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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0649
GLU 270.0070
PRO 280.0078
CYS 290.0053
VAL 300.0044
GLU 310.0023
VAL 320.0017
VAL 330.0020
PRO 340.0034
ASN 350.0047
ILE 360.0038
THR 370.0020
TYR 380.0012
GLN 390.0036
CYS 400.0044
MET 410.0065
GLU 420.0082
LEU 430.0078
ASN 440.0079
PHE 450.0057
TYR 460.0053
LYS 470.0047
ILE 480.0028
PRO 490.0032
ASP 500.0038
ASN 510.0050
LEU 520.0034
PRO 530.0042
PHE 540.0048
SER 550.0050
THR 560.0029
LYS 570.0039
ASN 580.0034
LEU 590.0024
ASP 600.0036
LEU 610.0040
SER 620.0057
PHE 630.0069
ASN 640.0059
PRO 650.0062
LEU 660.0046
ARG 670.0053
HIS 680.0047
LEU 690.0039
GLY 700.0034
SER 710.0032
TYR 720.0024
SER 730.0022
PHE 740.0015
PHE 750.0017
SER 760.0019
PHE 770.0020
PRO 780.0035
GLU 790.0039
LEU 800.0033
GLN 810.0045
VAL 820.0040
LEU 830.0036
ASP 840.0041
LEU 850.0044
SER 860.0053
ARG 870.0049
CYS 880.0047
GLU 890.0052
ILE 900.0051
GLN 910.0056
THR 920.0053
ILE 930.0048
GLU 940.0046
ASP 950.0048
GLY 960.0042
ALA 970.0038
TYR 980.0037
GLN 990.0038
SER 1000.0033
LEU 1010.0036
SER 1020.0038
HIS 1030.0037
LEU 1040.0036
SER 1050.0041
THR 1060.0039
LEU 1070.0036
ILE 1080.0036
LEU 1090.0037
THR 1100.0039
GLY 1110.0040
ASN 1120.0042
PRO 1130.0044
ILE 1140.0047
GLN 1150.0051
SER 1160.0054
LEU 1170.0046
ALA 1180.0050
LEU 1190.0048
GLY 1200.0048
ALA 1210.0045
PHE 1220.0041
SER 1230.0043
GLY 1240.0041
LEU 1250.0038
SER 1260.0038
SER 1270.0028
LEU 1280.0027
GLN 1290.0025
LYS 1300.0025
LEU 1310.0026
VAL 1320.0021
ALA 1330.0021
VAL 1340.0023
GLU 1350.0024
THR 1360.0022
ASN 1370.0024
LEU 1380.0022
ALA 1390.0022
SER 1400.0021
LEU 1410.0020
GLU 1420.0024
ASN 1430.0024
PHE 1440.0018
PRO 1450.0012
ILE 1460.0011
GLY 1470.0009
HIS 1480.0016
LEU 1490.0019
LYS 1500.0016
THR 1510.0019
LEU 1520.0007
LYS 1530.0009
GLU 1540.0011
LEU 1550.0012
ASN 1560.0016
VAL 1570.0021
ALA 1580.0023
HIS 1590.0027
ASN 1600.0029
LEU 1610.0031
ILE 1620.0046
GLN 1630.0051
SER 1640.0048
PHE 1650.0040
LYS 1660.0044
LEU 1670.0032
PRO 1680.0033
GLU 1690.0033
TYR 1700.0021
PHE 1710.0018
SER 1720.0024
ASN 1730.0015
LEU 1740.0009
THR 1750.0017
ASN 1760.0013
LEU 1770.0008
GLU 1780.0006
HIS 1790.0011
LEU 1800.0016
ASP 1810.0021
LEU 1820.0028
SER 1830.0030
SER 1840.0037
ASN 1850.0038
LYS 1860.0043
ILE 1870.0053
GLN 1880.0058
SER 1890.0055
ILE 1900.0049
TYR 1910.0058
CYS 1920.0061
THR 1930.0066
ASP 1940.0055
LEU 1950.0049
ARG 1960.0059
VAL 1970.0048
LEU 1980.0041
HIS 1990.0054
GLN 2000.0056
MET 2010.0045
PRO 2020.0048
LEU 2030.0043
LEU 2040.0031
ASN 2050.0020
LEU 2060.0012
SER 2070.0015
LEU 2080.0021
ASP 2090.0025
LEU 2100.0031
SER 2110.0034
LEU 2120.0042
ASN 2130.0044
PRO 2140.0051
MET 2150.0044
ASN 2160.0048
PHE 2170.0050
ILE 2180.0044
GLN 2190.0050
PRO 2200.0044
GLY 2210.0047
ALA 2220.0048
PHE 2230.0040
LYS 2240.0043
GLU 2250.0044
ILE 2260.0038
ARG 2270.0025
LEU 2280.0020
HIS 2290.0016
LYS 2300.0016
LEU 2310.0021
THR 2320.0024
LEU 2330.0025
ARG 2340.0028
ASN 2350.0032
ASN 2360.0031
PHE 2370.0031
ASP 2380.0033
SER 2390.0024
LEU 2400.0018
ASN 2410.0013
VAL 2420.0026
MET 2430.0022
LYS 2440.0016
THR 2450.0021
CYS 2460.0026
ILE 2470.0022
GLN 2480.0023
GLY 2490.0030
LEU 2500.0028
ALA 2510.0030
GLY 2520.0034
LEU 2530.0030
GLU 2540.0028
VAL 2550.0022
HIS 2560.0021
ARG 2570.0021
LEU 2580.0020
VAL 2590.0020
LEU 2600.0021
GLY 2610.0024
GLU 2620.0030
PHE 2630.0036
ARG 2640.0042
ASN 2650.0046
GLU 2660.0039
GLY 2670.0033
ASN 2680.0030
LEU 2690.0025
GLU 2700.0027
LYS 2710.0026
PHE 2720.0027
ASP 2730.0032
LYS 2740.0034
SER 2750.0031
ALA 2760.0023
LEU 2770.0024
GLU 2780.0030
GLY 2790.0029
LEU 2800.0028
CYS 2810.0036
ASN 2820.0034
LEU 2830.0031
THR 2840.0032
ILE 2850.0027
GLU 2860.0027
GLU 2870.0025
PHE 2880.0024
ARG 2890.0021
LEU 2900.0022
ALA 2910.0020
TYR 2920.0026
LEU 2930.0023
ASP 2940.0025
TYR 2950.0025
TYR 2960.0029
LEU 2970.0023
ASP 2980.0028
GLY 2990.0026
ILE 3000.0021
ILE 3010.0026
ASP 3020.0037
LEU 3030.0031
PHE 3040.0028
ASN 3050.0034
CYS 3060.0033
LEU 3070.0032
THR 3080.0031
ASN 3090.0031
VAL 3100.0030
SER 3110.0028
SER 3120.0025
PHE 3130.0024
SER 3140.0021
LEU 3150.0021
VAL 3160.0019
SER 3170.0020
VAL 3180.0019
THR 3190.0018
ILE 3200.0015
GLU 3210.0018
ARG 3220.0016
VAL 3230.0014
LYS 3240.0012
ASP 3250.0009
PHE 3260.0009
SER 3270.0020
TYR 3280.0017
ASN 3290.0008
PHE 3300.0010
GLY 3310.0014
TRP 3320.0022
GLN 3330.0021
HIS 3340.0020
LEU 3350.0018
GLU 3360.0017
LEU 3370.0016
VAL 3380.0020
ASN 3390.0025
CYS 3400.0023
LYS 3410.0026
PHE 3420.0026
GLY 3430.0037
GLN 3440.0037
PHE 3450.0030
PRO 3460.0027
THR 3470.0029
LEU 3480.0023
LYS 3490.0030
LEU 3500.0023
LYS 3510.0031
SER 3520.0015
LEU 3530.0015
LYS 3540.0020
ARG 3550.0019
LEU 3560.0016
THR 3570.0023
PHE 3580.0016
THR 3590.0020
SER 3600.0029
ASN 3610.0029
LYS 3620.0050
GLY 3630.0054
GLY 3640.0060
ASN 3650.0057
ALA 3660.0069
PHE 3670.0038
SER 3680.0053
GLU 3690.0059
VAL 3700.0051
ASP 3710.0061
LEU 3720.0049
PRO 3730.0060
SER 3740.0055
LEU 3750.0049
GLU 3760.0054
PHE 3770.0045
LEU 3780.0035
ASP 3790.0029
LEU 3800.0022
SER 3810.0021
ARG 3820.0034
ASN 3830.0027
GLY 3840.0032
LEU 3850.0024
SER 3860.0036
PHE 3870.0029
LYS 3880.0044
GLY 3890.0053
CYS 3900.0049
CYS 3910.0060
SER 3920.0076
GLN 3930.0084
SER 3940.0084
ASP 3950.0065
PHE 3960.0063
GLY 3970.0078
THR 3980.0080
ILE 3990.0092
SER 4000.0089
LEU 4010.0076
LYS 4020.0077
TYR 4030.0065
LEU 4040.0052
ASP 4050.0042
LEU 4060.0030
SER 4070.0030
PHE 4080.0025
ASN 4090.0014
GLY 4100.0010
VAL 4110.0011
ILE 4120.0017
THR 4130.0022
MET 4140.0031
SER 4150.0042
SER 4160.0055
ASN 4170.0056
PHE 4180.0067
LEU 4190.0081
GLY 4200.0094
LEU 4210.0086
GLU 4220.0088
GLN 4230.0092
LEU 4240.0078
GLU 4250.0082
HIS 4260.0069
LEU 4270.0047
ASP 4280.0043
PHE 4290.0037
GLN 4300.0037
HIS 4310.0032
SER 4320.0024
ASN 4330.0018
LEU 4340.0021
LYS 4350.0016
GLN 4360.0017
MET 4370.0032
SER 4380.0036
GLU 4390.0028
PHE 4400.0035
SER 4410.0047
VAL 4420.0039
PHE 4430.0051
LEU 4440.0055
SER 4450.0064
LEU 4460.0069
ARG 4470.0069
ASN 4480.0074
LEU 4490.0065
ILE 4500.0070
TYR 4510.0061
LEU 4520.0044
ASP 4530.0043
ILE 4540.0039
SER 4550.0039
HIS 4560.0037
THR 4570.0034
HIS 4580.0040
THR 4590.0043
ARG 4600.0052
VAL 4610.0056
ALA 4620.0061
PHE 4630.0060
ASN 4640.0067
GLY 4650.0061
ILE 4660.0054
PHE 4670.0052
ASN 4680.0054
GLY 4690.0053
LEU 4700.0054
SER 4710.0061
SER 4720.0052
LEU 4730.0047
GLU 4740.0051
VAL 4750.0045
LEU 4760.0041
LYS 4770.0040
MET 4780.0041
ALA 4790.0041
GLY 4800.0041
ASN 4810.0043
SER 4820.0055
PHE 4830.0064
GLN 4840.0077
GLU 4850.0081
ASN 4860.0069
PHE 4870.0066
LEU 4880.0061
PRO 4890.0066
ASP 4900.0067
ILE 4910.0060
PHE 4920.0053
THR 4930.0061
GLU 4940.0057
LEU 4950.0050
ARG 4960.0056
ASN 4970.0042
LEU 4980.0036
THR 4990.0033
PHE 5000.0027
LEU 5010.0029
ASP 5020.0024
LEU 5030.0031
SER 5040.0028
GLN 5050.0035
CYS 5060.0041
GLN 5070.0047
LEU 5080.0045
GLU 5090.0050
GLN 5100.0052
LEU 5110.0049
SER 5120.0058
PRO 5130.0052
THR 5140.0057
ALA 5150.0051
PHE 5160.0043
ASN 5170.0047
SER 5180.0052
LEU 5190.0040
SER 5200.0042
SER 5210.0037
LEU 5220.0021
GLN 5230.0016
VAL 5240.0009
LEU 5250.0010
ASN 5260.0012
MET 5270.0015
SER 5280.0015
HIS 5290.0025
ASN 5300.0027
ASN 5310.0031
PHE 5320.0017
PHE 5330.0019
SER 5340.0024
LEU 5350.0029
ASP 5360.0033
THR 5370.0020
PHE 5380.0020
PRO 5390.0020
TYR 5400.0026
LYS 5410.0034
CYS 5420.0024
LEU 5430.0021
ASN 5440.0028
SER 5450.0027
LEU 5460.0019
GLN 5470.0027
VAL 5480.0025
LEU 5490.0023
ASP 5500.0023
TYR 5510.0023
SER 5520.0028
LEU 5530.0025
ASN 5540.0027
HIS 5550.0027
ILE 5560.0034
MET 5570.0051
THR 5580.0050
SER 5590.0050
LYS 5600.0048
LYS 5610.0048
GLN 5620.0045
GLU 5630.0045
LEU 5640.0045
GLN 5650.0050
HIS 5660.0048
PHE 5670.0033
PRO 5680.0034
SER 5690.0036
SER 5700.0035
LEU 5710.0035
ALA 5720.0044
PHE 5730.0042
LEU 5740.0041
ASN 5750.0039
LEU 5760.0039
THR 5770.0036
GLN 5780.0032
ASN 5790.0043
ASP 5800.0046
PHE 5810.0053
ALA 5820.0077
CYS 5830.0068
THR 5840.0088
CYS 5850.0091
GLU 5860.0106
HIS 5870.0075
GLN 5880.0065
SER 5890.0068
PHE 5900.0064
LEU 5910.0052
GLN 5920.0052
TRP 5930.0054
ILE 5940.0050
LYS 5950.0047
ASP 5960.0051
GLN 5970.0051
ARG 5980.0048
GLN 5990.0049
LEU 6000.0050
LEU 6010.0048
VAL 6020.0040
GLU 6030.0034
VAL 6040.0034
GLU 6050.0030
ARG 6060.0034
MET 6070.0037
GLU 6080.0048
CYS 6090.0065
ALA 6100.0081
THR 6110.0098
PRO 6120.0122
SER 6130.0137
ASP 6140.0131
LYS 6150.0100
GLN 6160.0102
GLY 6170.0076
MET 6180.0067
PRO 6190.0048
VAL 6200.0051
LEU 6210.0036
SER 6220.0045
LEU 6230.0062
ASN 6240.0069
ILE 6250.0058
THR 6260.0073
CYS 6270.0134
GLU 10.0063
ALA 20.0063
ALA 30.0077
ALA 40.0064
LYS 50.0025
MET 60.0032
GLN 70.0050
ARG 80.0057
LEU 90.0046
VAL 100.0046
LEU 110.0042
LEU 120.0045
LEU 130.0039
ALA 140.0029
ILE 150.0032
SER 160.0028
LEU 170.0017
LEU 180.0033
LEU 190.0047
TYR 200.0041
GLN 210.0040
ASP 220.0068
LEU 230.0067
PRO 240.0049
VAL 250.0035
ARG 260.0111
SER 270.0080
GLU 280.0105
PHE 290.0104
GLU 300.0063
LEU 310.0055
ASP 320.0055
ARG 330.0050
ILE 340.0044
CYS 350.0041
GLY 360.0028
TYR 370.0026
GLY 380.0028
THR 390.0031
ALA 400.0040
ARG 410.0034
CYS 420.0048
ARG 430.0048
LYS 440.0068
LYS 450.0063
CYS 460.0040
ARG 470.0035
SER 480.0035
GLN 490.0028
GLU 500.0030
TYR 510.0039
ARG 520.0058
ILE 530.0066
GLY 540.0088
ARG 550.0102
CYS 560.0094
PRO 570.0114
ASN 580.0102
THR 590.0114
TYR 600.0087
ALA 610.0059
CYS 620.0051
CYS 630.0039
LEU 640.0033
ARG 650.0026
LYS 660.0037
TRP 670.0036
ASP 680.0035
GLU 690.0035
SER 700.0036
LEU 710.0035
LEU 720.0038
ASN 730.0042
ARG 740.0035
THR 750.0038
LYS 760.0094
PRO 770.0151
GLU 780.0138
ALA 790.0235
ALA 800.0274
ALA 810.0299
LYS 820.0245
LYS 830.0174
GLU 840.0111
MET 850.0054
ASN 860.0079
LEU 870.0087
SER 880.0080
VAL 890.0084
GLY 900.0080
LEU 910.0046
GLY 920.0048
GLY 930.0071
GLY 940.0101
SER 950.0095
ASN 960.0079
LEU 970.0084
SER 980.0066
VAL 990.0073
GLY 1000.0055
LEU 1010.0072
GLY 1020.0186
GLU 1030.0190
ILE 1040.0213
GLY 1050.0210
GLY 1060.0149
GLY 1070.0171
SER 1080.0193
LYS 1090.0202
LEU 1100.0226
LEU 1110.0238
ASP 1120.0220
ILE 1130.0163
ASN 1140.0179
LEU 1150.0135
GLY 1160.0195
ARG 1170.0459
GLY 1180.0462
GLY 1190.0429
GLY 1200.0248
SER 1210.0055
MET 1220.0032
VAL 1230.0033
ASP 1240.0060
LEU 1250.0092
THR 1260.0083
PHE 1270.0052
GLY 1280.0033
GLY 1290.0053
VAL 1300.0058
GLY 1310.0038
GLY 1320.0045
GLY 1330.0038
SER 1340.0034
THR 1350.0023
PHE 1360.0039
THR 1370.0053
PHE 1380.0046
PHE 1390.0071
PRO 1400.0074
LEU 1410.0074
VAL 1420.0092
ILE 1430.0073
GLY 1440.0085
GLY 1450.0093
GLY 1460.0087
SER 1470.0069
ASP 1480.0051
ALA 1490.0062
MET 1500.0069
TYR 1510.0042
LEU 1520.0043
GLY 1530.0026
PHE 1540.0026
ALA 1550.0016
ALA 1560.0037
GLY 1570.0037
GLY 1580.0045
GLY 1590.0045
SER 1600.0044
ALA 1610.0068
GLY 1620.0071
GLY 1630.0067
GLU 1640.0058
ASN 1650.0053
HIS 1660.0080
VAL 1670.0079
ALA 1680.0086
PHE 1690.0095
GLY 1700.0107
PRO 1710.0151
GLY 1720.0175
PRO 1730.0166
GLY 1740.0105
VAL 1750.0104
ASP 1760.0111
LEU 1770.0035
THR 1780.0097
PHE 1790.0124
GLY 1800.0215
GLY 1810.0368
VAL 1820.0294
GLN 1830.0178
PHE 1840.0072
ALA 1850.0036
MET 1860.0197
VAL 1870.0215
ASN 1880.0100
ASN 1890.0088
GLY 1900.0101
PRO 1910.0139
GLY 1920.0135
PRO 1930.0143
GLY 1940.0106
GLU 1950.0056
SER 1960.0034
PHE 1970.0056
THR 1980.0079
ALA 1990.0084
GLN 2000.0015
PRO 2010.0052
ALA 2020.0050
ASP 2030.0008
MET 2040.0046
GLN 2050.0048
ALA 2060.0176
GLY 2070.0147
ILE 2080.0094
LYS 2090.0074
GLY 2100.0118
PRO 2110.0133
GLY 2120.0164
PRO 2130.0111
GLY 2140.0219
GLY 2150.0364
SER 2160.0159
ILE 2170.0255
GLN 2180.0175
VAL 2190.0299
ILE 2200.0291
ASN 2210.0326
GLY 2220.0229
SER 2230.0205
THR 2240.0293
ILE 2250.0393
GLY 2260.0270
THR 2270.0320
GLY 2280.0356
SER 2290.0439
LYS 2300.0355
LYS 2310.0369
THR 2320.0354
ILE 2330.0395
LEU 2340.0363
ILE 2350.0428
TYR 2360.0463
SER 2370.0649
ILE 2380.0598
ILE 2390.0607
GLY 2400.0617
VAL 2410.0169
LYS 2420.0184
LYS 2430.0129
GLY 2440.0164
THR 2450.0207
LEU 2460.0270
ALA 2470.0454
TRP 2480.0397
ALA 2490.0600
ARG 2500.0509
THR 2510.0518
GLY 2520.0349
PHE 2530.0298
SER 2540.0187
PRO 2550.0243
ALA 2560.0549
LYS 2570.0496
LYS 2580.0415
LEU 2590.0335
ASN 2600.0370
ALA 2610.0462
GLY 2620.0465
VAL 2630.0388
VAL 2640.0388
ARG 2650.0373
VAL 2660.0290
PHE 2670.0260
PHE 2680.0195
LEU 2690.0262
ASN 2700.0415
GLN 2710.0302
LYS 2720.0192
LYS 2730.0239
ALA 2740.0232
LYS 2750.0136
ASP 2760.0098
VAL 2770.0100
LEU 2780.0112
ARG 2790.0080
LYS 2800.0051
THR 2810.0065
SER 2820.0079
ARG 2830.0037
PRO 2840.0036
MET 2850.0035
VAL 2860.0093
ASP 2870.0103
LEU 2880.0093
THR 2890.0092
PHE 2900.0057
GLY 2910.0109
GLY 2920.0104

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.