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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 77  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2176
GLU 270.0099
PRO 280.0107
CYS 290.0094
VAL 300.0087
GLU 310.0074
VAL 320.0070
VAL 330.0052
PRO 340.0052
ASN 350.0045
ILE 360.0041
THR 370.0054
TYR 380.0065
GLN 390.0075
CYS 400.0083
MET 410.0092
GLU 420.0104
LEU 430.0105
ASN 440.0111
PHE 450.0102
TYR 460.0106
LYS 470.0107
ILE 480.0091
PRO 490.0088
ASP 500.0081
ASN 510.0082
LEU 520.0070
PRO 530.0054
PHE 540.0043
SER 550.0032
THR 560.0042
LYS 570.0036
ASN 580.0045
LEU 590.0054
ASP 600.0064
LEU 610.0073
SER 620.0078
PHE 630.0090
ASN 640.0091
PRO 650.0101
LEU 660.0094
ARG 670.0097
HIS 680.0093
LEU 690.0082
GLY 700.0082
SER 710.0073
TYR 720.0067
SER 730.0072
PHE 740.0060
PHE 750.0054
SER 760.0052
PHE 770.0046
PRO 780.0035
GLU 790.0028
LEU 800.0040
GLN 810.0043
VAL 820.0045
LEU 830.0051
ASP 840.0054
LEU 850.0062
SER 860.0064
ARG 870.0063
CYS 880.0069
GLU 890.0078
ILE 900.0082
GLN 910.0091
THR 920.0088
ILE 930.0077
GLU 940.0080
ASP 950.0075
GLY 960.0062
ALA 970.0065
TYR 980.0056
GLN 990.0055
SER 1000.0048
LEU 1010.0045
SER 1020.0047
HIS 1030.0039
LEU 1040.0044
SER 1050.0046
THR 1060.0048
LEU 1070.0049
ILE 1080.0048
LEU 1090.0052
THR 1100.0052
GLY 1110.0055
ASN 1120.0053
PRO 1130.0063
ILE 1140.0072
GLN 1150.0085
SER 1160.0093
LEU 1170.0056
ALA 1180.0069
LEU 1190.0071
GLY 1200.0068
ALA 1210.0055
PHE 1220.0050
SER 1230.0055
GLY 1240.0054
LEU 1250.0048
SER 1260.0049
SER 1270.0045
LEU 1280.0044
GLN 1290.0045
LYS 1300.0046
LEU 1310.0047
VAL 1320.0051
ALA 1330.0056
VAL 1340.0064
GLU 1350.0069
THR 1360.0062
ASN 1370.0069
LEU 1380.0059
ALA 1390.0053
SER 1400.0048
LEU 1410.0047
GLU 1420.0039
ASN 1430.0049
PHE 1440.0046
PRO 1450.0044
ILE 1460.0039
GLY 1470.0033
HIS 1480.0036
LEU 1490.0038
LYS 1500.0037
THR 1510.0039
LEU 1520.0031
LYS 1530.0034
GLU 1540.0040
LEU 1550.0044
ASN 1560.0051
VAL 1570.0055
ALA 1580.0061
HIS 1590.0075
ASN 1600.0078
LEU 1610.0084
ILE 1620.0080
GLN 1630.0079
SER 1640.0075
PHE 1650.0062
LYS 1660.0075
LEU 1670.0040
PRO 1680.0048
GLU 1690.0045
TYR 1700.0039
PHE 1710.0028
SER 1720.0015
ASN 1730.0019
LEU 1740.0020
THR 1750.0015
ASN 1760.0024
LEU 1770.0024
GLU 1780.0024
HIS 1790.0032
LEU 1800.0038
ASP 1810.0046
LEU 1820.0054
SER 1830.0054
SER 1840.0067
ASN 1850.0074
LYS 1860.0081
ILE 1870.0078
GLN 1880.0077
SER 1890.0086
ILE 1900.0088
TYR 1910.0113
CYS 1920.0099
THR 1930.0101
ASP 1940.0088
LEU 1950.0075
ARG 1960.0080
VAL 1970.0057
LEU 1980.0046
HIS 1990.0058
GLN 2000.0050
MET 2010.0033
PRO 2020.0039
LEU 2030.0029
LEU 2040.0026
ASN 2050.0019
LEU 2060.0025
SER 2070.0039
LEU 2080.0044
ASP 2090.0044
LEU 2100.0047
SER 2110.0042
LEU 2120.0048
ASN 2130.0057
PRO 2140.0059
MET 2150.0062
ASN 2160.0075
PHE 2170.0091
ILE 2180.0094
GLN 2190.0109
PRO 2200.0111
GLY 2210.0116
ALA 2220.0100
PHE 2230.0089
LYS 2240.0094
GLU 2250.0089
ILE 2260.0082
ARG 2270.0064
LEU 2280.0059
HIS 2290.0052
LYS 2300.0049
LEU 2310.0051
THR 2320.0049
LEU 2330.0040
ARG 2340.0040
ASN 2350.0037
ASN 2360.0035
PHE 2370.0039
ASP 2380.0042
SER 2390.0063
LEU 2400.0080
ASN 2410.0094
VAL 2420.0068
MET 2430.0063
LYS 2440.0085
THR 2450.0095
CYS 2460.0085
ILE 2470.0079
GLN 2480.0096
GLY 2490.0098
LEU 2500.0092
ALA 2510.0104
GLY 2520.0099
LEU 2530.0089
GLU 2540.0083
VAL 2550.0071
HIS 2560.0064
ARG 2570.0066
LEU 2580.0052
VAL 2590.0046
LEU 2600.0034
GLY 2610.0039
GLU 2620.0051
PHE 2630.0070
ARG 2640.0095
ASN 2650.0080
GLU 2660.0046
GLY 2670.0064
ASN 2680.0064
LEU 2690.0065
GLU 2700.0090
LYS 2710.0102
PHE 2720.0098
ASP 2730.0119
LYS 2740.0125
SER 2750.0122
ALA 2760.0091
LEU 2770.0079
GLU 2780.0106
GLY 2790.0106
LEU 2800.0089
CYS 2810.0112
ASN 2820.0108
LEU 2830.0096
THR 2840.0092
ILE 2850.0073
GLU 2860.0068
GLU 2870.0061
PHE 2880.0045
ARG 2890.0042
LEU 2900.0038
ALA 2910.0057
TYR 2920.0083
LEU 2930.0083
ASP 2940.0103
TYR 2950.0109
TYR 2960.0130
LEU 2970.0117
ASP 2980.0144
GLY 2990.0126
ILE 3000.0098
ILE 3010.0122
ASP 3020.0124
LEU 3030.0097
PHE 3040.0078
ASN 3050.0103
CYS 3060.0104
LEU 3070.0068
THR 3080.0073
ASN 3090.0080
VAL 3100.0072
SER 3110.0077
SER 3120.0065
PHE 3130.0043
SER 3140.0048
LEU 3150.0050
VAL 3160.0073
SER 3170.0098
VAL 3180.0086
THR 3190.0109
ILE 3200.0106
GLU 3210.0133
ARG 3220.0121
VAL 3230.0091
LYS 3240.0097
ASP 3250.0086
PHE 3260.0058
SER 3270.0075
TYR 3280.0081
ASN 3290.0075
PHE 3300.0068
GLY 3310.0077
TRP 3320.0055
GLN 3330.0061
HIS 3340.0059
LEU 3350.0047
GLU 3360.0054
LEU 3370.0055
VAL 3380.0083
ASN 3390.0104
CYS 3400.0088
LYS 3410.0106
PHE 3420.0097
GLY 3430.0113
GLN 3440.0096
PHE 3450.0077
PRO 3460.0053
THR 3470.0056
LEU 3480.0040
LYS 3490.0039
LEU 3500.0040
LYS 3510.0050
SER 3520.0051
LEU 3530.0049
LYS 3540.0058
ARG 3550.0060
LEU 3560.0055
THR 3570.0066
PHE 3580.0060
THR 3590.0082
SER 3600.0097
ASN 3610.0084
LYS 3620.0105
GLY 3630.0099
GLY 3640.0085
ASN 3650.0073
ALA 3660.0059
PHE 3670.0051
SER 3680.0043
GLU 3690.0039
VAL 3700.0039
ASP 3710.0039
LEU 3720.0046
PRO 3730.0046
SER 3740.0049
LEU 3750.0052
GLU 3760.0060
PHE 3770.0060
LEU 3780.0058
ASP 3790.0062
LEU 3800.0060
SER 3810.0068
ARG 3820.0074
ASN 3830.0070
GLY 3840.0068
LEU 3850.0060
SER 3860.0054
PHE 3870.0039
LYS 3880.0037
GLY 3890.0036
CYS 3900.0037
CYS 3910.0037
SER 3920.0047
GLN 3930.0046
SER 3940.0045
ASP 3950.0046
PHE 3960.0046
GLY 3970.0052
THR 3980.0050
ILE 3990.0051
SER 4000.0050
LEU 4010.0050
LYS 4020.0045
TYR 4030.0045
LEU 4040.0045
ASP 4050.0046
LEU 4060.0045
SER 4070.0039
PHE 4080.0041
ASN 4090.0044
GLY 4100.0044
VAL 4110.0040
ILE 4120.0036
THR 4130.0037
MET 4140.0032
SER 4150.0036
SER 4160.0032
ASN 4170.0030
PHE 4180.0034
LEU 4190.0039
GLY 4200.0046
LEU 4210.0038
GLU 4220.0034
GLN 4230.0034
LEU 4240.0029
GLU 4250.0021
HIS 4260.0021
LEU 4270.0013
ASP 4280.0012
PHE 4290.0017
GLN 4300.0015
HIS 4310.0020
SER 4320.0022
ASN 4330.0030
LEU 4340.0026
LYS 4350.0038
GLN 4360.0039
MET 4370.0036
SER 4380.0042
GLU 4390.0043
PHE 4400.0032
SER 4410.0021
VAL 4420.0028
PHE 4430.0020
LEU 4440.0014
SER 4450.0016
LEU 4460.0012
ARG 4470.0021
ASN 4480.0023
LEU 4490.0021
ILE 4500.0029
TYR 4510.0033
LEU 4520.0031
ASP 4530.0032
ILE 4540.0034
SER 4550.0036
HIS 4560.0038
THR 4570.0034
HIS 4580.0043
THR 4590.0040
ARG 4600.0048
VAL 4610.0046
ALA 4620.0052
PHE 4630.0046
ASN 4640.0045
GLY 4650.0039
ILE 4660.0041
PHE 4670.0042
ASN 4680.0034
GLY 4690.0031
LEU 4700.0040
SER 4710.0044
SER 4720.0054
LEU 4730.0055
GLU 4740.0068
VAL 4750.0070
LEU 4760.0063
LYS 4770.0062
MET 4780.0059
ALA 4790.0060
GLY 4800.0060
ASN 4810.0055
SER 4820.0056
PHE 4830.0054
GLN 4840.0052
GLU 4850.0050
ASN 4860.0049
PHE 4870.0045
LEU 4880.0050
PRO 4890.0049
ASP 4900.0055
ILE 4910.0060
PHE 4920.0061
THR 4930.0059
GLU 4940.0060
LEU 4950.0068
ARG 4960.0075
ASN 4970.0089
LEU 4980.0086
THR 4990.0099
PHE 5000.0097
LEU 5010.0085
ASP 5020.0081
LEU 5030.0071
SER 5040.0074
GLN 5050.0076
CYS 5060.0068
GLN 5070.0059
LEU 5080.0047
GLU 5090.0041
GLN 5100.0034
LEU 5110.0037
SER 5120.0041
PRO 5130.0048
THR 5140.0063
ALA 5150.0062
PHE 5160.0074
ASN 5170.0076
SER 5180.0090
LEU 5190.0092
SER 5200.0103
SER 5210.0112
LEU 5220.0109
GLN 5230.0115
VAL 5240.0105
LEU 5250.0085
ASN 5260.0083
MET 5270.0064
SER 5280.0075
HIS 5290.0085
ASN 5300.0070
ASN 5310.0064
PHE 5320.0049
PHE 5330.0061
SER 5340.0046
LEU 5350.0028
ASP 5360.0037
THR 5370.0046
PHE 5380.0065
PRO 5390.0059
TYR 5400.0072
LYS 5410.0096
CYS 5420.0102
LEU 5430.0101
ASN 5440.0121
SER 5450.0125
LEU 5460.0102
GLN 5470.0108
VAL 5480.0091
LEU 5490.0067
ASP 5500.0066
TYR 5510.0047
SER 5520.0060
LEU 5530.0083
ASN 5540.0072
HIS 5550.0081
ILE 5560.0058
MET 5570.0081
THR 5580.0079
SER 5590.0069
LYS 5600.0081
LYS 5610.0080
GLN 5620.0103
GLU 5630.0087
LEU 5640.0071
GLN 5650.0097
HIS 5660.0095
PHE 5670.0075
PRO 5680.0101
SER 5690.0115
SER 5700.0117
LEU 5710.0087
ALA 5720.0074
PHE 5730.0056
LEU 5740.0031
ASN 5750.0039
LEU 5760.0038
THR 5770.0045
GLN 5780.0072
ASN 5790.0070
ASP 5800.0092
PHE 5810.0086
ALA 5820.0067
CYS 5830.0097
THR 5840.0089
CYS 5850.0112
GLU 5860.0086
HIS 5870.0059
GLN 5880.0057
SER 5890.0078
PHE 5900.0087
LEU 5910.0073
GLN 5920.0083
TRP 5930.0071
ILE 5940.0069
LYS 5950.0084
ASP 5960.0082
GLN 5970.0069
ARG 5980.0059
GLN 5990.0056
LEU 6000.0042
LEU 6010.0030
VAL 6020.0035
GLU 6030.0026
VAL 6040.0044
GLU 6050.0056
ARG 6060.0056
MET 6070.0061
GLU 6080.0089
CYS 6090.0104
ALA 6100.0116
THR 6110.0130
PRO 6120.0178
SER 6130.0221
ASP 6140.0243
LYS 6150.0193
GLN 6160.0174
GLY 6170.0137
MET 6180.0137
PRO 6190.0110
VAL 6200.0098
LEU 6210.0117
SER 6220.0226
LEU 6230.0131
ASN 6240.0051
ILE 6250.0077
THR 6260.0184
CYS 6270.2176
GLU 10.0062
ALA 20.0050
ALA 30.0047
ALA 40.0023
LYS 50.0007
MET 60.0029
GLN 70.0021
ARG 80.0036
LEU 90.0052
VAL 100.0059
LEU 110.0045
LEU 120.0050
LEU 130.0040
ALA 140.0025
ILE 150.0029
SER 160.0011
LEU 170.0019
LEU 180.0023
LEU 190.0039
TYR 200.0045
GLN 210.0051
ASP 220.0055
LEU 230.0061
PRO 240.0071
VAL 250.0070
ARG 260.0084
SER 270.0074
GLU 280.0087
PHE 290.0086
GLU 300.0073
LEU 310.0073
ASP 320.0068
ARG 330.0072
ILE 340.0077
CYS 350.0077
GLY 360.0066
TYR 370.0065
GLY 380.0065
THR 390.0070
ALA 400.0074
ARG 410.0051
CYS 420.0025
ARG 430.0033
LYS 440.0074
LYS 450.0086
CYS 460.0063
ARG 470.0043
SER 480.0051
GLN 490.0054
GLU 500.0066
TYR 510.0083
ARG 520.0105
ILE 530.0135
GLY 540.0143
ARG 550.0129
CYS 560.0082
PRO 570.0075
ASN 580.0049
THR 590.0095
TYR 600.0077
ALA 610.0075
CYS 620.0072
CYS 630.0064
LEU 640.0082
ARG 650.0071
LYS 660.0056
TRP 670.0066
ASP 680.0060
GLU 690.0069
SER 700.0070
LEU 710.0071
LEU 720.0088
ASN 730.0092
ARG 740.0080
THR 750.0086
LYS 760.0094
PRO 770.0082
GLU 780.0093
ALA 790.0094
ALA 800.0074
ALA 810.0028
LYS 820.0043
LYS 830.0025
GLU 840.0048
MET 850.0035
ASN 860.0046
LEU 870.0043
SER 880.0043
VAL 890.0042
GLY 900.0042
LEU 910.0054
GLY 920.0109
GLY 930.0176
GLY 940.0185
SER 950.0127
ASN 960.0054
LEU 970.0041
SER 980.0044
VAL 990.0040
GLY 1000.0049
LEU 1010.0050
GLY 1020.0048
GLU 1030.0056
ILE 1040.0054
GLY 1050.0066
GLY 1060.0092
GLY 1070.0072
SER 1080.0059
LYS 1090.0044
LEU 1100.0034
LEU 1110.0022
ASP 1120.0018
ILE 1130.0019
ASN 1140.0015
LEU 1150.0017
GLY 1160.0018
ARG 1170.0040
GLY 1180.0045
GLY 1190.0055
GLY 1200.0055
SER 1210.0031
MET 1220.0031
VAL 1230.0026
ASP 1240.0033
LEU 1250.0035
THR 1260.0047
PHE 1270.0048
GLY 1280.0056
GLY 1290.0057
VAL 1300.0064
GLY 1310.0089
GLY 1320.0107
GLY 1330.0105
SER 1340.0099
THR 1350.0086
PHE 1360.0056
THR 1370.0051
PHE 1380.0042
PHE 1390.0039
PRO 1400.0036
LEU 1410.0039
VAL 1420.0030
ILE 1430.0067
GLY 1440.0112
GLY 1450.0159
GLY 1460.0144
SER 1470.0104
ASP 1480.0067
ALA 1490.0037
MET 1500.0012
TYR 1510.0018
LEU 1520.0027
GLY 1530.0039
PHE 1540.0048
ALA 1550.0060
ALA 1560.0119
GLY 1570.0122
GLY 1580.0134
GLY 1590.0123
SER 1600.0114
ALA 1610.0078
GLY 1620.0053
GLY 1630.0022
GLU 1640.0046
ASN 1650.0049
HIS 1660.0047
VAL 1670.0040
ALA 1680.0039
PHE 1690.0036
GLY 1700.0039
PRO 1710.0063
GLY 1720.0075
PRO 1730.0095
GLY 1740.0070
VAL 1750.0045
ASP 1760.0038
LEU 1770.0045
THR 1780.0055
PHE 1790.0067
GLY 1800.0084
GLY 1810.0121
VAL 1820.0113
GLN 1830.0084
PHE 1840.0074
ALA 1850.0058
MET 1860.0042
VAL 1870.0044
ASN 1880.0028
ASN 1890.0024
GLY 1900.0010
PRO 1910.0053
GLY 1920.0030
PRO 1930.0038
GLY 1940.0047
GLU 1950.0027
SER 1960.0101
PHE 1970.0047
THR 1980.0052
ALA 1990.0056
GLN 2000.0035
PRO 2010.0046
ALA 2020.0031
ASP 2030.0045
MET 2040.0035
GLN 2050.0019
ALA 2060.0080
GLY 2070.0059
ILE 2080.0037
LYS 2090.0012
GLY 2100.0025
PRO 2110.0040
GLY 2120.0035
PRO 2130.0024
GLY 2140.0053
GLY 2150.0043
SER 2160.0021
ILE 2170.0017
GLN 2180.0030
VAL 2190.0054
ILE 2200.0043
ASN 2210.0051
GLY 2220.0018
SER 2230.0035
THR 2240.0042
ILE 2250.0040
GLY 2260.0046
THR 2270.0033
GLY 2280.0028
SER 2290.0029
LYS 2300.0031
LYS 2310.0032
THR 2320.0043
ILE 2330.0053
LEU 2340.0051
ILE 2350.0080
TYR 2360.0074
SER 2370.0103
ILE 2380.0078
ILE 2390.0092
GLY 2400.0078
VAL 2410.0044
LYS 2420.0063
LYS 2430.0066
GLY 2440.0083
THR 2450.0086
LEU 2460.0068
ALA 2470.0096
TRP 2480.0084
ALA 2490.0120
ARG 2500.0109
THR 2510.0111
GLY 2520.0072
PHE 2530.0045
SER 2540.0008
PRO 2550.0033
ALA 2560.0068
LYS 2570.0044
LYS 2580.0034
LEU 2590.0041
ASN 2600.0050
ALA 2610.0064
GLY 2620.0071
VAL 2630.0058
VAL 2640.0075
ARG 2650.0062
VAL 2660.0067
PHE 2670.0060
PHE 2680.0059
LEU 2690.0058
ASN 2700.0059
GLN 2710.0064
LYS 2720.0042
LYS 2730.0034
ALA 2740.0052
LYS 2750.0039
ASP 2760.0035
VAL 2770.0043
LEU 2780.0052
ARG 2790.0050
LYS 2800.0042
THR 2810.0044
SER 2820.0029
ARG 2830.0019
PRO 2840.0010
MET 2850.0028
VAL 2860.0032
ASP 2870.0028
LEU 2880.0014
THR 2890.0015
PHE 2900.0023
GLY 2910.0019
GLY 2920.0033

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.