CNRS Nantes University US2B US2B
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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0937
THR 260.0043
LYS 270.0036
CYS 280.0029
THR 290.0031
VAL 300.0028
SER 310.0027
HIS 320.0027
GLU 330.0020
VAL 340.0017
ALA 350.0017
ASP 360.0016
CYS 370.0017
SER 380.0016
HIS 390.0019
LEU 400.0022
LYS 410.0019
LEU 420.0014
THR 430.0023
GLN 440.0024
VAL 450.0022
PRO 460.0020
ASP 470.0026
ASP 480.0023
LEU 490.0020
PRO 500.0025
THR 510.0029
ASN 520.0026
ILE 530.0019
THR 540.0020
VAL 550.0019
LEU 560.0012
ASN 570.0010
LEU 580.0010
THR 590.0013
HIS 600.0014
ASN 610.0022
GLN 620.0026
LEU 630.0032
ARG 640.0043
ARG 650.0048
LEU 660.0046
PRO 670.0050
ALA 680.0054
ALA 690.0053
ASN 700.0043
PHE 710.0040
THR 720.0047
ARG 730.0040
TYR 740.0034
SER 750.0041
GLN 760.0034
LEU 770.0031
THR 780.0034
SER 790.0033
LEU 800.0032
ASP 810.0029
VAL 820.0032
GLY 830.0035
PHE 840.0036
ASN 850.0036
THR 860.0046
ILE 870.0051
SER 880.0061
LYS 890.0065
LEU 900.0062
GLU 910.0066
PRO 920.0071
GLU 930.0067
LEU 940.0057
CYS 950.0059
GLN 960.0064
LYS 970.0055
LEU 980.0048
PRO 990.0052
MET 1000.0044
LEU 1010.0048
LYS 1020.0052
VAL 1030.0050
LEU 1040.0050
ASN 1050.0048
LEU 1060.0054
GLN 1070.0054
HIS 1080.0053
ASN 1090.0053
GLU 1100.0058
LEU 1110.0061
SER 1120.0067
GLN 1130.0073
LEU 1140.0075
SER 1150.0079
ASP 1160.0081
LYS 1170.0077
THR 1180.0071
PHE 1190.0069
ALA 1200.0072
PHE 1210.0068
CYS 1220.0062
THR 1230.0066
ASN 1240.0059
LEU 1250.0059
THR 1260.0066
GLU 1270.0063
LEU 1280.0062
HIS 1290.0060
LEU 1300.0060
MET 1310.0062
SER 1320.0060
ASN 1330.0060
SER 1340.0062
ILE 1350.0065
GLN 1360.0065
LYS 1370.0072
ILE 1380.0074
LYS 1390.0080
ASN 1400.0085
ASN 1410.0080
PRO 1420.0074
PHE 1430.0073
VAL 1440.0077
LYS 1450.0072
GLN 1460.0069
LYS 1470.0075
ASN 1480.0071
LEU 1490.0070
ILE 1500.0073
THR 1510.0069
LEU 1520.0065
ASP 1530.0062
LEU 1540.0060
SER 1550.0059
HIS 1560.0059
ASN 1570.0059
GLY 1580.0060
LEU 1590.0060
SER 1600.0063
SER 1610.0070
THR 1620.0071
LYS 1630.0074
LEU 1640.0071
GLY 1650.0076
THR 1660.0087
GLN 1670.0085
VAL 1680.0084
GLN 1690.0078
LEU 1700.0074
GLU 1710.0083
ASN 1720.0080
LEU 1730.0074
GLN 1740.0078
GLU 1750.0070
LEU 1760.0062
LEU 1770.0058
LEU 1780.0054
SER 1790.0054
ASN 1800.0052
ASN 1810.0057
LYS 1820.0057
ILE 1830.0057
GLN 1840.0060
ALA 1850.0063
LEU 1860.0072
LYS 1870.0079
SER 1880.0084
GLU 1890.0083
GLU 1900.0074
LEU 1910.0077
ASP 1920.0083
ILE 1930.0078
PHE 1940.0078
ALA 1950.0086
ASN 1960.0088
SER 1970.0079
SER 1980.0083
LEU 1990.0074
LYS 2000.0077
LYS 2010.0066
LEU 2020.0057
GLU 2030.0050
LEU 2040.0044
SER 2050.0043
SER 2060.0047
ASN 2070.0047
GLN 2080.0049
ILE 2090.0054
LYS 2100.0061
GLU 2110.0070
PHE 2120.0072
SER 2130.0082
PRO 2140.0091
GLY 2150.0090
CYS 2160.0077
PHE 2170.0076
HIS 2180.0086
ALA 2190.0082
ILE 2200.0077
GLY 2210.0081
ARG 2220.0081
LEU 2230.0071
PHE 2240.0076
GLY 2250.0064
LEU 2260.0052
PHE 2270.0044
LEU 2280.0037
ASN 2290.0036
ASN 2300.0031
VAL 2310.0035
GLN 2320.0039
LEU 2330.0046
GLY 2340.0050
PRO 2350.0062
SER 2360.0073
LEU 2370.0064
THR 2380.0061
GLU 2390.0077
LYS 2400.0077
LEU 2410.0069
CYS 2420.0077
LEU 2430.0089
GLU 2440.0079
LEU 2450.0075
ALA 2460.0089
ASN 2470.0096
THR 2480.0082
SER 2490.0081
ILE 2500.0071
ARG 2510.0080
ASN 2520.0066
LEU 2530.0053
SER 2540.0042
LEU 2550.0032
SER 2560.0032
ASN 2570.0025
SER 2580.0025
GLN 2590.0028
LEU 2600.0041
SER 2610.0046
THR 2620.0062
THR 2630.0070
SER 2640.0086
ASN 2650.0098
THR 2660.0098
THR 2670.0077
PHE 2680.0080
LEU 2690.0098
GLY 2700.0089
LEU 2710.0087
LYS 2720.0106
TRP 2730.0101
THR 2740.0087
ASN 2750.0091
LEU 2760.0078
THR 2770.0086
MET 2780.0075
LEU 2790.0065
ASP 2800.0056
LEU 2810.0044
SER 2820.0048
TYR 2830.0040
ASN 2840.0030
ASN 2850.0042
LEU 2860.0059
ASN 2870.0068
VAL 2880.0079
VAL 2890.0084
GLY 2900.0092
ASN 2910.0103
ASP 2920.0105
SER 2930.0091
PHE 2940.0093
ALA 2950.0105
TRP 2960.0102
LEU 2970.0096
PRO 2980.0113
GLN 2990.0103
LEU 3000.0095
GLU 3010.0110
TYR 3020.0100
PHE 3030.0092
PHE 3040.0082
LEU 3050.0077
GLU 3060.0080
TYR 3070.0074
ASN 3080.0066
ASN 3090.0073
ILE 3100.0088
GLN 3110.0096
HIS 3120.0103
LEU 3130.0104
PHE 3140.0108
SER 3150.0116
HIS 3160.0115
SER 3170.0101
LEU 3180.0104
HIS 3190.0111
GLY 3200.0109
LEU 3210.0111
PHE 3220.0123
ASN 3230.0120
VAL 3240.0114
ARG 3250.0121
TYR 3260.0118
LEU 3270.0112
ASN 3280.0106
LEU 3290.0104
LYS 3300.0104
ARG 3310.0104
SER 3320.0091
PHE 3330.0103
THR 3340.0099
LYS 3350.0108
GLN 3360.0129
SER 3370.0136
ILE 3380.0171
SER 3390.0186
LEU 3400.0176
ALA 3410.0150
SER 3420.0130
LEU 3430.0125
PRO 3440.0106
LYS 3450.0108
ILE 3460.0106
ASP 3470.0107
ASP 3480.0109
PHE 3490.0112
SER 3500.0110
PHE 3510.0116
GLN 3520.0124
TRP 3530.0116
LEU 3540.0116
LYS 3550.0126
CYS 3560.0130
LEU 3570.0124
GLU 3580.0128
HIS 3590.0121
LEU 3600.0115
ASN 3610.0115
MET 3620.0113
GLU 3630.0112
ASP 3640.0109
ASN 3650.0107
ASP 3660.0101
ILE 3670.0098
PRO 3680.0094
GLY 3690.0091
ILE 3700.0092
LYS 3710.0100
SER 3720.0103
ASN 3730.0106
MET 3740.0104
PHE 3750.0107
THR 3760.0118
GLY 3770.0122
LEU 3780.0121
ILE 3790.0128
ASN 3800.0127
LEU 3810.0120
LYS 3820.0119
TYR 3830.0112
LEU 3840.0105
SER 3850.0099
LEU 3860.0093
SER 3870.0088
ASN 3880.0083
SER 3890.0087
PHE 3900.0082
THR 3910.0076
SER 3920.0052
LEU 3930.0052
ARG 3940.0033
THR 3950.0045
LEU 3960.0050
THR 3970.0063
ASN 3980.0072
GLU 3990.0088
THR 4000.0080
PHE 4010.0084
VAL 4020.0097
SER 4030.0102
LEU 4040.0101
ALA 4050.0108
HIS 4060.0115
SER 4070.0109
PRO 4080.0113
LEU 4090.0102
HIS 4100.0101
ILE 4110.0086
LEU 4120.0076
ASN 4130.0067
LEU 4140.0056
THR 4150.0047
LYS 4160.0044
ASN 4170.0041
LYS 4180.0022
ILE 4190.0030
SER 4200.0030
LYS 4210.0039
ILE 4220.0042
GLU 4230.0056
SER 4240.0062
ASP 4250.0067
ALA 4260.0065
PHE 4270.0066
SER 4280.0077
TRP 4290.0086
LEU 4300.0080
GLY 4310.0086
HIS 4320.0087
LEU 4330.0073
GLU 4340.0068
VAL 4350.0056
LEU 4360.0043
ASP 4370.0035
LEU 4380.0029
GLY 4390.0019
LEU 4400.0012
ASN 4410.0011
GLU 4420.0017
ILE 4430.0024
GLY 4440.0034
GLN 4450.0042
GLU 4460.0054
LEU 4470.0048
THR 4480.0054
GLY 4490.0051
GLN 4500.0061
GLU 4510.0058
TRP 4520.0054
ARG 4530.0065
GLY 4540.0072
LEU 4550.0063
GLU 4560.0068
ASN 4570.0065
ILE 4580.0056
PHE 4590.0053
GLU 4600.0044
ILE 4610.0036
TYR 4620.0034
LEU 4630.0032
SER 4640.0034
TYR 4650.0037
ASN 4660.0028
LYS 4670.0034
TYR 4680.0040
LEU 4690.0040
GLN 4700.0047
LEU 4710.0052
THR 4720.0054
ARG 4730.0051
ASN 4740.0054
SER 4750.0052
PHE 4760.0048
ALA 4770.0053
LEU 4780.0055
VAL 4790.0052
PRO 4800.0053
SER 4810.0056
LEU 4820.0051
GLN 4830.0053
ARG 4840.0049
LEU 4850.0046
MET 4860.0050
LEU 4870.0049
ARG 4880.0058
ARG 4890.0060
VAL 4900.0051
ALA 4910.0056
LEU 4920.0058
LYS 4930.0057
ASN 4940.0059
VAL 4950.0061
ASP 4960.0065
SER 4970.0061
SER 4980.0058
PRO 4990.0056
SER 5000.0059
PRO 5010.0059
PHE 5020.0056
GLN 5030.0055
PRO 5040.0057
LEU 5050.0055
ARG 5060.0064
ASN 5070.0064
LEU 5080.0062
THR 5090.0062
ILE 5100.0061
LEU 5110.0062
ASP 5120.0068
LEU 5130.0071
SER 5140.0077
ASN 5150.0083
ASN 5160.0091
ASN 5170.0096
ILE 5180.0092
ALA 5190.0096
ASN 5200.0092
ILE 5210.0088
ASN 5220.0082
ASP 5230.0079
ASP 5240.0072
MET 5250.0075
LEU 5260.0075
GLU 5270.0071
GLY 5280.0067
LEU 5290.0069
GLU 5300.0067
LYS 5310.0067
LEU 5320.0071
GLU 5330.0075
ILE 5340.0079
LEU 5350.0082
ASP 5360.0087
LEU 5370.0093
GLN 5380.0100
HIS 5390.0108
ASN 5400.0107
ASN 5410.0125
LEU 5420.0120
ALA 5430.0123
ARG 5440.0127
LEU 5450.0121
TRP 5460.0126
LYS 5470.0133
HIS 5480.0135
ALA 5490.0145
ASN 5500.0145
PRO 5510.0159
GLY 5520.0149
GLY 5530.0135
PRO 5540.0121
ILE 5550.0113
TYR 5560.0105
PHE 5570.0103
LEU 5580.0094
LYS 5590.0090
GLY 5600.0083
LEU 5610.0082
SER 5620.0077
HIS 5630.0077
LEU 5640.0083
HIS 5650.0084
ILE 5660.0091
LEU 5670.0096
ASN 5680.0101
LEU 5690.0107
GLU 5700.0110
SER 5710.0119
ASN 5720.0123
GLY 5730.0125
PHE 5740.0120
ASP 5750.0121
GLU 5760.0125
ILE 5770.0119
PRO 5780.0121
VAL 5790.0114
GLU 5800.0113
VAL 5810.0110
PHE 5820.0101
LYS 5830.0096
ASP 5840.0089
LEU 5850.0088
PHE 5860.0083
GLU 5870.0081
LEU 5880.0087
LYS 5890.0083
ILE 5900.0090
ILE 5910.0101
ASP 5920.0105
LEU 5930.0108
GLY 5940.0107
LEU 5950.0113
ASN 5960.0117
ASN 5970.0115
LEU 5980.0110
ASN 5990.0101
THR 6000.0110
LEU 6010.0108
PRO 6020.0117
ALA 6030.0112
SER 6040.0110
VAL 6050.0113
PHE 6060.0102
ASN 6070.0098
ASN 6080.0096
GLN 6090.0091
VAL 6100.0081
SER 6110.0089
LEU 6120.0091
LYS 6130.0090
SER 6140.0093
LEU 6150.0095
ASN 6160.0102
LEU 6170.0097
GLN 6180.0089
LYS 6190.0088
ASN 6200.0092
LEU 6210.0085
ILE 6220.0081
THR 6230.0068
SER 6240.0086
VAL 6250.0089
GLU 6260.0091
LYS 6270.0101
LYS 6280.0120
VAL 6290.0113
PHE 6300.0098
GLY 6310.0096
PRO 6320.0100
ALA 6330.0097
PHE 6340.0091
ARG 6350.0092
ASN 6360.0097
LEU 6370.0091
THR 6380.0090
GLU 6390.0085
LEU 6400.0080
ASP 6410.0081
MET 6420.0070
ARG 6430.0060
PHE 6440.0056
ASN 6450.0051
PRO 6460.0032
PHE 6470.0036
ASP 6480.0061
CYS 6490.0081
THR 6500.0116
CYS 6510.0136
GLU 6520.0142
SER 6530.0105
ILE 6540.0087
ALA 6550.0115
TRP 6560.0095
PHE 6570.0072
VAL 6580.0066
ASN 6590.0086
TRP 6600.0079
ILE 6610.0056
ASN 6620.0081
GLU 6630.0109
THR 6640.0104
HIS 6650.0115
THR 6660.0081
ASN 6670.0067
ILE 6680.0054
PRO 6690.0062
GLU 6700.0058
LEU 6710.0027
SER 6720.0043
SER 6730.0062
HIS 6740.0049
TYR 6750.0019
LEU 6760.0038
CYS 6770.0043
ASN 6780.0037
THR 6790.0050
PRO 6800.0091
PRO 6810.0113
HIS 6820.0143
TYR 6830.0110
HIS 6840.0094
GLY 6850.0096
PHE 6860.0093
PRO 6870.0063
VAL 6880.0050
ARG 6890.0055
LEU 6900.0092
PHE 6910.0104
ASP 6920.0152
THR 6930.0163
SER 6940.0215
SER 6950.0229
CYS 6960.0221
GLU 10.0219
ALA 20.0179
ALA 30.0164
ALA 40.0159
LYS 50.0116
MET 60.0092
GLN 70.0097
ARG 80.0080
LEU 90.0052
VAL 100.0058
LEU 110.0075
LEU 120.0048
LEU 130.0050
ALA 140.0085
ILE 150.0091
SER 160.0087
LEU 170.0154
LEU 180.0190
LEU 190.0172
TYR 200.0227
GLN 210.0296
ASP 220.0309
LEU 230.0334
PRO 240.0424
VAL 250.0426
ARG 260.0343
SER 270.0279
GLU 280.0230
PHE 290.0185
GLU 300.0181
LEU 310.0114
ASP 320.0081
ARG 330.0059
ILE 340.0069
CYS 350.0052
GLY 360.0075
TYR 370.0100
GLY 380.0085
THR 390.0089
ALA 400.0060
ARG 410.0045
CYS 420.0034
ARG 430.0031
LYS 440.0032
LYS 450.0041
CYS 460.0052
ARG 470.0062
SER 480.0067
GLN 490.0069
GLU 500.0059
TYR 510.0046
ARG 520.0036
ILE 530.0036
GLY 540.0028
ARG 550.0024
CYS 560.0034
PRO 570.0047
ASN 580.0038
THR 590.0033
TYR 600.0025
ALA 610.0032
CYS 620.0037
CYS 630.0048
LEU 640.0059
ARG 650.0071
LYS 660.0088
TRP 670.0119
ASP 680.0056
GLU 690.0093
SER 700.0108
LEU 710.0044
LEU 720.0130
ASN 730.0203
ARG 740.0158
THR 750.0077
LYS 760.0338
PRO 770.0426
GLU 780.0883
ALA 790.0937
ALA 800.0594
ALA 810.0264
LYS 820.0233
LYS 830.0190
GLU 840.0177
MET 850.0141
ASN 860.0143
LEU 870.0113
SER 880.0119
VAL 890.0098
GLY 900.0130
LEU 910.0158
GLY 920.0229
GLY 930.0327
GLY 940.0335
SER 950.0266
ASN 960.0174
LEU 970.0116
SER 980.0116
VAL 990.0087
GLY 1000.0133
LEU 1010.0158
GLY 1020.0197
GLU 1030.0207
ILE 1040.0233
GLY 1050.0245
GLY 1060.0234
GLY 1070.0203
SER 1080.0171
LYS 1090.0141
LEU 1100.0112
LEU 1110.0077
ASP 1120.0021
ILE 1130.0047
ASN 1140.0092
LEU 1150.0114
GLY 1160.0222
ARG 1170.0273
GLY 1180.0252
GLY 1190.0185
GLY 1200.0086
SER 1210.0055
MET 1220.0040
VAL 1230.0044
ASP 1240.0065
LEU 1250.0064
THR 1260.0061
PHE 1270.0057
GLY 1280.0050
GLY 1290.0047
VAL 1300.0047
GLY 1310.0038
GLY 1320.0047
GLY 1330.0044
SER 1340.0053
THR 1350.0053
PHE 1360.0072
THR 1370.0067
PHE 1380.0054
PHE 1390.0057
PRO 1400.0053
LEU 1410.0069
VAL 1420.0099
ILE 1430.0103
GLY 1440.0149
GLY 1450.0167
GLY 1460.0178
SER 1470.0148
ASP 1480.0130
ALA 1490.0091
MET 1500.0057
TYR 1510.0008
LEU 1520.0014
GLY 1530.0023
PHE 1540.0042
ALA 1550.0053
ALA 1560.0083
GLY 1570.0077
GLY 1580.0063
GLY 1590.0054
SER 1600.0041
ALA 1610.0050
GLY 1620.0042
GLY 1630.0041
GLU 1640.0047
ASN 1650.0054
HIS 1660.0061
VAL 1670.0050
ALA 1680.0046
PHE 1690.0035
GLY 1700.0035
PRO 1710.0110
GLY 1720.0106
PRO 1730.0094
GLY 1740.0070
VAL 1750.0056
ASP 1760.0050
LEU 1770.0057
THR 1780.0057
PHE 1790.0064
GLY 1800.0064
GLY 1810.0048
VAL 1820.0052
GLN 1830.0043
PHE 1840.0056
ALA 1850.0051
MET 1860.0081
VAL 1870.0122
ASN 1880.0152
ASN 1890.0249
GLY 1900.0280
PRO 1910.0333
GLY 1920.0192
PRO 1930.0064
GLY 1940.0195
GLU 1950.0121
SER 1960.0179
PHE 1970.0093
THR 1980.0147
ALA 1990.0114
GLN 2000.0106
PRO 2010.0055
ALA 2020.0128
ASP 2030.0223
MET 2040.0235
GLN 2050.0276
ALA 2060.0271
GLY 2070.0286
ILE 2080.0140
LYS 2090.0352
GLY 2100.0344
PRO 2110.0098
GLY 2120.0131
PRO 2130.0073
GLY 2140.0145
GLY 2150.0160
SER 2160.0201
ILE 2170.0178
GLN 2180.0135
VAL 2190.0143
ILE 2200.0113
ASN 2210.0123
GLY 2220.0119
SER 2230.0100
THR 2240.0085
ILE 2250.0085
GLY 2260.0065
THR 2270.0026
GLY 2280.0053
SER 2290.0074
LYS 2300.0058
LYS 2310.0019
THR 2320.0018
ILE 2330.0017
LEU 2340.0024
ILE 2350.0027
TYR 2360.0060
SER 2370.0078
ILE 2380.0114
ILE 2390.0118
GLY 2400.0167
VAL 2410.0212
LYS 2420.0242
LYS 2430.0253
GLY 2440.0218
THR 2450.0204
LEU 2460.0162
ALA 2470.0148
TRP 2480.0112
ALA 2490.0100
ARG 2500.0070
THR 2510.0035
GLY 2520.0023
PHE 2530.0020
SER 2540.0028
PRO 2550.0025
ALA 2560.0056
LYS 2570.0079
LYS 2580.0096
LEU 2590.0085
ASN 2600.0147
ALA 2610.0155
GLY 2620.0112
VAL 2630.0085
VAL 2640.0054
ARG 2650.0064
VAL 2660.0097
PHE 2670.0086
PHE 2680.0089
LEU 2690.0065
ASN 2700.0080
GLN 2710.0076
LYS 2720.0060
LYS 2730.0051
ALA 2740.0072
LYS 2750.0100
ASP 2760.0088
VAL 2770.0029
LEU 2780.0079
ARG 2790.0082
LYS 2800.0045
THR 2810.0058
SER 2820.0072
ARG 2830.0060
PRO 2840.0069
MET 2850.0060
VAL 2860.0083
ASP 2870.0088
LEU 2880.0047
THR 2890.0076
PHE 2900.0047
GLY 2910.0042
GLY 2920.0131

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.