ALA 1580.0009
HIS 1590.0010
ASN 1600.0008
LEU 1610.0008
ILE 1620.0012
GLN 1630.0012
SER 1640.0013
PHE 1650.0015
LYS 1660.0016
LEU 1670.0018
PRO 1680.0018
GLU 1690.0021
TYR 1700.0021
PHE 1710.0020
SER 1720.0024
ASN 1730.0022
LEU 1740.0020
THR 1750.0025
ASN 1760.0025
LEU 1770.0020
GLU 1780.0021
HIS 1790.0018
LEU 1800.0014
ASP 1810.0011
LEU 1820.0013
SER 1830.0014
SER 1840.0013
ASN 1850.0012
LYS 1860.0012
ILE 1870.0018
GLN 1880.0017
SER 1890.0017
ILE 1900.0017
TYR 1910.0017
CYS 1920.0018
THR 1930.0018
ASP 1940.0018
LEU 1950.0019
ARG 1960.0020
VAL 1970.0020
LEU 1980.0021
HIS 1990.0022
GLN 2000.0024
MET 2010.0025
PRO 2020.0024
LEU 2030.0026
LEU 2040.0024
ASN 2050.0024
LEU 2060.0021
SER 2070.0017
LEU 2080.0016
ASP 2090.0016
LEU 2100.0015
SER 2110.0015
LEU 2120.0017
ASN 2130.0018
PRO 2140.0019
MET 2150.0018
ASN 2160.0019
PHE 2170.0019
ILE 2180.0017
GLN 2190.0017
PRO 2200.0014
GLY 2210.0013
ALA 2220.0015
PHE 2230.0014
LYS 2240.0012
GLU 2250.0012
ILE 2260.0014
ARG 2270.0011
LEU 2280.0012
HIS 2290.0013
LYS 2300.0013
LEU 2310.0013
THR 2320.0013
LEU 2330.0014
ARG 2340.0017
ASN 2350.0019
ASN 2360.0017
PHE 2370.0026
ASP 2380.0032
SER 2390.0031
LEU 2400.0027
ASN 2410.0026
VAL 2420.0024
MET 2430.0022
LYS 2440.0018
THR 2450.0017
CYS 2460.0018
ILE 2470.0018
GLN 2480.0014
GLY 2490.0016
LEU 2500.0015
ALA 2510.0011
GLY 2520.0012
LEU 2530.0013
GLU 2540.0011
VAL 2550.0012
HIS 2560.0011
ARG 2570.0016
LEU 2580.0016
VAL 2590.0018
LEU 2600.0018
GLY 2610.0021
GLU 2620.0016
PHE 2630.0019
ARG 2640.0021
ASN 2650.0024
GLU 2660.0024
GLY 2670.0037
ASN 2680.0033
LEU 2690.0033
GLU 2700.0038
LYS 2710.0036
PHE 2720.0038
ASP 2730.0037
LYS 2740.0033
SER 2750.0029
ALA 2760.0030
LEU 2770.0028
GLU 2780.0024
GLY 2790.0021
LEU 2800.0022
CYS 2810.0021
ASN 2820.0015
LEU 2830.0015
THR 2840.0015
ILE 2850.0016
GLU 2860.0017
GLU 2870.0020
PHE 2880.0023
ARG 2890.0024
LEU 2900.0027
ALA 2910.0028
TYR 2920.0023
LEU 2930.0027
ASP 2940.0033
TYR 2950.0036
TYR 2960.0036
LEU 2970.0045
ASP 2980.0048
GLY 2990.0045
ILE 3000.0040
ILE 3010.0042
ASP 3020.0040
LEU 3030.0039
PHE 3040.0034
ASN 3050.0034
CYS 3060.0031
LEU 3070.0029
THR 3080.0029
ASN 3090.0026
VAL 3100.0025
SER 3110.0024
SER 3120.0025
PHE 3130.0027
SER 3140.0028
LEU 3150.0031
VAL 3160.0032
SER 3170.0033
VAL 3180.0034
THR 3190.0037
ILE 3200.0038
GLU 3210.0041
ARG 3220.0043
VAL 3230.0037
LYS 3240.0040
ASP 3250.0042
PHE 3260.0034
SER 3270.0037
TYR 3280.0038
ASN 3290.0034
PHE 3300.0032
GLY 3310.0028
TRP 3320.0026
GLN 3330.0023
HIS 3340.0023
LEU 3350.0025
GLU 3360.0026
LEU 3370.0027
VAL 3380.0028
ASN 3390.0028
CYS 3400.0027
LYS 3410.0024
PHE 3420.0024
GLY 3430.0022
GLN 3440.0018
PHE 3450.0016
PRO 3460.0021
THR 3470.0027
LEU 3480.0025
LYS 3490.0028
LEU 3500.0026
LYS 3510.0026
SER 3520.0023
LEU 3530.0021
LYS 3540.0020
ARG 3550.0020
LEU 3560.0020
THR 3570.0021
PHE 3580.0019
THR 3590.0023
SER 3600.0025
ASN 3610.0022
LYS 3620.0021
GLY 3630.0014
GLY 3640.0007
ASN 3650.0007
ALA 3660.0009
PHE 3670.0013
SER 3680.0013
GLU 3690.0015
VAL 3700.0016
ASP 3710.0021
LEU 3720.0022
PRO 3730.0024
SER 3740.0021
LEU 3750.0020
GLU 3760.0021
PHE 3770.0018
LEU 3780.0018
ASP 3790.0020
LEU 3800.0019
SER 3810.0023
ARG 3820.0025
ASN 3830.0023
GLY 3840.0026
LEU 3850.0019
SER 3860.0019
PHE 3870.0023
LYS 3880.0023
GLY 3890.0023
CYS 3900.0023
CYS 3910.0021
SER 3920.0020
GLN 3930.0020
SER 3940.0019
ASP 3950.0018
PHE 3960.0018
GLY 3970.0022
THR 3980.0021
ILE 3990.0024
SER 4000.0022
LEU 4010.0021
LYS 4020.0020
TYR 4030.0020
LEU 4040.0021
ASP 4050.0023
LEU 4060.0024
SER 4070.0025
PHE 4080.0030
ASN 4090.0029
GLY 4100.0031
VAL 4110.0030
ILE 4120.0033
THR 4130.0033
MET 4140.0030
SER 4150.0030
SER 4160.0025
ASN 4170.0026
PHE 4180.0021
LEU 4190.0020
GLY 4200.0020
LEU 4210.0020
GLU 4220.0018
GLN 4230.0018
LEU 4240.0018
GLU 4250.0018
HIS 4260.0020
LEU 4270.0023
ASP 4280.0024
PHE 4290.0026
GLN 4300.0027
HIS 4310.0029
SER 4320.0036
ASN 4330.0040
LEU 4340.0035
LYS 4350.0039
GLN 4360.0040
MET 4370.0040
SER 4380.0044
GLU 4390.0047
PHE 4400.0042
SER 4410.0035
VAL 4420.0032
PHE 4430.0026
LEU 4440.0027
SER 4450.0023
LEU 4460.0019
ARG 4470.0017
ASN 4480.0014
LEU 4490.0014
ILE 4500.0014
TYR 4510.0016
LEU 4520.0019
ASP 4530.0023
ILE 4540.0027
SER 4550.0028
HIS 4560.0032
THR 4570.0035
HIS 4580.0041
THR 4590.0038
ARG 4600.0042
VAL 4610.0039
ALA 4620.0049
PHE 4630.0046
ASN 4640.0043
GLY 4650.0040
ILE 4660.0036
PHE 4670.0029
ASN 4680.0031
GLY 4690.0027
LEU 4700.0021
SER 4710.0021
SER 4720.0013
LEU 4730.0011
GLU 4740.0009
VAL 4750.0010
LEU 4760.0015
LYS 4770.0018
MET 4780.0022
ALA 4790.0023
GLY 4800.0029
ASN 4810.0030
SER 4820.0034
PHE 4830.0034
GLN 4840.0043
GLU 4850.0040
ASN 4860.0030
PHE 4870.0027
LEU 4880.0024
PRO 4890.0028
ASP 4900.0027
ILE 4910.0026
PHE 4920.0022
THR 4930.0027
GLU 4940.0027
LEU 4950.0019
ARG 4960.0021
ASN 4970.0014
LEU 4980.0009
THR 4990.0009
PHE 5000.0006
LEU 5010.0007
ASP 5020.0011
LEU 5030.0012
SER 5040.0014
GLN 5050.0018
CYS 5060.0017
GLN 5070.0021
LEU 5080.0015
GLU 5090.0013
GLN 5100.0013
LEU 5110.0013
SER 5120.0019
PRO 5130.0016
THR 5140.0020
ALA 5150.0017
PHE 5160.0014
ASN 5170.0019
SER 5180.0022
LEU 5190.0015
SER 5200.0020
SER 5210.0017
LEU 5220.0010
GLN 5230.0011
VAL 5240.0009
LEU 5250.0005
ASN 5260.0007
MET 5270.0005
SER 5280.0007
HIS 5290.0009
ASN 5300.0009
ASN 5310.0011
PHE 5320.0019
PHE 5330.0022
SER 5340.0021
LEU 5350.0019
ASP 5360.0018
THR 5370.0014
PHE 5380.0011
PRO 5390.0007
TYR 5400.0009
LYS 5410.0014
CYS 5420.0015
LEU 5430.0013
ASN 5440.0018
SER 5450.0016
LEU 5460.0013
GLN 5470.0013
VAL 5480.0012
LEU 5490.0012
ASP 5500.0012
TYR 5510.0013
SER 5520.0013
LEU 5530.0016
ASN 5540.0017
HIS 5550.0022
ILE 5560.0023
MET 5570.0028
THR 5580.0029
SER 5590.0030
LYS 5600.0037
LYS 5610.0038
GLN 5620.0034
GLU 5630.0026
LEU 5640.0026
GLN 5650.0027
HIS 5660.0020
PHE 5670.0015
PRO 5680.0015
SER 5690.0020
SER 5700.0016
LEU 5710.0015
ALA 5720.0011
PHE 5730.0012
LEU 5740.0013
ASN 5750.0014
LEU 5760.0015
THR 5770.0014
GLN 5780.0019
ASN 5790.0022
ASP 5800.0027
PHE 5810.0026
ALA 5820.0032
CYS 5830.0020
THR 5840.0022
CYS 5850.0019
GLU 5860.0034
HIS 5870.0028
GLN 5880.0022
SER 5890.0032
PHE 5900.0026
LEU 5910.0013
GLN 5920.0019
TRP 5930.0021
ILE 5940.0011
LYS 5950.0016
ASP 5960.0023
GLN 5970.0016
ARG 5980.0012
GLN 5990.0013
LEU 6000.0010
LEU 6010.0010
VAL 6020.0006
GLU 6030.0011
VAL 6040.0010
GLU 6050.0016
ARG 6060.0018
MET 6070.0017
GLU 6080.0027
CYS 6090.0029
ALA 6100.0042
THR 6110.0046
PRO 6120.0047
SER 6130.0065
ASP 6140.0059
LYS 6150.0044
GLN 6160.0054
GLY 6170.0048
MET 6180.0038
PRO 6190.0028
VAL 6200.0015
LEU 6210.0016
SER 6220.0031
LEU 6230.0027
ASN 6240.0035
ILE 6250.0029
THR 6260.0040
CYS 6270.0177
GLU 10.0022
ALA 20.0015
ALA 30.0022
ALA 40.0021
LYS 50.0017
MET 60.0014
GLN 70.0014
ARG 80.0016
LEU 90.0017
VAL 100.0014
LEU 110.0012
LEU 120.0008
LEU 130.0010
ALA 140.0013
ILE 150.0011
SER 160.0012
LEU 170.0021
LEU 180.0012
LEU 190.0007
TYR 200.0020
GLN 210.0012
ASP 220.0008
LEU 230.0018
PRO 240.0014
VAL 250.0028
ARG 260.0033
SER 270.0029
GLU 280.0038
PHE 290.0038
GLU 300.0029
LEU 310.0030
ASP 320.0033
ARG 330.0032
ILE 340.0029
CYS 350.0029
GLY 360.0028
TYR 370.0024
GLY 380.0025
THR 390.0030
ALA 400.0031
ARG 410.0019
CYS 420.0023
ARG 430.0031
LYS 440.0041
LYS 450.0045
CYS 460.0039
ARG 470.0038
SER 480.0041
GLN 490.0034
GLU 500.0034
TYR 510.0037
ARG 520.0034
ILE 530.0037
GLY 540.0035
ARG 550.0030
CYS 560.0027
PRO 570.0038
ASN 580.0040
THR 590.0027
TYR 600.0029
ALA 610.0023
CYS 620.0023
CYS 630.0023
LEU 640.0024
ARG 650.0024
LYS 660.0027
TRP 670.0025
ASP 680.0021
GLU 690.0020
SER 700.0016
LEU 710.0017
LEU 720.0017
ASN 730.0015
ARG 740.0015
THR 750.0017
LYS 760.0033
PRO 770.0066
GLU 780.0063
ALA 790.0101
ALA 800.0120
ALA 810.0245
LYS 820.0215
LYS 830.0170
GLU 840.0144
MET 850.0115
ASN 860.0131
LEU 870.0130
SER 880.0131
VAL 890.0108
GLY 900.0129
LEU 910.0077
GLY 920.0273
GLY 930.0571
GLY 940.0689
SER 950.0489
ASN 960.0236
LEU 970.0156
SER 980.0141
VAL 990.0082
GLY 1000.0068
LEU 1010.0094
GLY 1020.0156
GLU 1030.0170
ILE 1040.0170
GLY 1050.0207
GLY 1060.0117
GLY 1070.0124
SER 1080.0183
LYS 1090.0208
LEU 1100.0280
LEU 1110.0297
ASP 1120.0375
ILE 1130.0287
ASN 1140.0421
LEU 1150.0356
GLY 1160.0608
ARG 1170.0878
GLY 1180.1077
GLY 1190.0895
GLY 1200.0451
SER 1210.0166
MET 1220.0154
VAL 1230.0151
ASP 1240.0144
LEU 1250.0137
THR 1260.0097
PHE 1270.0055
GLY 1280.0044
GLY 1290.0066
VAL 1300.0073
GLY 1310.0093
GLY 1320.0102
GLY 1330.0077
SER 1340.0079
THR 1350.0060
PHE 1360.0109
THR 1370.0098
PHE 1380.0114
PHE 1390.0111
PRO 1400.0133
LEU 1410.0222
VAL 1420.0615
ILE 1430.0713
GLY 1440.1096
GLY 1450.1308
GLY 1460.0253
SER 1470.0203
ASP 1480.0346
ALA 1490.0267
MET 1500.0265
TYR 1510.0111
LEU 1520.0121
GLY 1530.0095
PHE 1540.0106
ALA 1550.0083
ALA 1560.0095
GLY 1570.0068
GLY 1580.0062
GLY 1590.0059
SER 1600.0061
ALA 1610.0069
GLY 1620.0085
GLY 1630.0085
GLU 1640.0078
ASN 1650.0069
HIS 1660.0086
VAL 1670.0074
ALA 1680.0081
PHE 1690.0080
GLY 1700.0077
PRO 1710.0471
GLY 1720.0581
PRO 1730.0631
GLY 1740.0369
VAL 1750.0113
ASP 1760.0052
LEU 1770.0046
THR 1780.0069
PHE 1790.0074
GLY 1800.0101
GLY 1810.0169
VAL 1820.0126
GLN 1830.0083
PHE 1840.0039
ALA 1850.0038
MET 1860.0089
VAL 1870.0180
ASN 1880.0081
ASN 1890.0186
GLY 1900.0155
PRO 1910.0289
GLY 1920.0241
PRO 1930.0155
GLY 1940.0162
GLU 1950.0236
SER 1960.0578
PHE 1970.0355
THR 1980.0271
ALA 1990.0217
GLN 2000.0149
PRO 2010.0183
ALA 2020.0153
ASP 2030.0235
MET 2040.0180
GLN 2050.0124
ALA 2060.0216
GLY 2070.0203
ILE 2080.0148
LYS 2090.0096
GLY 2100.0119
PRO 2110.0086
GLY 2120.0093
PRO 2130.0125
GLY 2140.0164
GLY 2150.0155
SER 2160.0104
ILE 2170.0097
GLN 2180.0193
VAL 2190.0257
ILE 2200.0257
ASN 2210.0605
GLY 2220.0399
SER 2230.0231
THR 2240.0205
ILE 2250.0189
GLY 2260.0111
THR 2270.0056
GLY 2280.0018
SER 2290.0090
LYS 2300.0095
LYS 2310.0109
THR 2320.0137
ILE 2330.0128
LEU 2340.0099
ILE 2350.0189
TYR 2360.0129
SER 2370.0125
ILE 2380.0109
ILE 2390.0064
GLY 2400.0066
VAL 2410.0072
LYS 2420.0056
LYS 2430.0064
GLY 2440.0084
THR 2450.0080
LEU 2460.0103
ALA 2470.0077
TRP 2480.0075
ALA 2490.0087
ARG 2500.0094
THR 2510.0106
GLY 2520.0090
PHE 2530.0056
SER 2540.0058
PRO 2550.0051
ALA 2560.0115
LYS 2570.0139
LYS 2580.0120
LEU 2590.0087
ASN 2600.0097
ALA 2610.0220
GLY 2620.0146
VAL 2630.0148
VAL 2640.0206
ARG 2650.0130
VAL 2660.0088
PHE 2670.0073
PHE 2680.0075
LEU 2690.0102
ASN 2700.0166
GLN 2710.0108
LYS 2720.0071
LYS 2730.0118
ALA 2740.0130
LYS 2750.0086
ASP 2760.0114
VAL 2770.0116
LEU 2780.0114
ARG 2790.0110
LYS 2800.0111
THR 2810.0094
SER 2820.0064
ARG 2830.0062
PRO 2840.0054
MET 2850.0044
VAL 2860.0106
ASP 2870.0064
LEU 2880.0085
THR 2890.0094
PHE 2900.0097
GLY 2910.0119
GLY 2920.0116

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.