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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0517
GLU 270.0162
PRO 280.0144
CYS 290.0066
VAL 300.0070
GLU 310.0133
VAL 320.0165
VAL 330.0212
PRO 340.0213
ASN 350.0167
ILE 360.0160
THR 370.0123
TYR 380.0052
GLN 390.0042
CYS 400.0069
MET 410.0117
GLU 420.0158
LEU 430.0151
ASN 440.0172
PHE 450.0144
TYR 460.0159
LYS 470.0166
ILE 480.0116
PRO 490.0078
ASP 500.0080
ASN 510.0081
LEU 520.0049
PRO 530.0057
PHE 540.0032
SER 550.0081
THR 560.0071
LYS 570.0112
ASN 580.0105
LEU 590.0080
ASP 600.0092
LEU 610.0111
SER 620.0141
PHE 630.0164
ASN 640.0153
PRO 650.0170
LEU 660.0149
ARG 670.0137
HIS 680.0116
LEU 690.0106
GLY 700.0097
SER 710.0099
TYR 720.0110
SER 730.0103
PHE 740.0093
PHE 750.0090
SER 760.0074
PHE 770.0073
PRO 780.0092
GLU 790.0092
LEU 800.0093
GLN 810.0110
VAL 820.0099
LEU 830.0097
ASP 840.0101
LEU 850.0114
SER 860.0128
ARG 870.0133
CYS 880.0129
GLU 890.0121
ILE 900.0117
GLN 910.0110
THR 920.0093
ILE 930.0090
GLU 940.0089
ASP 950.0094
GLY 960.0090
ALA 970.0101
TYR 980.0098
GLN 990.0108
SER 1000.0107
LEU 1010.0099
SER 1020.0104
HIS 1030.0099
LEU 1040.0085
SER 1050.0074
THR 1060.0064
LEU 1070.0068
ILE 1080.0072
LEU 1090.0075
THR 1100.0085
GLY 1110.0091
ASN 1120.0094
PRO 1130.0078
ILE 1140.0076
GLN 1150.0064
SER 1160.0065
LEU 1170.0070
ALA 1180.0076
LEU 1190.0067
GLY 1200.0063
ALA 1210.0058
PHE 1220.0051
SER 1230.0061
GLY 1240.0065
LEU 1250.0053
SER 1260.0057
SER 1270.0039
LEU 1280.0029
GLN 1290.0038
LYS 1300.0035
LEU 1310.0024
VAL 1320.0051
ALA 1330.0051
VAL 1340.0047
GLU 1350.0046
THR 1360.0050
ASN 1370.0079
LEU 1380.0086
ALA 1390.0094
SER 1400.0105
LEU 1410.0109
GLU 1420.0128
ASN 1430.0110
PHE 1440.0087
PRO 1450.0087
ILE 1460.0090
GLY 1470.0097
HIS 1480.0087
LEU 1490.0070
LYS 1500.0093
THR 1510.0085
LEU 1520.0072
LYS 1530.0068
GLU 1540.0058
LEU 1550.0054
ASN 1560.0043
VAL 1570.0075
ALA 1580.0059
HIS 1590.0054
ASN 1600.0069
LEU 1610.0078
ILE 1620.0109
GLN 1630.0104
SER 1640.0097
PHE 1650.0075
LYS 1660.0108
LEU 1670.0135
PRO 1680.0160
GLU 1690.0188
TYR 1700.0185
PHE 1710.0166
SER 1720.0191
ASN 1730.0179
LEU 1740.0155
THR 1750.0172
ASN 1760.0153
LEU 1770.0112
GLU 1780.0101
HIS 1790.0085
LEU 1800.0071
ASP 1810.0057
LEU 1820.0068
SER 1830.0050
SER 1840.0055
ASN 1850.0075
LYS 1860.0085
ILE 1870.0076
GLN 1880.0096
SER 1890.0082
ILE 1900.0041
TYR 1910.0054
CYS 1920.0010
THR 1930.0074
ASP 1940.0082
LEU 1950.0093
ARG 1960.0130
VAL 1970.0161
LEU 1980.0148
HIS 1990.0147
GLN 2000.0193
MET 2010.0207
PRO 2020.0181
LEU 2030.0206
LEU 2040.0175
ASN 2050.0161
LEU 2060.0117
SER 2070.0098
LEU 2080.0070
ASP 2090.0057
LEU 2100.0033
SER 2110.0024
LEU 2120.0030
ASN 2130.0046
PRO 2140.0086
MET 2150.0082
ASN 2160.0132
PHE 2170.0133
ILE 2180.0099
GLN 2190.0113
PRO 2200.0157
GLY 2210.0140
ALA 2220.0079
PHE 2230.0118
LYS 2240.0168
GLU 2250.0202
ILE 2260.0174
ARG 2270.0146
LEU 2280.0133
HIS 2290.0154
LYS 2300.0120
LEU 2310.0084
THR 2320.0084
LEU 2330.0054
ARG 2340.0038
ASN 2350.0023
ASN 2360.0038
PHE 2370.0092
ASP 2380.0126
SER 2390.0152
LEU 2400.0169
ASN 2410.0207
VAL 2420.0164
MET 2430.0142
LYS 2440.0188
THR 2450.0189
CYS 2460.0143
ILE 2470.0150
GLN 2480.0183
GLY 2490.0137
LEU 2500.0140
ALA 2510.0191
GLY 2520.0185
LEU 2530.0155
GLU 2540.0178
VAL 2550.0154
HIS 2560.0176
ARG 2570.0147
LEU 2580.0125
VAL 2590.0107
LEU 2600.0090
GLY 2610.0075
GLU 2620.0039
PHE 2630.0046
ARG 2640.0056
ASN 2650.0072
GLU 2660.0052
GLY 2670.0069
ASN 2680.0046
LEU 2690.0085
GLU 2700.0111
LYS 2710.0133
PHE 2720.0120
ASP 2730.0138
LYS 2740.0161
SER 2750.0179
ALA 2760.0162
LEU 2770.0153
GLU 2780.0194
GLY 2790.0171
LEU 2800.0170
CYS 2810.0219
ASN 2820.0189
LEU 2830.0173
THR 2840.0194
ILE 2850.0173
GLU 2860.0194
GLU 2870.0142
PHE 2880.0128
ARG 2890.0117
LEU 2900.0104
ALA 2910.0100
TYR 2920.0094
LEU 2930.0077
ASP 2940.0042
TYR 2950.0059
TYR 2960.0075
LEU 2970.0101
ASP 2980.0101
GLY 2990.0106
ILE 3000.0110
ILE 3010.0113
ASP 3020.0138
LEU 3030.0121
PHE 3040.0126
ASN 3050.0141
CYS 3060.0134
LEU 3070.0109
THR 3080.0109
ASN 3090.0125
VAL 3100.0125
SER 3110.0129
SER 3120.0099
PHE 3130.0098
SER 3140.0098
LEU 3150.0097
VAL 3160.0099
SER 3170.0100
VAL 3180.0100
THR 3190.0098
ILE 3200.0103
GLU 3210.0103
ARG 3220.0098
VAL 3230.0089
LYS 3240.0081
ASP 3250.0082
PHE 3260.0074
SER 3270.0046
TYR 3280.0053
ASN 3290.0046
PHE 3300.0056
GLY 3310.0051
TRP 3320.0047
GLN 3330.0034
HIS 3340.0041
LEU 3350.0051
GLU 3360.0062
LEU 3370.0069
VAL 3380.0077
ASN 3390.0088
CYS 3400.0086
LYS 3410.0088
PHE 3420.0097
GLY 3430.0100
GLN 3440.0082
PHE 3450.0067
PRO 3460.0063
THR 3470.0048
LEU 3480.0038
LYS 3490.0030
LEU 3500.0029
LYS 3510.0034
SER 3520.0044
LEU 3530.0025
LYS 3540.0033
ARG 3550.0026
LEU 3560.0024
THR 3570.0028
PHE 3580.0034
THR 3590.0045
SER 3600.0058
ASN 3610.0057
LYS 3620.0094
GLY 3630.0098
GLY 3640.0088
ASN 3650.0070
ALA 3660.0059
PHE 3670.0034
SER 3680.0030
GLU 3690.0034
VAL 3700.0032
ASP 3710.0037
LEU 3720.0033
PRO 3730.0053
SER 3740.0067
LEU 3750.0055
GLU 3760.0075
PHE 3770.0047
LEU 3780.0040
ASP 3790.0036
LEU 3800.0033
SER 3810.0040
ARG 3820.0033
ASN 3830.0032
GLY 3840.0036
LEU 3850.0031
SER 3860.0032
PHE 3870.0034
LYS 3880.0036
GLY 3890.0045
CYS 3900.0050
CYS 3910.0057
SER 3920.0066
GLN 3930.0064
SER 3940.0062
ASP 3950.0054
PHE 3960.0049
GLY 3970.0063
THR 3980.0073
ILE 3990.0087
SER 4000.0089
LEU 4010.0079
LYS 4020.0074
TYR 4030.0062
LEU 4040.0055
ASP 4050.0046
LEU 4060.0042
SER 4070.0023
PHE 4080.0022
ASN 4090.0020
GLY 4100.0015
VAL 4110.0014
ILE 4120.0033
THR 4130.0039
MET 4140.0049
SER 4150.0056
SER 4160.0064
ASN 4170.0069
PHE 4180.0071
LEU 4190.0066
GLY 4200.0067
LEU 4210.0071
GLU 4220.0077
GLN 4230.0076
LEU 4240.0073
GLU 4250.0072
HIS 4260.0068
LEU 4270.0050
ASP 4280.0044
PHE 4290.0038
GLN 4300.0035
HIS 4310.0029
SER 4320.0027
ASN 4330.0031
LEU 4340.0038
LYS 4350.0045
GLN 4360.0052
MET 4370.0069
SER 4380.0067
GLU 4390.0064
PHE 4400.0064
SER 4410.0066
VAL 4420.0071
PHE 4430.0074
LEU 4440.0068
SER 4450.0068
LEU 4460.0075
ARG 4470.0072
ASN 4480.0073
LEU 4490.0072
ILE 4500.0073
TYR 4510.0072
LEU 4520.0058
ASP 4530.0051
ILE 4540.0048
SER 4550.0043
HIS 4560.0041
THR 4570.0058
HIS 4580.0064
THR 4590.0062
ARG 4600.0067
VAL 4610.0064
ALA 4620.0087
PHE 4630.0085
ASN 4640.0087
GLY 4650.0085
ILE 4660.0087
PHE 4670.0090
ASN 4680.0088
GLY 4690.0088
LEU 4700.0091
SER 4710.0092
SER 4720.0090
LEU 4730.0084
GLU 4740.0083
VAL 4750.0078
LEU 4760.0073
LYS 4770.0058
MET 4780.0058
ALA 4790.0054
GLY 4800.0056
ASN 4810.0059
SER 4820.0073
PHE 4830.0075
GLN 4840.0082
GLU 4850.0070
ASN 4860.0059
PHE 4870.0061
LEU 4880.0067
PRO 4890.0081
ASP 4900.0091
ILE 4910.0098
PHE 4920.0094
THR 4930.0099
GLU 4940.0106
LEU 4950.0101
ARG 4960.0102
ASN 4970.0097
LEU 4980.0085
THR 4990.0075
PHE 5000.0069
LEU 5010.0067
ASP 5020.0054
LEU 5030.0049
SER 5040.0044
GLN 5050.0050
CYS 5060.0050
GLN 5070.0050
LEU 5080.0034
GLU 5090.0016
GLN 5100.0026
LEU 5110.0034
SER 5120.0061
PRO 5130.0061
THR 5140.0078
ALA 5150.0072
PHE 5160.0069
ASN 5170.0089
SER 5180.0100
LEU 5190.0087
SER 5200.0085
SER 5210.0081
LEU 5220.0063
GLN 5230.0044
VAL 5240.0040
LEU 5250.0035
ASN 5260.0038
MET 5270.0018
SER 5280.0036
HIS 5290.0051
ASN 5300.0038
ASN 5310.0041
PHE 5320.0060
PHE 5330.0070
SER 5340.0066
LEU 5350.0059
ASP 5360.0049
THR 5370.0023
PHE 5380.0026
PRO 5390.0019
TYR 5400.0018
LYS 5410.0039
CYS 5420.0072
LEU 5430.0053
ASN 5440.0062
SER 5450.0047
LEU 5460.0024
GLN 5470.0012
VAL 5480.0026
LEU 5490.0027
ASP 5500.0044
TYR 5510.0049
SER 5520.0069
LEU 5530.0074
ASN 5540.0070
HIS 5550.0077
ILE 5560.0075
MET 5570.0091
THR 5580.0088
SER 5590.0082
LYS 5600.0092
LYS 5610.0088
GLN 5620.0078
GLU 5630.0044
LEU 5640.0054
GLN 5650.0050
HIS 5660.0026
PHE 5670.0039
PRO 5680.0046
SER 5690.0070
SER 5700.0043
LEU 5710.0030
ALA 5720.0074
PHE 5730.0076
LEU 5740.0076
ASN 5750.0078
LEU 5760.0081
THR 5770.0075
GLN 5780.0074
ASN 5790.0074
ASP 5800.0071
PHE 5810.0070
ALA 5820.0063
CYS 5830.0056
THR 5840.0106
CYS 5850.0172
GLU 5860.0184
HIS 5870.0112
GLN 5880.0112
SER 5890.0131
PHE 5900.0107
LEU 5910.0067
GLN 5920.0081
TRP 5930.0093
ILE 5940.0065
LYS 5950.0058
ASP 5960.0088
GLN 5970.0085
ARG 5980.0069
GLN 5990.0081
LEU 6000.0093
LEU 6010.0080
VAL 6020.0086
GLU 6030.0068
VAL 6040.0054
GLU 6050.0038
ARG 6060.0048
MET 6070.0051
GLU 6080.0043
CYS 6090.0031
ALA 6100.0063
THR 6110.0046
PRO 6120.0084
SER 6130.0169
ASP 6140.0215
LYS 6150.0146
GLN 6160.0139
GLY 6170.0106
MET 6180.0081
PRO 6190.0043
VAL 6200.0030
LEU 6210.0056
SER 6220.0105
LEU 6230.0099
ASN 6240.0135
ILE 6250.0149
THR 6260.0191
CYS 6270.0257
GLU 10.0173
ALA 20.0110
ALA 30.0053
ALA 40.0123
LYS 50.0080
MET 60.0069
GLN 70.0117
ARG 80.0129
LEU 90.0108
VAL 100.0153
LEU 110.0064
LEU 120.0098
LEU 130.0089
ALA 140.0065
ILE 150.0069
SER 160.0033
LEU 170.0137
LEU 180.0222
LEU 190.0167
TYR 200.0056
GLN 210.0213
ASP 220.0251
LEU 230.0175
PRO 240.0201
VAL 250.0134
ARG 260.0517
SER 270.0330
GLU 280.0466
PHE 290.0429
GLU 300.0202
LEU 310.0143
ASP 320.0153
ARG 330.0095
ILE 340.0067
CYS 350.0108
GLY 360.0058
TYR 370.0048
GLY 380.0048
THR 390.0050
ALA 400.0062
ARG 410.0022
CYS 420.0017
ARG 430.0085
LYS 440.0132
LYS 450.0201
CYS 460.0140
ARG 470.0129
SER 480.0147
GLN 490.0088
GLU 500.0095
TYR 510.0167
ARG 520.0171
ILE 530.0189
GLY 540.0195
ARG 550.0173
CYS 560.0154
PRO 570.0209
ASN 580.0139
THR 590.0138
TYR 600.0077
ALA 610.0100
CYS 620.0084
CYS 630.0070
LEU 640.0070
ARG 650.0049
LYS 660.0085
TRP 670.0081
ASP 680.0058
GLU 690.0042
SER 700.0037
LEU 710.0070
LEU 720.0080
ASN 730.0071
ARG 740.0067
THR 750.0080
LYS 760.0090
PRO 770.0118
GLU 780.0106
ALA 790.0141
ALA 800.0172
ALA 810.0279
LYS 820.0210
LYS 830.0181
GLU 840.0142
MET 850.0114
ASN 860.0123
LEU 870.0091
SER 880.0093
VAL 890.0076
GLY 900.0072
LEU 910.0059
GLY 920.0091
GLY 930.0102
GLY 940.0127
SER 950.0099
ASN 960.0109
LEU 970.0109
SER 980.0128
VAL 990.0128
GLY 1000.0153
LEU 1010.0133
GLY 1020.0143
GLU 1030.0130
ILE 1040.0115
GLY 1050.0143
GLY 1060.0155
GLY 1070.0137
SER 1080.0109
LYS 1090.0113
LEU 1100.0122
LEU 1110.0060
ASP 1120.0041
ILE 1130.0021
ASN 1140.0012
LEU 1150.0017
GLY 1160.0111
ARG 1170.0144
GLY 1180.0114
GLY 1190.0145
GLY 1200.0144
SER 1210.0043
MET 1220.0038
VAL 1230.0032
ASP 1240.0031
LEU 1250.0028
THR 1260.0021
PHE 1270.0034
GLY 1280.0059
GLY 1290.0083
VAL 1300.0097
GLY 1310.0200
GLY 1320.0164
GLY 1330.0115
SER 1340.0100
THR 1350.0054
PHE 1360.0052
THR 1370.0029
PHE 1380.0019
PHE 1390.0008
PRO 1400.0015
LEU 1410.0057
VAL 1420.0110
ILE 1430.0138
GLY 1440.0198
GLY 1450.0244
GLY 1460.0165
SER 1470.0133
ASP 1480.0082
ALA 1490.0092
MET 1500.0064
TYR 1510.0065
LEU 1520.0052
GLY 1530.0051
PHE 1540.0047
ALA 1550.0040
ALA 1560.0089
GLY 1570.0054
GLY 1580.0034
GLY 1590.0018
SER 1600.0060
ALA 1610.0157
GLY 1620.0136
GLY 1630.0105
GLU 1640.0080
ASN 1650.0074
HIS 1660.0059
VAL 1670.0054
ALA 1680.0053
PHE 1690.0048
GLY 1700.0049
PRO 1710.0106
GLY 1720.0092
PRO 1730.0089
GLY 1740.0066
VAL 1750.0078
ASP 1760.0096
LEU 1770.0088
THR 1780.0106
PHE 1790.0109
GLY 1800.0133
GLY 1810.0160
VAL 1820.0145
GLN 1830.0137
PHE 1840.0116
ALA 1850.0128
MET 1860.0090
VAL 1870.0117
ASN 1880.0098
ASN 1890.0111
GLY 1900.0095
PRO 1910.0198
GLY 1920.0092
PRO 1930.0160
GLY 1940.0149
GLU 1950.0078
SER 1960.0399
PHE 1970.0305
THR 1980.0261
ALA 1990.0244
GLN 2000.0143
PRO 2010.0190
ALA 2020.0123
ASP 2030.0165
MET 2040.0267
GLN 2050.0307
ALA 2060.0438
GLY 2070.0340
ILE 2080.0409
LYS 2090.0240
GLY 2100.0401
PRO 2110.0298
GLY 2120.0233
PRO 2130.0150
GLY 2140.0174
GLY 2150.0128
SER 2160.0392
ILE 2170.0312
GLN 2180.0208
VAL 2190.0111
ILE 2200.0164
ASN 2210.0286
GLY 2220.0248
SER 2230.0133
THR 2240.0028
ILE 2250.0052
GLY 2260.0163
THR 2270.0175
GLY 2280.0113
SER 2290.0143
LYS 2300.0140
LYS 2310.0189
THR 2320.0216
ILE 2330.0148
LEU 2340.0137
ILE 2350.0132
TYR 2360.0046
SER 2370.0080
ILE 2380.0122
ILE 2390.0161
GLY 2400.0210
VAL 2410.0151
LYS 2420.0136
LYS 2430.0123
GLY 2440.0123
THR 2450.0136
LEU 2460.0186
ALA 2470.0187
TRP 2480.0124
ALA 2490.0120
ARG 2500.0078
THR 2510.0123
GLY 2520.0117
PHE 2530.0090
SER 2540.0083
PRO 2550.0080
ALA 2560.0099
LYS 2570.0108
LYS 2580.0115
LEU 2590.0111
ASN 2600.0150
ALA 2610.0090
GLY 2620.0048
VAL 2630.0098
VAL 2640.0202
ARG 2650.0124
VAL 2660.0119
PHE 2670.0082
PHE 2680.0060
LEU 2690.0036
ASN 2700.0039
GLN 2710.0030
LYS 2720.0022
LYS 2730.0023
ALA 2740.0022
LYS 2750.0015
ASP 2760.0023
VAL 2770.0021
LEU 2780.0021
ARG 2790.0024
LYS 2800.0022
THR 2810.0021
SER 2820.0027
ARG 2830.0017
PRO 2840.0021
MET 2850.0017
VAL 2860.0030
ASP 2870.0023
LEU 2880.0029
THR 2890.0031
PHE 2900.0027
GLY 2910.0039
GLY 2920.0045

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.