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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0584
THR 260.0092
LYS 270.0072
CYS 280.0064
THR 290.0085
VAL 300.0087
SER 310.0109
HIS 320.0121
GLU 330.0100
VAL 340.0088
ALA 350.0065
ASP 360.0069
CYS 370.0051
SER 380.0060
HIS 390.0072
LEU 400.0066
LYS 410.0065
LEU 420.0046
THR 430.0052
GLN 440.0039
VAL 450.0024
PRO 460.0021
ASP 470.0029
ASP 480.0029
LEU 490.0045
PRO 500.0068
THR 510.0080
ASN 520.0098
ILE 530.0084
THR 540.0093
VAL 550.0078
LEU 560.0055
ASN 570.0049
LEU 580.0028
THR 590.0037
HIS 600.0047
ASN 610.0042
GLN 620.0052
LEU 630.0041
ARG 640.0062
ARG 650.0063
LEU 660.0058
PRO 670.0074
ALA 680.0086
ALA 690.0085
ASN 700.0062
PHE 710.0068
THR 720.0088
ARG 730.0078
TYR 740.0077
SER 750.0101
GLN 760.0104
LEU 770.0088
THR 780.0097
SER 790.0076
LEU 800.0054
ASP 810.0041
VAL 820.0023
GLY 830.0020
PHE 840.0029
ASN 850.0034
THR 860.0052
ILE 870.0052
SER 880.0072
LYS 890.0081
LEU 900.0077
GLU 910.0093
PRO 920.0107
GLU 930.0113
LEU 940.0092
CYS 950.0103
GLN 960.0123
LYS 970.0109
LEU 980.0101
PRO 990.0123
MET 1000.0118
LEU 1010.0097
LYS 1020.0097
VAL 1030.0077
LEU 1040.0061
ASN 1050.0042
LEU 1060.0034
GLN 1070.0020
HIS 1080.0023
ASN 1090.0036
GLU 1100.0056
LEU 1110.0059
SER 1120.0068
GLN 1130.0084
LEU 1140.0086
SER 1150.0104
ASP 1160.0116
LYS 1170.0120
THR 1180.0099
PHE 1190.0098
ALA 1200.0119
PHE 1210.0124
CYS 1220.0109
THR 1230.0125
ASN 1240.0119
LEU 1250.0098
THR 1260.0094
GLU 1270.0074
LEU 1280.0062
HIS 1290.0042
LEU 1300.0037
MET 1310.0021
SER 1320.0025
ASN 1330.0039
SER 1340.0050
ILE 1350.0057
GLN 1360.0065
LYS 1370.0075
ILE 1380.0079
LYS 1390.0097
ASN 1400.0110
ASN 1410.0108
PRO 1420.0099
PHE 1430.0095
VAL 1440.0112
LYS 1450.0119
GLN 1460.0106
LYS 1470.0118
ASN 1480.0113
LEU 1490.0094
ILE 1500.0088
THR 1510.0069
LEU 1520.0059
ASP 1530.0042
LEU 1540.0037
SER 1550.0020
HIS 1560.0020
ASN 1570.0034
GLY 1580.0046
LEU 1590.0047
SER 1600.0050
SER 1610.0054
THR 1620.0051
LYS 1630.0068
LEU 1640.0075
GLY 1650.0091
THR 1660.0104
GLN 1670.0110
VAL 1680.0105
GLN 1690.0101
LEU 1700.0093
GLU 1710.0101
ASN 1720.0100
LEU 1730.0082
GLN 1740.0076
GLU 1750.0060
LEU 1760.0049
LEU 1770.0035
LEU 1780.0028
SER 1790.0015
ASN 1800.0015
ASN 1810.0028
LYS 1820.0037
ILE 1830.0033
GLN 1840.0036
ALA 1850.0033
LEU 1860.0033
LYS 1870.0044
SER 1880.0050
GLU 1890.0065
GLU 1900.0061
LEU 1910.0058
ASP 1920.0071
ILE 1930.0080
PHE 1940.0074
ALA 1950.0079
ASN 1960.0091
SER 1970.0081
SER 1980.0077
LEU 1990.0063
LYS 2000.0064
LYS 2010.0048
LEU 2020.0037
GLU 2030.0027
LEU 2040.0017
SER 2050.0010
SER 2060.0011
ASN 2070.0016
GLN 2080.0022
ILE 2090.0020
LYS 2100.0026
GLU 2110.0025
PHE 2120.0018
SER 2130.0027
PRO 2140.0024
GLY 2150.0030
CYS 2160.0033
PHE 2170.0031
HIS 2180.0039
ALA 2190.0051
ILE 2200.0056
GLY 2210.0063
ARG 2220.0058
LEU 2230.0047
PHE 2240.0052
GLY 2250.0042
LEU 2260.0027
PHE 2270.0023
LEU 2280.0014
ASN 2290.0017
ASN 2300.0015
VAL 2310.0014
GLN 2320.0021
LEU 2330.0022
GLY 2340.0029
PRO 2350.0033
SER 2360.0034
LEU 2370.0023
THR 2380.0023
GLU 2390.0027
LYS 2400.0017
LEU 2410.0013
CYS 2420.0022
LEU 2430.0017
GLU 2440.0011
LEU 2450.0022
ALA 2460.0022
ASN 2470.0030
THR 2480.0033
SER 2490.0044
ILE 2500.0039
ARG 2510.0046
ASN 2520.0041
LEU 2530.0031
SER 2540.0028
LEU 2550.0024
SER 2560.0024
ASN 2570.0022
SER 2580.0023
GLN 2590.0028
LEU 2600.0033
SER 2610.0038
THR 2620.0043
THR 2630.0045
SER 2640.0051
ASN 2650.0055
THR 2660.0048
THR 2670.0041
PHE 2680.0040
LEU 2690.0043
GLY 2700.0035
LEU 2710.0037
LYS 2720.0045
TRP 2730.0040
THR 2740.0041
ASN 2750.0048
LEU 2760.0045
THR 2770.0050
MET 2780.0045
LEU 2790.0040
ASP 2800.0035
LEU 2810.0034
SER 2820.0030
TYR 2830.0028
ASN 2840.0031
ASN 2850.0034
LEU 2860.0039
ASN 2870.0043
VAL 2880.0048
VAL 2890.0050
GLY 2900.0056
ASN 2910.0062
ASP 2920.0062
SER 2930.0054
PHE 2940.0053
ALA 2950.0060
TRP 2960.0055
LEU 2970.0053
PRO 2980.0060
GLN 2990.0057
LEU 3000.0052
GLU 3010.0053
TYR 3020.0046
PHE 3030.0044
PHE 3040.0038
LEU 3050.0038
GLU 3060.0032
TYR 3070.0029
ASN 3080.0033
ASN 3090.0036
ILE 3100.0041
GLN 3110.0043
HIS 3120.0048
LEU 3130.0049
PHE 3140.0057
SER 3150.0061
HIS 3160.0065
SER 3170.0057
LEU 3180.0056
HIS 3190.0064
GLY 3200.0065
LEU 3210.0060
PHE 3220.0065
ASN 3230.0062
VAL 3240.0056
ARG 3250.0055
TYR 3260.0048
LEU 3270.0045
ASN 3280.0039
LEU 3290.0038
LYS 3300.0032
ARG 3310.0029
SER 3320.0034
PHE 3330.0035
THR 3340.0035
LYS 3350.0031
GLN 3360.0030
SER 3370.0034
ILE 3380.0032
SER 3390.0039
LEU 3400.0042
ALA 3410.0038
SER 3420.0040
LEU 3430.0037
PRO 3440.0038
LYS 3450.0043
ILE 3460.0047
ASP 3470.0055
ASP 3480.0058
PHE 3490.0061
SER 3500.0057
PHE 3510.0057
GLN 3520.0065
TRP 3530.0066
LEU 3540.0061
LYS 3550.0067
CYS 3560.0065
LEU 3570.0058
GLU 3580.0056
HIS 3590.0050
LEU 3600.0046
ASN 3610.0039
MET 3620.0037
GLU 3630.0031
ASP 3640.0027
ASN 3650.0030
ASP 3660.0030
ILE 3670.0033
PRO 3680.0033
GLY 3690.0034
ILE 3700.0038
LYS 3710.0044
SER 3720.0049
ASN 3730.0054
MET 3740.0049
PHE 3750.0051
THR 3760.0059
GLY 3770.0064
LEU 3780.0061
ILE 3790.0066
ASN 3800.0064
LEU 3810.0057
LYS 3820.0055
TYR 3830.0049
LEU 3840.0044
SER 3850.0038
LEU 3860.0034
SER 3870.0029
ASN 3880.0026
SER 3890.0030
PHE 3900.0029
THR 3910.0031
SER 3920.0027
LEU 3930.0025
ARG 3940.0023
THR 3950.0023
LEU 3960.0024
THR 3970.0025
ASN 3980.0028
GLU 3990.0032
THR 4000.0033
PHE 4010.0038
VAL 4020.0044
SER 4030.0049
LEU 4040.0049
ALA 4050.0053
HIS 4060.0058
SER 4070.0057
PRO 4080.0060
LEU 4090.0053
HIS 4100.0053
ILE 4110.0046
LEU 4120.0040
ASN 4130.0036
LEU 4140.0031
THR 4150.0028
LYS 4160.0025
ASN 4170.0025
LYS 4180.0025
ILE 4190.0024
SER 4200.0027
LYS 4210.0026
ILE 4220.0027
GLU 4230.0027
SER 4240.0030
ASP 4250.0031
ALA 4260.0029
PHE 4270.0035
SER 4280.0040
TRP 4290.0043
LEU 4300.0046
GLY 4310.0048
HIS 4320.0054
LEU 4330.0049
GLU 4340.0052
VAL 4350.0047
LEU 4360.0040
ASP 4370.0036
LEU 4380.0031
GLY 4390.0030
LEU 4400.0028
ASN 4410.0027
GLU 4420.0030
ILE 4430.0031
GLY 4440.0037
GLN 4450.0040
GLU 4460.0047
LEU 4470.0045
THR 4480.0048
GLY 4490.0048
GLN 4500.0043
GLU 4510.0035
TRP 4520.0041
ARG 4530.0042
GLY 4540.0046
LEU 4550.0048
GLU 4560.0052
ASN 4570.0055
ILE 4580.0051
PHE 4590.0055
GLU 4600.0049
ILE 4610.0043
TYR 4620.0040
LEU 4630.0036
SER 4640.0035
TYR 4650.0033
ASN 4660.0033
LYS 4670.0038
TYR 4680.0043
LEU 4690.0045
GLN 4700.0053
LEU 4710.0058
THR 4720.0064
ARG 4730.0071
ASN 4740.0064
SER 4750.0056
PHE 4760.0055
ALA 4770.0060
LEU 4780.0055
VAL 4790.0056
PRO 4800.0065
SER 4810.0060
LEU 4820.0056
GLN 4830.0060
ARG 4840.0055
LEU 4850.0049
MET 4860.0046
LEU 4870.0045
ARG 4880.0042
ARG 4890.0040
VAL 4900.0042
ALA 4910.0049
LEU 4920.0053
LYS 4930.0061
ASN 4940.0068
VAL 4950.0069
ASP 4960.0079
SER 4970.0082
SER 4980.0091
PRO 4990.0089
SER 5000.0080
PRO 5010.0070
PHE 5020.0070
GLN 5030.0079
PRO 5040.0076
LEU 5050.0072
ARG 5060.0080
ASN 5070.0075
LEU 5080.0069
THR 5090.0069
ILE 5100.0061
LEU 5110.0059
ASP 5120.0053
LEU 5130.0054
SER 5140.0050
ASN 5150.0047
ASN 5160.0052
ASN 5170.0056
ILE 5180.0063
ALA 5190.0069
ASN 5200.0076
ILE 5210.0078
ASN 5220.0087
ASP 5230.0092
ASP 5240.0092
MET 5250.0082
LEU 5260.0082
GLU 5270.0091
GLY 5280.0093
LEU 5290.0085
GLU 5300.0090
LYS 5310.0084
LEU 5320.0077
GLU 5330.0075
ILE 5340.0067
LEU 5350.0065
ASP 5360.0058
LEU 5370.0059
GLN 5380.0054
HIS 5390.0052
ASN 5400.0058
ASN 5410.0063
LEU 5420.0068
ALA 5430.0069
ARG 5440.0077
LEU 5450.0081
TRP 5460.0079
LYS 5470.0081
HIS 5480.0090
ALA 5490.0093
ASN 5500.0094
PRO 5510.0105
GLY 5520.0110
GLY 5530.0103
PRO 5540.0093
ILE 5550.0091
TYR 5560.0091
PHE 5570.0086
LEU 5580.0084
LYS 5590.0094
GLY 5600.0098
LEU 5610.0090
SER 5620.0093
HIS 5630.0089
LEU 5640.0082
HIS 5650.0078
ILE 5660.0070
LEU 5670.0068
ASN 5680.0061
LEU 5690.0062
GLU 5700.0056
SER 5710.0054
ASN 5720.0061
GLY 5730.0060
PHE 5740.0063
ASP 5750.0064
GLU 5760.0070
ILE 5770.0074
PRO 5780.0083
VAL 5790.0088
GLU 5800.0093
VAL 5810.0085
PHE 5820.0084
LYS 5830.0093
ASP 5840.0096
LEU 5850.0088
PHE 5860.0089
GLU 5870.0087
LEU 5880.0081
LYS 5890.0077
ILE 5900.0073
ILE 5910.0068
ASP 5920.0062
LEU 5930.0061
GLY 5940.0056
LEU 5950.0055
ASN 5960.0059
ASN 5970.0060
LEU 5980.0059
ASN 5990.0057
THR 6000.0061
LEU 6010.0066
PRO 6020.0073
ALA 6030.0077
SER 6040.0082
VAL 6050.0079
PHE 6060.0078
ASN 6070.0085
ASN 6080.0090
GLN 6090.0084
VAL 6100.0089
SER 6110.0085
LEU 6120.0078
LYS 6130.0074
SER 6140.0067
LEU 6150.0064
ASN 6160.0059
LEU 6170.0058
GLN 6180.0055
LYS 6190.0056
ASN 6200.0057
LEU 6210.0058
ILE 6220.0055
THR 6230.0054
SER 6240.0055
VAL 6250.0056
GLU 6260.0060
LYS 6270.0066
LYS 6280.0069
VAL 6290.0068
PHE 6300.0066
GLY 6310.0070
PRO 6320.0077
ALA 6330.0072
PHE 6340.0069
ARG 6350.0076
ASN 6360.0076
LEU 6370.0070
THR 6380.0069
GLU 6390.0063
LEU 6400.0059
ASP 6410.0056
MET 6420.0055
ARG 6430.0056
PHE 6440.0058
ASN 6450.0057
PRO 6460.0060
PHE 6470.0057
ASP 6480.0057
CYS 6490.0060
THR 6500.0059
CYS 6510.0060
GLU 6520.0056
SER 6530.0055
ILE 6540.0056
ALA 6550.0060
TRP 6560.0059
PHE 6570.0057
VAL 6580.0059
ASN 6590.0063
TRP 6600.0062
ILE 6610.0059
ASN 6620.0062
GLU 6630.0061
THR 6640.0056
HIS 6650.0055
THR 6660.0063
ASN 6670.0060
ILE 6680.0057
PRO 6690.0056
GLU 6700.0057
LEU 6710.0058
SER 6720.0062
SER 6730.0063
HIS 6740.0060
TYR 6750.0059
LEU 6760.0063
CYS 6770.0063
ASN 6780.0066
THR 6790.0065
PRO 6800.0068
PRO 6810.0078
HIS 6820.0080
TYR 6830.0073
HIS 6840.0075
GLY 6850.0075
PHE 6860.0073
PRO 6870.0066
VAL 6880.0062
ARG 6890.0063
LEU 6900.0070
PHE 6910.0069
ASP 6920.0074
THR 6930.0071
SER 6940.0079
SER 6950.0076
CYS 6960.0070
GLU 10.0056
ALA 20.0055
ALA 30.0050
ALA 40.0046
LYS 50.0047
MET 60.0044
GLN 70.0038
ARG 80.0038
LEU 90.0038
VAL 100.0034
LEU 110.0029
LEU 120.0030
LEU 130.0028
ALA 140.0025
ILE 150.0024
SER 160.0024
LEU 170.0025
LEU 180.0020
LEU 190.0021
TYR 200.0027
GLN 210.0029
ASP 220.0025
LEU 230.0039
PRO 240.0049
VAL 250.0054
ARG 260.0077
SER 270.0110
GLU 280.0106
PHE 290.0141
GLU 300.0160
LEU 310.0154
ASP 320.0137
ARG 330.0160
ILE 340.0173
CYS 350.0166
GLY 360.0178
TYR 370.0201
GLY 380.0206
THR 390.0206
ALA 400.0180
ARG 410.0167
CYS 420.0144
ARG 430.0134
LYS 440.0113
LYS 450.0113
CYS 460.0131
ARG 470.0143
SER 480.0144
GLN 490.0158
GLU 500.0151
TYR 510.0140
ARG 520.0126
ILE 530.0141
GLY 540.0127
ARG 550.0113
CYS 560.0120
PRO 570.0110
ASN 580.0101
THR 590.0087
TYR 600.0104
ALA 610.0119
CYS 620.0139
CYS 630.0142
LEU 640.0157
ARG 650.0162
LYS 660.0169
TRP 670.0152
ASP 680.0145
GLU 690.0144
SER 700.0129
LEU 710.0114
LEU 720.0124
ASN 730.0111
ARG 740.0089
THR 750.0098
LYS 760.0099
PRO 770.0093
GLU 780.0077
ALA 790.0100
ALA 800.0115
ALA 810.0108
LYS 820.0122
LYS 830.0104
GLU 840.0107
MET 850.0106
ASN 860.0109
LEU 870.0118
SER 880.0125
VAL 890.0146
GLY 900.0157
LEU 910.0189
GLY 920.0208
GLY 930.0233
GLY 940.0210
SER 950.0203
ASN 960.0171
LEU 970.0173
SER 980.0151
VAL 990.0156
GLY 1000.0148
LEU 1010.0168
GLY 1020.0199
GLU 1030.0220
ILE 1040.0272
GLY 1050.0306
GLY 1060.0312
GLY 1070.0277
SER 1080.0233
LYS 1090.0213
LEU 1100.0186
LEU 1110.0172
ASP 1120.0192
ILE 1130.0183
ASN 1140.0212
LEU 1150.0209
GLY 1160.0229
ARG 1170.0254
GLY 1180.0249
GLY 1190.0247
GLY 1200.0231
SER 1210.0202
MET 1220.0172
VAL 1230.0152
ASP 1240.0125
LEU 1250.0110
THR 1260.0095
PHE 1270.0085
GLY 1280.0082
GLY 1290.0087
VAL 1300.0099
GLY 1310.0092
GLY 1320.0094
GLY 1330.0093
SER 1340.0091
THR 1350.0088
PHE 1360.0094
THR 1370.0102
PHE 1380.0103
PHE 1390.0116
PRO 1400.0123
LEU 1410.0134
VAL 1420.0125
ILE 1430.0133
GLY 1440.0131
GLY 1450.0129
GLY 1460.0206
SER 1470.0212
ASP 1480.0199
ALA 1490.0191
MET 1500.0159
TYR 1510.0155
LEU 1520.0136
GLY 1530.0137
PHE 1540.0124
ALA 1550.0130
ALA 1560.0108
GLY 1570.0108
GLY 1580.0111
GLY 1590.0099
SER 1600.0088
ALA 1610.0089
GLY 1620.0090
GLY 1630.0085
GLU 1640.0083
ASN 1650.0084
HIS 1660.0092
VAL 1670.0103
ALA 1680.0120
PHE 1690.0141
GLY 1700.0158
PRO 1710.0192
GLY 1720.0172
PRO 1730.0160
GLY 1740.0131
VAL 1750.0124
ASP 1760.0109
LEU 1770.0094
THR 1780.0087
PHE 1790.0081
GLY 1800.0085
GLY 1810.0088
VAL 1820.0084
GLN 1830.0087
PHE 1840.0086
ALA 1850.0096
MET 1860.0106
VAL 1870.0096
ASN 1880.0113
ASN 1890.0114
GLY 1900.0128
PRO 1910.0134
GLY 1920.0093
PRO 1930.0075
GLY 1940.0108
GLU 1950.0138
SER 1960.0114
PHE 1970.0108
THR 1980.0125
ALA 1990.0162
GLN 2000.0208
PRO 2010.0302
ALA 2020.0258
ASP 2030.0101
MET 2040.0207
GLN 2050.0175
ALA 2060.0200
GLY 2070.0207
ILE 2080.0163
LYS 2090.0171
GLY 2100.0164
PRO 2110.0126
GLY 2120.0114
PRO 2130.0092
GLY 2140.0085
GLY 2150.0102
SER 2160.0101
ILE 2170.0104
GLN 2180.0100
VAL 2190.0100
ILE 2200.0101
ASN 2210.0139
GLY 2220.0115
SER 2230.0144
THR 2240.0243
ILE 2250.0328
GLY 2260.0449
THR 2270.0552
GLY 2280.0581
SER 2290.0584
LYS 2300.0474
LYS 2310.0338
THR 2320.0259
ILE 2330.0189
LEU 2340.0133
ILE 2350.0114
TYR 2360.0151
SER 2370.0208
ILE 2380.0247
ILE 2390.0274
GLY 2400.0325
VAL 2410.0258
LYS 2420.0202
LYS 2430.0170
GLY 2440.0179
THR 2450.0170
LEU 2460.0199
ALA 2470.0219
TRP 2480.0189
ALA 2490.0227
ARG 2500.0210
THR 2510.0246
GLY 2520.0301
PHE 2530.0256
SER 2540.0348
PRO 2550.0349
ALA 2560.0348
LYS 2570.0415
LYS 2580.0413
LEU 2590.0345
ASN 2600.0409
ALA 2610.0365
GLY 2620.0275
VAL 2630.0206
VAL 2640.0159
ARG 2650.0121
VAL 2660.0141
PHE 2670.0175
PHE 2680.0193
LEU 2690.0218
ASN 2700.0280
GLN 2710.0340
LYS 2720.0335
LYS 2730.0245
ALA 2740.0259
LYS 2750.0313
ASP 2760.0238
VAL 2770.0214
LEU 2780.0315
ARG 2790.0348
LYS 2800.0279
THR 2810.0339
SER 2820.0421
ARG 2830.0308
PRO 2840.0344
MET 2850.0303
VAL 2860.0226
ASP 2870.0127
LEU 2880.0131
THR 2890.0103
PHE 2900.0216
GLY 2910.0362
GLY 2920.0517

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.