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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0986
THR 260.0016
LYS 270.0024
CYS 280.0031
THR 290.0031
VAL 300.0039
SER 310.0040
HIS 320.0050
GLU 330.0054
VAL 340.0052
ALA 350.0046
ASP 360.0044
CYS 370.0042
SER 380.0040
HIS 390.0035
LEU 400.0033
LYS 410.0040
LEU 420.0041
THR 430.0038
GLN 440.0041
VAL 450.0044
PRO 460.0044
ASP 470.0047
ASP 480.0050
LEU 490.0050
PRO 500.0054
THR 510.0057
ASN 520.0059
ILE 530.0055
THR 540.0054
VAL 550.0051
LEU 560.0050
ASN 570.0049
LEU 580.0048
THR 590.0047
HIS 600.0045
ASN 610.0043
GLN 620.0040
LEU 630.0038
ARG 640.0034
ARG 650.0033
LEU 660.0035
PRO 670.0037
ALA 680.0036
ALA 690.0042
ASN 700.0044
PHE 710.0044
THR 720.0046
ARG 730.0050
TYR 740.0049
SER 750.0048
GLN 760.0050
LEU 770.0047
THR 780.0045
SER 790.0044
LEU 800.0041
ASP 810.0043
VAL 820.0041
GLY 830.0040
PHE 840.0039
ASN 850.0039
THR 860.0033
ILE 870.0030
SER 880.0024
LYS 890.0023
LEU 900.0023
GLU 910.0023
PRO 920.0018
GLU 930.0024
LEU 940.0028
CYS 950.0023
GLN 960.0025
LYS 970.0033
LEU 980.0034
PRO 990.0030
MET 1000.0035
LEU 1010.0031
LYS 1020.0033
VAL 1030.0035
LEU 1040.0029
ASN 1050.0032
LEU 1060.0026
GLN 1070.0029
HIS 1080.0030
ASN 1090.0028
GLU 1100.0023
LEU 1110.0017
SER 1120.0011
GLN 1130.0010
LEU 1140.0009
SER 1150.0011
ASP 1160.0014
LYS 1170.0011
THR 1180.0009
PHE 1190.0011
ALA 1200.0010
PHE 1210.0009
CYS 1220.0015
THR 1230.0018
ASN 1240.0025
LEU 1250.0027
THR 1260.0034
GLU 1270.0034
LEU 1280.0026
HIS 1290.0027
LEU 1300.0019
MET 1310.0024
SER 1320.0022
ASN 1330.0017
SER 1340.0013
ILE 1350.0009
GLN 1360.0010
LYS 1370.0015
ILE 1380.0017
LYS 1390.0021
ASN 1400.0025
ASN 1410.0025
PRO 1420.0018
PHE 1430.0023
VAL 1440.0028
LYS 1450.0024
GLN 1460.0027
LYS 1470.0035
ASN 1480.0037
LEU 1490.0035
ILE 1500.0042
THR 1510.0039
LEU 1520.0032
ASP 1530.0030
LEU 1540.0023
SER 1550.0025
HIS 1560.0022
ASN 1570.0016
GLY 1580.0013
LEU 1590.0017
SER 1600.0020
SER 1610.0026
THR 1620.0030
LYS 1630.0032
LEU 1640.0030
GLY 1650.0034
THR 1660.0040
GLN 1670.0045
VAL 1680.0048
GLN 1690.0043
LEU 1700.0041
GLU 1710.0051
ASN 1720.0051
LEU 1730.0046
GLN 1740.0050
GLU 1750.0044
LEU 1760.0039
LEU 1770.0035
LEU 1780.0030
SER 1790.0029
ASN 1800.0023
ASN 1810.0019
LYS 1820.0017
ILE 1830.0022
GLN 1840.0021
ALA 1850.0026
LEU 1860.0030
LYS 1870.0035
SER 1880.0041
GLU 1890.0042
GLU 1900.0038
LEU 1910.0041
ASP 1920.0047
ILE 1930.0046
PHE 1940.0048
ALA 1950.0055
ASN 1960.0060
SER 1970.0055
SER 1980.0058
LEU 1990.0051
LYS 2000.0054
LYS 2010.0047
LEU 2020.0042
GLU 2030.0037
LEU 2040.0031
SER 2050.0029
SER 2060.0022
ASN 2070.0020
GLN 2080.0015
ILE 2090.0019
LYS 2100.0017
GLU 2110.0021
PHE 2120.0026
SER 2130.0032
PRO 2140.0035
GLY 2150.0040
CYS 2160.0039
PHE 2170.0040
HIS 2180.0046
ALA 2190.0049
ILE 2200.0050
GLY 2210.0058
ARG 2220.0057
LEU 2230.0051
PHE 2240.0053
GLY 2250.0047
LEU 2260.0038
PHE 2270.0036
LEU 2280.0027
ASN 2290.0029
ASN 2300.0025
VAL 2310.0019
GLN 2320.0012
LEU 2330.0009
GLY 2340.0007
PRO 2350.0005
SER 2360.0005
LEU 2370.0009
THR 2380.0012
GLU 2390.0011
LYS 2400.0017
LEU 2410.0021
CYS 2420.0023
LEU 2430.0026
GLU 2440.0031
LEU 2450.0033
ALA 2460.0035
ASN 2470.0044
THR 2480.0045
SER 2490.0050
ILE 2500.0044
ARG 2510.0044
ASN 2520.0042
LEU 2530.0034
SER 2540.0034
LEU 2550.0026
SER 2560.0034
ASN 2570.0033
SER 2580.0024
GLN 2590.0025
LEU 2600.0021
SER 2610.0030
THR 2620.0026
THR 2630.0021
SER 2640.0016
ASN 2650.0011
THR 2660.0007
THR 2670.0008
PHE 2680.0014
LEU 2690.0012
GLY 2700.0019
LEU 2710.0023
LYS 2720.0023
TRP 2730.0031
THR 2740.0034
ASN 2750.0038
LEU 2760.0032
THR 2770.0038
MET 2780.0039
LEU 2790.0032
ASP 2800.0036
LEU 2810.0033
SER 2820.0042
TYR 2830.0045
ASN 2840.0039
ASN 2850.0043
LEU 2860.0040
ASN 2870.0042
VAL 2880.0036
VAL 2890.0030
GLY 2900.0026
ASN 2910.0021
ASP 2920.0016
SER 2930.0018
PHE 2940.0019
ALA 2950.0014
TRP 2960.0014
LEU 2970.0020
PRO 2980.0023
GLN 2990.0030
LEU 3000.0031
GLU 3010.0036
TYR 3020.0039
PHE 3030.0036
PHE 3040.0040
LEU 3050.0040
GLU 3060.0048
TYR 3070.0053
ASN 3080.0049
ASN 3090.0051
ILE 3100.0045
GLN 3110.0047
HIS 3120.0042
LEU 3130.0037
PHE 3140.0033
SER 3150.0028
HIS 3160.0024
SER 3170.0026
LEU 3180.0026
HIS 3190.0020
GLY 3200.0018
LEU 3210.0023
PHE 3220.0023
ASN 3230.0028
VAL 3240.0031
ARG 3250.0036
TYR 3260.0040
LEU 3270.0039
ASN 3280.0044
LEU 3290.0045
LYS 3300.0051
ARG 3310.0055
SER 3320.0049
PHE 3330.0050
THR 3340.0056
LYS 3350.0062
GLN 3360.0065
SER 3370.0073
ILE 3380.0075
SER 3390.0081
LEU 3400.0076
ALA 3410.0067
SER 3420.0062
LEU 3430.0056
PRO 3440.0049
LYS 3450.0042
ILE 3460.0038
ASP 3470.0035
ASP 3480.0031
PHE 3490.0028
SER 3500.0030
PHE 3510.0029
GLN 3520.0025
TRP 3530.0023
LEU 3540.0027
LYS 3550.0025
CYS 3560.0028
LEU 3570.0031
GLU 3580.0034
HIS 3590.0038
LEU 3600.0039
ASN 3610.0043
MET 3620.0044
GLU 3630.0049
ASP 3640.0053
ASN 3650.0051
ASP 3660.0051
ILE 3670.0045
PRO 3680.0043
GLY 3690.0037
ILE 3700.0033
LYS 3710.0032
SER 3720.0028
ASN 3730.0028
MET 3740.0031
PHE 3750.0029
THR 3760.0027
GLY 3770.0026
LEU 3780.0027
ILE 3790.0025
ASN 3800.0027
LEU 3810.0030
LYS 3820.0031
TYR 3830.0034
LEU 3840.0034
SER 3850.0038
LEU 3860.0039
SER 3870.0041
ASN 3880.0044
SER 3890.0043
PHE 3900.0041
THR 3910.0043
SER 3920.0034
LEU 3930.0030
ARG 3940.0023
THR 3950.0022
LEU 3960.0020
THR 3970.0021
ASN 3980.0020
GLU 3990.0025
THR 4000.0025
PHE 4010.0024
VAL 4020.0025
SER 4030.0027
LEU 4040.0025
ALA 4050.0023
HIS 4060.0024
SER 4070.0025
PRO 4080.0024
LEU 4090.0025
HIS 4100.0025
ILE 4110.0027
LEU 4120.0026
ASN 4130.0029
LEU 4140.0028
THR 4150.0030
LYS 4160.0032
ASN 4170.0030
LYS 4180.0025
ILE 4190.0022
SER 4200.0018
LYS 4210.0016
ILE 4220.0015
GLU 4230.0017
SER 4240.0016
ASP 4250.0015
ALA 4260.0017
PHE 4270.0017
SER 4280.0016
TRP 4290.0018
LEU 4300.0018
GLY 4310.0016
HIS 4320.0018
LEU 4330.0018
GLU 4340.0019
VAL 4350.0020
LEU 4360.0018
ASP 4370.0020
LEU 4380.0018
GLY 4390.0021
LEU 4400.0022
ASN 4410.0020
GLU 4420.0016
ILE 4430.0015
GLY 4440.0015
GLN 4450.0016
GLU 4460.0018
LEU 4470.0017
THR 4480.0017
GLY 4490.0016
GLN 4500.0014
GLU 4510.0013
TRP 4520.0013
ARG 4530.0013
GLY 4540.0012
LEU 4550.0013
GLU 4560.0014
ASN 4570.0016
ILE 4580.0016
PHE 4590.0019
GLU 4600.0018
ILE 4610.0016
TYR 4620.0017
LEU 4630.0017
SER 4640.0020
TYR 4650.0020
ASN 4660.0018
LYS 4670.0018
TYR 4680.0020
LEU 4690.0019
GLN 4700.0021
LEU 4710.0021
THR 4720.0021
ARG 4730.0020
ASN 4740.0018
SER 4750.0018
PHE 4760.0018
ALA 4770.0017
LEU 4780.0015
VAL 4790.0015
PRO 4800.0018
SER 4810.0017
LEU 4820.0018
GLN 4830.0018
ARG 4840.0019
LEU 4850.0019
MET 4860.0020
LEU 4870.0022
ARG 4880.0024
ARG 4890.0025
VAL 4900.0024
ALA 4910.0026
LEU 4920.0025
LYS 4930.0026
ASN 4940.0026
VAL 4950.0025
ASP 4960.0024
SER 4970.0023
SER 4980.0023
PRO 4990.0022
SER 5000.0021
PRO 5010.0022
PHE 5020.0021
GLN 5030.0020
PRO 5040.0019
LEU 5050.0019
ARG 5060.0026
ASN 5070.0026
LEU 5080.0023
THR 5090.0020
ILE 5100.0018
LEU 5110.0022
ASP 5120.0025
LEU 5130.0027
SER 5140.0029
ASN 5150.0032
ASN 5160.0034
ASN 5170.0035
ILE 5180.0032
ALA 5190.0033
ASN 5200.0031
ILE 5210.0025
ASN 5220.0024
ASP 5230.0021
ASP 5240.0020
MET 5250.0021
LEU 5260.0017
GLU 5270.0015
GLY 5280.0015
LEU 5290.0015
GLU 5300.0012
LYS 5310.0014
LEU 5320.0015
GLU 5330.0018
ILE 5340.0022
LEU 5350.0018
ASP 5360.0024
LEU 5370.0026
GLN 5380.0030
HIS 5390.0036
ASN 5400.0036
ASN 5410.0038
LEU 5420.0033
ALA 5430.0033
ARG 5440.0039
LEU 5450.0035
TRP 5460.0032
LYS 5470.0039
HIS 5480.0044
ALA 5490.0052
ASN 5500.0050
PRO 5510.0056
GLY 5520.0052
GLY 5530.0046
PRO 5540.0036
ILE 5550.0029
TYR 5560.0024
PHE 5570.0021
LEU 5580.0014
LYS 5590.0016
GLY 5600.0016
LEU 5610.0008
SER 5620.0017
HIS 5630.0020
LEU 5640.0017
HIS 5650.0026
ILE 5660.0024
LEU 5670.0017
ASN 5680.0023
LEU 5690.0022
GLU 5700.0028
SER 5710.0035
ASN 5720.0034
GLY 5730.0036
PHE 5740.0030
ASP 5750.0033
GLU 5760.0031
ILE 5770.0027
PRO 5780.0032
VAL 5790.0034
GLU 5800.0033
VAL 5810.0024
PHE 5820.0022
LYS 5830.0030
ASP 5840.0029
LEU 5850.0024
PHE 5860.0039
GLU 5870.0039
LEU 5880.0030
LYS 5890.0036
ILE 5900.0030
ILE 5910.0019
ASP 5920.0022
LEU 5930.0019
GLY 5940.0026
LEU 5950.0034
ASN 5960.0031
ASN 5970.0034
LEU 5980.0027
ASN 5990.0028
THR 6000.0033
LEU 6010.0030
PRO 6020.0039
ALA 6030.0044
SER 6040.0044
VAL 6050.0034
PHE 6060.0034
ASN 6070.0046
ASN 6080.0045
GLN 6090.0039
VAL 6100.0051
SER 6110.0049
LEU 6120.0041
LYS 6130.0045
SER 6140.0037
LEU 6150.0027
ASN 6160.0025
LEU 6170.0020
GLN 6180.0028
LYS 6190.0033
ASN 6200.0028
LEU 6210.0030
ILE 6220.0022
THR 6230.0023
SER 6240.0025
VAL 6250.0025
GLU 6260.0035
LYS 6270.0043
LYS 6280.0047
VAL 6290.0037
PHE 6300.0034
GLY 6310.0046
PRO 6320.0049
ALA 6330.0039
PHE 6340.0043
ARG 6350.0055
ASN 6360.0057
LEU 6370.0049
THR 6380.0055
GLU 6390.0046
LEU 6400.0036
ASP 6410.0032
MET 6420.0024
ARG 6430.0032
PHE 6440.0034
ASN 6450.0026
PRO 6460.0028
PHE 6470.0020
ASP 6480.0022
CYS 6490.0019
THR 6500.0027
CYS 6510.0036
GLU 6520.0040
SER 6530.0030
ILE 6540.0026
ALA 6550.0036
TRP 6560.0039
PHE 6570.0032
VAL 6580.0035
ASN 6590.0045
TRP 6600.0045
ILE 6610.0043
ASN 6620.0048
GLU 6630.0050
THR 6640.0048
HIS 6650.0050
THR 6660.0053
ASN 6670.0054
ILE 6680.0046
PRO 6690.0050
GLU 6700.0051
LEU 6710.0045
SER 6720.0048
SER 6730.0050
HIS 6740.0042
TYR 6750.0032
LEU 6760.0031
CYS 6770.0024
ASN 6780.0030
THR 6790.0031
PRO 6800.0029
PRO 6810.0034
HIS 6820.0025
TYR 6830.0022
HIS 6840.0032
GLY 6850.0038
PHE 6860.0031
PRO 6870.0033
VAL 6880.0027
ARG 6890.0036
LEU 6900.0036
PHE 6910.0029
ASP 6920.0036
THR 6930.0043
SER 6940.0053
SER 6950.0046
CYS 6960.0050
GLU 10.0079
ALA 20.0086
ALA 30.0085
ALA 40.0075
LYS 50.0076
MET 60.0082
GLN 70.0078
ARG 80.0069
LEU 90.0075
VAL 100.0081
LEU 110.0072
LEU 120.0069
LEU 130.0077
ALA 140.0078
ILE 150.0071
SER 160.0076
LEU 170.0072
LEU 180.0071
LEU 190.0073
TYR 200.0074
GLN 210.0060
ASP 220.0067
LEU 230.0081
PRO 240.0076
VAL 250.0077
ARG 260.0117
SER 270.0115
GLU 280.0110
PHE 290.0108
GLU 300.0110
LEU 310.0107
ASP 320.0089
ARG 330.0080
ILE 340.0088
CYS 350.0082
GLY 360.0089
TYR 370.0114
GLY 380.0107
THR 390.0091
ALA 400.0069
ARG 410.0062
CYS 420.0054
ARG 430.0037
LYS 440.0024
LYS 450.0014
CYS 460.0018
ARG 470.0022
SER 480.0024
GLN 490.0032
GLU 500.0028
TYR 510.0023
ARG 520.0033
ILE 530.0052
GLY 540.0060
ARG 550.0059
CYS 560.0066
PRO 570.0078
ASN 580.0060
THR 590.0056
TYR 600.0040
ALA 610.0040
CYS 620.0050
CYS 630.0039
LEU 640.0046
ARG 650.0044
LYS 660.0039
TRP 670.0039
ASP 680.0038
GLU 690.0041
SER 700.0039
LEU 710.0036
LEU 720.0040
ASN 730.0035
ARG 740.0026
THR 750.0030
LYS 760.0033
PRO 770.0032
GLU 780.0019
ALA 790.0035
ALA 800.0054
ALA 810.0072
LYS 820.0083
LYS 830.0082
GLU 840.0062
MET 850.0074
ASN 860.0042
LEU 870.0036
SER 880.0023
VAL 890.0017
GLY 900.0032
LEU 910.0040
GLY 920.0065
GLY 930.0085
GLY 940.0073
SER 950.0054
ASN 960.0038
LEU 970.0032
SER 980.0023
VAL 990.0040
GLY 1000.0052
LEU 1010.0084
GLY 1020.0142
GLU 1030.0195
ILE 1040.0254
GLY 1050.0316
GLY 1060.0347
GLY 1070.0270
SER 1080.0193
LYS 1090.0131
LEU 1100.0061
LEU 1110.0050
ASP 1120.0051
ILE 1130.0040
ASN 1140.0055
LEU 1150.0051
GLY 1160.0066
ARG 1170.0083
GLY 1180.0068
GLY 1190.0076
GLY 1200.0071
SER 1210.0043
MET 1220.0031
VAL 1230.0017
ASP 1240.0038
LEU 1250.0049
THR 1260.0062
PHE 1270.0071
GLY 1280.0077
GLY 1290.0091
VAL 1300.0098
GLY 1310.0089
GLY 1320.0088
GLY 1330.0085
SER 1340.0087
THR 1350.0085
PHE 1360.0087
THR 1370.0091
PHE 1380.0087
PHE 1390.0090
PRO 1400.0087
LEU 1410.0093
VAL 1420.0101
ILE 1430.0058
GLY 1440.0053
GLY 1450.0050
GLY 1460.0052
SER 1470.0053
ASP 1480.0052
ALA 1490.0041
MET 1500.0038
TYR 1510.0039
LEU 1520.0047
GLY 1530.0062
PHE 1540.0076
ALA 1550.0091
ALA 1560.0081
GLY 1570.0079
GLY 1580.0077
GLY 1590.0076
SER 1600.0076
ALA 1610.0097
GLY 1620.0095
GLY 1630.0093
GLU 1640.0090
ASN 1650.0090
HIS 1660.0077
VAL 1670.0060
ALA 1680.0044
PHE 1690.0023
GLY 1700.0016
PRO 1710.0108
GLY 1720.0063
PRO 1730.0068
GLY 1740.0050
VAL 1750.0059
ASP 1760.0090
LEU 1770.0101
THR 1780.0113
PHE 1790.0127
GLY 1800.0145
GLY 1810.0181
VAL 1820.0195
GLN 1830.0178
PHE 1840.0181
ALA 1850.0183
MET 1860.0195
VAL 1870.0262
ASN 1880.0299
ASN 1890.0465
GLY 1900.0526
PRO 1910.0800
GLY 1920.0986
PRO 1930.0797
GLY 1940.0413
GLU 1950.0362
SER 1960.0418
PHE 1970.0555
THR 1980.0608
ALA 1990.0857
GLN 2000.0986
PRO 2010.0921
ALA 2020.0685
ASP 2030.0758
MET 2040.0754
GLN 2050.0545
ALA 2060.0748
GLY 2070.0661
ILE 2080.0516
LYS 2090.0404
GLY 2100.0377
PRO 2110.0154
GLY 2120.0130
PRO 2130.0050
GLY 2140.0065
GLY 2150.0031
SER 2160.0085
ILE 2170.0124
GLN 2180.0176
VAL 2190.0214
ILE 2200.0270
ASN 2210.0254
GLY 2220.0183
SER 2230.0140
THR 2240.0111
ILE 2250.0045
GLY 2260.0093
THR 2270.0178
GLY 2280.0220
SER 2290.0266
LYS 2300.0200
LYS 2310.0129
THR 2320.0083
ILE 2330.0084
LEU 2340.0064
ILE 2350.0112
TYR 2360.0139
SER 2370.0121
ILE 2380.0142
ILE 2390.0101
GLY 2400.0127
VAL 2410.0155
LYS 2420.0137
LYS 2430.0180
GLY 2440.0239
THR 2450.0225
LEU 2460.0224
ALA 2470.0177
TRP 2480.0153
ALA 2490.0101
ARG 2500.0076
THR 2510.0049
GLY 2520.0056
PHE 2530.0059
SER 2540.0110
PRO 2550.0134
ALA 2560.0161
LYS 2570.0204
LYS 2580.0215
LEU 2590.0173
ASN 2600.0216
ALA 2610.0189
GLY 2620.0136
VAL 2630.0123
VAL 2640.0078
ARG 2650.0069
VAL 2660.0069
PHE 2670.0082
PHE 2680.0076
LEU 2690.0092
ASN 2700.0101
GLN 2710.0142
LYS 2720.0150
LYS 2730.0113
ALA 2740.0123
LYS 2750.0158
ASP 2760.0117
VAL 2770.0097
LEU 2780.0158
ARG 2790.0157
LYS 2800.0107
THR 2810.0162
SER 2820.0220
ARG 2830.0161
PRO 2840.0192
MET 2850.0197
VAL 2860.0089
ASP 2870.0107
LEU 2880.0115
THR 2890.0108
PHE 2900.0054
GLY 2910.0085
GLY 2920.0102

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.