CNRS Nantes University US2B US2B
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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0558
THR 260.0014
LYS 270.0024
CYS 280.0034
THR 290.0034
VAL 300.0052
SER 310.0035
HIS 320.0083
GLU 330.0125
VAL 340.0093
ALA 350.0063
ASP 360.0042
CYS 370.0041
SER 380.0041
HIS 390.0042
LEU 400.0043
LYS 410.0040
LEU 420.0050
THR 430.0073
GLN 440.0077
VAL 450.0063
PRO 460.0087
ASP 470.0106
ASP 480.0136
LEU 490.0118
PRO 500.0147
THR 510.0146
ASN 520.0165
ILE 530.0130
THR 540.0139
VAL 550.0117
LEU 560.0069
ASN 570.0066
LEU 580.0055
THR 590.0062
HIS 600.0058
ASN 610.0056
GLN 620.0068
LEU 630.0064
ARG 640.0091
ARG 650.0079
LEU 660.0066
PRO 670.0073
ALA 680.0057
ALA 690.0079
ASN 700.0073
PHE 710.0053
THR 720.0072
ARG 730.0100
TYR 740.0088
SER 750.0099
GLN 760.0119
LEU 770.0100
THR 780.0127
SER 790.0115
LEU 800.0087
ASP 810.0092
VAL 820.0082
GLY 830.0101
PHE 840.0105
ASN 850.0092
THR 860.0098
ILE 870.0093
SER 880.0111
LYS 890.0101
LEU 900.0086
GLU 910.0073
PRO 920.0073
GLU 930.0058
LEU 940.0056
CYS 950.0065
GLN 960.0054
LYS 970.0052
LEU 980.0063
PRO 990.0072
MET 1000.0090
LEU 1010.0078
LYS 1020.0097
VAL 1030.0103
LEU 1040.0094
ASN 1050.0104
LEU 1060.0100
GLN 1070.0116
HIS 1080.0125
ASN 1090.0115
GLU 1100.0114
LEU 1110.0113
SER 1120.0099
GLN 1130.0082
LEU 1140.0061
SER 1150.0049
ASP 1160.0036
LYS 1170.0039
THR 1180.0053
PHE 1190.0051
ALA 1200.0040
PHE 1210.0055
CYS 1220.0058
THR 1230.0056
ASN 1240.0062
LEU 1250.0066
THR 1260.0061
GLU 1270.0068
LEU 1280.0065
HIS 1290.0078
LEU 1300.0079
MET 1310.0094
SER 1320.0103
ASN 1330.0099
SER 1340.0098
ILE 1350.0080
GLN 1360.0073
LYS 1370.0069
ILE 1380.0055
LYS 1390.0070
ASN 1400.0066
ASN 1410.0034
PRO 1420.0028
PHE 1430.0019
VAL 1440.0023
LYS 1450.0025
GLN 1460.0012
LYS 1470.0023
ASN 1480.0033
LEU 1490.0018
ILE 1500.0019
THR 1510.0017
LEU 1520.0014
ASP 1530.0027
LEU 1540.0028
SER 1550.0039
HIS 1560.0056
ASN 1570.0049
GLY 1580.0049
LEU 1590.0042
SER 1600.0054
SER 1610.0062
THR 1620.0062
LYS 1630.0063
LEU 1640.0056
GLY 1650.0062
THR 1660.0070
GLN 1670.0068
VAL 1680.0066
GLN 1690.0052
LEU 1700.0042
GLU 1710.0052
ASN 1720.0046
LEU 1730.0042
GLN 1740.0047
GLU 1750.0041
LEU 1760.0047
LEU 1770.0048
LEU 1780.0047
SER 1790.0052
ASN 1800.0054
ASN 1810.0058
LYS 1820.0053
ILE 1830.0056
GLN 1840.0063
ALA 1850.0067
LEU 1860.0062
LYS 1870.0058
SER 1880.0058
GLU 1890.0064
GLU 1900.0069
LEU 1910.0066
ASP 1920.0066
ILE 1930.0068
PHE 1940.0067
ALA 1950.0067
ASN 1960.0063
SER 1970.0067
SER 1980.0069
LEU 1990.0072
LYS 2000.0077
LYS 2010.0076
LEU 2020.0071
GLU 2030.0080
LEU 2040.0077
SER 2050.0088
SER 2060.0111
ASN 2070.0096
GLN 2080.0100
ILE 2090.0083
LYS 2100.0088
GLU 2110.0073
PHE 2120.0054
SER 2130.0048
PRO 2140.0041
GLY 2150.0035
CYS 2160.0036
PHE 2170.0040
HIS 2180.0036
ALA 2190.0044
ILE 2200.0065
GLY 2210.0059
ARG 2220.0068
LEU 2230.0068
PHE 2240.0082
GLY 2250.0081
LEU 2260.0067
PHE 2270.0086
LEU 2280.0085
ASN 2290.0109
ASN 2300.0129
VAL 2310.0117
GLN 2320.0127
LEU 2330.0099
GLY 2340.0103
PRO 2350.0088
SER 2360.0115
LEU 2370.0091
THR 2380.0060
GLU 2390.0076
LYS 2400.0074
LEU 2410.0039
CYS 2420.0046
LEU 2430.0069
GLU 2440.0043
LEU 2450.0050
ALA 2460.0073
ASN 2470.0100
THR 2480.0085
SER 2490.0106
ILE 2500.0081
ARG 2510.0107
ASN 2520.0095
LEU 2530.0061
SER 2540.0072
LEU 2550.0061
SER 2560.0090
ASN 2570.0105
SER 2580.0087
GLN 2590.0097
LEU 2600.0069
SER 2610.0060
THR 2620.0050
THR 2630.0039
SER 2640.0057
ASN 2650.0072
THR 2660.0105
THR 2670.0073
PHE 2680.0065
LEU 2690.0100
GLY 2700.0100
LEU 2710.0090
LYS 2720.0129
TRP 2730.0143
THR 2740.0125
ASN 2750.0144
LEU 2760.0091
THR 2770.0100
MET 2780.0084
LEU 2790.0057
ASP 2800.0054
LEU 2810.0047
SER 2820.0066
TYR 2830.0074
ASN 2840.0056
ASN 2850.0058
LEU 2860.0029
ASN 2870.0025
VAL 2880.0021
VAL 2890.0023
GLY 2900.0021
ASN 2910.0039
ASP 2920.0038
SER 2930.0041
PHE 2940.0038
ALA 2950.0045
TRP 2960.0078
LEU 2970.0071
PRO 2980.0088
GLN 2990.0096
LEU 3000.0075
GLU 3010.0049
TYR 3020.0045
PHE 3030.0036
PHE 3040.0033
LEU 3050.0033
GLU 3060.0043
TYR 3070.0040
ASN 3080.0035
ASN 3090.0030
ILE 3100.0029
GLN 3110.0046
HIS 3120.0044
LEU 3130.0038
PHE 3140.0042
SER 3150.0042
HIS 3160.0040
SER 3170.0036
LEU 3180.0029
HIS 3190.0030
GLY 3200.0027
LEU 3210.0023
PHE 3220.0020
ASN 3230.0023
VAL 3240.0026
ARG 3250.0035
TYR 3260.0032
LEU 3270.0016
ASN 3280.0022
LEU 3290.0030
LYS 3300.0037
ARG 3310.0029
SER 3320.0030
PHE 3330.0031
THR 3340.0035
LYS 3350.0035
GLN 3360.0102
SER 3370.0109
ILE 3380.0162
SER 3390.0168
LEU 3400.0135
ALA 3410.0130
SER 3420.0103
LEU 3430.0094
PRO 3440.0069
LYS 3450.0070
ILE 3460.0066
ASP 3470.0076
ASP 3480.0082
PHE 3490.0074
SER 3500.0052
PHE 3510.0038
GLN 3520.0058
TRP 3530.0049
LEU 3540.0039
LYS 3550.0061
CYS 3560.0071
LEU 3570.0053
GLU 3580.0074
HIS 3590.0065
LEU 3600.0039
ASN 3610.0046
MET 3620.0042
GLU 3630.0063
ASP 3640.0078
ASN 3650.0074
ASP 3660.0095
ILE 3670.0076
PRO 3680.0098
GLY 3690.0081
ILE 3700.0059
LYS 3710.0083
SER 3720.0091
ASN 3730.0089
MET 3740.0058
PHE 3750.0046
THR 3760.0081
GLY 3770.0095
LEU 3780.0079
ILE 3790.0112
ASN 3800.0113
LEU 3810.0097
LYS 3820.0115
TYR 3830.0101
LEU 3840.0065
SER 3850.0076
LEU 3860.0066
SER 3870.0098
ASN 3880.0112
SER 3890.0086
PHE 3900.0092
THR 3910.0126
SER 3920.0118
LEU 3930.0091
ARG 3940.0097
THR 3950.0073
LEU 3960.0055
THR 3970.0048
ASN 3980.0030
GLU 3990.0047
THR 4000.0030
PHE 4010.0030
VAL 4020.0064
SER 4030.0068
LEU 4040.0064
ALA 4050.0091
HIS 4060.0120
SER 4070.0106
PRO 4080.0130
LEU 4090.0105
HIS 4100.0127
ILE 4110.0110
LEU 4120.0082
ASN 4130.0093
LEU 4140.0080
THR 4150.0113
LYS 4160.0134
ASN 4170.0111
LYS 4180.0123
ILE 4190.0094
SER 4200.0097
LYS 4210.0072
ILE 4220.0058
GLU 4230.0046
SER 4240.0037
ASP 4250.0036
ALA 4260.0030
PHE 4270.0043
SER 4280.0049
TRP 4290.0059
LEU 4300.0072
GLY 4310.0079
HIS 4320.0095
LEU 4330.0085
GLU 4340.0099
VAL 4350.0098
LEU 4360.0078
ASP 4370.0085
LEU 4380.0079
GLY 4390.0099
LEU 4400.0109
ASN 4410.0108
GLU 4420.0100
ILE 4430.0086
GLY 4440.0080
GLN 4450.0067
GLU 4460.0065
LEU 4470.0064
THR 4480.0069
GLY 4490.0067
GLN 4500.0073
GLU 4510.0057
TRP 4520.0058
ARG 4530.0055
GLY 4540.0055
LEU 4550.0059
GLU 4560.0057
ASN 4570.0056
ILE 4580.0054
PHE 4590.0055
GLU 4600.0057
ILE 4610.0045
TYR 4620.0044
LEU 4630.0051
SER 4640.0051
TYR 4650.0053
ASN 4660.0063
LYS 4670.0058
TYR 4680.0055
LEU 4690.0055
GLN 4700.0053
LEU 4710.0050
THR 4720.0064
ARG 4730.0069
ASN 4740.0074
SER 4750.0056
PHE 4760.0047
ALA 4770.0065
LEU 4780.0068
VAL 4790.0053
PRO 4800.0060
SER 4810.0055
LEU 4820.0040
GLN 4830.0045
ARG 4840.0032
LEU 4850.0018
MET 4860.0024
LEU 4870.0018
ARG 4880.0019
ARG 4890.0028
VAL 4900.0029
ALA 4910.0042
LEU 4920.0031
LYS 4930.0038
ASN 4940.0036
VAL 4950.0028
ASP 4960.0026
SER 4970.0033
SER 4980.0046
PRO 4990.0056
SER 5000.0034
PRO 5010.0025
PHE 5020.0031
GLN 5030.0052
PRO 5040.0059
LEU 5050.0054
ARG 5060.0079
ASN 5070.0081
LEU 5080.0074
THR 5090.0087
ILE 5100.0081
LEU 5110.0058
ASP 5120.0060
LEU 5130.0051
SER 5140.0066
ASN 5150.0072
ASN 5160.0060
ASN 5170.0080
ILE 5180.0070
ALA 5190.0084
ASN 5200.0072
ILE 5210.0056
ASN 5220.0038
ASP 5230.0052
ASP 5240.0051
MET 5250.0051
LEU 5260.0064
GLU 5270.0066
GLY 5280.0078
LEU 5290.0082
GLU 5300.0099
LYS 5310.0105
LEU 5320.0096
GLU 5330.0112
ILE 5340.0109
LEU 5350.0093
ASP 5360.0103
LEU 5370.0097
GLN 5380.0109
HIS 5390.0109
ASN 5400.0097
ASN 5410.0105
LEU 5420.0101
ALA 5430.0103
ARG 5440.0097
LEU 5450.0093
TRP 5460.0087
LYS 5470.0082
HIS 5480.0078
ALA 5490.0082
ASN 5500.0091
PRO 5510.0099
GLY 5520.0102
GLY 5530.0095
PRO 5540.0086
ILE 5550.0084
TYR 5560.0073
PHE 5570.0081
LEU 5580.0093
LYS 5590.0088
GLY 5600.0097
LEU 5610.0092
SER 5620.0100
HIS 5630.0108
LEU 5640.0104
HIS 5650.0111
ILE 5660.0114
LEU 5670.0099
ASN 5680.0105
LEU 5690.0094
GLU 5700.0108
SER 5710.0111
ASN 5720.0107
GLY 5730.0097
PHE 5740.0082
ASP 5750.0070
GLU 5760.0057
ILE 5770.0056
PRO 5780.0049
VAL 5790.0045
GLU 5800.0058
VAL 5810.0054
PHE 5820.0060
LYS 5830.0060
ASP 5840.0074
LEU 5850.0078
PHE 5860.0076
GLU 5870.0087
LEU 5880.0072
LYS 5890.0079
ILE 5900.0077
ILE 5910.0067
ASP 5920.0074
LEU 5930.0064
GLY 5940.0078
LEU 5950.0088
ASN 5960.0076
ASN 5970.0071
LEU 5980.0047
ASN 5990.0047
THR 6000.0044
LEU 6010.0024
PRO 6020.0027
ALA 6030.0041
SER 6040.0045
VAL 6050.0030
PHE 6060.0026
ASN 6070.0048
ASN 6080.0060
GLN 6090.0048
VAL 6100.0059
SER 6110.0056
LEU 6120.0037
LYS 6130.0036
SER 6140.0029
LEU 6150.0018
ASN 6160.0036
LEU 6170.0033
GLN 6180.0036
LYS 6190.0044
ASN 6200.0044
LEU 6210.0061
ILE 6220.0058
THR 6230.0067
SER 6240.0067
VAL 6250.0061
GLU 6260.0070
LYS 6270.0068
LYS 6280.0068
VAL 6290.0049
PHE 6300.0044
GLY 6310.0054
PRO 6320.0048
ALA 6330.0030
PHE 6340.0038
ARG 6350.0047
ASN 6360.0040
LEU 6370.0030
THR 6380.0020
GLU 6390.0018
LEU 6400.0026
ASP 6410.0049
MET 6420.0049
ARG 6430.0048
PHE 6440.0047
ASN 6450.0048
PRO 6460.0074
PHE 6470.0062
ASP 6480.0048
CYS 6490.0038
THR 6500.0025
CYS 6510.0018
GLU 6520.0040
SER 6530.0060
ILE 6540.0059
ALA 6550.0045
TRP 6560.0066
PHE 6570.0064
VAL 6580.0064
ASN 6590.0063
TRP 6600.0061
ILE 6610.0066
ASN 6620.0057
GLU 6630.0059
THR 6640.0072
HIS 6650.0087
THR 6660.0065
ASN 6670.0066
ILE 6680.0065
PRO 6690.0069
GLU 6700.0066
LEU 6710.0081
SER 6720.0082
SER 6730.0083
HIS 6740.0078
TYR 6750.0071
LEU 6760.0092
CYS 6770.0075
ASN 6780.0095
THR 6790.0079
PRO 6800.0071
PRO 6810.0145
HIS 6820.0135
TYR 6830.0101
HIS 6840.0134
GLY 6850.0139
PHE 6860.0098
PRO 6870.0088
VAL 6880.0066
ARG 6890.0058
LEU 6900.0047
PHE 6910.0069
ASP 6920.0073
THR 6930.0101
SER 6940.0183
SER 6950.0206
CYS 6960.0221
GLU 10.0200
ALA 20.0163
ALA 30.0152
ALA 40.0098
LYS 50.0065
MET 60.0061
GLN 70.0052
ARG 80.0027
LEU 90.0034
VAL 100.0061
LEU 110.0039
LEU 120.0040
LEU 130.0061
ALA 140.0066
ILE 150.0054
SER 160.0162
LEU 170.0218
LEU 180.0146
LEU 190.0085
TYR 200.0193
GLN 210.0225
ASP 220.0181
LEU 230.0192
PRO 240.0239
VAL 250.0136
ARG 260.0208
SER 270.0243
GLU 280.0113
PHE 290.0243
GLU 300.0229
LEU 310.0127
ASP 320.0087
ARG 330.0126
ILE 340.0099
CYS 350.0091
GLY 360.0220
TYR 370.0312
GLY 380.0247
THR 390.0147
ALA 400.0062
ARG 410.0077
CYS 420.0052
ARG 430.0029
LYS 440.0020
LYS 450.0017
CYS 460.0031
ARG 470.0047
SER 480.0065
GLN 490.0070
GLU 500.0056
TYR 510.0037
ARG 520.0022
ILE 530.0026
GLY 540.0011
ARG 550.0020
CYS 560.0022
PRO 570.0025
ASN 580.0030
THR 590.0016
TYR 600.0013
ALA 610.0008
CYS 620.0030
CYS 630.0028
LEU 640.0058
ARG 650.0066
LYS 660.0080
TRP 670.0056
ASP 680.0085
GLU 690.0127
SER 700.0168
LEU 710.0128
LEU 720.0114
ASN 730.0136
ARG 740.0145
THR 750.0124
LYS 760.0082
PRO 770.0055
GLU 780.0043
ALA 790.0158
ALA 800.0200
ALA 810.0483
LYS 820.0381
LYS 830.0322
GLU 840.0231
MET 850.0175
ASN 860.0172
LEU 870.0134
SER 880.0138
VAL 890.0140
GLY 900.0135
LEU 910.0132
GLY 920.0112
GLY 930.0128
GLY 940.0167
SER 950.0195
ASN 960.0178
LEU 970.0182
SER 980.0179
VAL 990.0173
GLY 1000.0190
LEU 1010.0179
GLY 1020.0168
GLU 1030.0225
ILE 1040.0371
GLY 1050.0483
GLY 1060.0144
GLY 1070.0195
SER 1080.0222
LYS 1090.0257
LEU 1100.0350
LEU 1110.0184
ASP 1120.0150
ILE 1130.0052
ASN 1140.0092
LEU 1150.0033
GLY 1160.0186
ARG 1170.0256
GLY 1180.0246
GLY 1190.0264
GLY 1200.0248
SER 1210.0138
MET 1220.0126
VAL 1230.0119
ASP 1240.0097
LEU 1250.0098
THR 1260.0021
PHE 1270.0028
GLY 1280.0077
GLY 1290.0128
VAL 1300.0151
GLY 1310.0095
GLY 1320.0093
GLY 1330.0109
SER 1340.0108
THR 1350.0127
PHE 1360.0111
THR 1370.0112
PHE 1380.0098
PHE 1390.0098
PRO 1400.0087
LEU 1410.0128
VAL 1420.0268
ILE 1430.0318
GLY 1440.0463
GLY 1450.0558
GLY 1460.0429
SER 1470.0383
ASP 1480.0313
ALA 1490.0233
MET 1500.0124
TYR 1510.0066
LEU 1520.0046
GLY 1530.0076
PHE 1540.0109
ALA 1550.0150
ALA 1560.0101
GLY 1570.0117
GLY 1580.0113
GLY 1590.0119
SER 1600.0113
ALA 1610.0117
GLY 1620.0067
GLY 1630.0051
GLU 1640.0038
ASN 1650.0088
HIS 1660.0111
VAL 1670.0128
ALA 1680.0130
PHE 1690.0145
GLY 1700.0154
PRO 1710.0082
GLY 1720.0086
PRO 1730.0167
GLY 1740.0103
VAL 1750.0135
ASP 1760.0192
LEU 1770.0150
THR 1780.0173
PHE 1790.0169
GLY 1800.0224
GLY 1810.0391
VAL 1820.0311
GLN 1830.0233
PHE 1840.0168
ALA 1850.0195
MET 1860.0412
VAL 1870.0480
ASN 1880.0232
ASN 1890.0106
GLY 1900.0410
PRO 1910.0261
GLY 1920.0220
PRO 1930.0147
GLY 1940.0142
GLU 1950.0086
SER 1960.0203
PHE 1970.0133
THR 1980.0079
ALA 1990.0064
GLN 2000.0116
PRO 2010.0109
ALA 2020.0030
ASP 2030.0110
MET 2040.0110
GLN 2050.0022
ALA 2060.0097
GLY 2070.0124
ILE 2080.0114
LYS 2090.0157
GLY 2100.0280
PRO 2110.0151
GLY 2120.0139
PRO 2130.0083
GLY 2140.0085
GLY 2150.0145
SER 2160.0092
ILE 2170.0093
GLN 2180.0143
VAL 2190.0170
ILE 2200.0223
ASN 2210.0393
GLY 2220.0399
SER 2230.0314
THR 2240.0134
ILE 2250.0129
GLY 2260.0063
THR 2270.0061
GLY 2280.0090
SER 2290.0108
LYS 2300.0118
LYS 2310.0104
THR 2320.0109
ILE 2330.0086
LEU 2340.0089
ILE 2350.0071
TYR 2360.0068
SER 2370.0069
ILE 2380.0082
ILE 2390.0077
GLY 2400.0095
VAL 2410.0115
LYS 2420.0093
LYS 2430.0150
GLY 2440.0258
THR 2450.0204
LEU 2460.0099
ALA 2470.0079
TRP 2480.0059
ALA 2490.0044
ARG 2500.0044
THR 2510.0245
GLY 2520.0260
PHE 2530.0191
SER 2540.0199
PRO 2550.0217
ALA 2560.0383
LYS 2570.0259
LYS 2580.0113
LEU 2590.0090
ASN 2600.0125
ALA 2610.0269
GLY 2620.0217
VAL 2630.0191
VAL 2640.0163
ARG 2650.0138
VAL 2660.0134
PHE 2670.0068
PHE 2680.0146
LEU 2690.0049
ASN 2700.0111
GLN 2710.0104
LYS 2720.0042
LYS 2730.0031
ALA 2740.0058
LYS 2750.0085
ASP 2760.0104
VAL 2770.0085
LEU 2780.0123
ARG 2790.0128
LYS 2800.0075
THR 2810.0204
SER 2820.0175
ARG 2830.0109
PRO 2840.0073
MET 2850.0129
VAL 2860.0249
ASP 2870.0193
LEU 2880.0083
THR 2890.0043
PHE 2900.0091
GLY 2910.0154
GLY 2920.0290

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.