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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0543
THR 260.0070
LYS 270.0077
CYS 280.0078
THR 290.0075
VAL 300.0089
SER 310.0080
HIS 320.0103
GLU 330.0122
VAL 340.0102
ALA 350.0093
ASP 360.0079
CYS 370.0073
SER 380.0065
HIS 390.0060
LEU 400.0064
LYS 410.0051
LEU 420.0061
THR 430.0068
GLN 440.0077
VAL 450.0070
PRO 460.0098
ASP 470.0116
ASP 480.0137
LEU 490.0126
PRO 500.0143
THR 510.0136
ASN 520.0143
ILE 530.0118
THR 540.0110
VAL 550.0089
LEU 560.0067
ASN 570.0062
LEU 580.0047
THR 590.0041
HIS 600.0032
ASN 610.0023
GLN 620.0038
LEU 630.0035
ARG 640.0057
ARG 650.0048
LEU 660.0037
PRO 670.0053
ALA 680.0038
ALA 690.0067
ASN 700.0070
PHE 710.0056
THR 720.0072
ARG 730.0097
TYR 740.0082
SER 750.0080
GLN 760.0091
LEU 770.0068
THR 780.0080
SER 790.0065
LEU 800.0034
ASP 810.0042
VAL 820.0026
GLY 830.0042
PHE 840.0040
ASN 850.0034
THR 860.0054
ILE 870.0054
SER 880.0075
LYS 890.0070
LEU 900.0056
GLU 910.0050
PRO 920.0052
GLU 930.0034
LEU 940.0024
CYS 950.0039
GLN 960.0023
LYS 970.0018
LEU 980.0031
PRO 990.0048
MET 1000.0064
LEU 1010.0053
LYS 1020.0072
VAL 1030.0075
LEU 1040.0069
ASN 1050.0074
LEU 1060.0073
GLN 1070.0085
HIS 1080.0088
ASN 1090.0082
GLU 1100.0088
LEU 1110.0090
SER 1120.0089
GLN 1130.0084
LEU 1140.0081
SER 1150.0077
ASP 1160.0077
LYS 1170.0076
THR 1180.0078
PHE 1190.0077
ALA 1200.0075
PHE 1210.0070
CYS 1220.0073
THR 1230.0077
ASN 1240.0075
LEU 1250.0079
THR 1260.0081
GLU 1270.0087
LEU 1280.0087
HIS 1290.0093
LEU 1300.0093
MET 1310.0098
SER 1320.0103
ASN 1330.0098
SER 1340.0099
ILE 1350.0090
GLN 1360.0074
LYS 1370.0065
ILE 1380.0061
LYS 1390.0058
ASN 1400.0052
ASN 1410.0058
PRO 1420.0070
PHE 1430.0069
VAL 1440.0059
LYS 1450.0068
GLN 1460.0070
LYS 1470.0063
ASN 1480.0077
LEU 1490.0080
ILE 1500.0086
THR 1510.0090
LEU 1520.0084
ASP 1530.0091
LEU 1540.0085
SER 1550.0091
HIS 1560.0100
ASN 1570.0093
GLY 1580.0085
LEU 1590.0063
SER 1600.0052
SER 1610.0032
THR 1620.0020
LYS 1630.0019
LEU 1640.0038
GLY 1650.0027
THR 1660.0016
GLN 1670.0007
VAL 1680.0027
GLN 1690.0040
LEU 1700.0060
GLU 1710.0061
ASN 1720.0084
LEU 1730.0077
GLN 1740.0092
GLU 1750.0088
LEU 1760.0068
LEU 1770.0073
LEU 1780.0057
SER 1790.0068
ASN 1800.0075
ASN 1810.0066
LYS 1820.0060
ILE 1830.0031
GLN 1840.0042
ALA 1850.0043
LEU 1860.0043
LYS 1870.0063
SER 1880.0075
GLU 1890.0062
GLU 1900.0030
LEU 1910.0035
ASP 1920.0053
ILE 1930.0037
PHE 1940.0063
ALA 1950.0084
ASN 1960.0092
SER 1970.0090
SER 1980.0112
LEU 1990.0097
LYS 2000.0119
LYS 2010.0099
LEU 2020.0070
GLU 2030.0063
LEU 2040.0036
SER 2050.0045
SER 2060.0044
ASN 2070.0028
GLN 2080.0032
ILE 2090.0029
LYS 2100.0058
GLU 2110.0072
PHE 2120.0075
SER 2130.0097
PRO 2140.0120
GLY 2150.0121
CYS 2160.0087
PHE 2170.0092
HIS 2180.0117
ALA 2190.0099
ILE 2200.0098
GLY 2210.0125
ARG 2220.0133
LEU 2230.0116
PHE 2240.0130
GLY 2250.0108
LEU 2260.0079
PHE 2270.0062
LEU 2280.0037
ASN 2290.0036
ASN 2300.0027
VAL 2310.0005
GLN 2320.0021
LEU 2330.0031
GLY 2340.0041
PRO 2350.0056
SER 2360.0077
LEU 2370.0067
THR 2380.0061
GLU 2390.0085
LYS 2400.0095
LEU 2410.0082
CYS 2420.0098
LEU 2430.0120
GLU 2440.0113
LEU 2450.0113
ALA 2460.0139
ASN 2470.0160
THR 2480.0146
SER 2490.0151
ILE 2500.0127
ARG 2510.0123
ASN 2520.0103
LEU 2530.0079
SER 2540.0060
LEU 2550.0037
SER 2560.0025
ASN 2570.0016
SER 2580.0012
GLN 2590.0015
LEU 2600.0020
SER 2610.0016
THR 2620.0019
THR 2630.0026
SER 2640.0036
ASN 2650.0047
THR 2660.0082
THR 2670.0067
PHE 2680.0075
LEU 2690.0095
GLY 2700.0108
LEU 2710.0105
LYS 2720.0123
TRP 2730.0138
THR 2740.0128
ASN 2750.0133
LEU 2760.0093
THR 2770.0090
MET 2780.0076
LEU 2790.0057
ASP 2800.0045
LEU 2810.0019
SER 2820.0020
TYR 2830.0018
ASN 2840.0014
ASN 2850.0014
LEU 2860.0022
ASN 2870.0020
VAL 2880.0014
VAL 2890.0014
GLY 2900.0009
ASN 2910.0006
ASP 2920.0018
SER 2930.0026
PHE 2940.0037
ALA 2950.0038
TRP 2960.0062
LEU 2970.0063
PRO 2980.0068
GLN 2990.0077
LEU 3000.0067
GLU 3010.0057
TYR 3020.0054
PHE 3030.0038
PHE 3040.0034
LEU 3050.0019
GLU 3060.0023
TYR 3070.0018
ASN 3080.0018
ASN 3090.0018
ILE 3100.0023
GLN 3110.0029
HIS 3120.0031
LEU 3130.0032
PHE 3140.0033
SER 3150.0036
HIS 3160.0023
SER 3170.0019
LEU 3180.0029
HIS 3190.0028
GLY 3200.0034
LEU 3210.0034
PHE 3220.0043
ASN 3230.0050
VAL 3240.0048
ARG 3250.0058
TYR 3260.0050
LEU 3270.0038
ASN 3280.0031
LEU 3290.0021
LYS 3300.0018
ARG 3310.0015
SER 3320.0018
PHE 3330.0018
THR 3340.0019
LYS 3350.0018
GLN 3360.0055
SER 3370.0086
ILE 3380.0119
SER 3390.0153
LEU 3400.0146
ALA 3410.0090
SER 3420.0074
LEU 3430.0047
PRO 3440.0032
LYS 3450.0040
ILE 3460.0034
ASP 3470.0044
ASP 3480.0053
PHE 3490.0056
SER 3500.0047
PHE 3510.0045
GLN 3520.0055
TRP 3530.0051
LEU 3540.0053
LYS 3550.0066
CYS 3560.0068
LEU 3570.0059
GLU 3580.0064
HIS 3590.0055
LEU 3600.0043
ASN 3610.0030
MET 3620.0021
GLU 3630.0019
ASP 3640.0016
ASN 3650.0007
ASP 3660.0015
ILE 3670.0013
PRO 3680.0030
GLY 3690.0025
ILE 3700.0027
LYS 3710.0046
SER 3720.0057
ASN 3730.0060
MET 3740.0048
PHE 3750.0051
THR 3760.0064
GLY 3770.0073
LEU 3780.0068
ILE 3790.0082
ASN 3800.0082
LEU 3810.0068
LYS 3820.0068
TYR 3830.0057
LEU 3840.0041
SER 3850.0034
LEU 3860.0024
SER 3870.0036
ASN 3880.0035
SER 3890.0018
PHE 3900.0017
THR 3910.0043
SER 3920.0053
LEU 3930.0043
ARG 3940.0061
THR 3950.0058
LEU 3960.0042
THR 3970.0050
ASN 3980.0050
GLU 3990.0054
THR 4000.0036
PHE 4010.0032
VAL 4020.0053
SER 4030.0055
LEU 4040.0051
ALA 4050.0062
HIS 4060.0078
SER 4070.0070
PRO 4080.0075
LEU 4090.0058
HIS 4100.0063
ILE 4110.0052
LEU 4120.0036
ASN 4130.0045
LEU 4140.0039
THR 4150.0061
LYS 4160.0071
ASN 4170.0057
LYS 4180.0073
ILE 4190.0064
SER 4200.0079
LYS 4210.0069
ILE 4220.0055
GLU 4230.0055
SER 4240.0050
ASP 4250.0037
ALA 4260.0034
PHE 4270.0020
SER 4280.0028
TRP 4290.0037
LEU 4300.0035
GLY 4310.0031
HIS 4320.0047
LEU 4330.0039
GLU 4340.0056
VAL 4350.0061
LEU 4360.0051
ASP 4370.0066
LEU 4380.0067
GLY 4390.0088
LEU 4400.0101
ASN 4410.0096
GLU 4420.0102
ILE 4430.0092
GLY 4440.0099
GLN 4450.0090
GLU 4460.0087
LEU 4470.0075
THR 4480.0068
GLY 4490.0058
GLN 4500.0050
GLU 4510.0049
TRP 4520.0042
ARG 4530.0030
GLY 4540.0022
LEU 4550.0033
GLU 4560.0028
ASN 4570.0042
ILE 4580.0048
PHE 4590.0065
GLU 4600.0070
ILE 4610.0072
TYR 4620.0084
LEU 4630.0089
SER 4640.0102
TYR 4650.0112
ASN 4660.0106
LYS 4670.0114
TYR 4680.0105
LEU 4690.0092
GLN 4700.0087
LEU 4710.0079
THR 4720.0078
ARG 4730.0070
ASN 4740.0076
SER 4750.0079
PHE 4760.0072
ALA 4770.0066
LEU 4780.0062
VAL 4790.0064
PRO 4800.0063
SER 4810.0067
LEU 4820.0072
GLN 4830.0075
ARG 4840.0079
LEU 4850.0080
MET 4860.0085
LEU 4870.0088
ARG 4880.0093
ARG 4890.0102
VAL 4900.0103
ALA 4910.0099
LEU 4920.0089
LYS 4930.0087
ASN 4940.0080
VAL 4950.0075
ASP 4960.0069
SER 4970.0078
SER 4980.0078
PRO 4990.0072
SER 5000.0067
PRO 5010.0078
PHE 5020.0069
GLN 5030.0064
PRO 5040.0072
LEU 5050.0070
ARG 5060.0080
ASN 5070.0083
LEU 5080.0073
THR 5090.0065
ILE 5100.0059
LEU 5110.0060
ASP 5120.0065
LEU 5130.0064
SER 5140.0062
ASN 5150.0069
ASN 5160.0073
ASN 5170.0058
ILE 5180.0061
ALA 5190.0068
ASN 5200.0073
ILE 5210.0055
ASN 5220.0059
ASP 5230.0047
ASP 5240.0045
MET 5250.0046
LEU 5260.0036
GLU 5270.0037
GLY 5280.0038
LEU 5290.0038
GLU 5300.0034
LYS 5310.0052
LEU 5320.0040
GLU 5330.0045
ILE 5340.0037
LEU 5350.0019
ASP 5360.0028
LEU 5370.0018
GLN 5380.0017
HIS 5390.0020
ASN 5400.0032
ASN 5410.0045
LEU 5420.0046
ALA 5430.0063
ARG 5440.0084
LEU 5450.0075
TRP 5460.0077
LYS 5470.0101
HIS 5480.0125
ALA 5490.0138
ASN 5500.0123
PRO 5510.0154
GLY 5520.0148
GLY 5530.0130
PRO 5540.0097
ILE 5550.0070
TYR 5560.0055
PHE 5570.0037
LEU 5580.0027
LYS 5590.0035
GLY 5600.0026
LEU 5610.0021
SER 5620.0033
HIS 5630.0034
LEU 5640.0030
HIS 5650.0042
ILE 5660.0041
LEU 5670.0034
ASN 5680.0033
LEU 5690.0034
GLU 5700.0039
SER 5710.0033
ASN 5720.0035
GLY 5730.0050
PHE 5740.0061
ASP 5750.0079
GLU 5760.0086
ILE 5770.0079
PRO 5780.0084
VAL 5790.0091
GLU 5800.0077
VAL 5810.0063
PHE 5820.0062
LYS 5830.0068
ASP 5840.0058
LEU 5850.0055
PHE 5860.0057
GLU 5870.0054
LEU 5880.0055
LYS 5890.0061
ILE 5900.0060
ILE 5910.0065
ASP 5920.0065
LEU 5930.0069
GLY 5940.0073
LEU 5950.0072
ASN 5960.0075
ASN 5970.0073
LEU 5980.0073
ASN 5990.0070
THR 6000.0072
LEU 6010.0075
PRO 6020.0075
ALA 6030.0075
SER 6040.0076
VAL 6050.0076
PHE 6060.0071
ASN 6070.0073
ASN 6080.0070
GLN 6090.0069
VAL 6100.0071
SER 6110.0064
LEU 6120.0065
LYS 6130.0067
SER 6140.0070
LEU 6150.0070
ASN 6160.0082
LEU 6170.0080
GLN 6180.0085
LYS 6190.0089
ASN 6200.0085
LEU 6210.0080
ILE 6220.0063
THR 6230.0046
SER 6240.0035
VAL 6250.0030
GLU 6260.0031
LYS 6270.0035
LYS 6280.0040
VAL 6290.0056
PHE 6300.0058
GLY 6310.0048
PRO 6320.0058
ALA 6330.0064
PHE 6340.0061
ARG 6350.0062
ASN 6360.0052
LEU 6370.0060
THR 6380.0074
GLU 6390.0078
LEU 6400.0069
ASP 6410.0086
MET 6420.0070
ARG 6430.0081
PHE 6440.0082
ASN 6450.0067
PRO 6460.0065
PHE 6470.0031
ASP 6480.0046
CYS 6490.0050
THR 6500.0083
CYS 6510.0098
GLU 6520.0089
SER 6530.0053
ILE 6540.0031
ALA 6550.0073
TRP 6560.0045
PHE 6570.0041
VAL 6580.0062
ASN 6590.0077
TRP 6600.0074
ILE 6610.0078
ASN 6620.0079
GLU 6630.0081
THR 6640.0082
HIS 6650.0083
THR 6660.0077
ASN 6670.0098
ILE 6680.0088
PRO 6690.0113
GLU 6700.0116
LEU 6710.0095
SER 6720.0094
SER 6730.0095
HIS 6740.0083
TYR 6750.0054
LEU 6760.0035
CYS 6770.0015
ASN 6780.0057
THR 6790.0086
PRO 6800.0103
PRO 6810.0116
HIS 6820.0114
TYR 6830.0071
HIS 6840.0052
GLY 6850.0013
PHE 6860.0033
PRO 6870.0049
VAL 6880.0043
ARG 6890.0079
LEU 6900.0091
PHE 6910.0089
ASP 6920.0140
THR 6930.0152
SER 6940.0207
SER 6950.0206
CYS 6960.0186
GLU 10.0264
ALA 20.0222
ALA 30.0195
ALA 40.0167
LYS 50.0134
MET 60.0098
GLN 70.0082
ARG 80.0059
LEU 90.0056
VAL 100.0046
LEU 110.0031
LEU 120.0026
LEU 130.0024
ALA 140.0023
ILE 150.0015
SER 160.0024
LEU 170.0027
LEU 180.0026
LEU 190.0044
TYR 200.0054
GLN 210.0081
ASP 220.0086
LEU 230.0129
PRO 240.0162
VAL 250.0166
ARG 260.0173
SER 270.0134
GLU 280.0136
PHE 290.0106
GLU 300.0089
LEU 310.0100
ASP 320.0100
ARG 330.0057
ILE 340.0077
CYS 350.0103
GLY 360.0216
TYR 370.0296
GLY 380.0213
THR 390.0216
ALA 400.0089
ARG 410.0037
CYS 420.0031
ARG 430.0027
LYS 440.0052
LYS 450.0049
CYS 460.0045
ARG 470.0066
SER 480.0084
GLN 490.0078
GLU 500.0041
TYR 510.0017
ARG 520.0033
ILE 530.0050
GLY 540.0064
ARG 550.0066
CYS 560.0053
PRO 570.0069
ASN 580.0068
THR 590.0068
TYR 600.0053
ALA 610.0057
CYS 620.0043
CYS 630.0019
LEU 640.0047
ARG 650.0070
LYS 660.0095
TRP 670.0097
ASP 680.0096
GLU 690.0087
SER 700.0094
LEU 710.0084
LEU 720.0087
ASN 730.0072
ARG 740.0065
THR 750.0073
LYS 760.0130
PRO 770.0188
GLU 780.0361
ALA 790.0391
ALA 800.0257
ALA 810.0099
LYS 820.0082
LYS 830.0089
GLU 840.0089
MET 850.0093
ASN 860.0097
LEU 870.0097
SER 880.0122
VAL 890.0152
GLY 900.0193
LEU 910.0274
GLY 920.0398
GLY 930.0495
GLY 940.0414
SER 950.0310
ASN 960.0183
LEU 970.0148
SER 980.0104
VAL 990.0093
GLY 1000.0100
LEU 1010.0099
GLY 1020.0077
GLU 1030.0052
ILE 1040.0025
GLY 1050.0042
GLY 1060.0068
GLY 1070.0057
SER 1080.0060
LYS 1090.0053
LEU 1100.0053
LEU 1110.0136
ASP 1120.0156
ILE 1130.0142
ASN 1140.0209
LEU 1150.0219
GLY 1160.0333
ARG 1170.0464
GLY 1180.0289
GLY 1190.0423
GLY 1200.0543
SER 1210.0290
MET 1220.0206
VAL 1230.0181
ASP 1240.0113
LEU 1250.0097
THR 1260.0070
PHE 1270.0078
GLY 1280.0070
GLY 1290.0071
VAL 1300.0081
GLY 1310.0068
GLY 1320.0072
GLY 1330.0072
SER 1340.0074
THR 1350.0075
PHE 1360.0082
THR 1370.0085
PHE 1380.0071
PHE 1390.0094
PRO 1400.0099
LEU 1410.0189
VAL 1420.0259
ILE 1430.0267
GLY 1440.0351
GLY 1450.0374
GLY 1460.0138
SER 1470.0088
ASP 1480.0165
ALA 1490.0079
MET 1500.0081
TYR 1510.0056
LEU 1520.0061
GLY 1530.0071
PHE 1540.0078
ALA 1550.0089
ALA 1560.0111
GLY 1570.0101
GLY 1580.0079
GLY 1590.0061
SER 1600.0036
ALA 1610.0050
GLY 1620.0044
GLY 1630.0046
GLU 1640.0051
ASN 1650.0060
HIS 1660.0069
VAL 1670.0106
ALA 1680.0104
PHE 1690.0139
GLY 1700.0134
PRO 1710.0246
GLY 1720.0354
PRO 1730.0465
GLY 1740.0363
VAL 1750.0211
ASP 1760.0174
LEU 1770.0127
THR 1780.0132
PHE 1790.0101
GLY 1800.0122
GLY 1810.0186
VAL 1820.0202
GLN 1830.0213
PHE 1840.0194
ALA 1850.0232
MET 1860.0236
VAL 1870.0299
ASN 1880.0138
ASN 1890.0188
GLY 1900.0156
PRO 1910.0473
GLY 1920.0339
PRO 1930.0083
GLY 1940.0155
GLU 1950.0183
SER 1960.0302
PHE 1970.0203
THR 1980.0188
ALA 1990.0188
GLN 2000.0045
PRO 2010.0028
ALA 2020.0084
ASP 2030.0176
MET 2040.0185
GLN 2050.0187
ALA 2060.0073
GLY 2070.0119
ILE 2080.0212
LYS 2090.0357
GLY 2100.0399
PRO 2110.0506
GLY 2120.0336
PRO 2130.0196
GLY 2140.0219
GLY 2150.0392
SER 2160.0275
ILE 2170.0343
GLN 2180.0176
VAL 2190.0174
ILE 2200.0125
ASN 2210.0137
GLY 2220.0133
SER 2230.0166
THR 2240.0211
ILE 2250.0224
GLY 2260.0217
THR 2270.0169
GLY 2280.0060
SER 2290.0068
LYS 2300.0090
LYS 2310.0092
THR 2320.0119
ILE 2330.0147
LEU 2340.0133
ILE 2350.0215
TYR 2360.0178
SER 2370.0197
ILE 2380.0156
ILE 2390.0123
GLY 2400.0098
VAL 2410.0103
LYS 2420.0102
LYS 2430.0172
GLY 2440.0199
THR 2450.0137
LEU 2460.0066
ALA 2470.0054
TRP 2480.0067
ALA 2490.0101
ARG 2500.0126
THR 2510.0141
GLY 2520.0103
PHE 2530.0060
SER 2540.0037
PRO 2550.0033
ALA 2560.0074
LYS 2570.0089
LYS 2580.0106
LEU 2590.0263
ASN 2600.0369
ALA 2610.0371
GLY 2620.0260
VAL 2630.0143
VAL 2640.0135
ARG 2650.0102
VAL 2660.0127
PHE 2670.0097
PHE 2680.0169
LEU 2690.0204
ASN 2700.0281
GLN 2710.0290
LYS 2720.0256
LYS 2730.0228
ALA 2740.0213
LYS 2750.0185
ASP 2760.0109
VAL 2770.0148
LEU 2780.0184
ARG 2790.0114
LYS 2800.0081
THR 2810.0174
SER 2820.0024
ARG 2830.0051
PRO 2840.0085
MET 2850.0196
VAL 2860.0229
ASP 2870.0196
LEU 2880.0163
THR 2890.0166
PHE 2900.0148
GLY 2910.0183
GLY 2920.0234

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Last modification: april 24th, 2026.