CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 66  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0647
THR 260.0022
LYS 270.0025
CYS 280.0027
THR 290.0031
VAL 300.0036
SER 310.0053
HIS 320.0057
GLU 330.0044
VAL 340.0040
ALA 350.0033
ASP 360.0025
CYS 370.0022
SER 380.0022
HIS 390.0020
LEU 400.0017
LYS 410.0030
LEU 420.0027
THR 430.0024
GLN 440.0024
VAL 450.0024
PRO 460.0030
ASP 470.0031
ASP 480.0036
LEU 490.0035
PRO 500.0035
THR 510.0035
ASN 520.0036
ILE 530.0035
THR 540.0035
VAL 550.0036
LEU 560.0030
ASN 570.0032
LEU 580.0030
THR 590.0032
HIS 600.0032
ASN 610.0035
GLN 620.0031
LEU 630.0026
ARG 640.0025
ARG 650.0022
LEU 660.0023
PRO 670.0018
ALA 680.0016
ALA 690.0019
ASN 700.0023
PHE 710.0024
THR 720.0025
ARG 730.0030
TYR 740.0029
SER 750.0027
GLN 760.0033
LEU 770.0033
THR 780.0036
SER 790.0038
LEU 800.0036
ASP 810.0040
VAL 820.0038
GLY 830.0044
PHE 840.0049
ASN 850.0044
THR 860.0047
ILE 870.0040
SER 880.0043
LYS 890.0035
LEU 900.0028
GLU 910.0019
PRO 920.0014
GLU 930.0011
LEU 940.0015
CYS 950.0014
GLN 960.0015
LYS 970.0019
LEU 980.0023
PRO 990.0023
MET 1000.0029
LEU 1010.0032
LYS 1020.0036
VAL 1030.0041
LEU 1040.0038
ASN 1050.0047
LEU 1060.0047
GLN 1070.0059
HIS 1080.0069
ASN 1090.0063
GLU 1100.0063
LEU 1110.0062
SER 1120.0067
GLN 1130.0060
LEU 1140.0044
SER 1150.0042
ASP 1160.0036
LYS 1170.0031
THR 1180.0025
PHE 1190.0012
ALA 1200.0018
PHE 1210.0013
CYS 1220.0013
THR 1230.0021
ASN 1240.0029
LEU 1250.0027
THR 1260.0039
GLU 1270.0041
LEU 1280.0035
HIS 1290.0048
LEU 1300.0050
MET 1310.0064
SER 1320.0077
ASN 1330.0071
SER 1340.0080
ILE 1350.0067
GLN 1360.0077
LYS 1370.0068
ILE 1380.0054
LYS 1390.0061
ASN 1400.0058
ASN 1410.0041
PRO 1420.0029
PHE 1430.0016
VAL 1440.0028
LYS 1450.0025
GLN 1460.0017
LYS 1470.0033
ASN 1480.0038
LEU 1490.0028
ILE 1500.0039
THR 1510.0038
LEU 1520.0029
ASP 1530.0043
LEU 1540.0044
SER 1550.0059
HIS 1560.0074
ASN 1570.0070
GLY 1580.0074
LEU 1590.0059
SER 1600.0060
SER 1610.0046
THR 1620.0029
LYS 1630.0034
LEU 1640.0027
GLY 1650.0037
THR 1660.0054
GLN 1670.0052
VAL 1680.0046
GLN 1690.0034
LEU 1700.0025
GLU 1710.0040
ASN 1720.0043
LEU 1730.0030
GLN 1740.0038
GLU 1750.0035
LEU 1760.0024
LEU 1770.0035
LEU 1780.0034
SER 1790.0047
ASN 1800.0060
ASN 1810.0055
LYS 1820.0056
ILE 1830.0040
GLN 1840.0040
ALA 1850.0030
LEU 1860.0023
LYS 1870.0029
SER 1880.0031
GLU 1890.0039
GLU 1900.0030
LEU 1910.0023
ASP 1920.0034
ILE 1930.0030
PHE 1940.0026
ALA 1950.0039
ASN 1960.0046
SER 1970.0035
SER 1980.0039
LEU 1990.0029
LYS 2000.0039
LYS 2010.0030
LEU 2020.0021
GLU 2030.0026
LEU 2040.0021
SER 2050.0031
SER 2060.0034
ASN 2070.0029
GLN 2080.0026
ILE 2090.0017
LYS 2100.0018
GLU 2110.0015
PHE 2120.0009
SER 2130.0017
PRO 2140.0022
GLY 2150.0022
CYS 2160.0017
PHE 2170.0014
HIS 2180.0022
ALA 2190.0025
ILE 2200.0023
GLY 2210.0032
ARG 2220.0030
LEU 2230.0023
PHE 2240.0028
GLY 2250.0024
LEU 2260.0016
PHE 2270.0017
LEU 2280.0016
ASN 2290.0018
ASN 2300.0017
VAL 2310.0017
GLN 2320.0022
LEU 2330.0022
GLY 2340.0026
PRO 2350.0025
SER 2360.0022
LEU 2370.0019
THR 2380.0019
GLU 2390.0020
LYS 2400.0017
LEU 2410.0014
CYS 2420.0015
LEU 2430.0014
GLU 2440.0012
LEU 2450.0014
ALA 2460.0013
ASN 2470.0014
THR 2480.0015
SER 2490.0016
ILE 2500.0014
ARG 2510.0009
ASN 2520.0010
LEU 2530.0011
SER 2540.0012
LEU 2550.0014
SER 2560.0019
ASN 2570.0029
SER 2580.0029
GLN 2590.0036
LEU 2600.0029
SER 2610.0038
THR 2620.0029
THR 2630.0020
SER 2640.0020
ASN 2650.0020
THR 2660.0020
THR 2670.0017
PHE 2680.0012
LEU 2690.0017
GLY 2700.0017
LEU 2710.0011
LYS 2720.0016
TRP 2730.0018
THR 2740.0012
ASN 2750.0011
LEU 2760.0011
THR 2770.0013
MET 2780.0011
LEU 2790.0007
ASP 2800.0011
LEU 2810.0012
SER 2820.0034
TYR 2830.0049
ASN 2840.0041
ASN 2850.0052
LEU 2860.0032
ASN 2870.0033
VAL 2880.0023
VAL 2890.0013
GLY 2900.0016
ASN 2910.0007
ASP 2920.0013
SER 2930.0005
PHE 2940.0008
ALA 2950.0018
TRP 2960.0017
LEU 2970.0016
PRO 2980.0026
GLN 2990.0027
LEU 3000.0022
GLU 3010.0033
TYR 3020.0030
PHE 3030.0028
PHE 3040.0029
LEU 3050.0030
GLU 3060.0059
TYR 3070.0066
ASN 3080.0047
ASN 3090.0048
ILE 3100.0024
GLN 3110.0028
HIS 3120.0025
LEU 3130.0025
PHE 3140.0023
SER 3150.0030
HIS 3160.0024
SER 3170.0019
LEU 3180.0024
HIS 3190.0025
GLY 3200.0026
LEU 3210.0030
PHE 3220.0036
ASN 3230.0036
VAL 3240.0034
ARG 3250.0039
TYR 3260.0045
LEU 3270.0045
ASN 3280.0047
LEU 3290.0053
LYS 3300.0064
ARG 3310.0084
SER 3320.0052
PHE 3330.0051
THR 3340.0057
LYS 3350.0088
GLN 3360.0098
SER 3370.0094
ILE 3380.0115
SER 3390.0091
LEU 3400.0043
ALA 3410.0052
SER 3420.0041
LEU 3430.0058
PRO 3440.0054
LYS 3450.0054
ILE 3460.0056
ASP 3470.0057
ASP 3480.0061
PHE 3490.0054
SER 3500.0045
PHE 3510.0044
GLN 3520.0046
TRP 3530.0039
LEU 3540.0037
LYS 3550.0040
CYS 3560.0034
LEU 3570.0034
GLU 3580.0030
HIS 3590.0031
LEU 3600.0038
ASN 3610.0048
MET 3620.0058
GLU 3630.0063
ASP 3640.0073
ASN 3650.0076
ASP 3660.0081
ILE 3670.0079
PRO 3680.0090
GLY 3690.0089
ILE 3700.0083
LYS 3710.0081
SER 3720.0081
ASN 3730.0075
MET 3740.0066
PHE 3750.0054
THR 3760.0057
GLY 3770.0054
LEU 3780.0040
ILE 3790.0038
ASN 3800.0026
LEU 3810.0019
LYS 3820.0018
TYR 3830.0018
LEU 3840.0024
SER 3850.0040
LEU 3860.0047
SER 3870.0058
ASN 3880.0077
SER 3890.0074
PHE 3900.0084
THR 3910.0100
SER 3920.0095
LEU 3930.0076
ARG 3940.0081
THR 3950.0067
LEU 3960.0045
THR 3970.0048
ASN 3980.0047
GLU 3990.0062
THR 4000.0049
PHE 4010.0036
VAL 4020.0055
SER 4030.0056
LEU 4040.0033
ALA 4050.0049
HIS 4060.0058
SER 4070.0036
PRO 4080.0045
LEU 4090.0031
HIS 4100.0052
ILE 4110.0057
LEU 4120.0040
ASN 4130.0055
LEU 4140.0049
THR 4150.0071
LYS 4160.0094
ASN 4170.0080
LYS 4180.0094
ILE 4190.0066
SER 4200.0072
LYS 4210.0052
ILE 4220.0029
GLU 4230.0012
SER 4240.0019
ASP 4250.0034
ALA 4260.0014
PHE 4270.0028
SER 4280.0052
TRP 4290.0050
LEU 4300.0048
GLY 4310.0083
HIS 4320.0087
LEU 4330.0078
GLU 4340.0104
VAL 4350.0104
LEU 4360.0085
ASP 4370.0092
LEU 4380.0078
GLY 4390.0099
LEU 4400.0110
ASN 4410.0097
GLU 4420.0098
ILE 4430.0080
GLY 4440.0082
GLN 4450.0065
GLU 4460.0069
LEU 4470.0072
THR 4480.0061
GLY 4490.0075
GLN 4500.0059
GLU 4510.0045
TRP 4520.0070
ARG 4530.0074
GLY 4540.0084
LEU 4550.0091
GLU 4560.0122
ASN 4570.0129
ILE 4580.0122
PHE 4590.0147
GLU 4600.0140
ILE 4610.0121
TYR 4620.0124
LEU 4630.0108
SER 4640.0123
TYR 4650.0124
ASN 4660.0106
LYS 4670.0103
TYR 4680.0095
LEU 4690.0091
GLN 4700.0085
LEU 4710.0092
THR 4720.0087
ARG 4730.0090
ASN 4740.0091
SER 4750.0094
PHE 4760.0106
ALA 4770.0108
LEU 4780.0102
VAL 4790.0115
PRO 4800.0134
SER 4810.0141
LEU 4820.0135
GLN 4830.0152
ARG 4840.0146
LEU 4850.0129
MET 4860.0132
LEU 4870.0119
ARG 4880.0126
ARG 4890.0122
VAL 4900.0110
ALA 4910.0107
LEU 4920.0103
LYS 4930.0092
ASN 4940.0086
VAL 4950.0095
ASP 4960.0079
SER 4970.0083
SER 4980.0080
PRO 4990.0088
SER 5000.0092
PRO 5010.0100
PHE 5020.0106
GLN 5030.0105
PRO 5040.0116
LEU 5050.0122
ARG 5060.0117
ASN 5070.0121
LEU 5080.0119
THR 5090.0124
ILE 5100.0122
LEU 5110.0115
ASP 5120.0114
LEU 5130.0099
SER 5140.0104
ASN 5150.0106
ASN 5160.0101
ASN 5170.0086
ILE 5180.0070
ALA 5190.0054
ASN 5200.0041
ILE 5210.0051
ASN 5220.0044
ASP 5230.0038
ASP 5240.0061
MET 5250.0069
LEU 5260.0082
GLU 5270.0082
GLY 5280.0092
LEU 5290.0094
GLU 5300.0092
LYS 5310.0097
LEU 5320.0090
GLU 5330.0092
ILE 5340.0089
LEU 5350.0080
ASP 5360.0073
LEU 5370.0055
GLN 5380.0065
HIS 5390.0079
ASN 5400.0064
ASN 5410.0077
LEU 5420.0049
ALA 5430.0068
ARG 5440.0076
LEU 5450.0050
TRP 5460.0071
LYS 5470.0103
HIS 5480.0122
ALA 5490.0137
ASN 5500.0109
PRO 5510.0120
GLY 5520.0107
GLY 5530.0107
PRO 5540.0076
ILE 5550.0037
TYR 5560.0035
PHE 5570.0025
LEU 5580.0027
LYS 5590.0052
GLY 5600.0074
LEU 5610.0059
SER 5620.0066
HIS 5630.0068
LEU 5640.0055
HIS 5650.0050
ILE 5660.0039
LEU 5670.0020
ASN 5680.0021
LEU 5690.0017
GLU 5700.0039
SER 5710.0070
ASN 5720.0062
GLY 5730.0085
PHE 5740.0077
ASP 5750.0104
GLU 5760.0102
ILE 5770.0087
PRO 5780.0095
VAL 5790.0102
GLU 5800.0092
VAL 5810.0060
PHE 5820.0057
LYS 5830.0078
ASP 5840.0075
LEU 5850.0053
PHE 5860.0064
GLU 5870.0053
LEU 5880.0040
LYS 5890.0033
ILE 5900.0030
ILE 5910.0038
ASP 5920.0038
LEU 5930.0055
GLY 5940.0059
LEU 5950.0072
ASN 5960.0084
ASN 5970.0097
LEU 5980.0095
ASN 5990.0104
THR 6000.0110
LEU 6010.0107
PRO 6020.0114
ALA 6030.0115
SER 6040.0106
VAL 6050.0097
PHE 6060.0082
ASN 6070.0094
ASN 6080.0083
GLN 6090.0069
VAL 6100.0073
SER 6110.0073
LEU 6120.0072
LYS 6130.0068
SER 6140.0068
LEU 6150.0073
ASN 6160.0090
LEU 6170.0089
GLN 6180.0089
LYS 6190.0092
ASN 6200.0091
LEU 6210.0100
ILE 6220.0091
THR 6230.0082
SER 6240.0076
VAL 6250.0076
GLU 6260.0078
LYS 6270.0076
LYS 6280.0086
VAL 6290.0093
PHE 6300.0087
GLY 6310.0085
PRO 6320.0085
ALA 6330.0086
PHE 6340.0086
ARG 6350.0087
ASN 6360.0093
LEU 6370.0094
THR 6380.0098
GLU 6390.0097
LEU 6400.0093
ASP 6410.0109
MET 6420.0099
ARG 6430.0106
PHE 6440.0112
ASN 6450.0100
PRO 6460.0126
PHE 6470.0092
ASP 6480.0075
CYS 6490.0067
THR 6500.0056
CYS 6510.0045
GLU 6520.0022
SER 6530.0037
ILE 6540.0036
ALA 6550.0015
TRP 6560.0032
PHE 6570.0046
VAL 6580.0036
ASN 6590.0029
TRP 6600.0047
ILE 6610.0050
ASN 6620.0034
GLU 6630.0055
THR 6640.0073
HIS 6650.0091
THR 6660.0101
ASN 6670.0111
ILE 6680.0104
PRO 6690.0122
GLU 6700.0120
LEU 6710.0102
SER 6720.0102
SER 6730.0129
HIS 6740.0131
TYR 6750.0105
LEU 6760.0134
CYS 6770.0126
ASN 6780.0161
THR 6790.0147
PRO 6800.0156
PRO 6810.0229
HIS 6820.0224
TYR 6830.0179
HIS 6840.0208
GLY 6850.0206
PHE 6860.0159
PRO 6870.0125
VAL 6880.0085
ARG 6890.0059
LEU 6900.0083
PHE 6910.0097
ASP 6920.0112
THR 6930.0094
SER 6940.0152
SER 6950.0169
CYS 6960.0140
GLU 10.0250
ALA 20.0290
ALA 30.0220
ALA 40.0136
LYS 50.0202
MET 60.0223
GLN 70.0173
ARG 80.0137
LEU 90.0204
VAL 100.0233
LEU 110.0165
LEU 120.0152
LEU 130.0205
ALA 140.0215
ILE 150.0180
SER 160.0173
LEU 170.0219
LEU 180.0230
LEU 190.0184
TYR 200.0193
GLN 210.0293
ASP 220.0306
LEU 230.0273
PRO 240.0351
VAL 250.0303
ARG 260.0218
SER 270.0117
GLU 280.0137
PHE 290.0155
GLU 300.0133
LEU 310.0046
ASP 320.0022
ARG 330.0052
ILE 340.0056
CYS 350.0061
GLY 360.0115
TYR 370.0161
GLY 380.0129
THR 390.0089
ALA 400.0032
ARG 410.0023
CYS 420.0014
ARG 430.0004
LYS 440.0012
LYS 450.0018
CYS 460.0039
ARG 470.0055
SER 480.0078
GLN 490.0075
GLU 500.0058
TYR 510.0062
ARG 520.0050
ILE 530.0060
GLY 540.0051
ARG 550.0039
CYS 560.0018
PRO 570.0019
ASN 580.0016
THR 590.0012
TYR 600.0012
ALA 610.0025
CYS 620.0033
CYS 630.0033
LEU 640.0045
ARG 650.0053
LYS 660.0098
TRP 670.0085
ASP 680.0070
GLU 690.0069
SER 700.0078
LEU 710.0090
LEU 720.0095
ASN 730.0087
ARG 740.0106
THR 750.0128
LYS 760.0135
PRO 770.0163
GLU 780.0174
ALA 790.0167
ALA 800.0207
ALA 810.0244
LYS 820.0228
LYS 830.0199
GLU 840.0191
MET 850.0161
ASN 860.0103
LEU 870.0089
SER 880.0058
VAL 890.0060
GLY 900.0074
LEU 910.0129
GLY 920.0248
GLY 930.0409
GLY 940.0411
SER 950.0312
ASN 960.0116
LEU 970.0111
SER 980.0083
VAL 990.0134
GLY 1000.0158
LEU 1010.0200
GLY 1020.0230
GLU 1030.0185
ILE 1040.0212
GLY 1050.0202
GLY 1060.0365
GLY 1070.0301
SER 1080.0248
LYS 1090.0130
LEU 1100.0101
LEU 1110.0072
ASP 1120.0035
ILE 1130.0044
ASN 1140.0095
LEU 1150.0124
GLY 1160.0269
ARG 1170.0378
GLY 1180.0286
GLY 1190.0232
GLY 1200.0154
SER 1210.0078
MET 1220.0088
VAL 1230.0070
ASP 1240.0075
LEU 1250.0061
THR 1260.0065
PHE 1270.0065
GLY 1280.0082
GLY 1290.0081
VAL 1300.0091
GLY 1310.0044
GLY 1320.0027
GLY 1330.0033
SER 1340.0030
THR 1350.0040
PHE 1360.0040
THR 1370.0051
PHE 1380.0055
PHE 1390.0067
PRO 1400.0072
LEU 1410.0050
VAL 1420.0065
ILE 1430.0136
GLY 1440.0208
GLY 1450.0291
GLY 1460.0177
SER 1470.0091
ASP 1480.0096
ALA 1490.0033
MET 1500.0049
TYR 1510.0069
LEU 1520.0058
GLY 1530.0070
PHE 1540.0060
ALA 1550.0068
ALA 1560.0052
GLY 1570.0061
GLY 1580.0058
GLY 1590.0065
SER 1600.0070
ALA 1610.0068
GLY 1620.0061
GLY 1630.0057
GLU 1640.0048
ASN 1650.0026
HIS 1660.0048
VAL 1670.0056
ALA 1680.0071
PHE 1690.0085
GLY 1700.0094
PRO 1710.0261
GLY 1720.0251
PRO 1730.0222
GLY 1740.0134
VAL 1750.0068
ASP 1760.0048
LEU 1770.0019
THR 1780.0042
PHE 1790.0044
GLY 1800.0085
GLY 1810.0138
VAL 1820.0126
GLN 1830.0094
PHE 1840.0063
ALA 1850.0047
MET 1860.0027
VAL 1870.0035
ASN 1880.0059
ASN 1890.0036
GLY 1900.0091
PRO 1910.0252
GLY 1920.0258
PRO 1930.0145
GLY 1940.0133
GLU 1950.0160
SER 1960.0270
PHE 1970.0201
THR 1980.0217
ALA 1990.0240
GLN 2000.0136
PRO 2010.0142
ALA 2020.0324
ASP 2030.0301
MET 2040.0450
GLN 2050.0647
ALA 2060.0485
GLY 2070.0343
ILE 2080.0418
LYS 2090.0367
GLY 2100.0354
PRO 2110.0180
GLY 2120.0176
PRO 2130.0168
GLY 2140.0255
GLY 2150.0191
SER 2160.0089
ILE 2170.0182
GLN 2180.0073
VAL 2190.0223
ILE 2200.0237
ASN 2210.0200
GLY 2220.0167
SER 2230.0102
THR 2240.0114
ILE 2250.0118
GLY 2260.0214
THR 2270.0315
GLY 2280.0306
SER 2290.0308
LYS 2300.0187
LYS 2310.0140
THR 2320.0081
ILE 2330.0131
LEU 2340.0203
ILE 2350.0267
TYR 2360.0204
SER 2370.0117
ILE 2380.0026
ILE 2390.0136
GLY 2400.0207
VAL 2410.0381
LYS 2420.0396
LYS 2430.0439
GLY 2440.0409
THR 2450.0352
LEU 2460.0187
ALA 2470.0071
TRP 2480.0092
ALA 2490.0217
ARG 2500.0332
THR 2510.0374
GLY 2520.0290
PHE 2530.0182
SER 2540.0091
PRO 2550.0122
ALA 2560.0130
LYS 2570.0102
LYS 2580.0124
LEU 2590.0150
ASN 2600.0163
ALA 2610.0326
GLY 2620.0227
VAL 2630.0168
VAL 2640.0143
ARG 2650.0055
VAL 2660.0081
PHE 2670.0069
PHE 2680.0079
LEU 2690.0119
ASN 2700.0122
GLN 2710.0147
LYS 2720.0099
LYS 2730.0079
ALA 2740.0097
LYS 2750.0082
ASP 2760.0072
VAL 2770.0057
LEU 2780.0166
ARG 2790.0177
LYS 2800.0094
THR 2810.0072
SER 2820.0091
ARG 2830.0090
PRO 2840.0107
MET 2850.0114
VAL 2860.0057
ASP 2870.0071
LEU 2880.0050
THR 2890.0055
PHE 2900.0030
GLY 2910.0041
GLY 2920.0092

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.