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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0434
GLU 270.0100
PRO 280.0107
CYS 290.0104
VAL 300.0132
GLU 310.0147
VAL 320.0167
VAL 330.0173
PRO 340.0156
ASN 350.0127
ILE 360.0141
THR 370.0128
TYR 380.0105
GLN 390.0097
CYS 400.0070
MET 410.0067
GLU 420.0055
LEU 430.0053
ASN 440.0037
PHE 450.0034
TYR 460.0028
LYS 470.0037
ILE 480.0049
PRO 490.0052
ASP 500.0046
ASN 510.0058
LEU 520.0066
PRO 530.0077
PHE 540.0078
SER 550.0098
THR 560.0095
LYS 570.0100
ASN 580.0093
LEU 590.0076
ASP 600.0069
LEU 610.0052
SER 620.0053
PHE 630.0043
ASN 640.0037
PRO 650.0031
LEU 660.0038
ARG 670.0043
HIS 680.0053
LEU 690.0059
GLY 700.0070
SER 710.0078
TYR 720.0074
SER 730.0068
PHE 740.0068
PHE 750.0075
SER 760.0073
PHE 770.0076
PRO 780.0087
GLU 790.0084
LEU 800.0070
GLN 810.0065
VAL 820.0056
LEU 830.0054
ASP 840.0048
LEU 850.0047
SER 860.0041
ARG 870.0045
CYS 880.0045
GLU 890.0044
ILE 900.0045
GLN 910.0046
THR 920.0052
ILE 930.0050
GLU 940.0063
ASP 950.0065
GLY 960.0061
ALA 970.0057
TYR 980.0054
GLN 990.0063
SER 1000.0066
LEU 1010.0055
SER 1020.0064
HIS 1030.0045
LEU 1040.0033
SER 1050.0016
THR 1060.0017
LEU 1070.0031
ILE 1080.0029
LEU 1090.0030
THR 1100.0030
GLY 1110.0030
ASN 1120.0036
PRO 1130.0036
ILE 1140.0036
GLN 1150.0040
SER 1160.0043
LEU 1170.0038
ALA 1180.0055
LEU 1190.0056
GLY 1200.0045
ALA 1210.0028
PHE 1220.0025
SER 1230.0038
GLY 1240.0031
LEU 1250.0016
SER 1260.0026
SER 1270.0047
LEU 1280.0051
GLN 1290.0073
LYS 1300.0069
LEU 1310.0059
VAL 1320.0047
ALA 1330.0033
VAL 1340.0036
GLU 1350.0025
THR 1360.0013
ASN 1370.0011
LEU 1380.0017
ALA 1390.0030
SER 1400.0044
LEU 1410.0053
GLU 1420.0056
ASN 1430.0054
PHE 1440.0049
PRO 1450.0070
ILE 1460.0076
GLY 1470.0076
HIS 1480.0085
LEU 1490.0079
LYS 1500.0096
THR 1510.0098
LEU 1520.0101
LYS 1530.0109
GLU 1540.0094
LEU 1550.0078
ASN 1560.0065
VAL 1570.0041
ALA 1580.0036
HIS 1590.0031
ASN 1600.0025
LEU 1610.0030
ILE 1620.0049
GLN 1630.0062
SER 1640.0069
PHE 1650.0057
LYS 1660.0076
LEU 1670.0062
PRO 1680.0088
GLU 1690.0109
TYR 1700.0112
PHE 1710.0090
SER 1720.0108
ASN 1730.0119
LEU 1740.0104
THR 1750.0115
ASN 1760.0114
LEU 1770.0096
GLU 1780.0090
HIS 1790.0076
LEU 1800.0061
ASP 1810.0049
LEU 1820.0034
SER 1830.0031
SER 1840.0032
ASN 1850.0037
LYS 1860.0049
ILE 1870.0063
GLN 1880.0081
SER 1890.0097
ILE 1900.0095
TYR 1910.0119
CYS 1920.0111
THR 1930.0118
ASP 1940.0097
LEU 1950.0070
ARG 1960.0084
VAL 1970.0086
LEU 1980.0051
HIS 1990.0058
GLN 2000.0078
MET 2010.0062
PRO 2020.0059
LEU 2030.0062
LEU 2040.0059
ASN 2050.0050
LEU 2060.0040
SER 2070.0028
LEU 2080.0025
ASP 2090.0024
LEU 2100.0034
SER 2110.0034
LEU 2120.0037
ASN 2130.0048
PRO 2140.0062
MET 2150.0071
ASN 2160.0088
PHE 2170.0110
ILE 2180.0105
GLN 2190.0125
PRO 2200.0134
GLY 2210.0128
ALA 2220.0108
PHE 2230.0087
LYS 2240.0103
GLU 2250.0082
ILE 2260.0058
ARG 2270.0046
LEU 2280.0035
HIS 2290.0031
LYS 2300.0032
LEU 2310.0037
THR 2320.0035
LEU 2330.0041
ARG 2340.0035
ASN 2350.0037
ASN 2360.0046
PHE 2370.0054
ASP 2380.0042
SER 2390.0042
LEU 2400.0051
ASN 2410.0057
VAL 2420.0073
MET 2430.0074
LYS 2440.0086
THR 2450.0093
CYS 2460.0092
ILE 2470.0090
GLN 2480.0109
GLY 2490.0104
LEU 2500.0096
ALA 2510.0115
GLY 2520.0109
LEU 2530.0088
GLU 2540.0086
VAL 2550.0071
HIS 2560.0073
ARG 2570.0061
LEU 2580.0053
VAL 2590.0042
LEU 2600.0039
GLY 2610.0032
GLU 2620.0027
PHE 2630.0022
ARG 2640.0014
ASN 2650.0014
GLU 2660.0018
GLY 2670.0012
ASN 2680.0018
LEU 2690.0024
GLU 2700.0019
LYS 2710.0034
PHE 2720.0035
ASP 2730.0039
LYS 2740.0052
SER 2750.0046
ALA 2760.0048
LEU 2770.0055
GLU 2780.0073
GLY 2790.0076
LEU 2800.0074
CYS 2810.0094
ASN 2820.0116
LEU 2830.0098
THR 2840.0099
ILE 2850.0086
GLU 2860.0091
GLU 2870.0066
PHE 2880.0052
ARG 2890.0046
LEU 2900.0035
ALA 2910.0041
TYR 2920.0042
LEU 2930.0038
ASP 2940.0036
TYR 2950.0037
TYR 2960.0044
LEU 2970.0061
ASP 2980.0068
GLY 2990.0067
ILE 3000.0060
ILE 3010.0057
ASP 3020.0025
LEU 3030.0028
PHE 3040.0042
ASN 3050.0040
CYS 3060.0047
LEU 3070.0039
THR 3080.0031
ASN 3090.0038
VAL 3100.0046
SER 3110.0049
SER 3120.0057
PHE 3130.0044
SER 3140.0049
LEU 3150.0047
VAL 3160.0059
SER 3170.0067
VAL 3180.0064
THR 3190.0067
ILE 3200.0070
GLU 3210.0076
ARG 3220.0082
VAL 3230.0083
LYS 3240.0089
ASP 3250.0082
PHE 3260.0081
SER 3270.0089
TYR 3280.0071
ASN 3290.0063
PHE 3300.0046
GLY 3310.0045
TRP 3320.0033
GLN 3330.0042
HIS 3340.0044
LEU 3350.0040
GLU 3360.0046
LEU 3370.0064
VAL 3380.0074
ASN 3390.0081
CYS 3400.0075
LYS 3410.0076
PHE 3420.0082
GLY 3430.0081
GLN 3440.0080
PHE 3450.0080
PRO 3460.0083
THR 3470.0102
LEU 3480.0095
LYS 3490.0104
LEU 3500.0091
LYS 3510.0097
SER 3520.0047
LEU 3530.0051
LYS 3540.0054
ARG 3550.0061
LEU 3560.0065
THR 3570.0055
PHE 3580.0057
THR 3590.0065
SER 3600.0073
ASN 3610.0069
LYS 3620.0084
GLY 3630.0085
GLY 3640.0076
ASN 3650.0065
ALA 3660.0059
PHE 3670.0080
SER 3680.0102
GLU 3690.0124
VAL 3700.0126
ASP 3710.0148
LEU 3720.0134
PRO 3730.0151
SER 3740.0133
LEU 3750.0124
GLU 3760.0127
PHE 3770.0092
LEU 3780.0084
ASP 3790.0073
LEU 3800.0070
SER 3810.0062
ARG 3820.0056
ASN 3830.0050
GLY 3840.0028
LEU 3850.0040
SER 3860.0031
PHE 3870.0064
LYS 3880.0060
GLY 3890.0073
CYS 3900.0090
CYS 3910.0112
SER 3920.0156
GLN 3930.0175
SER 3940.0170
ASP 3950.0140
PHE 3960.0147
GLY 3970.0178
THR 3980.0183
ILE 3990.0208
SER 4000.0197
LEU 4010.0171
LYS 4020.0166
TYR 4030.0141
LEU 4040.0115
ASP 4050.0097
LEU 4060.0076
SER 4070.0092
PHE 4080.0083
ASN 4090.0063
GLY 4100.0056
VAL 4110.0053
ILE 4120.0076
THR 4130.0070
MET 4140.0080
SER 4150.0089
SER 4160.0116
ASN 4170.0123
PHE 4180.0146
LEU 4190.0173
GLY 4200.0202
LEU 4210.0189
GLU 4220.0198
GLN 4230.0212
LEU 4240.0178
GLU 4250.0198
HIS 4260.0171
LEU 4270.0136
ASP 4280.0137
PHE 4290.0117
GLN 4300.0150
HIS 4310.0158
SER 4320.0123
ASN 4330.0119
LEU 4340.0106
LYS 4350.0096
GLN 4360.0090
MET 4370.0113
SER 4380.0109
GLU 4390.0100
PHE 4400.0098
SER 4410.0109
VAL 4420.0102
PHE 4430.0125
LEU 4440.0132
SER 4450.0152
LEU 4460.0165
ARG 4470.0186
ASN 4480.0197
LEU 4490.0172
ILE 4500.0201
TYR 4510.0185
LEU 4520.0158
ASP 4530.0168
ILE 4540.0152
SER 4550.0185
HIS 4560.0196
THR 4570.0179
HIS 4580.0182
THR 4590.0159
ARG 4600.0154
VAL 4610.0135
ALA 4620.0138
PHE 4630.0120
ASN 4640.0110
GLY 4650.0105
ILE 4660.0116
PHE 4670.0114
ASN 4680.0110
GLY 4690.0120
LEU 4700.0133
SER 4710.0149
SER 4720.0160
LEU 4730.0148
GLU 4740.0176
VAL 4750.0175
LEU 4760.0154
LYS 4770.0174
MET 4780.0164
ALA 4790.0190
GLY 4800.0202
ASN 4810.0177
SER 4820.0170
PHE 4830.0150
GLN 4840.0166
GLU 4850.0163
ASN 4860.0142
PHE 4870.0120
LEU 4880.0099
PRO 4890.0094
ASP 4900.0077
ILE 4910.0084
PHE 4920.0080
THR 4930.0075
GLU 4940.0078
LEU 4950.0090
ARG 4960.0101
ASN 4970.0122
LEU 4980.0118
THR 4990.0144
PHE 5000.0143
LEU 5010.0125
ASP 5020.0137
LEU 5030.0125
SER 5040.0146
GLN 5050.0162
CYS 5060.0144
GLN 5070.0138
LEU 5080.0100
GLU 5090.0088
GLN 5100.0076
LEU 5110.0047
SER 5120.0063
PRO 5130.0056
THR 5140.0044
ALA 5150.0033
PHE 5160.0024
ASN 5170.0051
SER 5180.0057
LEU 5190.0064
SER 5200.0080
SER 5210.0099
LEU 5220.0084
GLN 5230.0110
VAL 5240.0103
LEU 5250.0078
ASN 5260.0085
MET 5270.0061
SER 5280.0075
HIS 5290.0078
ASN 5300.0062
ASN 5310.0052
PHE 5320.0029
PHE 5330.0039
SER 5340.0060
LEU 5350.0077
ASP 5360.0079
THR 5370.0065
PHE 5380.0081
PRO 5390.0067
TYR 5400.0071
LYS 5410.0094
CYS 5420.0093
LEU 5430.0081
ASN 5440.0110
SER 5450.0106
LEU 5460.0081
GLN 5470.0090
VAL 5480.0079
LEU 5490.0065
ASP 5500.0057
TYR 5510.0046
SER 5520.0072
LEU 5530.0052
ASN 5540.0049
HIS 5550.0045
ILE 5560.0063
MET 5570.0107
THR 5580.0106
SER 5590.0106
LYS 5600.0112
LYS 5610.0112
GLN 5620.0120
GLU 5630.0112
LEU 5640.0089
GLN 5650.0076
HIS 5660.0091
PHE 5670.0092
PRO 5680.0100
SER 5690.0106
SER 5700.0101
LEU 5710.0086
ALA 5720.0084
PHE 5730.0082
LEU 5740.0083
ASN 5750.0080
LEU 5760.0080
THR 5770.0109
GLN 5780.0113
ASN 5790.0112
ASP 5800.0113
PHE 5810.0108
ALA 5820.0175
CYS 5830.0134
THR 5840.0191
CYS 5850.0230
GLU 5860.0263
HIS 5870.0179
GLN 5880.0167
SER 5890.0166
PHE 5900.0131
LEU 5910.0109
GLN 5920.0129
TRP 5930.0117
ILE 5940.0091
LYS 5950.0101
ASP 5960.0112
GLN 5970.0102
ARG 5980.0095
GLN 5990.0094
LEU 6000.0086
LEU 6010.0086
VAL 6020.0120
GLU 6030.0131
VAL 6040.0125
GLU 6050.0138
ARG 6060.0135
MET 6070.0145
GLU 6080.0148
CYS 6090.0148
ALA 6100.0189
THR 6110.0206
PRO 6120.0242
SER 6130.0280
ASP 6140.0234
LYS 6150.0177
GLN 6160.0225
GLY 6170.0186
MET 6180.0140
PRO 6190.0133
VAL 6200.0116
LEU 6210.0113
SER 6220.0118
LEU 6230.0136
ASN 6240.0192
ILE 6250.0213
THR 6260.0292
CYS 6270.0434
GLU 10.0128
ALA 20.0176
ALA 30.0195
ALA 40.0125
LYS 50.0041
MET 60.0051
GLN 70.0113
ARG 80.0134
LEU 90.0092
VAL 100.0094
LEU 110.0094
LEU 120.0101
LEU 130.0079
ALA 140.0052
ILE 150.0058
SER 160.0078
LEU 170.0057
LEU 180.0140
LEU 190.0168
TYR 200.0100
GLN 210.0117
ASP 220.0227
LEU 230.0204
PRO 240.0136
VAL 250.0071
ARG 260.0372
SER 270.0262
GLU 280.0389
PHE 290.0382
GLU 300.0205
LEU 310.0188
ASP 320.0204
ARG 330.0170
ILE 340.0142
CYS 350.0151
GLY 360.0067
TYR 370.0037
GLY 380.0092
THR 390.0112
ALA 400.0134
ARG 410.0106
CYS 420.0095
ARG 430.0077
LYS 440.0136
LYS 450.0219
CYS 460.0204
ARG 470.0190
SER 480.0225
GLN 490.0169
GLU 500.0173
TYR 510.0270
ARG 520.0288
ILE 530.0318
GLY 540.0335
ARG 550.0308
CYS 560.0251
PRO 570.0293
ASN 580.0196
THR 590.0228
TYR 600.0163
ALA 610.0179
CYS 620.0173
CYS 630.0148
LEU 640.0153
ARG 650.0125
LYS 660.0163
TRP 670.0133
ASP 680.0099
GLU 690.0078
SER 700.0053
LEU 710.0053
LEU 720.0062
ASN 730.0045
ARG 740.0039
THR 750.0056
LYS 760.0070
PRO 770.0077
GLU 780.0070
ALA 790.0099
ALA 800.0111
ALA 810.0090
LYS 820.0088
LYS 830.0059
GLU 840.0061
MET 850.0060
ASN 860.0082
LEU 870.0076
SER 880.0072
VAL 890.0062
GLY 900.0062
LEU 910.0060
GLY 920.0160
GLY 930.0271
GLY 940.0275
SER 950.0170
ASN 960.0069
LEU 970.0053
SER 980.0067
VAL 990.0065
GLY 1000.0079
LEU 1010.0065
GLY 1020.0069
GLU 1030.0066
ILE 1040.0076
GLY 1050.0072
GLY 1060.0119
GLY 1070.0091
SER 1080.0074
LYS 1090.0056
LEU 1100.0037
LEU 1110.0047
ASP 1120.0054
ILE 1130.0049
ASN 1140.0062
LEU 1150.0051
GLY 1160.0043
ARG 1170.0030
GLY 1180.0042
GLY 1190.0054
GLY 1200.0037
SER 1210.0032
MET 1220.0036
VAL 1230.0035
ASP 1240.0038
LEU 1250.0038
THR 1260.0040
PHE 1270.0037
GLY 1280.0049
GLY 1290.0053
VAL 1300.0055
GLY 1310.0049
GLY 1320.0072
GLY 1330.0076
SER 1340.0082
THR 1350.0078
PHE 1360.0057
THR 1370.0053
PHE 1380.0039
PHE 1390.0037
PRO 1400.0023
LEU 1410.0026
VAL 1420.0046
ILE 1430.0097
GLY 1440.0151
GLY 1450.0211
GLY 1460.0114
SER 1470.0078
ASP 1480.0083
ALA 1490.0051
MET 1500.0060
TYR 1510.0039
LEU 1520.0043
GLY 1530.0051
PHE 1540.0066
ALA 1550.0082
ALA 1560.0106
GLY 1570.0111
GLY 1580.0119
GLY 1590.0103
SER 1600.0085
ALA 1610.0073
GLY 1620.0054
GLY 1630.0044
GLU 1640.0054
ASN 1650.0050
HIS 1660.0055
VAL 1670.0052
ALA 1680.0055
PHE 1690.0055
GLY 1700.0057
PRO 1710.0098
GLY 1720.0116
PRO 1730.0146
GLY 1740.0082
VAL 1750.0048
ASP 1760.0049
LEU 1770.0043
THR 1780.0055
PHE 1790.0055
GLY 1800.0071
GLY 1810.0116
VAL 1820.0098
GLN 1830.0075
PHE 1840.0048
ALA 1850.0037
MET 1860.0050
VAL 1870.0091
ASN 1880.0041
ASN 1890.0067
GLY 1900.0015
PRO 1910.0035
GLY 1920.0058
PRO 1930.0049
GLY 1940.0042
GLU 1950.0059
SER 1960.0186
PHE 1970.0135
THR 1980.0031
ALA 1990.0062
GLN 2000.0136
PRO 2010.0113
ALA 2020.0067
ASP 2030.0127
MET 2040.0153
GLN 2050.0109
ALA 2060.0033
GLY 2070.0062
ILE 2080.0081
LYS 2090.0064
GLY 2100.0137
PRO 2110.0052
GLY 2120.0080
PRO 2130.0066
GLY 2140.0081
GLY 2150.0093
SER 2160.0105
ILE 2170.0062
GLN 2180.0134
VAL 2190.0104
ILE 2200.0140
ASN 2210.0235
GLY 2220.0214
SER 2230.0157
THR 2240.0096
ILE 2250.0107
GLY 2260.0112
THR 2270.0160
GLY 2280.0219
SER 2290.0244
LYS 2300.0202
LYS 2310.0117
THR 2320.0156
ILE 2330.0110
LEU 2340.0180
ILE 2350.0169
TYR 2360.0189
SER 2370.0184
ILE 2380.0223
ILE 2390.0225
GLY 2400.0294
VAL 2410.0181
LYS 2420.0156
LYS 2430.0143
GLY 2440.0175
THR 2450.0201
LEU 2460.0263
ALA 2470.0227
TRP 2480.0183
ALA 2490.0188
ARG 2500.0192
THR 2510.0245
GLY 2520.0155
PHE 2530.0140
SER 2540.0152
PRO 2550.0170
ALA 2560.0195
LYS 2570.0078
LYS 2580.0080
LEU 2590.0206
ASN 2600.0233
ALA 2610.0238
GLY 2620.0237
VAL 2630.0252
VAL 2640.0252
ARG 2650.0262
VAL 2660.0194
PHE 2670.0187
PHE 2680.0161
LEU 2690.0164
ASN 2700.0171
GLN 2710.0111
LYS 2720.0056
LYS 2730.0064
ALA 2740.0116
LYS 2750.0123
ASP 2760.0108
VAL 2770.0119
LEU 2780.0123
ARG 2790.0126
LYS 2800.0129
THR 2810.0180
SER 2820.0147
ARG 2830.0068
PRO 2840.0035
MET 2850.0132
VAL 2860.0162
ASP 2870.0139
LEU 2880.0049
THR 2890.0044
PHE 2900.0104
GLY 2910.0094
GLY 2920.0146

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.