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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0499
GLU 270.0059
PRO 280.0040
CYS 290.0042
VAL 300.0076
GLU 310.0108
VAL 320.0151
VAL 330.0172
PRO 340.0166
ASN 350.0147
ILE 360.0141
THR 370.0118
TYR 380.0077
GLN 390.0070
CYS 400.0046
MET 410.0083
GLU 420.0101
LEU 430.0103
ASN 440.0105
PHE 450.0079
TYR 460.0089
LYS 470.0057
ILE 480.0038
PRO 490.0037
ASP 500.0053
ASN 510.0056
LEU 520.0058
PRO 530.0078
PHE 540.0071
SER 550.0087
THR 560.0078
LYS 570.0080
ASN 580.0070
LEU 590.0050
ASP 600.0049
LEU 610.0042
SER 620.0053
PHE 630.0063
ASN 640.0057
PRO 650.0054
LEU 660.0047
ARG 670.0044
HIS 680.0052
LEU 690.0046
GLY 700.0062
SER 710.0062
TYR 720.0043
SER 730.0029
PHE 740.0036
PHE 750.0044
SER 760.0043
PHE 770.0031
PRO 780.0030
GLU 790.0038
LEU 800.0043
GLN 810.0051
VAL 820.0036
LEU 830.0028
ASP 840.0013
LEU 850.0016
SER 860.0030
ARG 870.0039
CYS 880.0023
GLU 890.0034
ILE 900.0043
GLN 910.0070
THR 920.0069
ILE 930.0051
GLU 940.0065
ASP 950.0062
GLY 960.0052
ALA 970.0031
TYR 980.0028
GLN 990.0043
SER 1000.0047
LEU 1010.0040
SER 1020.0044
HIS 1030.0046
LEU 1040.0038
SER 1050.0037
THR 1060.0032
LEU 1070.0014
ILE 1080.0034
LEU 1090.0042
THR 1100.0070
GLY 1110.0088
ASN 1120.0068
PRO 1130.0091
ILE 1140.0090
GLN 1150.0118
SER 1160.0112
LEU 1170.0068
ALA 1180.0069
LEU 1190.0058
GLY 1200.0044
ALA 1210.0029
PHE 1220.0011
SER 1230.0021
GLY 1240.0032
LEU 1250.0029
SER 1260.0043
SER 1270.0040
LEU 1280.0037
GLN 1290.0043
LYS 1300.0045
LEU 1310.0039
VAL 1320.0084
ALA 1330.0089
VAL 1340.0119
GLU 1350.0138
THR 1360.0120
ASN 1370.0149
LEU 1380.0130
ALA 1390.0133
SER 1400.0115
LEU 1410.0106
GLU 1420.0078
ASN 1430.0094
PHE 1440.0084
PRO 1450.0069
ILE 1460.0057
GLY 1470.0041
HIS 1480.0041
LEU 1490.0042
LYS 1500.0054
THR 1510.0056
LEU 1520.0059
LYS 1530.0073
GLU 1540.0081
LEU 1550.0077
ASN 1560.0090
VAL 1570.0128
ALA 1580.0145
HIS 1590.0162
ASN 1600.0153
LEU 1610.0152
ILE 1620.0159
GLN 1630.0147
SER 1640.0120
PHE 1650.0100
LYS 1660.0099
LEU 1670.0076
PRO 1680.0081
GLU 1690.0087
TYR 1700.0080
PHE 1710.0075
SER 1720.0075
ASN 1730.0069
LEU 1740.0067
THR 1750.0076
ASN 1760.0081
LEU 1770.0089
GLU 1780.0105
HIS 1790.0112
LEU 1800.0102
ASP 1810.0118
LEU 1820.0144
SER 1830.0165
SER 1840.0184
ASN 1850.0169
LYS 1860.0163
ILE 1870.0158
GLN 1880.0141
SER 1890.0112
ILE 1900.0095
TYR 1910.0127
CYS 1920.0132
THR 1930.0142
ASP 1940.0105
LEU 1950.0092
ARG 1960.0116
VAL 1970.0091
LEU 1980.0096
HIS 1990.0130
GLN 2000.0128
MET 2010.0118
PRO 2020.0133
LEU 2030.0141
LEU 2040.0116
ASN 2050.0145
LEU 2060.0126
SER 2070.0153
LEU 2080.0134
ASP 2090.0154
LEU 2100.0137
SER 2110.0166
LEU 2120.0181
ASN 2130.0160
PRO 2140.0152
MET 2150.0115
ASN 2160.0109
PHE 2170.0106
ILE 2180.0087
GLN 2190.0127
PRO 2200.0152
GLY 2210.0165
ALA 2220.0116
PHE 2230.0120
LYS 2240.0177
GLU 2250.0191
ILE 2260.0147
ARG 2270.0153
LEU 2280.0149
HIS 2290.0190
LYS 2300.0177
LEU 2310.0143
THR 2320.0151
LEU 2330.0130
ARG 2340.0150
ASN 2350.0148
ASN 2360.0127
PHE 2370.0120
ASP 2380.0142
SER 2390.0102
LEU 2400.0064
ASN 2410.0096
VAL 2420.0090
MET 2430.0062
LYS 2440.0070
THR 2450.0083
CYS 2460.0060
ILE 2470.0089
GLN 2480.0116
GLY 2490.0092
LEU 2500.0103
ALA 2510.0149
GLY 2520.0164
LEU 2530.0151
GLU 2540.0174
VAL 2550.0176
HIS 2560.0204
ARG 2570.0186
LEU 2580.0151
VAL 2590.0147
LEU 2600.0117
GLY 2610.0118
GLU 2620.0149
PHE 2630.0176
ARG 2640.0186
ASN 2650.0201
GLU 2660.0179
GLY 2670.0174
ASN 2680.0124
LEU 2690.0081
GLU 2700.0083
LYS 2710.0052
PHE 2720.0033
ASP 2730.0064
LYS 2740.0092
SER 2750.0087
ALA 2760.0054
LEU 2770.0093
GLU 2780.0120
GLY 2790.0109
LEU 2800.0128
CYS 2810.0165
ASN 2820.0166
LEU 2830.0158
THR 2840.0185
ILE 2850.0183
GLU 2860.0213
GLU 2870.0173
PHE 2880.0145
ARG 2890.0134
LEU 2900.0110
ALA 2910.0118
TYR 2920.0131
LEU 2930.0088
ASP 2940.0075
TYR 2950.0031
TYR 2960.0014
LEU 2970.0064
ASP 2980.0091
GLY 2990.0097
ILE 3000.0103
ILE 3010.0139
ASP 3020.0136
LEU 3030.0107
PHE 3040.0120
ASN 3050.0154
CYS 3060.0163
LEU 3070.0146
THR 3080.0156
ASN 3090.0184
VAL 3100.0171
SER 3110.0170
SER 3120.0135
PHE 3130.0109
SER 3140.0091
LEU 3150.0068
VAL 3160.0066
SER 3170.0072
VAL 3180.0048
THR 3190.0030
ILE 3200.0069
GLU 3210.0101
ARG 3220.0134
VAL 3230.0115
LYS 3240.0137
ASP 3250.0147
PHE 3260.0125
SER 3270.0135
TYR 3280.0150
ASN 3290.0152
PHE 3300.0144
GLY 3310.0151
TRP 3320.0084
GLN 3330.0082
HIS 3340.0076
LEU 3350.0060
GLU 3360.0055
LEU 3370.0047
VAL 3380.0033
ASN 3390.0020
CYS 3400.0033
LYS 3410.0045
PHE 3420.0093
GLY 3430.0116
GLN 3440.0111
PHE 3450.0088
PRO 3460.0098
THR 3470.0092
LEU 3480.0087
LYS 3490.0093
LEU 3500.0100
LYS 3510.0101
SER 3520.0062
LEU 3530.0059
LYS 3540.0073
ARG 3550.0072
LEU 3560.0050
THR 3570.0035
PHE 3580.0023
THR 3590.0019
SER 3600.0027
ASN 3610.0045
LYS 3620.0064
GLY 3630.0100
GLY 3640.0120
ASN 3650.0093
ALA 3660.0103
PHE 3670.0066
SER 3680.0067
GLU 3690.0052
VAL 3700.0056
ASP 3710.0059
LEU 3720.0062
PRO 3730.0069
SER 3740.0083
LEU 3750.0069
GLU 3760.0077
PHE 3770.0065
LEU 3780.0044
ASP 3790.0039
LEU 3800.0028
SER 3810.0028
ARG 3820.0035
ASN 3830.0048
GLY 3840.0054
LEU 3850.0057
SER 3860.0068
PHE 3870.0052
LYS 3880.0055
GLY 3890.0046
CYS 3900.0034
CYS 3910.0029
SER 3920.0045
GLN 3930.0050
SER 3940.0039
ASP 3950.0033
PHE 3960.0046
GLY 3970.0049
THR 3980.0065
ILE 3990.0087
SER 4000.0096
LEU 4010.0063
LYS 4020.0064
TYR 4030.0050
LEU 4040.0036
ASP 4050.0030
LEU 4060.0029
SER 4070.0032
PHE 4080.0043
ASN 4090.0048
GLY 4100.0058
VAL 4110.0059
ILE 4120.0046
THR 4130.0044
MET 4140.0038
SER 4150.0038
SER 4160.0035
ASN 4170.0041
PHE 4180.0040
LEU 4190.0054
GLY 4200.0061
LEU 4210.0052
GLU 4220.0066
GLN 4230.0066
LEU 4240.0047
GLU 4250.0040
HIS 4260.0030
LEU 4270.0022
ASP 4280.0024
PHE 4290.0025
GLN 4300.0035
HIS 4310.0046
SER 4320.0050
ASN 4330.0050
LEU 4340.0043
LYS 4350.0043
GLN 4360.0041
MET 4370.0035
SER 4380.0040
GLU 4390.0035
PHE 4400.0028
SER 4410.0025
VAL 4420.0018
PHE 4430.0010
LEU 4440.0021
SER 4450.0025
LEU 4460.0019
ARG 4470.0021
ASN 4480.0020
LEU 4490.0017
ILE 4500.0028
TYR 4510.0031
LEU 4520.0031
ASP 4530.0037
ILE 4540.0038
SER 4550.0045
HIS 4560.0049
THR 4570.0050
HIS 4580.0049
THR 4590.0052
ARG 4600.0053
VAL 4610.0058
ALA 4620.0043
PHE 4630.0045
ASN 4640.0048
GLY 4650.0048
ILE 4660.0046
PHE 4670.0040
ASN 4680.0037
GLY 4690.0034
LEU 4700.0037
SER 4710.0039
SER 4720.0046
LEU 4730.0047
GLU 4740.0053
VAL 4750.0052
LEU 4760.0050
LYS 4770.0050
MET 4780.0051
ALA 4790.0049
GLY 4800.0049
ASN 4810.0051
SER 4820.0052
PHE 4830.0061
GLN 4840.0070
GLU 4850.0069
ASN 4860.0059
PHE 4870.0064
LEU 4880.0061
PRO 4890.0073
ASP 4900.0077
ILE 4910.0079
PHE 4920.0068
THR 4930.0076
GLU 4940.0076
LEU 4950.0071
ARG 4960.0076
ASN 4970.0075
LEU 4980.0067
THR 4990.0062
PHE 5000.0056
LEU 5010.0053
ASP 5020.0044
LEU 5030.0043
SER 5040.0033
GLN 5050.0033
CYS 5060.0044
GLN 5070.0041
LEU 5080.0045
GLU 5090.0053
GLN 5100.0059
LEU 5110.0056
SER 5120.0074
PRO 5130.0064
THR 5140.0071
ALA 5150.0068
PHE 5160.0059
ASN 5170.0068
SER 5180.0078
LEU 5190.0069
SER 5200.0069
SER 5210.0072
LEU 5220.0055
GLN 5230.0049
VAL 5240.0039
LEU 5250.0029
ASN 5260.0021
MET 5270.0014
SER 5280.0009
HIS 5290.0017
ASN 5300.0027
ASN 5310.0039
PHE 5320.0029
PHE 5330.0042
SER 5340.0040
LEU 5350.0033
ASP 5360.0029
THR 5370.0025
PHE 5380.0024
PRO 5390.0023
TYR 5400.0013
LYS 5410.0013
CYS 5420.0034
LEU 5430.0033
ASN 5440.0041
SER 5450.0048
LEU 5460.0034
GLN 5470.0036
VAL 5480.0028
LEU 5490.0017
ASP 5500.0018
TYR 5510.0024
SER 5520.0034
LEU 5530.0036
ASN 5540.0036
HIS 5550.0042
ILE 5560.0040
MET 5570.0046
THR 5580.0047
SER 5590.0045
LYS 5600.0047
LYS 5610.0047
GLN 5620.0054
GLU 5630.0045
LEU 5640.0045
GLN 5650.0051
HIS 5660.0041
PHE 5670.0027
PRO 5680.0029
SER 5690.0044
SER 5700.0045
LEU 5710.0038
ALA 5720.0038
PHE 5730.0035
LEU 5740.0033
ASN 5750.0037
LEU 5760.0043
THR 5770.0046
GLN 5780.0047
ASN 5790.0045
ASP 5800.0042
PHE 5810.0037
ALA 5820.0044
CYS 5830.0031
THR 5840.0069
CYS 5850.0082
GLU 5860.0095
HIS 5870.0048
GLN 5880.0030
SER 5890.0036
PHE 5900.0043
LEU 5910.0019
GLN 5920.0025
TRP 5930.0039
ILE 5940.0036
LYS 5950.0032
ASP 5960.0041
GLN 5970.0043
ARG 5980.0040
GLN 5990.0041
LEU 6000.0039
LEU 6010.0037
VAL 6020.0039
GLU 6030.0042
VAL 6040.0033
GLU 6050.0040
ARG 6060.0043
MET 6070.0037
GLU 6080.0019
CYS 6090.0020
ALA 6100.0036
THR 6110.0055
PRO 6120.0085
SER 6130.0088
ASP 6140.0093
LYS 6150.0059
GLN 6160.0039
GLY 6170.0015
MET 6180.0024
PRO 6190.0025
VAL 6200.0012
LEU 6210.0030
SER 6220.0065
LEU 6230.0047
ASN 6240.0092
ILE 6250.0070
THR 6260.0121
CYS 6270.0166
GLU 10.0419
ALA 20.0433
ALA 30.0258
ALA 40.0156
LYS 50.0337
MET 60.0186
GLN 70.0309
ARG 80.0352
LEU 90.0235
VAL 100.0271
LEU 110.0141
LEU 120.0121
LEU 130.0055
ALA 140.0197
ILE 150.0227
SER 160.0255
LEU 170.0190
LEU 180.0485
LEU 190.0499
TYR 200.0248
GLN 210.0345
ASP 220.0460
LEU 230.0298
PRO 240.0200
VAL 250.0137
ARG 260.0226
SER 270.0161
GLU 280.0208
PHE 290.0177
GLU 300.0120
LEU 310.0142
ASP 320.0169
ARG 330.0159
ILE 340.0146
CYS 350.0165
GLY 360.0105
TYR 370.0073
GLY 380.0083
THR 390.0096
ALA 400.0130
ARG 410.0155
CYS 420.0214
ARG 430.0270
LYS 440.0337
LYS 450.0341
CYS 460.0222
ARG 470.0204
SER 480.0212
GLN 490.0178
GLU 500.0182
TYR 510.0206
ARG 520.0201
ILE 530.0161
GLY 540.0173
ARG 550.0205
CYS 560.0258
PRO 570.0305
ASN 580.0363
THR 590.0334
TYR 600.0332
ALA 610.0213
CYS 620.0173
CYS 630.0164
LEU 640.0133
ARG 650.0132
LYS 660.0149
TRP 670.0114
ASP 680.0098
GLU 690.0074
SER 700.0070
LEU 710.0148
LEU 720.0137
ASN 730.0132
ARG 740.0153
THR 750.0165
LYS 760.0193
PRO 770.0241
GLU 780.0246
ALA 790.0302
ALA 800.0338
ALA 810.0115
LYS 820.0081
LYS 830.0067
GLU 840.0031
MET 850.0043
ASN 860.0045
LEU 870.0041
SER 880.0041
VAL 890.0042
GLY 900.0044
LEU 910.0045
GLY 920.0069
GLY 930.0080
GLY 940.0055
SER 950.0046
ASN 960.0056
LEU 970.0050
SER 980.0043
VAL 990.0037
GLY 1000.0039
LEU 1010.0045
GLY 1020.0040
GLU 1030.0025
ILE 1040.0048
GLY 1050.0037
GLY 1060.0068
GLY 1070.0061
SER 1080.0063
LYS 1090.0054
LEU 1100.0051
LEU 1110.0023
ASP 1120.0029
ILE 1130.0043
ASN 1140.0058
LEU 1150.0074
GLY 1160.0095
ARG 1170.0118
GLY 1180.0147
GLY 1190.0143
GLY 1200.0083
SER 1210.0040
MET 1220.0032
VAL 1230.0029
ASP 1240.0022
LEU 1250.0027
THR 1260.0023
PHE 1270.0025
GLY 1280.0028
GLY 1290.0030
VAL 1300.0035
GLY 1310.0204
GLY 1320.0153
GLY 1330.0119
SER 1340.0076
THR 1350.0064
PHE 1360.0035
THR 1370.0037
PHE 1380.0040
PHE 1390.0044
PRO 1400.0049
LEU 1410.0077
VAL 1420.0097
ILE 1430.0045
GLY 1440.0059
GLY 1450.0031
GLY 1460.0285
SER 1470.0230
ASP 1480.0173
ALA 1490.0101
MET 1500.0025
TYR 1510.0041
LEU 1520.0037
GLY 1530.0040
PHE 1540.0036
ALA 1550.0040
ALA 1560.0035
GLY 1570.0040
GLY 1580.0042
GLY 1590.0092
SER 1600.0136
ALA 1610.0116
GLY 1620.0096
GLY 1630.0054
GLU 1640.0022
ASN 1650.0015
HIS 1660.0013
VAL 1670.0015
ALA 1680.0011
PHE 1690.0016
GLY 1700.0017
PRO 1710.0081
GLY 1720.0043
PRO 1730.0058
GLY 1740.0038
VAL 1750.0032
ASP 1760.0025
LEU 1770.0018
THR 1780.0014
PHE 1790.0018
GLY 1800.0026
GLY 1810.0050
VAL 1820.0036
GLN 1830.0019
PHE 1840.0038
ALA 1850.0052
MET 1860.0129
VAL 1870.0171
ASN 1880.0126
ASN 1890.0090
GLY 1900.0170
PRO 1910.0124
GLY 1920.0089
PRO 1930.0052
GLY 1940.0050
GLU 1950.0063
SER 1960.0086
PHE 1970.0047
THR 1980.0026
ALA 1990.0043
GLN 2000.0077
PRO 2010.0038
ALA 2020.0029
ASP 2030.0065
MET 2040.0024
GLN 2050.0063
ALA 2060.0028
GLY 2070.0039
ILE 2080.0067
LYS 2090.0067
GLY 2100.0147
PRO 2110.0029
GLY 2120.0069
PRO 2130.0099
GLY 2140.0108
GLY 2150.0071
SER 2160.0185
ILE 2170.0152
GLN 2180.0158
VAL 2190.0138
ILE 2200.0180
ASN 2210.0211
GLY 2220.0208
SER 2230.0154
THR 2240.0109
ILE 2250.0109
GLY 2260.0176
THR 2270.0221
GLY 2280.0168
SER 2290.0154
LYS 2300.0107
LYS 2310.0228
THR 2320.0275
ILE 2330.0184
LEU 2340.0179
ILE 2350.0167
TYR 2360.0076
SER 2370.0105
ILE 2380.0157
ILE 2390.0219
GLY 2400.0273
VAL 2410.0212
LYS 2420.0193
LYS 2430.0185
GLY 2440.0188
THR 2450.0196
LEU 2460.0246
ALA 2470.0251
TRP 2480.0174
ALA 2490.0164
ARG 2500.0112
THR 2510.0269
GLY 2520.0270
PHE 2530.0219
SER 2540.0218
PRO 2550.0198
ALA 2560.0269
LYS 2570.0250
LYS 2580.0133
LEU 2590.0089
ASN 2600.0135
ALA 2610.0253
GLY 2620.0147
VAL 2630.0076
VAL 2640.0042
ARG 2650.0130
VAL 2660.0121
PHE 2670.0089
PHE 2680.0086
LEU 2690.0059
ASN 2700.0055
GLN 2710.0048
LYS 2720.0045
LYS 2730.0034
ALA 2740.0033
LYS 2750.0038
ASP 2760.0040
VAL 2770.0030
LEU 2780.0037
ARG 2790.0046
LYS 2800.0041
THR 2810.0040
SER 2820.0072
ARG 2830.0033
PRO 2840.0050
MET 2850.0064
VAL 2860.0054
ASP 2870.0056
LEU 2880.0047
THR 2890.0042
PHE 2900.0024
GLY 2910.0052
GLY 2920.0068

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.