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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 97  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0644
GLU 270.0020
PRO 280.0036
CYS 290.0035
VAL 300.0054
GLU 310.0060
VAL 320.0071
VAL 330.0080
PRO 340.0078
ASN 350.0073
ILE 360.0068
THR 370.0050
TYR 380.0038
GLN 390.0040
CYS 400.0032
MET 410.0046
GLU 420.0057
LEU 430.0058
ASN 440.0057
PHE 450.0039
TYR 460.0051
LYS 470.0038
ILE 480.0026
PRO 490.0021
ASP 500.0034
ASN 510.0028
LEU 520.0036
PRO 530.0051
PHE 540.0057
SER 550.0056
THR 560.0040
LYS 570.0027
ASN 580.0021
LEU 590.0017
ASP 600.0017
LEU 610.0019
SER 620.0027
PHE 630.0028
ASN 640.0025
PRO 650.0024
LEU 660.0019
ARG 670.0017
HIS 680.0015
LEU 690.0011
GLY 700.0008
SER 710.0007
TYR 720.0021
SER 730.0022
PHE 740.0019
PHE 750.0020
SER 760.0022
PHE 770.0030
PRO 780.0036
GLU 790.0027
LEU 800.0018
GLN 810.0013
VAL 820.0022
LEU 830.0020
ASP 840.0024
LEU 850.0023
SER 860.0028
ARG 870.0035
CYS 880.0021
GLU 890.0025
ILE 900.0023
GLN 910.0035
THR 920.0029
ILE 930.0019
GLU 940.0016
ASP 950.0010
GLY 960.0010
ALA 970.0010
TYR 980.0013
GLN 990.0016
SER 1000.0017
LEU 1010.0019
SER 1020.0040
HIS 1030.0037
LEU 1040.0035
SER 1050.0040
THR 1060.0038
LEU 1070.0032
ILE 1080.0036
LEU 1090.0030
THR 1100.0045
GLY 1110.0051
ASN 1120.0045
PRO 1130.0056
ILE 1140.0049
GLN 1150.0060
SER 1160.0052
LEU 1170.0034
ALA 1180.0033
LEU 1190.0027
GLY 1200.0026
ALA 1210.0011
PHE 1220.0014
SER 1230.0026
GLY 1240.0033
LEU 1250.0033
SER 1260.0047
SER 1270.0059
LEU 1280.0053
GLN 1290.0053
LYS 1300.0050
LEU 1310.0044
VAL 1320.0048
ALA 1330.0038
VAL 1340.0062
GLU 1350.0069
THR 1360.0052
ASN 1370.0079
LEU 1380.0067
ALA 1390.0085
SER 1400.0070
LEU 1410.0045
GLU 1420.0061
ASN 1430.0063
PHE 1440.0034
PRO 1450.0039
ILE 1460.0033
GLY 1470.0041
HIS 1480.0057
LEU 1490.0050
LYS 1500.0065
THR 1510.0075
LEU 1520.0055
LYS 1530.0063
GLU 1540.0059
LEU 1550.0044
ASN 1560.0052
VAL 1570.0060
ALA 1580.0083
HIS 1590.0092
ASN 1600.0082
LEU 1610.0093
ILE 1620.0090
GLN 1630.0102
SER 1640.0080
PHE 1650.0061
LYS 1660.0050
LEU 1670.0037
PRO 1680.0053
GLU 1690.0069
TYR 1700.0064
PHE 1710.0048
SER 1720.0062
ASN 1730.0075
LEU 1740.0059
THR 1750.0078
ASN 1760.0084
LEU 1770.0060
GLU 1780.0073
HIS 1790.0074
LEU 1800.0060
ASP 1810.0073
LEU 1820.0085
SER 1830.0108
SER 1840.0119
ASN 1850.0105
LYS 1860.0114
ILE 1870.0100
GLN 1880.0108
SER 1890.0087
ILE 1900.0065
TYR 1910.0059
CYS 1920.0052
THR 1930.0065
ASP 1940.0055
LEU 1950.0047
ARG 1960.0064
VAL 1970.0068
LEU 1980.0064
HIS 1990.0076
GLN 2000.0098
MET 2010.0099
PRO 2020.0095
LEU 2030.0115
LEU 2040.0092
ASN 2050.0105
LEU 2060.0082
SER 2070.0097
LEU 2080.0087
ASP 2090.0100
LEU 2100.0096
SER 2110.0118
LEU 2120.0127
ASN 2130.0113
PRO 2140.0116
MET 2150.0102
ASN 2160.0100
PHE 2170.0080
ILE 2180.0064
GLN 2190.0053
PRO 2200.0052
GLY 2210.0063
ALA 2220.0055
PHE 2230.0066
LYS 2240.0074
GLU 2250.0095
ILE 2260.0091
ARG 2270.0081
LEU 2280.0085
HIS 2290.0107
LYS 2300.0101
LEU 2310.0086
THR 2320.0099
LEU 2330.0097
ARG 2340.0105
ASN 2350.0107
ASN 2360.0099
PHE 2370.0096
ASP 2380.0092
SER 2390.0062
LEU 2400.0037
ASN 2410.0036
VAL 2420.0063
MET 2430.0068
LYS 2440.0051
THR 2450.0048
CYS 2460.0070
ILE 2470.0065
GLN 2480.0056
GLY 2490.0058
LEU 2500.0072
ALA 2510.0073
GLY 2520.0082
LEU 2530.0083
GLU 2540.0082
VAL 2550.0081
HIS 2560.0080
ARG 2570.0080
LEU 2580.0070
VAL 2590.0073
LEU 2600.0067
GLY 2610.0073
GLU 2620.0095
PHE 2630.0101
ARG 2640.0096
ASN 2650.0106
GLU 2660.0107
GLY 2670.0112
ASN 2680.0081
LEU 2690.0057
GLU 2700.0058
LYS 2710.0033
PHE 2720.0008
ASP 2730.0019
LYS 2740.0041
SER 2750.0035
ALA 2760.0030
LEU 2770.0043
GLU 2780.0052
GLY 2790.0065
LEU 2800.0066
CYS 2810.0072
ASN 2820.0074
LEU 2830.0076
THR 2840.0073
ILE 2850.0063
GLU 2860.0058
GLU 2870.0055
PHE 2880.0048
ARG 2890.0047
LEU 2900.0043
ALA 2910.0046
TYR 2920.0062
LEU 2930.0040
ASP 2940.0047
TYR 2950.0033
TYR 2960.0024
LEU 2970.0039
ASP 2980.0053
GLY 2990.0053
ILE 3000.0047
ILE 3010.0059
ASP 3020.0049
LEU 3030.0036
PHE 3040.0042
ASN 3050.0056
CYS 3060.0061
LEU 3070.0047
THR 3080.0045
ASN 3090.0049
VAL 3100.0048
SER 3110.0044
SER 3120.0038
PHE 3130.0029
SER 3140.0023
LEU 3150.0015
VAL 3160.0014
SER 3170.0021
VAL 3180.0012
THR 3190.0024
ILE 3200.0038
GLU 3210.0058
ARG 3220.0062
VAL 3230.0061
LYS 3240.0064
ASP 3250.0060
PHE 3260.0059
SER 3270.0057
TYR 3280.0053
ASN 3290.0053
PHE 3300.0051
GLY 3310.0051
TRP 3320.0044
GLN 3330.0044
HIS 3340.0044
LEU 3350.0041
GLU 3360.0043
LEU 3370.0036
VAL 3380.0036
ASN 3390.0035
CYS 3400.0035
LYS 3410.0035
PHE 3420.0055
GLY 3430.0056
GLN 3440.0056
PHE 3450.0056
PRO 3460.0054
THR 3470.0058
LEU 3480.0060
LYS 3490.0055
LEU 3500.0057
LYS 3510.0058
SER 3520.0055
LEU 3530.0059
LYS 3540.0070
ARG 3550.0074
LEU 3560.0070
THR 3570.0061
PHE 3580.0048
THR 3590.0054
SER 3600.0057
ASN 3610.0048
LYS 3620.0053
GLY 3630.0054
GLY 3640.0057
ASN 3650.0057
ALA 3660.0059
PHE 3670.0061
SER 3680.0057
GLU 3690.0058
VAL 3700.0062
ASP 3710.0066
LEU 3720.0070
PRO 3730.0072
SER 3740.0074
LEU 3750.0080
GLU 3760.0088
PHE 3770.0081
LEU 3780.0067
ASP 3790.0063
LEU 3800.0050
SER 3810.0053
ARG 3820.0051
ASN 3830.0048
GLY 3840.0053
LEU 3850.0047
SER 3860.0047
PHE 3870.0049
LYS 3880.0048
GLY 3890.0049
CYS 3900.0048
CYS 3910.0050
SER 3920.0066
GLN 3930.0074
SER 3940.0081
ASP 3950.0073
PHE 3960.0078
GLY 3970.0090
THR 3980.0084
ILE 3990.0092
SER 4000.0082
LEU 4010.0090
LYS 4020.0066
TYR 4030.0060
LEU 4040.0050
ASP 4050.0049
LEU 4060.0042
SER 4070.0033
PHE 4080.0029
ASN 4090.0032
GLY 4100.0032
VAL 4110.0034
ILE 4120.0035
THR 4130.0038
MET 4140.0042
SER 4150.0048
SER 4160.0053
ASN 4170.0051
PHE 4180.0053
LEU 4190.0071
GLY 4200.0079
LEU 4210.0063
GLU 4220.0055
GLN 4230.0043
LEU 4240.0041
GLU 4250.0031
HIS 4260.0031
LEU 4270.0020
ASP 4280.0016
PHE 4290.0020
GLN 4300.0019
HIS 4310.0020
SER 4320.0020
ASN 4330.0017
LEU 4340.0027
LYS 4350.0027
GLN 4360.0034
MET 4370.0032
SER 4380.0039
GLU 4390.0040
PHE 4400.0049
SER 4410.0052
VAL 4420.0037
PHE 4430.0036
LEU 4440.0053
SER 4450.0052
LEU 4460.0038
ARG 4470.0053
ASN 4480.0041
LEU 4490.0029
ILE 4500.0033
TYR 4510.0027
LEU 4520.0039
ASP 4530.0039
ILE 4540.0038
SER 4550.0039
HIS 4560.0038
THR 4570.0034
HIS 4580.0033
THR 4590.0036
ARG 4600.0039
VAL 4610.0044
ALA 4620.0035
PHE 4630.0039
ASN 4640.0049
GLY 4650.0050
ILE 4660.0044
PHE 4670.0047
ASN 4680.0055
GLY 4690.0054
LEU 4700.0052
SER 4710.0066
SER 4720.0067
LEU 4730.0060
GLU 4740.0071
VAL 4750.0065
LEU 4760.0055
LYS 4770.0056
MET 4780.0054
ALA 4790.0055
GLY 4800.0054
ASN 4810.0052
SER 4820.0053
PHE 4830.0047
GLN 4840.0042
GLU 4850.0039
ASN 4860.0043
PHE 4870.0034
LEU 4880.0039
PRO 4890.0034
ASP 4900.0042
ILE 4910.0049
PHE 4920.0052
THR 4930.0058
GLU 4940.0059
LEU 4950.0063
ARG 4960.0074
ASN 4970.0082
LEU 4980.0075
THR 4990.0085
PHE 5000.0079
LEU 5010.0066
ASP 5020.0065
LEU 5030.0056
SER 5040.0060
GLN 5050.0062
CYS 5060.0054
GLN 5070.0053
LEU 5080.0044
GLU 5090.0039
GLN 5100.0030
LEU 5110.0029
SER 5120.0020
PRO 5130.0020
THR 5140.0032
ALA 5150.0036
PHE 5160.0044
ASN 5170.0048
SER 5180.0063
LEU 5190.0064
SER 5200.0068
SER 5210.0077
LEU 5220.0068
GLN 5230.0073
VAL 5240.0068
LEU 5250.0054
ASN 5260.0054
MET 5270.0041
SER 5280.0049
HIS 5290.0058
ASN 5300.0048
ASN 5310.0045
PHE 5320.0033
PHE 5330.0041
SER 5340.0036
LEU 5350.0030
ASP 5360.0032
THR 5370.0018
PHE 5380.0031
PRO 5390.0026
TYR 5400.0027
LYS 5410.0039
CYS 5420.0048
LEU 5430.0046
ASN 5440.0057
SER 5450.0061
LEU 5460.0047
GLN 5470.0042
VAL 5480.0037
LEU 5490.0026
ASP 5500.0031
TYR 5510.0029
SER 5520.0034
LEU 5530.0042
ASN 5540.0038
HIS 5550.0042
ILE 5560.0038
MET 5570.0044
THR 5580.0046
SER 5590.0043
LYS 5600.0047
LYS 5610.0048
GLN 5620.0060
GLU 5630.0051
LEU 5640.0044
GLN 5650.0047
HIS 5660.0042
PHE 5670.0028
PRO 5680.0032
SER 5690.0032
SER 5700.0032
LEU 5710.0021
ALA 5720.0016
PHE 5730.0014
LEU 5740.0019
ASN 5750.0023
LEU 5760.0031
THR 5770.0033
GLN 5780.0030
ASN 5790.0031
ASP 5800.0033
PHE 5810.0039
ALA 5820.0028
CYS 5830.0031
THR 5840.0027
CYS 5850.0026
GLU 5860.0019
HIS 5870.0020
GLN 5880.0022
SER 5890.0030
PHE 5900.0039
LEU 5910.0039
GLN 5920.0043
TRP 5930.0047
ILE 5940.0048
LYS 5950.0051
ASP 5960.0053
GLN 5970.0051
ARG 5980.0048
GLN 5990.0048
LEU 6000.0041
LEU 6010.0037
VAL 6020.0057
GLU 6030.0058
VAL 6040.0051
GLU 6050.0056
ARG 6060.0052
MET 6070.0064
GLU 6080.0064
CYS 6090.0055
ALA 6100.0063
THR 6110.0056
PRO 6120.0092
SER 6130.0137
ASP 6140.0150
LYS 6150.0109
GLN 6160.0123
GLY 6170.0101
MET 6180.0085
PRO 6190.0076
VAL 6200.0057
LEU 6210.0053
SER 6220.0068
LEU 6230.0056
ASN 6240.0052
ILE 6250.0039
THR 6260.0041
CYS 6270.0031
GLU 10.0483
ALA 20.0523
ALA 30.0487
ALA 40.0245
LYS 50.0233
MET 60.0248
GLN 70.0370
ARG 80.0424
LEU 90.0307
VAL 100.0334
LEU 110.0184
LEU 120.0271
LEU 130.0117
ALA 140.0128
ILE 150.0275
SER 160.0328
LEU 170.0267
LEU 180.0617
LEU 190.0644
TYR 200.0375
GLN 210.0438
ASP 220.0588
LEU 230.0362
PRO 240.0162
VAL 250.0179
ARG 260.0349
SER 270.0256
GLU 280.0290
PHE 290.0299
GLU 300.0206
LEU 310.0141
ASP 320.0155
ARG 330.0148
ILE 340.0120
CYS 350.0113
GLY 360.0087
TYR 370.0076
GLY 380.0084
THR 390.0083
ALA 400.0099
ARG 410.0139
CYS 420.0181
ARG 430.0253
LYS 440.0314
LYS 450.0331
CYS 460.0262
ARG 470.0241
SER 480.0235
GLN 490.0185
GLU 500.0196
TYR 510.0186
ARG 520.0160
ILE 530.0113
GLY 540.0102
ARG 550.0113
CYS 560.0140
PRO 570.0203
ASN 580.0252
THR 590.0166
TYR 600.0212
ALA 610.0183
CYS 620.0149
CYS 630.0150
LEU 640.0123
ARG 650.0125
LYS 660.0171
TRP 670.0133
ASP 680.0104
GLU 690.0069
SER 700.0047
LEU 710.0097
LEU 720.0074
ASN 730.0060
ARG 740.0088
THR 750.0090
LYS 760.0099
PRO 770.0140
GLU 780.0148
ALA 790.0191
ALA 800.0218
ALA 810.0175
LYS 820.0144
LYS 830.0114
GLU 840.0090
MET 850.0081
ASN 860.0087
LEU 870.0086
SER 880.0085
VAL 890.0085
GLY 900.0085
LEU 910.0060
GLY 920.0097
GLY 930.0157
GLY 940.0185
SER 950.0098
ASN 960.0041
LEU 970.0051
SER 980.0060
VAL 990.0089
GLY 1000.0091
LEU 1010.0122
GLY 1020.0086
GLU 1030.0077
ILE 1040.0152
GLY 1050.0207
GLY 1060.0037
GLY 1070.0041
SER 1080.0072
LYS 1090.0124
LEU 1100.0172
LEU 1110.0128
ASP 1120.0121
ILE 1130.0129
ASN 1140.0121
LEU 1150.0135
GLY 1160.0215
ARG 1170.0198
GLY 1180.0262
GLY 1190.0251
GLY 1200.0200
SER 1210.0112
MET 1220.0072
VAL 1230.0045
ASP 1240.0027
LEU 1250.0023
THR 1260.0041
PHE 1270.0028
GLY 1280.0028
GLY 1290.0029
VAL 1300.0018
GLY 1310.0273
GLY 1320.0216
GLY 1330.0179
SER 1340.0131
THR 1350.0112
PHE 1360.0065
THR 1370.0052
PHE 1380.0051
PHE 1390.0050
PRO 1400.0054
LEU 1410.0064
VAL 1420.0177
ILE 1430.0165
GLY 1440.0318
GLY 1450.0342
GLY 1460.0306
SER 1470.0339
ASP 1480.0340
ALA 1490.0281
MET 1500.0182
TYR 1510.0199
LEU 1520.0150
GLY 1530.0122
PHE 1540.0075
ALA 1550.0073
ALA 1560.0059
GLY 1570.0056
GLY 1580.0069
GLY 1590.0150
SER 1600.0216
ALA 1610.0195
GLY 1620.0151
GLY 1630.0081
GLU 1640.0056
ASN 1650.0032
HIS 1660.0060
VAL 1670.0068
ALA 1680.0068
PHE 1690.0071
GLY 1700.0077
PRO 1710.0138
GLY 1720.0109
PRO 1730.0073
GLY 1740.0016
VAL 1750.0066
ASP 1760.0079
LEU 1770.0060
THR 1780.0066
PHE 1790.0049
GLY 1800.0064
GLY 1810.0131
VAL 1820.0103
GLN 1830.0092
PHE 1840.0046
ALA 1850.0047
MET 1860.0044
VAL 1870.0071
ASN 1880.0055
ASN 1890.0038
GLY 1900.0067
PRO 1910.0059
GLY 1920.0040
PRO 1930.0033
GLY 1940.0022
GLU 1950.0016
SER 1960.0024
PHE 1970.0018
THR 1980.0013
ALA 1990.0015
GLN 2000.0024
PRO 2010.0010
ALA 2020.0009
ASP 2030.0018
MET 2040.0006
GLN 2050.0019
ALA 2060.0021
GLY 2070.0014
ILE 2080.0022
LYS 2090.0014
GLY 2100.0028
PRO 2110.0024
GLY 2120.0045
PRO 2130.0022
GLY 2140.0073
GLY 2150.0109
SER 2160.0073
ILE 2170.0054
GLN 2180.0062
VAL 2190.0077
ILE 2200.0118
ASN 2210.0187
GLY 2220.0155
SER 2230.0097
THR 2240.0125
ILE 2250.0159
GLY 2260.0099
THR 2270.0117
GLY 2280.0117
SER 2290.0155
LYS 2300.0100
LYS 2310.0073
THR 2320.0061
ILE 2330.0074
LEU 2340.0075
ILE 2350.0087
TYR 2360.0038
SER 2370.0074
ILE 2380.0077
ILE 2390.0113
GLY 2400.0124
VAL 2410.0104
LYS 2420.0090
LYS 2430.0081
GLY 2440.0093
THR 2450.0105
LEU 2460.0108
ALA 2470.0106
TRP 2480.0081
ALA 2490.0080
ARG 2500.0057
THR 2510.0066
GLY 2520.0106
PHE 2530.0045
SER 2540.0073
PRO 2550.0074
ALA 2560.0184
LYS 2570.0113
LYS 2580.0137
LEU 2590.0210
ASN 2600.0361
ALA 2610.0179
GLY 2620.0171
VAL 2630.0236
VAL 2640.0280
ARG 2650.0274
VAL 2660.0100
PHE 2670.0075
PHE 2680.0090
LEU 2690.0116
ASN 2700.0170
GLN 2710.0106
LYS 2720.0129
LYS 2730.0141
ALA 2740.0112
LYS 2750.0115
ASP 2760.0177
VAL 2770.0155
LEU 2780.0163
ARG 2790.0200
LYS 2800.0202
THR 2810.0209
SER 2820.0351
ARG 2830.0195
PRO 2840.0257
MET 2850.0308
VAL 2860.0266
ASP 2870.0263
LEU 2880.0236
THR 2890.0207
PHE 2900.0099
GLY 2910.0246
GLY 2920.0401

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.