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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 44  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0614
THR 260.0042
LYS 270.0043
CYS 280.0039
THR 290.0041
VAL 300.0046
SER 310.0047
HIS 320.0051
GLU 330.0047
VAL 340.0040
ALA 350.0036
ASP 360.0031
CYS 370.0029
SER 380.0022
HIS 390.0021
LEU 400.0028
LYS 410.0022
LEU 420.0021
THR 430.0018
GLN 440.0020
VAL 450.0023
PRO 460.0031
ASP 470.0035
ASP 480.0042
LEU 490.0042
PRO 500.0048
THR 510.0045
ASN 520.0049
ILE 530.0043
THR 540.0042
VAL 550.0036
LEU 560.0028
ASN 570.0023
LEU 580.0018
THR 590.0013
HIS 600.0011
ASN 610.0013
GLN 620.0011
LEU 630.0006
ARG 640.0002
ARG 650.0010
LEU 660.0012
PRO 670.0013
ALA 680.0021
ALA 690.0021
ASN 700.0022
PHE 710.0025
THR 720.0029
ARG 730.0034
TYR 740.0036
SER 750.0040
GLN 760.0040
LEU 770.0034
THR 780.0038
SER 790.0031
LEU 800.0022
ASP 810.0017
VAL 820.0012
GLY 830.0008
PHE 840.0003
ASN 850.0001
THR 860.0006
ILE 870.0011
SER 880.0018
LYS 890.0023
LEU 900.0025
GLU 910.0027
PRO 920.0034
GLU 930.0035
LEU 940.0031
CYS 950.0037
GLN 960.0039
LYS 970.0036
LEU 980.0036
PRO 990.0043
MET 1000.0043
LEU 1010.0035
LYS 1020.0035
VAL 1030.0029
LEU 1040.0024
ASN 1050.0017
LEU 1060.0015
GLN 1070.0009
HIS 1080.0006
ASN 1090.0010
GLU 1100.0016
LEU 1110.0023
SER 1120.0028
GLN 1130.0035
LEU 1140.0036
SER 1150.0044
ASP 1160.0047
LYS 1170.0048
THR 1180.0040
PHE 1190.0038
ALA 1200.0047
PHE 1210.0047
CYS 1220.0041
THR 1230.0045
ASN 1240.0043
LEU 1250.0035
THR 1260.0029
GLU 1270.0022
LEU 1280.0020
HIS 1290.0014
LEU 1300.0015
MET 1310.0010
SER 1320.0012
ASN 1330.0017
SER 1340.0023
ILE 1350.0026
GLN 1360.0034
LYS 1370.0038
ILE 1380.0036
LYS 1390.0045
ASN 1400.0048
ASN 1410.0043
PRO 1420.0039
PHE 1430.0033
VAL 1440.0038
LYS 1450.0042
GLN 1460.0035
LYS 1470.0034
ASN 1480.0033
LEU 1490.0025
ILE 1500.0020
THR 1510.0015
LEU 1520.0013
ASP 1530.0009
LEU 1540.0012
SER 1550.0010
HIS 1560.0014
ASN 1570.0020
GLY 1580.0028
LEU 1590.0027
SER 1600.0033
SER 1610.0034
THR 1620.0026
LYS 1630.0030
LEU 1640.0026
GLY 1650.0033
THR 1660.0041
GLN 1670.0036
VAL 1680.0026
GLN 1690.0023
LEU 1700.0018
GLU 1710.0013
ASN 1720.0017
LEU 1730.0012
GLN 1740.0016
GLU 1750.0016
LEU 1760.0010
LEU 1770.0011
LEU 1780.0014
SER 1790.0017
ASN 1800.0019
ASN 1810.0023
LYS 1820.0030
ILE 1830.0031
GLN 1840.0039
ALA 1850.0040
LEU 1860.0040
LYS 1870.0043
SER 1880.0039
GLU 1890.0038
GLU 1900.0031
LEU 1910.0027
ASP 1920.0028
ILE 1930.0021
PHE 1940.0015
ALA 1950.0018
ASN 1960.0013
SER 1970.0013
SER 1980.0023
LEU 1990.0024
LYS 2000.0034
LYS 2010.0030
LEU 2020.0025
GLU 2030.0024
LEU 2040.0025
SER 2050.0027
SER 2060.0024
ASN 2070.0026
GLN 2080.0034
ILE 2090.0037
LYS 2100.0045
GLU 2110.0050
PHE 2120.0048
SER 2130.0052
PRO 2140.0057
GLY 2150.0052
CYS 2160.0044
PHE 2170.0041
HIS 2180.0044
ALA 2190.0034
ILE 2200.0028
GLY 2210.0032
ARG 2220.0039
LEU 2230.0040
PHE 2240.0048
GLY 2250.0046
LEU 2260.0041
PHE 2270.0037
LEU 2280.0036
ASN 2290.0033
ASN 2300.0029
VAL 2310.0031
GLN 2320.0033
LEU 2330.0040
GLY 2340.0044
PRO 2350.0052
SER 2360.0060
LEU 2370.0053
THR 2380.0053
GLU 2390.0063
LYS 2400.0060
LEU 2410.0056
CYS 2420.0064
LEU 2430.0069
GLU 2440.0059
LEU 2450.0059
ALA 2460.0070
ASN 2470.0073
THR 2480.0064
SER 2490.0064
ILE 2500.0060
ARG 2510.0067
ASN 2520.0059
LEU 2530.0054
SER 2540.0046
LEU 2550.0043
SER 2560.0038
ASN 2570.0030
SER 2580.0033
GLN 2590.0032
LEU 2600.0041
SER 2610.0035
THR 2620.0043
THR 2630.0051
SER 2640.0059
ASN 2650.0068
THR 2660.0074
THR 2670.0064
PHE 2680.0068
LEU 2690.0078
GLY 2700.0077
LEU 2710.0075
LYS 2720.0088
TRP 2730.0087
THR 2740.0080
ASN 2750.0083
LEU 2760.0074
THR 2770.0075
MET 2780.0066
LEU 2790.0059
ASP 2800.0051
LEU 2810.0047
SER 2820.0040
TYR 2830.0030
ASN 2840.0031
ASN 2850.0026
LEU 2860.0033
ASN 2870.0030
VAL 2880.0038
VAL 2890.0046
GLY 2900.0053
ASN 2910.0058
ASP 2920.0065
SER 2930.0062
PHE 2940.0066
ALA 2950.0073
TRP 2960.0079
LEU 2970.0077
PRO 2980.0086
GLN 2990.0084
LEU 3000.0074
GLU 3010.0073
TYR 3020.0066
PHE 3030.0059
PHE 3040.0051
LEU 3050.0044
GLU 3060.0042
TYR 3070.0032
ASN 3080.0029
ASN 3090.0023
ILE 3100.0031
GLN 3110.0024
HIS 3120.0029
LEU 3130.0036
PHE 3140.0041
SER 3150.0047
HIS 3160.0056
SER 3170.0051
LEU 3180.0055
HIS 3190.0063
GLY 3200.0069
LEU 3210.0066
PHE 3220.0072
ASN 3230.0074
VAL 3240.0067
ARG 3250.0068
TYR 3260.0061
LEU 3270.0053
ASN 3280.0047
LEU 3290.0040
LYS 3300.0038
ARG 3310.0033
SER 3320.0032
PHE 3330.0027
THR 3340.0019
LYS 3350.0017
GLN 3360.0015
SER 3370.0009
ILE 3380.0015
SER 3390.0014
LEU 3400.0007
ALA 3410.0004
SER 3420.0006
LEU 3430.0014
PRO 3440.0021
LYS 3450.0026
ILE 3460.0030
ASP 3470.0032
ASP 3480.0034
PHE 3490.0041
SER 3500.0042
PHE 3510.0046
GLN 3520.0052
TRP 3530.0055
LEU 3540.0055
LYS 3550.0062
CYS 3560.0061
LEU 3570.0054
GLU 3580.0057
HIS 3590.0051
LEU 3600.0043
ASN 3610.0042
MET 3620.0037
GLU 3630.0036
ASP 3640.0032
ASN 3650.0027
ASP 3660.0027
ILE 3670.0028
PRO 3680.0027
GLY 3690.0029
ILE 3700.0031
LYS 3710.0029
SER 3720.0033
ASN 3730.0034
MET 3740.0033
PHE 3750.0038
THR 3760.0040
GLY 3770.0043
LEU 3780.0044
ILE 3790.0047
ASN 3800.0048
LEU 3810.0039
LYS 3820.0042
TYR 3830.0039
LEU 3840.0034
SER 3850.0032
LEU 3860.0030
SER 3870.0030
ASN 3880.0029
SER 3890.0028
PHE 3900.0029
THR 3910.0030
SER 3920.0033
LEU 3930.0033
ARG 3940.0036
THR 3950.0038
LEU 3960.0033
THR 3970.0035
ASN 3980.0036
GLU 3990.0034
THR 4000.0032
PHE 4010.0030
VAL 4020.0031
SER 4030.0029
LEU 4040.0030
ALA 4050.0033
HIS 4060.0033
SER 4070.0029
PRO 4080.0029
LEU 4090.0027
HIS 4100.0026
ILE 4110.0025
LEU 4120.0025
ASN 4130.0025
LEU 4140.0025
THR 4150.0025
LYS 4160.0029
ASN 4170.0031
LYS 4180.0033
ILE 4190.0034
SER 4200.0036
LYS 4210.0035
ILE 4220.0031
GLU 4230.0034
SER 4240.0032
ASP 4250.0030
ALA 4260.0029
PHE 4270.0026
SER 4280.0028
TRP 4290.0026
LEU 4300.0022
GLY 4310.0018
HIS 4320.0014
LEU 4330.0014
GLU 4340.0014
VAL 4350.0015
LEU 4360.0017
ASP 4370.0018
LEU 4380.0022
GLY 4390.0023
LEU 4400.0025
ASN 4410.0030
GLU 4420.0035
ILE 4430.0033
GLY 4440.0037
GLN 4450.0035
GLU 4460.0032
LEU 4470.0026
THR 4480.0026
GLY 4490.0021
GLN 4500.0023
GLU 4510.0023
TRP 4520.0020
ARG 4530.0020
GLY 4540.0018
LEU 4550.0015
GLU 4560.0016
ASN 4570.0018
ILE 4580.0020
PHE 4590.0026
GLU 4600.0027
ILE 4610.0021
TYR 4620.0025
LEU 4630.0028
SER 4640.0032
TYR 4650.0035
ASN 4660.0033
LYS 4670.0041
TYR 4680.0040
LEU 4690.0033
GLN 4700.0034
LEU 4710.0029
THR 4720.0027
ARG 4730.0026
ASN 4740.0024
SER 4750.0024
PHE 4760.0024
ALA 4770.0024
LEU 4780.0022
VAL 4790.0027
PRO 4800.0033
SER 4810.0035
LEU 4820.0033
GLN 4830.0037
ARG 4840.0035
LEU 4850.0034
MET 4860.0038
LEU 4870.0039
ARG 4880.0045
ARG 4890.0047
VAL 4900.0042
ALA 4910.0047
LEU 4920.0041
LYS 4930.0043
ASN 4940.0041
VAL 4950.0045
ASP 4960.0045
SER 4970.0041
SER 4980.0043
PRO 4990.0043
SER 5000.0043
PRO 5010.0037
PHE 5020.0041
GLN 5030.0046
PRO 5040.0046
LEU 5050.0045
ARG 5060.0067
ASN 5070.0066
LEU 5080.0051
THR 5090.0055
ILE 5100.0046
LEU 5110.0050
ASP 5120.0054
LEU 5130.0054
SER 5140.0059
ASN 5150.0062
ASN 5160.0061
ASN 5170.0060
ILE 5180.0057
ALA 5190.0056
ASN 5200.0055
ILE 5210.0058
ASN 5220.0058
ASP 5230.0058
ASP 5240.0058
MET 5250.0057
LEU 5260.0066
GLU 5270.0073
GLY 5280.0076
LEU 5290.0071
GLU 5300.0082
LYS 5310.0067
LEU 5320.0063
GLU 5330.0062
ILE 5340.0062
LEU 5350.0062
ASP 5360.0070
LEU 5370.0069
GLN 5380.0074
HIS 5390.0077
ASN 5400.0074
ASN 5410.0072
LEU 5420.0066
ALA 5430.0063
ARG 5440.0063
LEU 5450.0060
TRP 5460.0056
LYS 5470.0057
HIS 5480.0053
ALA 5490.0060
ASN 5500.0063
PRO 5510.0067
GLY 5520.0063
GLY 5530.0054
PRO 5540.0052
ILE 5550.0055
TYR 5560.0054
PHE 5570.0056
LEU 5580.0055
LYS 5590.0052
GLY 5600.0051
LEU 5610.0056
SER 5620.0057
HIS 5630.0056
LEU 5640.0057
HIS 5650.0063
ILE 5660.0075
LEU 5670.0071
ASN 5680.0078
LEU 5690.0075
GLU 5700.0083
SER 5710.0084
ASN 5720.0080
GLY 5730.0077
PHE 5740.0066
ASP 5750.0061
GLU 5760.0054
ILE 5770.0049
PRO 5780.0044
VAL 5790.0036
GLU 5800.0036
VAL 5810.0041
PHE 5820.0041
LYS 5830.0038
ASP 5840.0039
LEU 5850.0043
PHE 5860.0040
GLU 5870.0049
LEU 5880.0051
LYS 5890.0070
ILE 5900.0078
ILE 5910.0074
ASP 5920.0084
LEU 5930.0077
GLY 5940.0088
LEU 5950.0099
ASN 5960.0095
ASN 5970.0090
LEU 5980.0069
ASN 5990.0059
THR 6000.0050
LEU 6010.0037
PRO 6020.0037
ALA 6030.0031
SER 6040.0025
VAL 6050.0023
PHE 6060.0030
ASN 6070.0037
ASN 6080.0036
GLN 6090.0043
VAL 6100.0057
SER 6110.0072
LEU 6120.0070
LYS 6130.0094
SER 6140.0093
LEU 6150.0077
ASN 6160.0091
LEU 6170.0078
GLN 6180.0098
LYS 6190.0110
ASN 6200.0097
LEU 6210.0098
ILE 6220.0068
THR 6230.0068
SER 6240.0053
VAL 6250.0030
GLU 6260.0043
LYS 6270.0050
LYS 6280.0051
VAL 6290.0026
PHE 6300.0029
GLY 6310.0056
PRO 6320.0057
ALA 6330.0050
PHE 6340.0068
ARG 6350.0089
ASN 6360.0106
LEU 6370.0101
THR 6380.0128
GLU 6390.0119
LEU 6400.0094
ASP 6410.0099
MET 6420.0073
ARG 6430.0096
PHE 6440.0108
ASN 6450.0088
PRO 6460.0107
PHE 6470.0072
ASP 6480.0094
CYS 6490.0089
THR 6500.0123
CYS 6510.0136
GLU 6520.0138
SER 6530.0097
ILE 6540.0066
ALA 6550.0098
TRP 6560.0081
PHE 6570.0050
VAL 6580.0065
ASN 6590.0097
TRP 6600.0087
ILE 6610.0083
ASN 6620.0108
GLU 6630.0122
THR 6640.0116
HIS 6650.0137
THR 6660.0134
ASN 6670.0144
ILE 6680.0117
PRO 6690.0137
GLU 6700.0127
LEU 6710.0095
SER 6720.0085
SER 6730.0106
HIS 6740.0104
TYR 6750.0065
LEU 6760.0072
CYS 6770.0080
ASN 6780.0128
THR 6790.0149
PRO 6800.0164
PRO 6810.0190
HIS 6820.0169
TYR 6830.0121
HIS 6840.0137
GLY 6850.0112
PHE 6860.0062
PRO 6870.0032
VAL 6880.0021
ARG 6890.0043
LEU 6900.0047
PHE 6910.0072
ASP 6920.0124
THR 6930.0150
SER 6940.0201
SER 6950.0211
CYS 6960.0204
GLU 10.0040
ALA 20.0040
ALA 30.0031
ALA 40.0020
LYS 50.0022
MET 60.0020
GLN 70.0011
ARG 80.0006
LEU 90.0007
VAL 100.0012
LEU 110.0010
LEU 120.0010
LEU 130.0012
ALA 140.0021
ILE 150.0024
SER 160.0024
LEU 170.0032
LEU 180.0038
LEU 190.0042
TYR 200.0045
GLN 210.0057
ASP 220.0062
LEU 230.0067
PRO 240.0079
VAL 250.0074
ARG 260.0061
SER 270.0064
GLU 280.0044
PHE 290.0053
GLU 300.0058
LEU 310.0045
ASP 320.0030
ARG 330.0027
ILE 340.0032
CYS 350.0035
GLY 360.0047
TYR 370.0057
GLY 380.0044
THR 390.0041
ALA 400.0029
ARG 410.0018
CYS 420.0014
ARG 430.0018
LYS 440.0025
LYS 450.0033
CYS 460.0039
ARG 470.0035
SER 480.0040
GLN 490.0033
GLU 500.0034
TYR 510.0044
ARG 520.0039
ILE 530.0040
GLY 540.0033
ARG 550.0024
CYS 560.0019
PRO 570.0016
ASN 580.0011
THR 590.0015
TYR 600.0018
ALA 610.0028
CYS 620.0026
CYS 630.0027
LEU 640.0031
ARG 650.0031
LYS 660.0053
TRP 670.0054
ASP 680.0036
GLU 690.0059
SER 700.0073
LEU 710.0094
LEU 720.0118
ASN 730.0129
ARG 740.0131
THR 750.0161
LYS 760.0177
PRO 770.0175
GLU 780.0181
ALA 790.0167
ALA 800.0167
ALA 810.0153
LYS 820.0122
LYS 830.0137
GLU 840.0133
MET 850.0129
ASN 860.0158
LEU 870.0130
SER 880.0137
VAL 890.0117
GLY 900.0121
LEU 910.0125
GLY 920.0129
GLY 930.0189
GLY 940.0228
SER 950.0217
ASN 960.0186
LEU 970.0167
SER 980.0170
VAL 990.0146
GLY 1000.0155
LEU 1010.0115
GLY 1020.0127
GLU 1030.0193
ILE 1040.0316
GLY 1050.0441
GLY 1060.0614
GLY 1070.0439
SER 1080.0324
LYS 1090.0153
LEU 1100.0126
LEU 1110.0179
ASP 1120.0186
ILE 1130.0179
ASN 1140.0215
LEU 1150.0201
GLY 1160.0321
ARG 1170.0369
GLY 1180.0310
GLY 1190.0254
GLY 1200.0162
SER 1210.0079
MET 1220.0044
VAL 1230.0044
ASP 1240.0044
LEU 1250.0069
THR 1260.0074
PHE 1270.0078
GLY 1280.0079
GLY 1290.0081
VAL 1300.0086
GLY 1310.0067
GLY 1320.0078
GLY 1330.0077
SER 1340.0091
THR 1350.0095
PHE 1360.0125
THR 1370.0121
PHE 1380.0105
PHE 1390.0102
PRO 1400.0089
LEU 1410.0076
VAL 1420.0087
ILE 1430.0093
GLY 1440.0140
GLY 1450.0170
GLY 1460.0178
SER 1470.0139
ASP 1480.0149
ALA 1490.0091
MET 1500.0060
TYR 1510.0040
LEU 1520.0060
GLY 1530.0088
PHE 1540.0112
ALA 1550.0141
ALA 1560.0113
GLY 1570.0100
GLY 1580.0084
GLY 1590.0073
SER 1600.0062
ALA 1610.0089
GLY 1620.0079
GLY 1630.0072
GLU 1640.0071
ASN 1650.0078
HIS 1660.0060
VAL 1670.0045
ALA 1680.0024
PHE 1690.0016
GLY 1700.0036
PRO 1710.0193
GLY 1720.0157
PRO 1730.0097
GLY 1740.0052
VAL 1750.0039
ASP 1760.0069
LEU 1770.0086
THR 1780.0080
PHE 1790.0105
GLY 1800.0101
GLY 1810.0108
VAL 1820.0159
GLN 1830.0153
PHE 1840.0180
ALA 1850.0193
MET 1860.0203
VAL 1870.0265
ASN 1880.0241
ASN 1890.0420
GLY 1900.0437
PRO 1910.0473
GLY 1920.0064
PRO 1930.0410
GLY 1940.0531
GLU 1950.0169
SER 1960.0223
PHE 1970.0305
THR 1980.0056
ALA 1990.0194
GLN 2000.0061
PRO 2010.0183
ALA 2020.0195
ASP 2030.0215
MET 2040.0186
GLN 2050.0242
ALA 2060.0439
GLY 2070.0506
ILE 2080.0418
LYS 2090.0596
GLY 2100.0464
PRO 2110.0391
GLY 2120.0266
PRO 2130.0220
GLY 2140.0350
GLY 2150.0429
SER 2160.0587
ILE 2170.0523
GLN 2180.0545
VAL 2190.0481
ILE 2200.0511
ASN 2210.0339
GLY 2220.0375
SER 2230.0330
THR 2240.0275
ILE 2250.0347
GLY 2260.0342
THR 2270.0259
GLY 2280.0228
SER 2290.0152
LYS 2300.0169
LYS 2310.0207
THR 2320.0220
ILE 2330.0177
LEU 2340.0182
ILE 2350.0156
TYR 2360.0032
SER 2370.0121
ILE 2380.0152
ILE 2390.0125
GLY 2400.0198
VAL 2410.0243
LYS 2420.0172
LYS 2430.0260
GLY 2440.0315
THR 2450.0240
LEU 2460.0215
ALA 2470.0135
TRP 2480.0158
ALA 2490.0185
ARG 2500.0256
THR 2510.0287
GLY 2520.0290
PHE 2530.0249
SER 2540.0262
PRO 2550.0223
ALA 2560.0240
LYS 2570.0214
LYS 2580.0184
LEU 2590.0167
ASN 2600.0187
ALA 2610.0200
GLY 2620.0180
VAL 2630.0192
VAL 2640.0188
ARG 2650.0204
VAL 2660.0158
PHE 2670.0143
PHE 2680.0157
LEU 2690.0170
ASN 2700.0264
GLN 2710.0230
LYS 2720.0232
LYS 2730.0228
ALA 2740.0222
LYS 2750.0220
ASP 2760.0233
VAL 2770.0189
LEU 2780.0184
ARG 2790.0191
LYS 2800.0185
THR 2810.0142
SER 2820.0071
ARG 2830.0032
PRO 2840.0131
MET 2850.0195
VAL 2860.0152
ASP 2870.0156
LEU 2880.0130
THR 2890.0124
PHE 2900.0029
GLY 2910.0104
GLY 2920.0160

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.