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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0892
GLU 270.0062
PRO 280.0048
CYS 290.0028
VAL 300.0055
GLU 310.0080
VAL 320.0101
VAL 330.0112
PRO 340.0106
ASN 350.0077
ILE 360.0078
THR 370.0069
TYR 380.0041
GLN 390.0033
CYS 400.0015
MET 410.0037
GLU 420.0047
LEU 430.0041
ASN 440.0050
PHE 450.0042
TYR 460.0048
LYS 470.0054
ILE 480.0038
PRO 490.0018
ASP 500.0025
ASN 510.0028
LEU 520.0021
PRO 530.0025
PHE 540.0012
SER 550.0033
THR 560.0035
LYS 570.0051
ASN 580.0050
LEU 590.0037
ASP 600.0039
LEU 610.0039
SER 620.0047
PHE 630.0053
ASN 640.0050
PRO 650.0054
LEU 660.0048
ARG 670.0041
HIS 680.0036
LEU 690.0036
GLY 700.0038
SER 710.0041
TYR 720.0042
SER 730.0039
PHE 740.0038
PHE 750.0039
SER 760.0035
PHE 770.0034
PRO 780.0042
GLU 790.0042
LEU 800.0041
GLN 810.0047
VAL 820.0040
LEU 830.0037
ASP 840.0035
LEU 850.0037
SER 860.0039
ARG 870.0043
CYS 880.0042
GLU 890.0036
ILE 900.0032
GLN 910.0027
THR 920.0026
ILE 930.0026
GLU 940.0031
ASP 950.0032
GLY 960.0033
ALA 970.0036
TYR 980.0036
GLN 990.0041
SER 1000.0044
LEU 1010.0040
SER 1020.0041
HIS 1030.0041
LEU 1040.0033
SER 1050.0027
THR 1060.0022
LEU 1070.0018
ILE 1080.0021
LEU 1090.0019
THR 1100.0028
GLY 1110.0031
ASN 1120.0028
PRO 1130.0021
ILE 1140.0018
GLN 1150.0021
SER 1160.0021
LEU 1170.0023
ALA 1180.0028
LEU 1190.0028
GLY 1200.0020
ALA 1210.0016
PHE 1220.0015
SER 1230.0019
GLY 1240.0021
LEU 1250.0018
SER 1260.0019
SER 1270.0013
LEU 1280.0012
GLN 1290.0024
LYS 1300.0024
LEU 1310.0017
VAL 1320.0030
ALA 1330.0031
VAL 1340.0039
GLU 1350.0042
THR 1360.0036
ASN 1370.0041
LEU 1380.0041
ALA 1390.0042
SER 1400.0042
LEU 1410.0042
GLU 1420.0040
ASN 1430.0036
PHE 1440.0035
PRO 1450.0036
ILE 1460.0038
GLY 1470.0036
HIS 1480.0034
LEU 1490.0032
LYS 1500.0038
THR 1510.0038
LEU 1520.0040
LYS 1530.0041
GLU 1540.0038
LEU 1550.0036
ASN 1560.0033
VAL 1570.0044
ALA 1580.0047
HIS 1590.0055
ASN 1600.0052
LEU 1610.0050
ILE 1620.0043
GLN 1630.0037
SER 1640.0032
PHE 1650.0022
LYS 1660.0028
LEU 1670.0038
PRO 1680.0046
GLU 1690.0052
TYR 1700.0057
PHE 1710.0051
SER 1720.0056
ASN 1730.0056
LEU 1740.0053
THR 1750.0056
ASN 1760.0054
LEU 1770.0045
GLU 1780.0041
HIS 1790.0039
LEU 1800.0034
ASP 1810.0032
LEU 1820.0031
SER 1830.0030
SER 1840.0034
ASN 1850.0034
LYS 1860.0034
ILE 1870.0020
GLN 1880.0023
SER 1890.0027
ILE 1900.0020
TYR 1910.0032
CYS 1920.0027
THR 1930.0031
ASP 1940.0023
LEU 1950.0009
ARG 1960.0019
VAL 1970.0033
LEU 1980.0025
HIS 1990.0015
GLN 2000.0030
MET 2010.0040
PRO 2020.0027
LEU 2030.0040
LEU 2040.0039
ASN 2050.0041
LEU 2060.0033
SER 2070.0035
LEU 2080.0027
ASP 2090.0029
LEU 2100.0020
SER 2110.0026
LEU 2120.0017
ASN 2130.0007
PRO 2140.0010
MET 2150.0016
ASN 2160.0031
PHE 2170.0038
ILE 2180.0035
GLN 2190.0047
PRO 2200.0062
GLY 2210.0056
ALA 2220.0034
PHE 2230.0039
LYS 2240.0054
GLU 2250.0055
ILE 2260.0046
ARG 2270.0041
LEU 2280.0041
HIS 2290.0048
LYS 2300.0045
LEU 2310.0039
THR 2320.0045
LEU 2330.0038
ARG 2340.0038
ASN 2350.0031
ASN 2360.0027
PHE 2370.0032
ASP 2380.0028
SER 2390.0034
LEU 2400.0042
ASN 2410.0044
VAL 2420.0042
MET 2430.0046
LYS 2440.0055
THR 2450.0053
CYS 2460.0048
ILE 2470.0055
GLN 2480.0061
GLY 2490.0050
LEU 2500.0052
ALA 2510.0064
GLY 2520.0056
LEU 2530.0051
GLU 2540.0058
VAL 2550.0055
HIS 2560.0062
ARG 2570.0058
LEU 2580.0055
VAL 2590.0053
LEU 2600.0051
GLY 2610.0048
GLU 2620.0035
PHE 2630.0031
ARG 2640.0033
ASN 2650.0023
GLU 2660.0022
GLY 2670.0031
ASN 2680.0033
LEU 2690.0034
GLU 2700.0033
LYS 2710.0035
PHE 2720.0043
ASP 2730.0044
LYS 2740.0047
SER 2750.0050
ALA 2760.0049
LEU 2770.0054
GLU 2780.0061
GLY 2790.0058
LEU 2800.0062
CYS 2810.0071
ASN 2820.0061
LEU 2830.0059
THR 2840.0065
ILE 2850.0063
GLU 2860.0069
GLU 2870.0054
PHE 2880.0053
ARG 2890.0053
LEU 2900.0052
ALA 2910.0052
TYR 2920.0049
LEU 2930.0044
ASP 2940.0034
TYR 2950.0036
TYR 2960.0029
LEU 2970.0033
ASP 2980.0031
GLY 2990.0031
ILE 3000.0034
ILE 3010.0033
ASP 3020.0043
LEU 3030.0044
PHE 3040.0047
ASN 3050.0048
CYS 3060.0051
LEU 3070.0046
THR 3080.0040
ASN 3090.0044
VAL 3100.0048
SER 3110.0047
SER 3120.0039
PHE 3130.0040
SER 3140.0042
LEU 3150.0043
VAL 3160.0046
SER 3170.0039
VAL 3180.0035
THR 3190.0028
ILE 3200.0026
GLU 3210.0021
ARG 3220.0020
VAL 3230.0020
LYS 3240.0020
ASP 3250.0020
PHE 3260.0023
SER 3270.0017
TYR 3280.0020
ASN 3290.0019
PHE 3300.0026
GLY 3310.0026
TRP 3320.0028
GLN 3330.0025
HIS 3340.0026
LEU 3350.0028
GLU 3360.0030
LEU 3370.0029
VAL 3380.0035
ASN 3390.0034
CYS 3400.0025
LYS 3410.0018
PHE 3420.0014
GLY 3430.0012
GLN 3440.0015
PHE 3450.0020
PRO 3460.0017
THR 3470.0020
LEU 3480.0019
LYS 3490.0016
LEU 3500.0017
LYS 3510.0014
SER 3520.0018
LEU 3530.0017
LYS 3540.0014
ARG 3550.0014
LEU 3560.0017
THR 3570.0022
PHE 3580.0021
THR 3590.0026
SER 3600.0029
ASN 3610.0024
LYS 3620.0023
GLY 3630.0014
GLY 3640.0017
ASN 3650.0027
ALA 3660.0035
PHE 3670.0026
SER 3680.0024
GLU 3690.0019
VAL 3700.0016
ASP 3710.0012
LEU 3720.0012
PRO 3730.0007
SER 3740.0006
LEU 3750.0006
GLU 3760.0009
PHE 3770.0006
LEU 3780.0011
ASP 3790.0016
LEU 3800.0020
SER 3810.0024
ARG 3820.0033
ASN 3830.0031
GLY 3840.0034
LEU 3850.0033
SER 3860.0035
PHE 3870.0027
LYS 3880.0031
GLY 3890.0026
CYS 3900.0017
CYS 3910.0013
SER 3920.0022
GLN 3930.0021
SER 3940.0027
ASP 3950.0022
PHE 3960.0013
GLY 3970.0021
THR 3980.0017
ILE 3990.0023
SER 4000.0019
LEU 4010.0014
LYS 4020.0017
TYR 4030.0009
LEU 4040.0006
ASP 4050.0012
LEU 4060.0019
SER 4070.0029
PHE 4080.0034
ASN 4090.0034
GLY 4100.0037
VAL 4110.0036
ILE 4120.0027
THR 4130.0027
MET 4140.0020
SER 4150.0029
SER 4160.0028
ASN 4170.0026
PHE 4180.0026
LEU 4190.0035
GLY 4200.0036
LEU 4210.0027
GLU 4220.0037
GLN 4230.0034
LEU 4240.0026
GLU 4250.0029
HIS 4260.0022
LEU 4270.0010
ASP 4280.0010
PHE 4290.0014
GLN 4300.0020
HIS 4310.0028
SER 4320.0029
ASN 4330.0029
LEU 4340.0022
LYS 4350.0023
GLN 4360.0020
MET 4370.0018
SER 4380.0017
GLU 4390.0019
PHE 4400.0023
SER 4410.0026
VAL 4420.0023
PHE 4430.0025
LEU 4440.0032
SER 4450.0036
LEU 4460.0033
ARG 4470.0042
ASN 4480.0042
LEU 4490.0035
ILE 4500.0037
TYR 4510.0031
LEU 4520.0024
ASP 4530.0022
ILE 4540.0019
SER 4550.0023
HIS 4560.0024
THR 4570.0032
HIS 4580.0036
THR 4590.0029
ARG 4600.0033
VAL 4610.0031
ALA 4620.0037
PHE 4630.0032
ASN 4640.0035
GLY 4650.0031
ILE 4660.0028
PHE 4670.0032
ASN 4680.0032
GLY 4690.0032
LEU 4700.0033
SER 4710.0036
SER 4720.0035
LEU 4730.0034
GLU 4740.0034
VAL 4750.0032
LEU 4760.0032
LYS 4770.0029
MET 4780.0030
ALA 4790.0033
GLY 4800.0036
ASN 4810.0036
SER 4820.0051
PHE 4830.0052
GLN 4840.0060
GLU 4850.0069
ASN 4860.0063
PHE 4870.0058
LEU 4880.0049
PRO 4890.0050
ASP 4900.0045
ILE 4910.0041
PHE 4920.0032
THR 4930.0033
GLU 4940.0029
LEU 4950.0027
ARG 4960.0026
ASN 4970.0022
LEU 4980.0022
THR 4990.0024
PHE 5000.0025
LEU 5010.0025
ASP 5020.0025
LEU 5030.0029
SER 5040.0031
GLN 5050.0038
CYS 5060.0039
GLN 5070.0051
LEU 5080.0043
GLU 5090.0048
GLN 5100.0048
LEU 5110.0041
SER 5120.0051
PRO 5130.0048
THR 5140.0047
ALA 5150.0039
PHE 5160.0029
ASN 5170.0037
SER 5180.0034
LEU 5190.0023
SER 5200.0028
SER 5210.0025
LEU 5220.0016
GLN 5230.0025
VAL 5240.0021
LEU 5250.0012
ASN 5260.0018
MET 5270.0014
SER 5280.0021
HIS 5290.0029
ASN 5300.0028
ASN 5310.0030
PHE 5320.0009
PHE 5330.0004
SER 5340.0005
LEU 5350.0010
ASP 5360.0011
THR 5370.0015
PHE 5380.0024
PRO 5390.0023
TYR 5400.0020
LYS 5410.0031
CYS 5420.0037
LEU 5430.0028
ASN 5440.0039
SER 5450.0035
LEU 5460.0029
GLN 5470.0037
VAL 5480.0032
LEU 5490.0022
ASP 5500.0021
TYR 5510.0014
SER 5520.0019
LEU 5530.0021
ASN 5540.0015
HIS 5550.0015
ILE 5560.0017
MET 5570.0022
THR 5580.0022
SER 5590.0023
LYS 5600.0024
LYS 5610.0026
GLN 5620.0018
GLU 5630.0015
LEU 5640.0019
GLN 5650.0024
HIS 5660.0025
PHE 5670.0028
PRO 5680.0035
SER 5690.0047
SER 5700.0044
LEU 5710.0038
ALA 5720.0035
PHE 5730.0032
LEU 5740.0027
ASN 5750.0027
LEU 5760.0021
THR 5770.0021
GLN 5780.0021
ASN 5790.0026
ASP 5800.0032
PHE 5810.0036
ALA 5820.0052
CYS 5830.0026
THR 5840.0037
CYS 5850.0052
GLU 5860.0075
HIS 5870.0048
GLN 5880.0045
SER 5890.0052
PHE 5900.0037
LEU 5910.0024
GLN 5920.0032
TRP 5930.0031
ILE 5940.0018
LYS 5950.0026
ASP 5960.0033
GLN 5970.0021
ARG 5980.0016
GLN 5990.0016
LEU 6000.0020
LEU 6010.0018
VAL 6020.0016
GLU 6030.0010
VAL 6040.0006
GLU 6050.0012
ARG 6060.0019
MET 6070.0022
GLU 6080.0040
CYS 6090.0048
ALA 6100.0072
THR 6110.0081
PRO 6120.0091
SER 6130.0130
ASP 6140.0120
LYS 6150.0085
GLN 6160.0103
GLY 6170.0086
MET 6180.0067
PRO 6190.0047
VAL 6200.0023
LEU 6210.0026
SER 6220.0062
LEU 6230.0036
ASN 6240.0044
ILE 6250.0052
THR 6260.0069
CYS 6270.0082
GLU 10.0062
ALA 20.0044
ALA 30.0038
ALA 40.0041
LYS 50.0015
MET 60.0029
GLN 70.0035
ARG 80.0043
LEU 90.0041
VAL 100.0039
LEU 110.0025
LEU 120.0029
LEU 130.0025
ALA 140.0005
ILE 150.0003
SER 160.0023
LEU 170.0035
LEU 180.0031
LEU 190.0021
TYR 200.0035
GLN 210.0043
ASP 220.0036
LEU 230.0031
PRO 240.0036
VAL 250.0032
ARG 260.0165
SER 270.0105
GLU 280.0134
PHE 290.0125
GLU 300.0067
LEU 310.0040
ASP 320.0040
ARG 330.0027
ILE 340.0022
CYS 350.0031
GLY 360.0019
TYR 370.0018
GLY 380.0018
THR 390.0017
ALA 400.0019
ARG 410.0019
CYS 420.0039
ARG 430.0051
LYS 440.0073
LYS 450.0072
CYS 460.0042
ARG 470.0042
SER 480.0050
GLN 490.0039
GLU 500.0031
TYR 510.0035
ARG 520.0030
ILE 530.0014
GLY 540.0035
ARG 550.0059
CYS 560.0075
PRO 570.0098
ASN 580.0104
THR 590.0101
TYR 600.0084
ALA 610.0045
CYS 620.0030
CYS 630.0018
LEU 640.0005
ARG 650.0017
LYS 660.0058
TRP 670.0057
ASP 680.0052
GLU 690.0056
SER 700.0050
LEU 710.0058
LEU 720.0062
ASN 730.0063
ARG 740.0038
THR 750.0029
LYS 760.0129
PRO 770.0193
GLU 780.0239
ALA 790.0346
ALA 800.0339
ALA 810.0310
LYS 820.0223
LYS 830.0202
GLU 840.0123
MET 850.0139
ASN 860.0202
LEU 870.0201
SER 880.0201
VAL 890.0202
GLY 900.0207
LEU 910.0165
GLY 920.0263
GLY 930.0377
GLY 940.0342
SER 950.0239
ASN 960.0203
LEU 970.0189
SER 980.0187
VAL 990.0192
GLY 1000.0191
LEU 1010.0111
GLY 1020.0175
GLU 1030.0318
ILE 1040.0363
GLY 1050.0474
GLY 1060.0213
GLY 1070.0283
SER 1080.0366
LYS 1090.0361
LEU 1100.0452
LEU 1110.0346
ASP 1120.0317
ILE 1130.0249
ASN 1140.0237
LEU 1150.0197
GLY 1160.0085
ARG 1170.0333
GLY 1180.0248
GLY 1190.0197
GLY 1200.0073
SER 1210.0134
MET 1220.0079
VAL 1230.0114
ASP 1240.0081
LEU 1250.0096
THR 1260.0072
PHE 1270.0038
GLY 1280.0029
GLY 1290.0028
VAL 1300.0047
GLY 1310.0144
GLY 1320.0119
GLY 1330.0151
SER 1340.0127
THR 1350.0159
PHE 1360.0118
THR 1370.0141
PHE 1380.0136
PHE 1390.0163
PRO 1400.0160
LEU 1410.0211
VAL 1420.0257
ILE 1430.0234
GLY 1440.0278
GLY 1450.0274
GLY 1460.0336
SER 1470.0361
ASP 1480.0322
ALA 1490.0252
MET 1500.0136
TYR 1510.0176
LEU 1520.0147
GLY 1530.0166
PHE 1540.0145
ALA 1550.0180
ALA 1560.0165
GLY 1570.0195
GLY 1580.0181
GLY 1590.0210
SER 1600.0239
ALA 1610.0229
GLY 1620.0167
GLY 1630.0094
GLU 1640.0046
ASN 1650.0114
HIS 1660.0096
VAL 1670.0101
ALA 1680.0117
PHE 1690.0127
GLY 1700.0175
PRO 1710.0364
GLY 1720.0287
PRO 1730.0333
GLY 1740.0238
VAL 1750.0254
ASP 1760.0266
LEU 1770.0115
THR 1780.0210
PHE 1790.0247
GLY 1800.0422
GLY 1810.0747
VAL 1820.0542
GLN 1830.0311
PHE 1840.0066
ALA 1850.0253
MET 1860.0705
VAL 1870.0892
ASN 1880.0539
ASN 1890.0406
GLY 1900.0604
PRO 1910.0468
GLY 1920.0502
PRO 1930.0419
GLY 1940.0260
GLU 1950.0072
SER 1960.0385
PHE 1970.0297
THR 1980.0206
ALA 1990.0205
GLN 2000.0076
PRO 2010.0279
ALA 2020.0108
ASP 2030.0183
MET 2040.0342
GLN 2050.0233
ALA 2060.0497
GLY 2070.0363
ILE 2080.0323
LYS 2090.0146
GLY 2100.0126
PRO 2110.0318
GLY 2120.0309
PRO 2130.0108
GLY 2140.0248
GLY 2150.0298
SER 2160.0215
ILE 2170.0206
GLN 2180.0044
VAL 2190.0077
ILE 2200.0195
ASN 2210.0463
GLY 2220.0425
SER 2230.0313
THR 2240.0171
ILE 2250.0181
GLY 2260.0066
THR 2270.0048
GLY 2280.0036
SER 2290.0058
LYS 2300.0088
LYS 2310.0186
THR 2320.0231
ILE 2330.0157
LEU 2340.0138
ILE 2350.0218
TYR 2360.0130
SER 2370.0113
ILE 2380.0098
ILE 2390.0044
GLY 2400.0101
VAL 2410.0070
LYS 2420.0063
LYS 2430.0076
GLY 2440.0108
THR 2450.0110
LEU 2460.0182
ALA 2470.0128
TRP 2480.0065
ALA 2490.0068
ARG 2500.0091
THR 2510.0076
GLY 2520.0031
PHE 2530.0064
SER 2540.0108
PRO 2550.0154
ALA 2560.0224
LYS 2570.0182
LYS 2580.0183
LEU 2590.0167
ASN 2600.0154
ALA 2610.0146
GLY 2620.0044
VAL 2630.0072
VAL 2640.0152
ARG 2650.0121
VAL 2660.0163
PHE 2670.0101
PHE 2680.0075
LEU 2690.0038
ASN 2700.0035
GLN 2710.0051
LYS 2720.0047
LYS 2730.0047
ALA 2740.0058
LYS 2750.0071
ASP 2760.0080
VAL 2770.0092
LEU 2780.0087
ARG 2790.0073
LYS 2800.0078
THR 2810.0118
SER 2820.0061
ARG 2830.0067
PRO 2840.0048
MET 2850.0047
VAL 2860.0028
ASP 2870.0034
LEU 2880.0023
THR 2890.0026
PHE 2900.0022
GLY 2910.0037
GLY 2920.0035

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.