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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 82  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0910
GLU 270.0031
PRO 280.0032
CYS 290.0027
VAL 300.0024
GLU 310.0020
VAL 320.0016
VAL 330.0011
PRO 340.0014
ASN 350.0011
ILE 360.0008
THR 370.0012
TYR 380.0017
GLN 390.0020
CYS 400.0024
MET 410.0026
GLU 420.0030
LEU 430.0032
ASN 440.0035
PHE 450.0033
TYR 460.0036
LYS 470.0035
ILE 480.0030
PRO 490.0027
ASP 500.0026
ASN 510.0025
LEU 520.0020
PRO 530.0015
PHE 540.0011
SER 550.0007
THR 560.0011
LYS 570.0010
ASN 580.0012
LEU 590.0016
ASP 600.0018
LEU 610.0022
SER 620.0023
PHE 630.0027
ASN 640.0028
PRO 650.0032
LEU 660.0031
ARG 670.0032
HIS 680.0029
LEU 690.0025
GLY 700.0024
SER 710.0021
TYR 720.0021
SER 730.0022
PHE 740.0019
PHE 750.0017
SER 760.0016
PHE 770.0015
PRO 780.0012
GLU 790.0010
LEU 800.0013
GLN 810.0014
VAL 820.0015
LEU 830.0017
ASP 840.0017
LEU 850.0020
SER 860.0021
ARG 870.0020
CYS 880.0022
GLU 890.0025
ILE 900.0027
GLN 910.0030
THR 920.0026
ILE 930.0023
GLU 940.0022
ASP 950.0021
GLY 960.0017
ALA 970.0019
TYR 980.0017
GLN 990.0017
SER 1000.0016
LEU 1010.0015
SER 1020.0016
HIS 1030.0014
LEU 1040.0015
SER 1050.0015
THR 1060.0016
LEU 1070.0016
ILE 1080.0017
LEU 1090.0018
THR 1100.0019
GLY 1110.0020
ASN 1120.0018
PRO 1130.0021
ILE 1140.0023
GLN 1150.0026
SER 1160.0028
LEU 1170.0013
ALA 1180.0016
LEU 1190.0017
GLY 1200.0017
ALA 1210.0014
PHE 1220.0013
SER 1230.0015
GLY 1240.0015
LEU 1250.0014
SER 1260.0014
SER 1270.0013
LEU 1280.0012
GLN 1290.0012
LYS 1300.0013
LEU 1310.0013
VAL 1320.0017
ALA 1330.0018
VAL 1340.0021
GLU 1350.0024
THR 1360.0022
ASN 1370.0027
LEU 1380.0021
ALA 1390.0018
SER 1400.0016
LEU 1410.0015
GLU 1420.0016
ASN 1430.0019
PHE 1440.0015
PRO 1450.0013
ILE 1460.0008
GLY 1470.0006
HIS 1480.0006
LEU 1490.0006
LYS 1500.0005
THR 1510.0007
LEU 1520.0004
LYS 1530.0006
GLU 1540.0008
LEU 1550.0009
ASN 1560.0012
VAL 1570.0014
ALA 1580.0017
HIS 1590.0024
ASN 1600.0025
LEU 1610.0029
ILE 1620.0023
GLN 1630.0022
SER 1640.0023
PHE 1650.0020
LYS 1660.0027
LEU 1670.0019
PRO 1680.0023
GLU 1690.0026
TYR 1700.0022
PHE 1710.0017
SER 1720.0017
ASN 1730.0013
LEU 1740.0009
THR 1750.0008
ASN 1760.0004
LEU 1770.0006
GLU 1780.0003
HIS 1790.0003
LEU 1800.0006
ASP 1810.0008
LEU 1820.0012
SER 1830.0012
SER 1840.0017
ASN 1850.0019
LYS 1860.0022
ILE 1870.0016
GLN 1880.0015
SER 1890.0022
ILE 1900.0027
TYR 1910.0036
CYS 1920.0037
THR 1930.0039
ASP 1940.0034
LEU 1950.0033
ARG 1960.0038
VAL 1970.0030
LEU 1980.0027
HIS 1990.0031
GLN 2000.0031
MET 2010.0026
PRO 2020.0022
LEU 2030.0020
LEU 2040.0017
ASN 2050.0013
LEU 2060.0011
SER 2070.0012
LEU 2080.0011
ASP 2090.0010
LEU 2100.0009
SER 2110.0009
LEU 2120.0011
ASN 2130.0008
PRO 2140.0007
MET 2150.0011
ASN 2160.0017
PHE 2170.0025
ILE 2180.0029
GLN 2190.0036
PRO 2200.0041
GLY 2210.0045
ALA 2220.0038
PHE 2230.0035
LYS 2240.0041
GLU 2250.0042
ILE 2260.0037
ARG 2270.0027
LEU 2280.0023
HIS 2290.0022
LYS 2300.0018
LEU 2310.0015
THR 2320.0015
LEU 2330.0011
ARG 2340.0017
ASN 2350.0020
ASN 2360.0013
PHE 2370.0021
ASP 2380.0030
SER 2390.0035
LEU 2400.0036
ASN 2410.0038
VAL 2420.0029
MET 2430.0025
LYS 2440.0033
THR 2450.0034
CYS 2460.0026
ILE 2470.0028
GLN 2480.0036
GLY 2490.0034
LEU 2500.0032
ALA 2510.0040
GLY 2520.0040
LEU 2530.0034
GLU 2540.0033
VAL 2550.0027
HIS 2560.0027
ARG 2570.0026
LEU 2580.0018
VAL 2590.0018
LEU 2600.0015
GLY 2610.0022
GLU 2620.0027
PHE 2630.0032
ARG 2640.0043
ASN 2650.0037
GLU 2660.0027
GLY 2670.0041
ASN 2680.0037
LEU 2690.0035
GLU 2700.0045
LYS 2710.0042
PHE 2720.0035
ASP 2730.0041
LYS 2740.0040
SER 2750.0038
ALA 2760.0025
LEU 2770.0025
GLU 2780.0035
GLY 2790.0033
LEU 2800.0028
CYS 2810.0038
ASN 2820.0040
LEU 2830.0034
THR 2840.0034
ILE 2850.0027
GLU 2860.0028
GLU 2870.0025
PHE 2880.0018
ARG 2890.0020
LEU 2900.0020
ALA 2910.0030
TYR 2920.0035
LEU 2930.0034
ASP 2940.0040
TYR 2950.0038
TYR 2960.0038
LEU 2970.0038
ASP 2980.0043
GLY 2990.0034
ILE 3000.0024
ILE 3010.0029
ASP 3020.0034
LEU 3030.0025
PHE 3040.0019
ASN 3050.0027
CYS 3060.0027
LEU 3070.0020
THR 3080.0023
ASN 3090.0028
VAL 3100.0026
SER 3110.0030
SER 3120.0027
PHE 3130.0019
SER 3140.0025
LEU 3150.0027
VAL 3160.0039
SER 3170.0048
VAL 3180.0041
THR 3190.0045
ILE 3200.0038
GLU 3210.0043
ARG 3220.0037
VAL 3230.0027
LYS 3240.0028
ASP 3250.0022
PHE 3260.0014
SER 3270.0023
TYR 3280.0024
ASN 3290.0025
PHE 3300.0021
GLY 3310.0026
TRP 3320.0019
GLN 3330.0023
HIS 3340.0023
LEU 3350.0018
GLU 3360.0023
LEU 3370.0034
VAL 3380.0044
ASN 3390.0051
CYS 3400.0046
LYS 3410.0050
PHE 3420.0046
GLY 3430.0050
GLN 3440.0040
PHE 3450.0031
PRO 3460.0026
THR 3470.0020
LEU 3480.0012
LYS 3490.0015
LEU 3500.0014
LYS 3510.0022
SER 3520.0018
LEU 3530.0014
LYS 3540.0016
ARG 3550.0016
LEU 3560.0014
THR 3570.0024
PHE 3580.0024
THR 3590.0034
SER 3600.0043
ASN 3610.0041
LYS 3620.0051
GLY 3630.0054
GLY 3640.0049
ASN 3650.0032
ALA 3660.0029
PHE 3670.0022
SER 3680.0021
GLU 3690.0018
VAL 3700.0011
ASP 3710.0013
LEU 3720.0009
PRO 3730.0012
SER 3740.0012
LEU 3750.0007
GLU 3760.0009
PHE 3770.0011
LEU 3780.0010
ASP 3790.0015
LEU 3800.0016
SER 3810.0021
ARG 3820.0023
ASN 3830.0025
GLY 3840.0025
LEU 3850.0021
SER 3860.0027
PHE 3870.0019
LYS 3880.0021
GLY 3890.0020
CYS 3900.0015
CYS 3910.0013
SER 3920.0012
GLN 3930.0011
SER 3940.0015
ASP 3950.0013
PHE 3960.0009
GLY 3970.0010
THR 3980.0007
ILE 3990.0006
SER 4000.0006
LEU 4010.0002
LYS 4020.0004
TYR 4030.0005
LEU 4040.0006
ASP 4050.0010
LEU 4060.0011
SER 4070.0009
PHE 4080.0010
ASN 4090.0012
GLY 4100.0016
VAL 4110.0017
ILE 4120.0013
THR 4130.0014
MET 4140.0013
SER 4150.0014
SER 4160.0013
ASN 4170.0010
PHE 4180.0009
LEU 4190.0009
GLY 4200.0008
LEU 4210.0006
GLU 4220.0005
GLN 4230.0003
LEU 4240.0004
GLU 4250.0003
HIS 4260.0005
LEU 4270.0007
ASP 4280.0007
PHE 4290.0005
GLN 4300.0005
HIS 4310.0005
SER 4320.0007
ASN 4330.0008
LEU 4340.0008
LYS 4350.0009
GLN 4360.0010
MET 4370.0006
SER 4380.0005
GLU 4390.0006
PHE 4400.0007
SER 4410.0008
VAL 4420.0008
PHE 4430.0008
LEU 4440.0008
SER 4450.0009
LEU 4460.0008
ARG 4470.0009
ASN 4480.0010
LEU 4490.0009
ILE 4500.0009
TYR 4510.0008
LEU 4520.0008
ASP 4530.0007
ILE 4540.0004
SER 4550.0005
HIS 4560.0006
THR 4570.0005
HIS 4580.0005
THR 4590.0002
ARG 4600.0004
VAL 4610.0005
ALA 4620.0007
PHE 4630.0008
ASN 4640.0010
GLY 4650.0011
ILE 4660.0007
PHE 4670.0008
ASN 4680.0011
GLY 4690.0012
LEU 4700.0012
SER 4710.0014
SER 4720.0015
LEU 4730.0012
GLU 4740.0013
VAL 4750.0011
LEU 4760.0008
LYS 4770.0006
MET 4780.0003
ALA 4790.0005
GLY 4800.0007
ASN 4810.0005
SER 4820.0008
PHE 4830.0009
GLN 4840.0013
GLU 4850.0016
ASN 4860.0013
PHE 4870.0012
LEU 4880.0009
PRO 4890.0012
ASP 4900.0013
ILE 4910.0011
PHE 4920.0011
THR 4930.0015
GLU 4940.0016
LEU 4950.0014
ARG 4960.0017
ASN 4970.0017
LEU 4980.0013
THR 4990.0014
PHE 5000.0011
LEU 5010.0007
ASP 5020.0006
LEU 5030.0003
SER 5040.0007
GLN 5050.0010
CYS 5060.0008
GLN 5070.0011
LEU 5080.0009
GLU 5090.0011
GLN 5100.0011
LEU 5110.0009
SER 5120.0014
PRO 5130.0013
THR 5140.0014
ALA 5150.0011
PHE 5160.0010
ASN 5170.0014
SER 5180.0016
LEU 5190.0013
SER 5200.0015
SER 5210.0016
LEU 5220.0011
GLN 5230.0011
VAL 5240.0009
LEU 5250.0005
ASN 5260.0005
MET 5270.0005
SER 5280.0008
HIS 5290.0010
ASN 5300.0008
ASN 5310.0010
PHE 5320.0005
PHE 5330.0005
SER 5340.0005
LEU 5350.0004
ASP 5360.0004
THR 5370.0004
PHE 5380.0005
PRO 5390.0005
TYR 5400.0002
LYS 5410.0003
CYS 5420.0009
LEU 5430.0007
ASN 5440.0009
SER 5450.0010
LEU 5460.0007
GLN 5470.0007
VAL 5480.0006
LEU 5490.0004
ASP 5500.0005
TYR 5510.0005
SER 5520.0006
LEU 5530.0007
ASN 5540.0006
HIS 5550.0006
ILE 5560.0005
MET 5570.0005
THR 5580.0006
SER 5590.0007
LYS 5600.0008
LYS 5610.0009
GLN 5620.0010
GLU 5630.0007
LEU 5640.0007
GLN 5650.0007
HIS 5660.0005
PHE 5670.0002
PRO 5680.0002
SER 5690.0004
SER 5700.0005
LEU 5710.0004
ALA 5720.0004
PHE 5730.0004
LEU 5740.0004
ASN 5750.0004
LEU 5760.0005
THR 5770.0004
GLN 5780.0003
ASN 5790.0003
ASP 5800.0004
PHE 5810.0004
ALA 5820.0010
CYS 5830.0008
THR 5840.0011
CYS 5850.0010
GLU 5860.0015
HIS 5870.0009
GLN 5880.0007
SER 5890.0011
PHE 5900.0009
LEU 5910.0005
GLN 5920.0008
TRP 5930.0010
ILE 5940.0007
LYS 5950.0009
ASP 5960.0012
GLN 5970.0010
ARG 5980.0008
GLN 5990.0009
LEU 6000.0007
LEU 6010.0005
VAL 6020.0007
GLU 6030.0006
VAL 6040.0005
GLU 6050.0006
ARG 6060.0004
MET 6070.0005
GLU 6080.0007
CYS 6090.0008
ALA 6100.0012
THR 6110.0015
PRO 6120.0022
SER 6130.0027
ASP 6140.0027
LYS 6150.0019
GLN 6160.0019
GLY 6170.0017
MET 6180.0014
PRO 6190.0011
VAL 6200.0005
LEU 6210.0008
SER 6220.0011
LEU 6230.0007
ASN 6240.0008
ILE 6250.0004
THR 6260.0004
CYS 6270.0021
GLU 10.0012
ALA 20.0011
ALA 30.0009
ALA 40.0010
LYS 50.0012
MET 60.0009
GLN 70.0010
ARG 80.0010
LEU 90.0009
VAL 100.0009
LEU 110.0007
LEU 120.0005
LEU 130.0006
ALA 140.0008
ILE 150.0007
SER 160.0004
LEU 170.0003
LEU 180.0004
LEU 190.0005
TYR 200.0004
GLN 210.0003
ASP 220.0002
LEU 230.0003
PRO 240.0004
VAL 250.0004
ARG 260.0022
SER 270.0021
GLU 280.0030
PHE 290.0034
GLU 300.0026
LEU 310.0025
ASP 320.0025
ARG 330.0027
ILE 340.0026
CYS 350.0026
GLY 360.0021
TYR 370.0020
GLY 380.0022
THR 390.0024
ALA 400.0025
ARG 410.0018
CYS 420.0008
ARG 430.0008
LYS 440.0022
LYS 450.0027
CYS 460.0018
ARG 470.0012
SER 480.0012
GLN 490.0010
GLU 500.0015
TYR 510.0021
ARG 520.0030
ILE 530.0039
GLY 540.0044
ARG 550.0041
CYS 560.0028
PRO 570.0027
ASN 580.0014
THR 590.0029
TYR 600.0022
ALA 610.0021
CYS 620.0021
CYS 630.0017
LEU 640.0021
ARG 650.0015
LYS 660.0017
TRP 670.0024
ASP 680.0020
GLU 690.0025
SER 700.0024
LEU 710.0028
LEU 720.0035
ASN 730.0033
ARG 740.0025
THR 750.0028
LYS 760.0055
PRO 770.0071
GLU 780.0077
ALA 790.0110
ALA 800.0113
ALA 810.0113
LYS 820.0077
LYS 830.0037
GLU 840.0031
MET 850.0030
ASN 860.0080
LEU 870.0090
SER 880.0094
VAL 890.0106
GLY 900.0115
LEU 910.0166
GLY 920.0275
GLY 930.0486
GLY 940.0485
SER 950.0381
ASN 960.0152
LEU 970.0127
SER 980.0090
VAL 990.0085
GLY 1000.0073
LEU 1010.0100
GLY 1020.0115
GLU 1030.0136
ILE 1040.0183
GLY 1050.0229
GLY 1060.0095
GLY 1070.0072
SER 1080.0157
LYS 1090.0203
LEU 1100.0286
LEU 1110.0305
ASP 1120.0297
ILE 1130.0222
ASN 1140.0249
LEU 1150.0189
GLY 1160.0284
ARG 1170.0495
GLY 1180.0447
GLY 1190.0380
GLY 1200.0266
SER 1210.0150
MET 1220.0140
VAL 1230.0110
ASP 1240.0126
LEU 1250.0135
THR 1260.0146
PHE 1270.0138
GLY 1280.0139
GLY 1290.0123
VAL 1300.0128
GLY 1310.0117
GLY 1320.0146
GLY 1330.0141
SER 1340.0156
THR 1350.0143
PHE 1360.0138
THR 1370.0124
PHE 1380.0113
PHE 1390.0102
PRO 1400.0092
LEU 1410.0099
VAL 1420.0147
ILE 1430.0171
GLY 1440.0222
GLY 1450.0277
GLY 1460.0108
SER 1470.0113
ASP 1480.0105
ALA 1490.0132
MET 1500.0136
TYR 1510.0105
LEU 1520.0108
GLY 1530.0086
PHE 1540.0110
ALA 1550.0127
ALA 1560.0152
GLY 1570.0151
GLY 1580.0151
GLY 1590.0146
SER 1600.0142
ALA 1610.0132
GLY 1620.0084
GLY 1630.0067
GLU 1640.0115
ASN 1650.0085
HIS 1660.0133
VAL 1670.0141
ALA 1680.0145
PHE 1690.0162
GLY 1700.0172
PRO 1710.0202
GLY 1720.0227
PRO 1730.0227
GLY 1740.0238
VAL 1750.0213
ASP 1760.0111
LEU 1770.0073
THR 1780.0089
PHE 1790.0183
GLY 1800.0301
GLY 1810.0555
VAL 1820.0500
GLN 1830.0308
PHE 1840.0231
ALA 1850.0104
MET 1860.0254
VAL 1870.0164
ASN 1880.0087
ASN 1890.0125
GLY 1900.0106
PRO 1910.0396
GLY 1920.0262
PRO 1930.0320
GLY 1940.0393
GLU 1950.0221
SER 1960.0201
PHE 1970.0499
THR 1980.0355
ALA 1990.0348
GLN 2000.0329
PRO 2010.0392
ALA 2020.0415
ASP 2030.0309
MET 2040.0268
GLN 2050.0348
ALA 2060.0910
GLY 2070.0585
ILE 2080.0418
LYS 2090.0072
GLY 2100.0387
PRO 2110.0557
GLY 2120.0372
PRO 2130.0221
GLY 2140.0438
GLY 2150.0187
SER 2160.0269
ILE 2170.0162
GLN 2180.0128
VAL 2190.0154
ILE 2200.0236
ASN 2210.0365
GLY 2220.0314
SER 2230.0241
THR 2240.0292
ILE 2250.0332
GLY 2260.0201
THR 2270.0170
GLY 2280.0275
SER 2290.0339
LYS 2300.0173
LYS 2310.0082
THR 2320.0105
ILE 2330.0154
LEU 2340.0181
ILE 2350.0234
TYR 2360.0228
SER 2370.0250
ILE 2380.0182
ILE 2390.0123
GLY 2400.0075
VAL 2410.0086
LYS 2420.0062
LYS 2430.0092
GLY 2440.0136
THR 2450.0130
LEU 2460.0243
ALA 2470.0205
TRP 2480.0148
ALA 2490.0217
ARG 2500.0216
THR 2510.0323
GLY 2520.0257
PHE 2530.0225
SER 2540.0152
PRO 2550.0208
ALA 2560.0397
LYS 2570.0274
LYS 2580.0189
LEU 2590.0144
ASN 2600.0084
ALA 2610.0353
GLY 2620.0331
VAL 2630.0208
VAL 2640.0168
ARG 2650.0128
VAL 2660.0115
PHE 2670.0081
PHE 2680.0048
LEU 2690.0073
ASN 2700.0098
GLN 2710.0076
LYS 2720.0044
LYS 2730.0091
ALA 2740.0108
LYS 2750.0081
ASP 2760.0100
VAL 2770.0108
LEU 2780.0090
ARG 2790.0068
LYS 2800.0085
THR 2810.0098
SER 2820.0086
ARG 2830.0045
PRO 2840.0081
MET 2850.0099
VAL 2860.0054
ASP 2870.0062
LEU 2880.0064
THR 2890.0064
PHE 2900.0053
GLY 2910.0088
GLY 2920.0090

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.