CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0530
THR 260.0047
LYS 270.0031
CYS 280.0015
THR 290.0013
VAL 300.0015
SER 310.0031
HIS 320.0045
GLU 330.0040
VAL 340.0030
ALA 350.0013
ASP 360.0008
CYS 370.0012
SER 380.0020
HIS 390.0036
LEU 400.0039
LYS 410.0046
LEU 420.0043
THR 430.0055
GLN 440.0052
VAL 450.0043
PRO 460.0041
ASP 470.0050
ASP 480.0042
LEU 490.0033
PRO 500.0040
THR 510.0054
ASN 520.0053
ILE 530.0041
THR 540.0045
VAL 550.0032
LEU 560.0022
ASN 570.0009
LEU 580.0014
THR 590.0014
HIS 600.0028
ASN 610.0035
GLN 620.0047
LEU 630.0045
ARG 640.0056
ARG 650.0056
LEU 660.0052
PRO 670.0064
ALA 680.0067
ALA 690.0073
ASN 700.0061
PHE 710.0058
THR 720.0070
ARG 730.0064
TYR 740.0054
SER 750.0065
GLN 760.0060
LEU 770.0049
THR 780.0047
SER 790.0034
LEU 800.0027
ASP 810.0015
VAL 820.0020
GLY 830.0014
PHE 840.0024
ASN 850.0034
THR 860.0044
ILE 870.0044
SER 880.0052
LYS 890.0055
LEU 900.0051
GLU 910.0061
PRO 920.0064
GLU 930.0071
LEU 940.0060
CYS 950.0060
GLN 960.0073
LYS 970.0070
LEU 980.0060
PRO 990.0068
MET 1000.0061
LEU 1010.0048
LYS 1020.0044
VAL 1030.0032
LEU 1040.0028
ASN 1050.0017
LEU 1060.0021
GLN 1070.0014
HIS 1080.0022
ASN 1090.0031
GLU 1100.0040
LEU 1110.0036
SER 1120.0037
GLN 1130.0042
LEU 1140.0041
SER 1150.0049
ASP 1160.0052
LYS 1170.0058
THR 1180.0050
PHE 1190.0047
ALA 1200.0056
PHE 1210.0062
CYS 1220.0053
THR 1230.0057
ASN 1240.0054
LEU 1250.0043
THR 1260.0039
GLU 1270.0029
LEU 1280.0024
HIS 1290.0015
LEU 1300.0016
MET 1310.0010
SER 1320.0018
ASN 1330.0024
SER 1340.0027
ILE 1350.0026
GLN 1360.0025
LYS 1370.0027
ILE 1380.0028
LYS 1390.0035
ASN 1400.0039
ASN 1410.0040
PRO 1420.0039
PHE 1430.0037
VAL 1440.0044
LYS 1450.0049
GLN 1460.0043
LYS 1470.0047
ASN 1480.0046
LEU 1490.0037
ILE 1500.0034
THR 1510.0024
LEU 1520.0020
ASP 1530.0012
LEU 1540.0010
SER 1550.0004
HIS 1560.0010
ASN 1570.0014
GLY 1580.0016
LEU 1590.0012
SER 1600.0010
SER 1610.0009
THR 1620.0010
LYS 1630.0017
LEU 1640.0022
GLY 1650.0027
THR 1660.0030
GLN 1670.0034
VAL 1680.0035
GLN 1690.0035
LEU 1700.0034
GLU 1710.0037
ASN 1720.0038
LEU 1730.0030
GLN 1740.0028
GLU 1750.0021
LEU 1760.0015
LEU 1770.0009
LEU 1780.0005
SER 1790.0003
ASN 1800.0007
ASN 1810.0007
LYS 1820.0008
ILE 1830.0002
GLN 1840.0005
ALA 1850.0007
LEU 1860.0008
LYS 1870.0009
SER 1880.0015
GLU 1890.0014
GLU 1900.0013
LEU 1910.0015
ASP 1920.0020
ILE 1930.0023
PHE 1940.0025
ALA 1950.0028
ASN 1960.0033
SER 1970.0029
SER 1980.0029
LEU 1990.0023
LYS 2000.0024
LYS 2010.0018
LEU 2020.0015
GLU 2030.0011
LEU 2040.0009
SER 2050.0010
SER 2060.0009
ASN 2070.0007
GLN 2080.0010
ILE 2090.0010
LYS 2100.0012
GLU 2110.0014
PHE 2120.0015
SER 2130.0016
PRO 2140.0019
GLY 2150.0020
CYS 2160.0015
PHE 2170.0018
HIS 2180.0022
ALA 2190.0020
ILE 2200.0022
GLY 2210.0025
ARG 2220.0024
LEU 2230.0021
PHE 2240.0022
GLY 2250.0018
LEU 2260.0016
PHE 2270.0014
LEU 2280.0015
ASN 2290.0014
ASN 2300.0014
VAL 2310.0015
GLN 2320.0018
LEU 2330.0020
GLY 2340.0022
PRO 2350.0024
SER 2360.0025
LEU 2370.0022
THR 2380.0021
GLU 2390.0025
LYS 2400.0024
LEU 2410.0020
CYS 2420.0023
LEU 2430.0025
GLU 2440.0022
LEU 2450.0022
ALA 2460.0024
ASN 2470.0025
THR 2480.0023
SER 2490.0023
ILE 2500.0021
ARG 2510.0020
ASN 2520.0017
LEU 2530.0018
SER 2540.0016
LEU 2550.0017
SER 2560.0016
ASN 2570.0018
SER 2580.0020
GLN 2590.0022
LEU 2600.0022
SER 2610.0025
THR 2620.0025
THR 2630.0024
SER 2640.0026
ASN 2650.0025
THR 2660.0028
THR 2670.0025
PHE 2680.0023
LEU 2690.0026
GLY 2700.0026
LEU 2710.0023
LYS 2720.0024
TRP 2730.0025
THR 2740.0022
ASN 2750.0020
LEU 2760.0020
THR 2770.0016
MET 2780.0015
LEU 2790.0016
ASP 2800.0015
LEU 2810.0017
SER 2820.0016
TYR 2830.0019
ASN 2840.0022
ASN 2850.0023
LEU 2860.0023
ASN 2870.0027
VAL 2880.0026
VAL 2890.0022
GLY 2900.0024
ASN 2910.0023
ASP 2920.0020
SER 2930.0021
PHE 2940.0016
ALA 2950.0016
TRP 2960.0020
LEU 2970.0017
PRO 2980.0015
GLN 2990.0014
LEU 3000.0013
GLU 3010.0013
TYR 3020.0013
PHE 3030.0012
PHE 3040.0012
LEU 3050.0014
GLU 3060.0014
TYR 3070.0017
ASN 3080.0021
ASN 3090.0024
ILE 3100.0023
GLN 3110.0030
HIS 3120.0029
LEU 3130.0023
PHE 3140.0024
SER 3150.0021
HIS 3160.0018
SER 3170.0018
LEU 3180.0013
HIS 3190.0012
GLY 3200.0010
LEU 3210.0009
PHE 3220.0010
ASN 3230.0013
VAL 3240.0012
ARG 3250.0015
TYR 3260.0015
LEU 3270.0011
ASN 3280.0011
LEU 3290.0013
LYS 3300.0013
ARG 3310.0017
SER 3320.0018
PHE 3330.0023
THR 3340.0029
LYS 3350.0032
GLN 3360.0039
SER 3370.0045
ILE 3380.0049
SER 3390.0055
LEU 3400.0052
ALA 3410.0048
SER 3420.0043
LEU 3430.0038
PRO 3440.0032
LYS 3450.0031
ILE 3460.0028
ASP 3470.0029
ASP 3480.0030
PHE 3490.0025
SER 3500.0020
PHE 3510.0017
GLN 3520.0018
TRP 3530.0012
LEU 3540.0013
LYS 3550.0018
CYS 3560.0021
LEU 3570.0018
GLU 3580.0024
HIS 3590.0020
LEU 3600.0015
ASN 3610.0014
MET 3620.0015
GLU 3630.0015
ASP 3640.0019
ASN 3650.0024
ASP 3660.0032
ILE 3670.0032
PRO 3680.0039
GLY 3690.0038
ILE 3700.0037
LYS 3710.0041
SER 3720.0044
ASN 3730.0037
MET 3740.0030
PHE 3750.0028
THR 3760.0031
GLY 3770.0028
LEU 3780.0026
ILE 3790.0033
ASN 3800.0032
LEU 3810.0031
LYS 3820.0036
TYR 3830.0029
LEU 3840.0024
SER 3850.0018
LEU 3860.0021
SER 3870.0019
ASN 3880.0022
SER 3890.0023
PHE 3900.0031
THR 3910.0041
SER 3920.0046
LEU 3930.0045
ARG 3940.0053
THR 3950.0058
LEU 3960.0057
THR 3970.0067
ASN 3980.0072
GLU 3990.0064
THR 4000.0053
PHE 4010.0048
VAL 4020.0053
SER 4030.0043
LEU 4040.0042
ALA 4050.0053
HIS 4060.0050
SER 4070.0043
PRO 4080.0050
LEU 4090.0043
HIS 4100.0047
ILE 4110.0038
LEU 4120.0032
ASN 4130.0023
LEU 4140.0026
THR 4150.0021
LYS 4160.0026
ASN 4170.0032
LYS 4180.0041
ILE 4190.0045
SER 4200.0055
LYS 4210.0063
ILE 4220.0063
GLU 4230.0075
SER 4240.0082
ASP 4250.0080
ALA 4260.0066
PHE 4270.0061
SER 4280.0072
TRP 4290.0065
LEU 4300.0059
GLY 4310.0071
HIS 4320.0066
LEU 4330.0056
GLU 4340.0058
VAL 4350.0046
LEU 4360.0040
ASP 4370.0029
LEU 4380.0031
GLY 4390.0024
LEU 4400.0023
ASN 4410.0034
GLU 4420.0047
ILE 4430.0051
GLY 4440.0063
GLN 4450.0071
GLU 4460.0081
LEU 4470.0078
THR 4480.0093
GLY 4490.0089
GLN 4500.0093
GLU 4510.0077
TRP 4520.0075
ARG 4530.0086
GLY 4540.0085
LEU 4550.0076
GLU 4560.0087
ASN 4570.0080
ILE 4580.0069
PHE 4590.0070
GLU 4600.0056
ILE 4610.0047
TYR 4620.0033
LEU 4630.0033
SER 4640.0022
TYR 4650.0023
ASN 4660.0036
LYS 4670.0050
TYR 4680.0058
LEU 4690.0060
GLN 4700.0073
LEU 4710.0079
THR 4720.0096
ARG 4730.0107
ASN 4740.0106
SER 4750.0088
PHE 4760.0085
ALA 4770.0103
LEU 4780.0100
VAL 4790.0090
PRO 4800.0101
SER 4810.0096
LEU 4820.0081
GLN 4830.0080
ARG 4840.0063
LEU 4850.0053
MET 4860.0038
LEU 4870.0034
ARG 4880.0020
ARG 4890.0023
VAL 4900.0036
ALA 4910.0048
LEU 4920.0053
LYS 4930.0069
ASN 4940.0082
VAL 4950.0074
ASP 4960.0087
SER 4970.0103
SER 4980.0119
PRO 4990.0120
SER 5000.0101
PRO 5010.0092
PHE 5020.0087
GLN 5030.0106
PRO 5040.0112
LEU 5050.0099
ARG 5060.0114
ASN 5070.0108
LEU 5080.0090
THR 5090.0089
ILE 5100.0070
LEU 5110.0057
ASP 5120.0039
LEU 5130.0032
SER 5140.0019
ASN 5150.0021
ASN 5160.0032
ASN 5170.0039
ILE 5180.0045
ALA 5190.0053
ASN 5200.0067
ILE 5210.0070
ASN 5220.0089
ASP 5230.0095
ASP 5240.0105
MET 5250.0089
LEU 5260.0090
GLU 5270.0112
GLY 5280.0124
LEU 5290.0108
GLU 5300.0122
LYS 5310.0116
LEU 5320.0096
GLU 5330.0095
ILE 5340.0076
LEU 5350.0060
ASP 5360.0045
LEU 5370.0030
GLN 5380.0025
HIS 5390.0025
ASN 5400.0025
ASN 5410.0036
LEU 5420.0034
ALA 5430.0031
ARG 5440.0050
LEU 5450.0054
TRP 5460.0043
LYS 5470.0046
HIS 5480.0058
ALA 5490.0072
ASN 5500.0078
PRO 5510.0101
GLY 5520.0109
GLY 5530.0091
PRO 5540.0073
ILE 5550.0076
TYR 5560.0080
PHE 5570.0078
LEU 5580.0079
LYS 5590.0100
GLY 5600.0118
LEU 5610.0106
SER 5620.0125
HIS 5630.0123
LEU 5640.0102
HIS 5650.0105
ILE 5660.0088
LEU 5670.0069
ASN 5680.0054
LEU 5690.0037
GLU 5700.0040
SER 5710.0036
ASN 5720.0022
GLY 5730.0032
PHE 5740.0020
ASP 5750.0024
GLU 5760.0021
ILE 5770.0033
PRO 5780.0051
VAL 5790.0065
GLU 5800.0082
VAL 5810.0071
PHE 5820.0082
LYS 5830.0101
ASP 5840.0115
LEU 5850.0106
PHE 5860.0125
GLU 5870.0130
LEU 5880.0113
LYS 5890.0120
ILE 5900.0106
ILE 5910.0080
ASP 5920.0068
LEU 5930.0052
GLY 5940.0061
LEU 5950.0058
ASN 5960.0042
ASN 5970.0045
LEU 5980.0036
ASN 5990.0044
THR 6000.0031
LEU 6010.0035
PRO 6020.0040
ALA 6030.0058
SER 6040.0079
VAL 6050.0070
PHE 6060.0086
ASN 6070.0101
ASN 6080.0112
GLN 6090.0111
VAL 6100.0132
SER 6110.0137
LEU 6120.0120
LYS 6130.0131
SER 6140.0117
LEU 6150.0097
ASN 6160.0086
LEU 6170.0073
GLN 6180.0084
LYS 6190.0082
ASN 6200.0065
LEU 6210.0068
ILE 6220.0069
THR 6230.0080
SER 6240.0076
VAL 6250.0084
GLU 6260.0078
LYS 6270.0093
LYS 6280.0077
VAL 6290.0070
PHE 6300.0089
GLY 6310.0102
PRO 6320.0111
ALA 6330.0106
PHE 6340.0120
ARG 6350.0138
ASN 6360.0142
LEU 6370.0135
THR 6380.0150
GLU 6390.0136
LEU 6400.0119
ASP 6410.0109
MET 6420.0100
ARG 6430.0111
PHE 6440.0109
ASN 6450.0097
PRO 6460.0104
PHE 6470.0109
ASP 6480.0110
CYS 6490.0129
THR 6500.0124
CYS 6510.0124
GLU 6520.0099
SER 6530.0096
ILE 6540.0115
ALA 6550.0131
TRP 6560.0126
PHE 6570.0125
VAL 6580.0145
ASN 6590.0154
TRP 6600.0147
ILE 6610.0152
ASN 6620.0168
GLU 6630.0170
THR 6640.0160
HIS 6650.0160
THR 6660.0160
ASN 6670.0160
ILE 6680.0147
PRO 6690.0150
GLU 6700.0156
LEU 6710.0158
SER 6720.0174
SER 6730.0167
HIS 6740.0143
TYR 6750.0138
LEU 6760.0143
CYS 6770.0139
ASN 6780.0133
THR 6790.0125
PRO 6800.0142
PRO 6810.0163
HIS 6820.0177
TYR 6830.0166
HIS 6840.0163
GLY 6850.0168
PHE 6860.0171
PRO 6870.0165
VAL 6880.0150
ARG 6890.0166
LEU 6900.0182
PHE 6910.0169
ASP 6920.0179
THR 6930.0168
SER 6940.0184
SER 6950.0173
CYS 6960.0152
GLU 10.0056
ALA 20.0058
ALA 30.0057
ALA 40.0050
LYS 50.0048
MET 60.0050
GLN 70.0046
ARG 80.0039
LEU 90.0041
VAL 100.0041
LEU 110.0034
LEU 120.0031
LEU 130.0034
ALA 140.0031
ILE 150.0024
SER 160.0025
LEU 170.0026
LEU 180.0020
LEU 190.0018
TYR 200.0022
GLN 210.0020
ASP 220.0020
LEU 230.0028
PRO 240.0034
VAL 250.0037
ARG 260.0049
SER 270.0069
GLU 280.0061
PHE 290.0085
GLU 300.0097
LEU 310.0089
ASP 320.0074
ARG 330.0087
ILE 340.0094
CYS 350.0085
GLY 360.0092
TYR 370.0111
GLY 380.0114
THR 390.0110
ALA 400.0091
ARG 410.0083
CYS 420.0069
ARG 430.0061
LYS 440.0049
LYS 450.0043
CYS 460.0046
ARG 470.0056
SER 480.0049
GLN 490.0062
GLU 500.0060
TYR 510.0050
ARG 520.0045
ILE 530.0060
GLY 540.0053
ARG 550.0045
CYS 560.0053
PRO 570.0050
ASN 580.0046
THR 590.0032
TYR 600.0041
ALA 610.0042
CYS 620.0059
CYS 630.0063
LEU 640.0076
ARG 650.0080
LYS 660.0086
TRP 670.0104
ASP 680.0088
GLU 690.0060
SER 700.0081
LEU 710.0112
LEU 720.0088
ASN 730.0050
ARG 740.0089
THR 750.0103
LYS 760.0037
PRO 770.0054
GLU 780.0094
ALA 790.0144
ALA 800.0129
ALA 810.0141
LYS 820.0152
LYS 830.0121
GLU 840.0137
MET 850.0119
ASN 860.0154
LEU 870.0151
SER 880.0194
VAL 890.0217
GLY 900.0260
LEU 910.0304
GLY 920.0353
GLY 930.0397
GLY 940.0371
SER 950.0343
ASN 960.0287
LEU 970.0258
SER 980.0229
VAL 990.0197
GLY 1000.0192
LEU 1010.0164
GLY 1020.0194
GLU 1030.0190
ILE 1040.0225
GLY 1050.0242
GLY 1060.0209
GLY 1070.0186
SER 1080.0150
LYS 1090.0140
LEU 1100.0128
LEU 1110.0124
ASP 1120.0157
ILE 1130.0186
ASN 1140.0227
LEU 1150.0253
GLY 1160.0320
ARG 1170.0356
GLY 1180.0388
GLY 1190.0385
GLY 1200.0377
SER 1210.0325
MET 1220.0297
VAL 1230.0242
ASP 1240.0218
LEU 1250.0162
THR 1260.0139
PHE 1270.0093
GLY 1280.0082
GLY 1290.0058
VAL 1300.0047
GLY 1310.0090
GLY 1320.0113
GLY 1330.0131
SER 1340.0118
THR 1350.0130
PHE 1360.0115
THR 1370.0151
PHE 1380.0145
PHE 1390.0169
PRO 1400.0182
LEU 1410.0156
VAL 1420.0189
ILE 1430.0180
GLY 1440.0207
GLY 1450.0235
GLY 1460.0232
SER 1470.0201
ASP 1480.0214
ALA 1490.0160
MET 1500.0149
TYR 1510.0097
LEU 1520.0083
GLY 1530.0074
PHE 1540.0079
ALA 1550.0125
ALA 1560.0128
GLY 1570.0151
GLY 1580.0165
GLY 1590.0166
SER 1600.0157
ALA 1610.0161
GLY 1620.0114
GLY 1630.0107
GLU 1640.0104
ASN 1650.0133
HIS 1660.0177
VAL 1670.0198
ALA 1680.0251
PHE 1690.0272
GLY 1700.0331
PRO 1710.0373
GLY 1720.0387
PRO 1730.0368
GLY 1740.0343
VAL 1750.0293
ASP 1760.0295
LEU 1770.0250
THR 1780.0245
PHE 1790.0218
GLY 1800.0221
GLY 1810.0276
VAL 1820.0311
GLN 1830.0326
PHE 1840.0329
ALA 1850.0369
MET 1860.0358
VAL 1870.0384
ASN 1880.0356
ASN 1890.0354
GLY 1900.0336
PRO 1910.0283
GLY 1920.0147
PRO 1930.0210
GLY 1940.0314
GLU 1950.0288
SER 1960.0345
PHE 1970.0344
THR 1980.0393
ALA 1990.0402
GLN 2000.0475
PRO 2010.0530
ALA 2020.0530
ASP 2030.0403
MET 2040.0407
GLN 2050.0408
ALA 2060.0352
GLY 2070.0291
ILE 2080.0173
LYS 2090.0137
GLY 2100.0109
PRO 2110.0125
GLY 2120.0128
PRO 2130.0133
GLY 2140.0132
GLY 2150.0126
SER 2160.0176
ILE 2170.0199
GLN 2180.0170
VAL 2190.0195
ILE 2200.0175
ASN 2210.0174
GLY 2220.0156
SER 2230.0156
THR 2240.0116
ILE 2250.0142
GLY 2260.0143
THR 2270.0143
GLY 2280.0145
SER 2290.0147
LYS 2300.0149
LYS 2310.0146
THR 2320.0146
ILE 2330.0145
LEU 2340.0146
ILE 2350.0143
TYR 2360.0159
SER 2370.0152
ILE 2380.0161
ILE 2390.0150
GLY 2400.0163
VAL 2410.0165
LYS 2420.0164
LYS 2430.0137
GLY 2440.0121
THR 2450.0144
LEU 2460.0164
ALA 2470.0153
TRP 2480.0148
ALA 2490.0137
ARG 2500.0134
THR 2510.0128
GLY 2520.0130
PHE 2530.0118
SER 2540.0119
PRO 2550.0114
ALA 2560.0110
LYS 2570.0109
LYS 2580.0104
LEU 2590.0089
ASN 2600.0084
ALA 2610.0069
GLY 2620.0075
VAL 2630.0068
VAL 2640.0076
ARG 2650.0080
VAL 2660.0094
PHE 2670.0076
PHE 2680.0077
LEU 2690.0069
ASN 2700.0095
GLN 2710.0107
LYS 2720.0139
LYS 2730.0111
ALA 2740.0075
LYS 2750.0111
ASP 2760.0155
VAL 2770.0125
LEU 2780.0121
ARG 2790.0179
LYS 2800.0203
THR 2810.0204
SER 2820.0216
ARG 2830.0193
PRO 2840.0205
MET 2850.0192
VAL 2860.0208
ASP 2870.0228
LEU 2880.0201
THR 2890.0246
PHE 2900.0248
GLY 2910.0328
GLY 2920.0349

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.