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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1002
GLU 270.0033
PRO 280.0039
CYS 290.0032
VAL 300.0040
GLU 310.0036
VAL 320.0036
VAL 330.0025
PRO 340.0031
ASN 350.0026
ILE 360.0008
THR 370.0009
TYR 380.0014
GLN 390.0024
CYS 400.0021
MET 410.0032
GLU 420.0040
LEU 430.0036
ASN 440.0040
PHE 450.0029
TYR 460.0035
LYS 470.0024
ILE 480.0017
PRO 490.0004
ASP 500.0012
ASN 510.0020
LEU 520.0016
PRO 530.0022
PHE 540.0028
SER 550.0024
THR 560.0012
LYS 570.0019
ASN 580.0018
LEU 590.0017
ASP 600.0022
LEU 610.0024
SER 620.0029
PHE 630.0035
ASN 640.0034
PRO 650.0039
LEU 660.0035
ARG 670.0035
HIS 680.0032
LEU 690.0029
GLY 700.0027
SER 710.0028
TYR 720.0029
SER 730.0024
PHE 740.0023
PHE 750.0025
SER 760.0019
PHE 770.0023
PRO 780.0032
GLU 790.0029
LEU 800.0027
GLN 810.0032
VAL 820.0029
LEU 830.0027
ASP 840.0028
LEU 850.0028
SER 860.0031
ARG 870.0027
CYS 880.0030
GLU 890.0032
ILE 900.0034
GLN 910.0037
THR 920.0031
ILE 930.0028
GLU 940.0027
ASP 950.0029
GLY 960.0027
ALA 970.0027
TYR 980.0029
GLN 990.0030
SER 1000.0029
LEU 1010.0030
SER 1020.0030
HIS 1030.0031
LEU 1040.0030
SER 1050.0032
THR 1060.0031
LEU 1070.0024
ILE 1080.0025
LEU 1090.0023
THR 1100.0027
GLY 1110.0027
ASN 1120.0025
PRO 1130.0026
ILE 1140.0027
GLN 1150.0030
SER 1160.0032
LEU 1170.0019
ALA 1180.0017
LEU 1190.0016
GLY 1200.0019
ALA 1210.0021
PHE 1220.0021
SER 1230.0020
GLY 1240.0023
LEU 1250.0024
SER 1260.0024
SER 1270.0023
LEU 1280.0020
GLN 1290.0024
LYS 1300.0024
LEU 1310.0020
VAL 1320.0020
ALA 1330.0021
VAL 1340.0030
GLU 1350.0035
THR 1360.0029
ASN 1370.0046
LEU 1380.0039
ALA 1390.0044
SER 1400.0038
LEU 1410.0030
GLU 1420.0043
ASN 1430.0043
PHE 1440.0030
PRO 1450.0025
ILE 1460.0016
GLY 1470.0025
HIS 1480.0021
LEU 1490.0018
LYS 1500.0020
THR 1510.0021
LEU 1520.0016
LYS 1530.0020
GLU 1540.0017
LEU 1550.0013
ASN 1560.0019
VAL 1570.0021
ALA 1580.0030
HIS 1590.0040
ASN 1600.0040
LEU 1610.0047
ILE 1620.0041
GLN 1630.0042
SER 1640.0034
PHE 1650.0022
LYS 1660.0028
LEU 1670.0031
PRO 1680.0042
GLU 1690.0048
TYR 1700.0045
PHE 1710.0033
SER 1720.0042
ASN 1730.0040
LEU 1740.0031
THR 1750.0033
ASN 1760.0027
LEU 1770.0023
GLU 1780.0021
HIS 1790.0013
LEU 1800.0011
ASP 1810.0015
LEU 1820.0020
SER 1830.0027
SER 1840.0038
ASN 1850.0037
LYS 1860.0041
ILE 1870.0036
GLN 1880.0039
SER 1890.0030
ILE 1900.0019
TYR 1910.0013
CYS 1920.0007
THR 1930.0022
ASP 1940.0023
LEU 1950.0022
ARG 1960.0036
VAL 1970.0040
LEU 1980.0033
HIS 1990.0038
GLN 2000.0050
MET 2010.0047
PRO 2020.0046
LEU 2030.0047
LEU 2040.0038
ASN 2050.0032
LEU 2060.0023
SER 2070.0018
LEU 2080.0010
ASP 2090.0013
LEU 2100.0018
SER 2110.0029
LEU 2120.0040
ASN 2130.0040
PRO 2140.0047
MET 2150.0042
ASN 2160.0048
PHE 2170.0045
ILE 2180.0031
GLN 2190.0026
PRO 2200.0034
GLY 2210.0030
ALA 2220.0014
PHE 2230.0019
LYS 2240.0037
GLU 2250.0046
ILE 2260.0033
ARG 2270.0031
LEU 2280.0027
HIS 2290.0033
LYS 2300.0022
LEU 2310.0011
THR 2320.0017
LEU 2330.0025
ARG 2340.0035
ASN 2350.0049
ASN 2360.0050
PHE 2370.0071
ASP 2380.0087
SER 2390.0086
LEU 2400.0078
ASN 2410.0087
VAL 2420.0075
MET 2430.0062
LYS 2440.0064
THR 2450.0065
CYS 2460.0050
ILE 2470.0041
GLN 2480.0050
GLY 2490.0036
LEU 2500.0024
ALA 2510.0038
GLY 2520.0038
LEU 2530.0025
GLU 2540.0032
VAL 2550.0027
HIS 2560.0038
ARG 2570.0031
LEU 2580.0014
VAL 2590.0018
LEU 2600.0020
GLY 2610.0034
GLU 2620.0046
PHE 2630.0056
ARG 2640.0070
ASN 2650.0072
GLU 2660.0064
GLY 2670.0088
ASN 2680.0073
LEU 2690.0071
GLU 2700.0080
LYS 2710.0072
PHE 2720.0057
ASP 2730.0058
LYS 2740.0051
SER 2750.0053
ALA 2760.0046
LEU 2770.0031
GLU 2780.0044
GLY 2790.0036
LEU 2800.0019
CYS 2810.0035
ASN 2820.0036
LEU 2830.0023
THR 2840.0031
ILE 2850.0028
GLU 2860.0043
GLU 2870.0036
PHE 2880.0023
ARG 2890.0022
LEU 2900.0019
ALA 2910.0031
TYR 2920.0036
LEU 2930.0037
ASP 2940.0039
TYR 2950.0040
TYR 2960.0032
LEU 2970.0029
ASP 2980.0031
GLY 2990.0023
ILE 3000.0016
ILE 3010.0019
ASP 3020.0026
LEU 3030.0017
PHE 3040.0006
ASN 3050.0016
CYS 3060.0008
LEU 3070.0022
THR 3080.0025
ASN 3090.0035
VAL 3100.0036
SER 3110.0045
SER 3120.0041
PHE 3130.0033
SER 3140.0033
LEU 3150.0028
VAL 3160.0032
SER 3170.0031
VAL 3180.0027
THR 3190.0026
ILE 3200.0027
GLU 3210.0030
ARG 3220.0029
VAL 3230.0021
LYS 3240.0023
ASP 3250.0021
PHE 3260.0024
SER 3270.0021
TYR 3280.0023
ASN 3290.0030
PHE 3300.0032
GLY 3310.0040
TRP 3320.0042
GLN 3330.0044
HIS 3340.0041
LEU 3350.0036
GLU 3360.0034
LEU 3370.0033
VAL 3380.0033
ASN 3390.0032
CYS 3400.0032
LYS 3410.0033
PHE 3420.0034
GLY 3430.0037
GLN 3440.0028
PHE 3450.0022
PRO 3460.0025
THR 3470.0026
LEU 3480.0032
LYS 3490.0038
LEU 3500.0044
LYS 3510.0051
SER 3520.0054
LEU 3530.0046
LYS 3540.0043
ARG 3550.0036
LEU 3560.0032
THR 3570.0033
PHE 3580.0028
THR 3590.0026
SER 3600.0027
ASN 3610.0028
LYS 3620.0026
GLY 3630.0037
GLY 3640.0035
ASN 3650.0018
ALA 3660.0019
PHE 3670.0017
SER 3680.0028
GLU 3690.0036
VAL 3700.0039
ASP 3710.0048
LEU 3720.0049
PRO 3730.0056
SER 3740.0055
LEU 3750.0045
GLU 3760.0042
PHE 3770.0028
LEU 3780.0025
ASP 3790.0018
LEU 3800.0016
SER 3810.0010
ARG 3820.0019
ASN 3830.0019
GLY 3840.0018
LEU 3850.0011
SER 3860.0016
PHE 3870.0020
LYS 3880.0035
GLY 3890.0047
CYS 3900.0039
CYS 3910.0041
SER 3920.0053
GLN 3930.0055
SER 3940.0065
ASP 3950.0050
PHE 3960.0046
GLY 3970.0059
THR 3980.0056
ILE 3990.0060
SER 4000.0051
LEU 4010.0038
LYS 4020.0026
TYR 4030.0016
LEU 4040.0016
ASP 4050.0006
LEU 4060.0008
SER 4070.0006
PHE 4080.0014
ASN 4090.0008
GLY 4100.0010
VAL 4110.0012
ILE 4120.0022
THR 4130.0038
MET 4140.0047
SER 4150.0059
SER 4160.0060
ASN 4170.0063
PHE 4180.0054
LEU 4190.0063
GLY 4200.0056
LEU 4210.0043
GLU 4220.0054
GLN 4230.0039
LEU 4240.0034
GLU 4250.0028
HIS 4260.0025
LEU 4270.0027
ASP 4280.0022
PHE 4290.0021
GLN 4300.0022
HIS 4310.0020
SER 4320.0018
ASN 4330.0022
LEU 4340.0029
LYS 4350.0039
GLN 4360.0052
MET 4370.0048
SER 4380.0058
GLU 4390.0061
PHE 4400.0060
SER 4410.0056
VAL 4420.0057
PHE 4430.0054
LEU 4440.0061
SER 4450.0057
LEU 4460.0051
ARG 4470.0060
ASN 4480.0050
LEU 4490.0047
ILE 4500.0046
TYR 4510.0043
LEU 4520.0042
ASP 4530.0037
ILE 4540.0035
SER 4550.0034
HIS 4560.0032
THR 4570.0033
HIS 4580.0030
THR 4590.0032
ARG 4600.0029
VAL 4610.0031
ALA 4620.0039
PHE 4630.0045
ASN 4640.0047
GLY 4650.0053
ILE 4660.0052
PHE 4670.0054
ASN 4680.0059
GLY 4690.0059
LEU 4700.0056
SER 4710.0059
SER 4720.0059
LEU 4730.0054
GLU 4740.0052
VAL 4750.0047
LEU 4760.0044
LYS 4770.0036
MET 4780.0034
ALA 4790.0030
GLY 4800.0029
ASN 4810.0031
SER 4820.0024
PHE 4830.0020
GLN 4840.0022
GLU 4850.0022
ASN 4860.0018
PHE 4870.0015
LEU 4880.0014
PRO 4890.0018
ASP 4900.0026
ILE 4910.0038
PHE 4920.0040
THR 4930.0041
GLU 4940.0048
LEU 4950.0049
ARG 4960.0051
ASN 4970.0053
LEU 4980.0046
THR 4990.0046
PHE 5000.0040
LEU 5010.0032
ASP 5020.0023
LEU 5030.0020
SER 5040.0018
GLN 5050.0022
CYS 5060.0024
GLN 5070.0024
LEU 5080.0019
GLU 5090.0023
GLN 5100.0020
LEU 5110.0014
SER 5120.0009
PRO 5130.0012
THR 5140.0009
ALA 5150.0008
PHE 5160.0017
ASN 5170.0021
SER 5180.0029
LEU 5190.0035
SER 5200.0041
SER 5210.0049
LEU 5220.0033
GLN 5230.0035
VAL 5240.0026
LEU 5250.0015
ASN 5260.0012
MET 5270.0011
SER 5280.0016
HIS 5290.0024
ASN 5300.0026
ASN 5310.0033
PHE 5320.0033
PHE 5330.0036
SER 5340.0036
LEU 5350.0032
ASP 5360.0037
THR 5370.0026
PHE 5380.0027
PRO 5390.0016
TYR 5400.0016
LYS 5410.0026
CYS 5420.0029
LEU 5430.0030
ASN 5440.0042
SER 5450.0043
LEU 5460.0031
GLN 5470.0025
VAL 5480.0015
LEU 5490.0010
ASP 5500.0014
TYR 5510.0022
SER 5520.0027
LEU 5530.0029
ASN 5540.0032
HIS 5550.0034
ILE 5560.0035
MET 5570.0034
THR 5580.0040
SER 5590.0046
LYS 5600.0052
LYS 5610.0059
GLN 5620.0059
GLU 5630.0049
LEU 5640.0043
GLN 5650.0049
HIS 5660.0041
PHE 5670.0028
PRO 5680.0032
SER 5690.0046
SER 5700.0041
LEU 5710.0027
ALA 5720.0018
PHE 5730.0023
LEU 5740.0026
ASN 5750.0032
LEU 5760.0035
THR 5770.0040
GLN 5780.0034
ASN 5790.0033
ASP 5800.0028
PHE 5810.0031
ALA 5820.0031
CYS 5830.0043
THR 5840.0050
CYS 5850.0065
GLU 5860.0054
HIS 5870.0040
GLN 5880.0052
SER 5890.0058
PHE 5900.0052
LEU 5910.0050
GLN 5920.0052
TRP 5930.0054
ILE 5940.0054
LYS 5950.0061
ASP 5960.0068
GLN 5970.0050
ARG 5980.0044
GLN 5990.0049
LEU 6000.0050
LEU 6010.0043
VAL 6020.0054
GLU 6030.0053
VAL 6040.0050
GLU 6050.0050
ARG 6060.0048
MET 6070.0041
GLU 6080.0030
CYS 6090.0025
ALA 6100.0023
THR 6110.0028
PRO 6120.0058
SER 6130.0065
ASP 6140.0075
LYS 6150.0052
GLN 6160.0035
GLY 6170.0026
MET 6180.0031
PRO 6190.0041
VAL 6200.0046
LEU 6210.0061
SER 6220.0072
LEU 6230.0062
ASN 6240.0079
ILE 6250.0082
THR 6260.0097
CYS 6270.0125
GLU 10.0106
ALA 20.0082
ALA 30.0048
ALA 40.0079
LYS 50.0082
MET 60.0048
GLN 70.0078
ARG 80.0087
LEU 90.0065
VAL 100.0084
LEU 110.0040
LEU 120.0041
LEU 130.0045
ALA 140.0054
ILE 150.0049
SER 160.0034
LEU 170.0055
LEU 180.0115
LEU 190.0100
TYR 200.0030
GLN 210.0101
ASP 220.0125
LEU 230.0089
PRO 240.0094
VAL 250.0061
ARG 260.0161
SER 270.0112
GLU 280.0131
PHE 290.0120
GLU 300.0077
LEU 310.0051
ASP 320.0044
ARG 330.0039
ILE 340.0028
CYS 350.0020
GLY 360.0016
TYR 370.0020
GLY 380.0024
THR 390.0028
ALA 400.0022
ARG 410.0032
CYS 420.0024
ARG 430.0042
LYS 440.0050
LYS 450.0068
CYS 460.0053
ARG 470.0057
SER 480.0057
GLN 490.0045
GLU 500.0040
TYR 510.0043
ARG 520.0039
ILE 530.0032
GLY 540.0031
ARG 550.0028
CYS 560.0017
PRO 570.0036
ASN 580.0019
THR 590.0036
TYR 600.0032
ALA 610.0037
CYS 620.0031
CYS 630.0033
LEU 640.0030
ARG 650.0034
LYS 660.0024
TRP 670.0035
ASP 680.0032
GLU 690.0040
SER 700.0040
LEU 710.0050
LEU 720.0057
ASN 730.0052
ARG 740.0041
THR 750.0047
LYS 760.0047
PRO 770.0041
GLU 780.0061
ALA 790.0088
ALA 800.0078
ALA 810.0113
LYS 820.0092
LYS 830.0084
GLU 840.0072
MET 850.0072
ASN 860.0074
LEU 870.0082
SER 880.0076
VAL 890.0086
GLY 900.0078
LEU 910.0093
GLY 920.0097
GLY 930.0099
GLY 940.0115
SER 950.0104
ASN 960.0092
LEU 970.0089
SER 980.0088
VAL 990.0086
GLY 1000.0085
LEU 1010.0089
GLY 1020.0089
GLU 1030.0123
ILE 1040.0112
GLY 1050.0144
GLY 1060.0102
GLY 1070.0090
SER 1080.0099
LYS 1090.0123
LEU 1100.0133
LEU 1110.0069
ASP 1120.0064
ILE 1130.0044
ASN 1140.0054
LEU 1150.0044
GLY 1160.0175
ARG 1170.0325
GLY 1180.0359
GLY 1190.0315
GLY 1200.0177
SER 1210.0084
MET 1220.0054
VAL 1230.0058
ASP 1240.0078
LEU 1250.0117
THR 1260.0112
PHE 1270.0068
GLY 1280.0041
GLY 1290.0049
VAL 1300.0053
GLY 1310.0120
GLY 1320.0152
GLY 1330.0154
SER 1340.0147
THR 1350.0130
PHE 1360.0114
THR 1370.0154
PHE 1380.0134
PHE 1390.0183
PRO 1400.0172
LEU 1410.0245
VAL 1420.0249
ILE 1430.0242
GLY 1440.0283
GLY 1450.0351
GLY 1460.0271
SER 1470.0193
ASP 1480.0164
ALA 1490.0177
MET 1500.0198
TYR 1510.0234
LEU 1520.0199
GLY 1530.0214
PHE 1540.0183
ALA 1550.0201
ALA 1560.0194
GLY 1570.0199
GLY 1580.0204
GLY 1590.0186
SER 1600.0163
ALA 1610.0130
GLY 1620.0126
GLY 1630.0099
GLU 1640.0077
ASN 1650.0094
HIS 1660.0118
VAL 1670.0124
ALA 1680.0125
PHE 1690.0133
GLY 1700.0141
PRO 1710.0338
GLY 1720.0341
PRO 1730.0327
GLY 1740.0118
VAL 1750.0160
ASP 1760.0183
LEU 1770.0147
THR 1780.0132
PHE 1790.0108
GLY 1800.0124
GLY 1810.0183
VAL 1820.0195
GLN 1830.0215
PHE 1840.0230
ALA 1850.0283
MET 1860.0287
VAL 1870.0226
ASN 1880.0099
ASN 1890.0216
GLY 1900.0181
PRO 1910.0701
GLY 1920.0280
PRO 1930.0252
GLY 1940.0435
GLU 1950.0116
SER 1960.0432
PHE 1970.0400
THR 1980.0353
ALA 1990.0291
GLN 2000.0304
PRO 2010.0149
ALA 2020.0220
ASP 2030.0340
MET 2040.0407
GLN 2050.0558
ALA 2060.0806
GLY 2070.0544
ILE 2080.0787
LYS 2090.0526
GLY 2100.1002
PRO 2110.0611
GLY 2120.0289
PRO 2130.0414
GLY 2140.0408
GLY 2150.0322
SER 2160.0544
ILE 2170.0305
GLN 2180.0246
VAL 2190.0198
ILE 2200.0185
ASN 2210.0252
GLY 2220.0223
SER 2230.0157
THR 2240.0149
ILE 2250.0144
GLY 2260.0253
THR 2270.0168
GLY 2280.0180
SER 2290.0169
LYS 2300.0211
LYS 2310.0158
THR 2320.0162
ILE 2330.0145
LEU 2340.0127
ILE 2350.0146
TYR 2360.0038
SER 2370.0033
ILE 2380.0091
ILE 2390.0115
GLY 2400.0174
VAL 2410.0105
LYS 2420.0087
LYS 2430.0079
GLY 2440.0092
THR 2450.0105
LEU 2460.0202
ALA 2470.0184
TRP 2480.0139
ALA 2490.0144
ARG 2500.0136
THR 2510.0103
GLY 2520.0076
PHE 2530.0111
SER 2540.0114
PRO 2550.0146
ALA 2560.0358
LYS 2570.0296
LYS 2580.0248
LEU 2590.0222
ASN 2600.0457
ALA 2610.0767
GLY 2620.0443
VAL 2630.0417
VAL 2640.0499
ARG 2650.0121
VAL 2660.0123
PHE 2670.0089
PHE 2680.0051
LEU 2690.0062
ASN 2700.0075
GLN 2710.0067
LYS 2720.0035
LYS 2730.0031
ALA 2740.0029
LYS 2750.0049
ASP 2760.0061
VAL 2770.0070
LEU 2780.0090
ARG 2790.0107
LYS 2800.0111
THR 2810.0060
SER 2820.0073
ARG 2830.0031
PRO 2840.0130
MET 2850.0166
VAL 2860.0075
ASP 2870.0051
LEU 2880.0043
THR 2890.0027
PHE 2900.0015
GLY 2910.0058
GLY 2920.0136

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.