CNRS Nantes University US2B US2B
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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 74  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0575
THR 260.0132
LYS 270.0134
CYS 280.0132
THR 290.0135
VAL 300.0149
SER 310.0145
HIS 320.0162
GLU 330.0166
VAL 340.0145
ALA 350.0138
ASP 360.0125
CYS 370.0103
SER 380.0094
HIS 390.0079
LEU 400.0080
LYS 410.0066
LEU 420.0072
THR 430.0077
GLN 440.0080
VAL 450.0078
PRO 460.0119
ASP 470.0138
ASP 480.0164
LEU 490.0157
PRO 500.0180
THR 510.0164
ASN 520.0174
ILE 530.0149
THR 540.0143
VAL 550.0122
LEU 560.0093
ASN 570.0083
LEU 580.0058
THR 590.0053
HIS 600.0038
ASN 610.0041
GLN 620.0050
LEU 630.0032
ARG 640.0034
ARG 650.0023
LEU 660.0026
PRO 670.0027
ALA 680.0043
ALA 690.0053
ASN 700.0069
PHE 710.0073
THR 720.0084
ARG 730.0112
TYR 740.0113
SER 750.0120
GLN 760.0118
LEU 770.0095
THR 780.0102
SER 790.0080
LEU 800.0056
ASP 810.0050
VAL 820.0033
GLY 830.0028
PHE 840.0028
ASN 850.0032
THR 860.0044
ILE 870.0037
SER 880.0049
LYS 890.0053
LEU 900.0051
GLU 910.0053
PRO 920.0074
GLU 930.0078
LEU 940.0064
CYS 950.0078
GLN 960.0094
LYS 970.0087
LEU 980.0087
PRO 990.0108
MET 1000.0109
LEU 1010.0073
LYS 1020.0062
VAL 1030.0045
LEU 1040.0036
ASN 1050.0023
LEU 1060.0027
GLN 1070.0040
HIS 1080.0057
ASN 1090.0049
GLU 1100.0065
LEU 1110.0082
SER 1120.0107
GLN 1130.0114
LEU 1140.0101
SER 1150.0114
ASP 1160.0117
LYS 1170.0114
THR 1180.0086
PHE 1190.0073
ALA 1200.0097
PHE 1210.0096
CYS 1220.0073
THR 1230.0080
ASN 1240.0074
LEU 1250.0050
THR 1260.0035
GLU 1270.0039
LEU 1280.0037
HIS 1290.0052
LEU 1300.0062
MET 1310.0091
SER 1320.0105
ASN 1330.0098
SER 1340.0120
ILE 1350.0118
GLN 1360.0147
LYS 1370.0147
ILE 1380.0128
LYS 1390.0138
ASN 1400.0132
ASN 1410.0100
PRO 1420.0081
PHE 1430.0067
VAL 1440.0068
LYS 1450.0060
GLN 1460.0044
LYS 1470.0044
ASN 1480.0057
LEU 1490.0055
ILE 1500.0077
THR 1510.0085
LEU 1520.0087
ASP 1530.0101
LEU 1540.0111
SER 1550.0128
HIS 1560.0141
ASN 1570.0143
GLY 1580.0150
LEU 1590.0142
SER 1600.0147
SER 1610.0146
THR 1620.0136
LYS 1630.0127
LEU 1640.0115
GLY 1650.0108
THR 1660.0103
GLN 1670.0093
VAL 1680.0096
GLN 1690.0092
LEU 1700.0096
GLU 1710.0110
ASN 1720.0113
LEU 1730.0112
GLN 1740.0125
GLU 1750.0122
LEU 1760.0127
LEU 1770.0132
LEU 1780.0135
SER 1790.0141
ASN 1800.0148
ASN 1810.0149
LYS 1820.0139
ILE 1830.0124
GLN 1840.0110
ALA 1850.0109
LEU 1860.0114
LYS 1870.0125
SER 1880.0135
GLU 1890.0149
GLU 1900.0144
LEU 1910.0133
ASP 1920.0139
ILE 1930.0141
PHE 1940.0141
ALA 1950.0147
ASN 1960.0148
SER 1970.0144
SER 1980.0144
LEU 1990.0138
LYS 2000.0137
LYS 2010.0128
LEU 2020.0126
GLU 2030.0121
LEU 2040.0116
SER 2050.0110
SER 2060.0102
ASN 2070.0101
GLN 2080.0085
ILE 2090.0089
LYS 2100.0086
GLU 2110.0099
PHE 2120.0101
SER 2130.0125
PRO 2140.0128
GLY 2150.0130
CYS 2160.0129
PHE 2170.0119
HIS 2180.0132
ALA 2190.0152
ILE 2200.0147
GLY 2210.0161
ARG 2220.0146
LEU 2230.0128
PHE 2240.0118
GLY 2250.0105
LEU 2260.0086
PHE 2270.0079
LEU 2280.0065
ASN 2290.0061
ASN 2300.0054
VAL 2310.0048
GLN 2320.0043
LEU 2330.0054
GLY 2340.0073
PRO 2350.0087
SER 2360.0103
LEU 2370.0080
THR 2380.0060
GLU 2390.0084
LYS 2400.0094
LEU 2410.0070
CYS 2420.0063
LEU 2430.0091
GLU 2440.0097
LEU 2450.0075
ALA 2460.0093
ASN 2470.0100
THR 2480.0099
SER 2490.0093
ILE 2500.0075
ARG 2510.0050
ASN 2520.0050
LEU 2530.0034
SER 2540.0036
LEU 2550.0036
SER 2560.0047
ASN 2570.0045
SER 2580.0042
GLN 2590.0060
LEU 2600.0068
SER 2610.0089
THR 2620.0097
THR 2630.0089
SER 2640.0098
ASN 2650.0095
THR 2660.0103
THR 2670.0087
PHE 2680.0067
LEU 2690.0075
GLY 2700.0065
LEU 2710.0051
LYS 2720.0063
TRP 2730.0058
THR 2740.0037
ASN 2750.0031
LEU 2760.0034
THR 2770.0046
MET 2780.0050
LEU 2790.0053
ASP 2800.0058
LEU 2810.0066
SER 2820.0065
TYR 2830.0062
ASN 2840.0064
ASN 2850.0072
LEU 2860.0086
ASN 2870.0094
VAL 2880.0100
VAL 2890.0100
GLY 2900.0105
ASN 2910.0099
ASP 2920.0093
SER 2930.0089
PHE 2940.0085
ALA 2950.0086
TRP 2960.0077
LEU 2970.0070
PRO 2980.0070
GLN 2990.0062
LEU 3000.0066
GLU 3010.0066
TYR 3020.0067
PHE 3030.0069
PHE 3040.0070
LEU 3050.0073
GLU 3060.0075
TYR 3070.0069
ASN 3080.0072
ASN 3090.0077
ILE 3100.0086
GLN 3110.0090
HIS 3120.0089
LEU 3130.0093
PHE 3140.0093
SER 3150.0093
HIS 3160.0094
SER 3170.0094
LEU 3180.0092
HIS 3190.0089
GLY 3200.0086
LEU 3210.0079
PHE 3220.0078
ASN 3230.0078
VAL 3240.0079
ARG 3250.0079
TYR 3260.0074
LEU 3270.0068
ASN 3280.0068
LEU 3290.0061
LYS 3300.0062
ARG 3310.0061
SER 3320.0067
PHE 3330.0070
THR 3340.0068
LYS 3350.0062
GLN 3360.0070
SER 3370.0098
ILE 3380.0136
SER 3390.0174
LEU 3400.0157
ALA 3410.0093
SER 3420.0082
LEU 3430.0062
PRO 3440.0069
LYS 3450.0091
ILE 3460.0077
ASP 3470.0072
ASP 3480.0071
PHE 3490.0080
SER 3500.0087
PHE 3510.0078
GLN 3520.0076
TRP 3530.0079
LEU 3540.0082
LYS 3550.0082
CYS 3560.0071
LEU 3570.0068
GLU 3580.0076
HIS 3590.0075
LEU 3600.0063
ASN 3610.0060
MET 3620.0054
GLU 3630.0053
ASP 3640.0048
ASN 3650.0044
ASP 3660.0052
ILE 3670.0056
PRO 3680.0053
GLY 3690.0060
ILE 3700.0067
LYS 3710.0064
SER 3720.0074
ASN 3730.0077
MET 3740.0074
PHE 3750.0085
THR 3760.0073
GLY 3770.0075
LEU 3780.0080
ILE 3790.0082
ASN 3800.0087
LEU 3810.0079
LYS 3820.0087
TYR 3830.0079
LEU 3840.0065
SER 3850.0058
LEU 3860.0050
SER 3870.0038
ASN 3880.0032
SER 3890.0042
PHE 3900.0043
THR 3910.0034
SER 3920.0046
LEU 3930.0061
ARG 3940.0071
THR 3950.0091
LEU 3960.0080
THR 3970.0105
ASN 3980.0123
GLU 3990.0123
THR 4000.0098
PHE 4010.0091
VAL 4020.0109
SER 4030.0105
LEU 4040.0108
ALA 4050.0126
HIS 4060.0118
SER 4070.0109
PRO 4080.0112
LEU 4090.0095
HIS 4100.0090
ILE 4110.0079
LEU 4120.0066
ASN 4130.0050
LEU 4140.0037
THR 4150.0021
LYS 4160.0005
ASN 4170.0024
LYS 4180.0036
ILE 4190.0051
SER 4200.0070
LYS 4210.0078
ILE 4220.0074
GLU 4230.0100
SER 4240.0106
ASP 4250.0108
ALA 4260.0092
PHE 4270.0087
SER 4280.0112
TRP 4290.0122
LEU 4300.0108
GLY 4310.0111
HIS 4320.0114
LEU 4330.0090
GLU 4340.0082
VAL 4350.0068
LEU 4360.0046
ASP 4370.0034
LEU 4380.0011
GLY 4390.0027
LEU 4400.0041
ASN 4410.0035
GLU 4420.0056
ILE 4430.0057
GLY 4440.0080
GLN 4450.0082
GLU 4460.0078
LEU 4470.0057
THR 4480.0069
GLY 4490.0045
GLN 4500.0061
GLU 4510.0059
TRP 4520.0046
ARG 4530.0073
GLY 4540.0088
LEU 4550.0068
GLU 4560.0068
ASN 4570.0075
ILE 4580.0053
PHE 4590.0067
GLU 4600.0064
ILE 4610.0040
TYR 4620.0053
LEU 4630.0050
SER 4640.0076
TYR 4650.0084
ASN 4660.0067
LYS 4670.0087
TYR 4680.0090
LEU 4690.0074
GLN 4700.0080
LEU 4710.0069
THR 4720.0067
ARG 4730.0067
ASN 4740.0055
SER 4750.0054
PHE 4760.0049
ALA 4770.0045
LEU 4780.0019
VAL 4790.0034
PRO 4800.0052
SER 4810.0044
LEU 4820.0057
GLN 4830.0085
ARG 4840.0092
LEU 4850.0084
MET 4860.0092
LEU 4870.0094
ARG 4880.0104
ARG 4890.0106
VAL 4900.0096
ALA 4910.0105
LEU 4920.0096
LYS 4930.0100
ASN 4940.0098
VAL 4950.0109
ASP 4960.0103
SER 4970.0105
SER 4980.0119
PRO 4990.0123
SER 5000.0114
PRO 5010.0103
PHE 5020.0107
GLN 5030.0114
PRO 5040.0113
LEU 5050.0111
ARG 5060.0127
ASN 5070.0124
LEU 5080.0120
THR 5090.0128
ILE 5100.0120
LEU 5110.0116
ASP 5120.0112
LEU 5130.0110
SER 5140.0106
ASN 5150.0103
ASN 5160.0104
ASN 5170.0083
ILE 5180.0098
ALA 5190.0095
ASN 5200.0112
ILE 5210.0113
ASN 5220.0124
ASP 5230.0121
ASP 5240.0133
MET 5250.0129
LEU 5260.0124
GLU 5270.0137
GLY 5280.0149
LEU 5290.0140
GLU 5300.0143
LYS 5310.0145
LEU 5320.0131
GLU 5330.0124
ILE 5340.0113
LEU 5350.0106
ASP 5360.0092
LEU 5370.0081
GLN 5380.0063
HIS 5390.0056
ASN 5400.0071
ASN 5410.0073
LEU 5420.0078
ALA 5430.0076
ARG 5440.0120
LEU 5450.0117
TRP 5460.0105
LYS 5470.0147
HIS 5480.0179
ALA 5490.0221
ASN 5500.0208
PRO 5510.0265
GLY 5520.0263
GLY 5530.0204
PRO 5540.0137
ILE 5550.0131
TYR 5560.0102
PHE 5570.0113
LEU 5580.0091
LYS 5590.0100
GLY 5600.0115
LEU 5610.0104
SER 5620.0101
HIS 5630.0111
LEU 5640.0097
HIS 5650.0092
ILE 5660.0079
LEU 5670.0059
ASN 5680.0049
LEU 5690.0033
GLU 5700.0018
SER 5710.0018
ASN 5720.0040
GLY 5730.0062
PHE 5740.0064
ASP 5750.0096
GLU 5760.0103
ILE 5770.0072
PRO 5780.0083
VAL 5790.0068
GLU 5800.0056
VAL 5810.0051
PHE 5820.0032
LYS 5830.0040
ASP 5840.0053
LEU 5850.0049
PHE 5860.0040
GLU 5870.0058
LEU 5880.0043
LYS 5890.0056
ILE 5900.0044
ILE 5910.0037
ASP 5920.0041
LEU 5930.0043
GLY 5940.0058
LEU 5950.0064
ASN 5960.0069
ASN 5970.0078
LEU 5980.0078
ASN 5990.0088
THR 6000.0087
LEU 6010.0091
PRO 6020.0090
ALA 6030.0088
SER 6040.0068
VAL 6050.0056
PHE 6060.0051
ASN 6070.0053
ASN 6080.0032
GLN 6090.0037
VAL 6100.0052
SER 6110.0051
LEU 6120.0048
LYS 6130.0060
SER 6140.0058
LEU 6150.0060
ASN 6160.0080
LEU 6170.0081
GLN 6180.0094
LYS 6190.0100
ASN 6200.0092
LEU 6210.0090
ILE 6220.0080
THR 6230.0067
SER 6240.0060
VAL 6250.0062
GLU 6260.0076
LYS 6270.0080
LYS 6280.0084
VAL 6290.0084
PHE 6300.0081
GLY 6310.0077
PRO 6320.0070
ALA 6330.0070
PHE 6340.0075
ARG 6350.0073
ASN 6360.0062
LEU 6370.0065
THR 6380.0070
GLU 6390.0076
LEU 6400.0079
ASP 6410.0100
MET 6420.0088
ARG 6430.0099
PHE 6440.0101
ASN 6450.0087
PRO 6460.0077
PHE 6470.0043
ASP 6480.0035
CYS 6490.0029
THR 6500.0060
CYS 6510.0066
GLU 6520.0053
SER 6530.0029
ILE 6540.0019
ALA 6550.0055
TRP 6560.0044
PHE 6570.0052
VAL 6580.0062
ASN 6590.0070
TRP 6600.0080
ILE 6610.0084
ASN 6620.0094
GLU 6630.0096
THR 6640.0108
HIS 6650.0137
THR 6660.0077
ASN 6670.0091
ILE 6680.0093
PRO 6690.0110
GLU 6700.0120
LEU 6710.0106
SER 6720.0098
SER 6730.0099
HIS 6740.0094
TYR 6750.0068
LEU 6760.0043
CYS 6770.0018
ASN 6780.0067
THR 6790.0093
PRO 6800.0110
PRO 6810.0145
HIS 6820.0144
TYR 6830.0086
HIS 6840.0073
GLY 6850.0023
PHE 6860.0037
PRO 6870.0048
VAL 6880.0045
ARG 6890.0090
LEU 6900.0101
PHE 6910.0087
ASP 6920.0143
THR 6930.0151
SER 6940.0212
SER 6950.0206
CYS 6960.0176
GLU 10.0354
ALA 20.0313
ALA 30.0283
ALA 40.0202
LYS 50.0164
MET 60.0134
GLN 70.0107
ARG 80.0085
LEU 90.0080
VAL 100.0087
LEU 110.0065
LEU 120.0062
LEU 130.0068
ALA 140.0071
ILE 150.0068
SER 160.0055
LEU 170.0043
LEU 180.0046
LEU 190.0042
TYR 200.0056
GLN 210.0083
ASP 220.0114
LEU 230.0135
PRO 240.0162
VAL 250.0148
ARG 260.0169
SER 270.0150
GLU 280.0132
PHE 290.0135
GLU 300.0129
LEU 310.0099
ASP 320.0106
ARG 330.0088
ILE 340.0068
CYS 350.0067
GLY 360.0109
TYR 370.0163
GLY 380.0086
THR 390.0112
ALA 400.0062
ARG 410.0091
CYS 420.0103
ARG 430.0120
LYS 440.0141
LYS 450.0146
CYS 460.0170
ARG 470.0194
SER 480.0206
GLN 490.0177
GLU 500.0130
TYR 510.0103
ARG 520.0107
ILE 530.0098
GLY 540.0107
ARG 550.0113
CYS 560.0111
PRO 570.0112
ASN 580.0114
THR 590.0122
TYR 600.0118
ALA 610.0148
CYS 620.0101
CYS 630.0108
LEU 640.0094
ARG 650.0137
LYS 660.0201
TRP 670.0241
ASP 680.0222
GLU 690.0176
SER 700.0224
LEU 710.0252
LEU 720.0243
ASN 730.0169
ARG 740.0172
THR 750.0221
LYS 760.0205
PRO 770.0231
GLU 780.0182
ALA 790.0226
ALA 800.0294
ALA 810.0323
LYS 820.0236
LYS 830.0204
GLU 840.0183
MET 850.0136
ASN 860.0126
LEU 870.0068
SER 880.0076
VAL 890.0040
GLY 900.0057
LEU 910.0057
GLY 920.0094
GLY 930.0097
GLY 940.0118
SER 950.0083
ASN 960.0102
LEU 970.0095
SER 980.0134
VAL 990.0139
GLY 1000.0185
LEU 1010.0146
GLY 1020.0200
GLU 1030.0174
ILE 1040.0158
GLY 1050.0131
GLY 1060.0109
GLY 1070.0113
SER 1080.0112
LYS 1090.0106
LEU 1100.0119
LEU 1110.0136
ASP 1120.0134
ILE 1130.0115
ASN 1140.0117
LEU 1150.0099
GLY 1160.0249
ARG 1170.0291
GLY 1180.0304
GLY 1190.0197
GLY 1200.0047
SER 1210.0070
MET 1220.0083
VAL 1230.0068
ASP 1240.0070
LEU 1250.0064
THR 1260.0061
PHE 1270.0064
GLY 1280.0081
GLY 1290.0116
VAL 1300.0106
GLY 1310.0085
GLY 1320.0085
GLY 1330.0083
SER 1340.0097
THR 1350.0103
PHE 1360.0120
THR 1370.0111
PHE 1380.0090
PHE 1390.0079
PRO 1400.0060
LEU 1410.0029
VAL 1420.0200
ILE 1430.0281
GLY 1440.0465
GLY 1450.0575
GLY 1460.0361
SER 1470.0254
ASP 1480.0114
ALA 1490.0119
MET 1500.0056
TYR 1510.0064
LEU 1520.0076
GLY 1530.0088
PHE 1540.0116
ALA 1550.0122
ALA 1560.0101
GLY 1570.0083
GLY 1580.0083
GLY 1590.0074
SER 1600.0072
ALA 1610.0084
GLY 1620.0075
GLY 1630.0082
GLU 1640.0073
ASN 1650.0090
HIS 1660.0069
VAL 1670.0084
ALA 1680.0093
PHE 1690.0105
GLY 1700.0117
PRO 1710.0308
GLY 1720.0325
PRO 1730.0320
GLY 1740.0205
VAL 1750.0105
ASP 1760.0076
LEU 1770.0067
THR 1780.0073
PHE 1790.0065
GLY 1800.0068
GLY 1810.0107
VAL 1820.0066
GLN 1830.0076
PHE 1840.0044
ALA 1850.0075
MET 1860.0101
VAL 1870.0133
ASN 1880.0076
ASN 1890.0139
GLY 1900.0112
PRO 1910.0372
GLY 1920.0338
PRO 1930.0169
GLY 1940.0144
GLU 1950.0232
SER 1960.0430
PHE 1970.0269
THR 1980.0227
ALA 1990.0184
GLN 2000.0046
PRO 2010.0170
ALA 2020.0219
ASP 2030.0240
MET 2040.0222
GLN 2050.0276
ALA 2060.0194
GLY 2070.0160
ILE 2080.0162
LYS 2090.0183
GLY 2100.0201
PRO 2110.0111
GLY 2120.0147
PRO 2130.0173
GLY 2140.0163
GLY 2150.0126
SER 2160.0124
ILE 2170.0126
GLN 2180.0112
VAL 2190.0149
ILE 2200.0104
ASN 2210.0251
GLY 2220.0181
SER 2230.0149
THR 2240.0179
ILE 2250.0111
GLY 2260.0107
THR 2270.0126
GLY 2280.0179
SER 2290.0234
LYS 2300.0150
LYS 2310.0092
THR 2320.0049
ILE 2330.0046
LEU 2340.0065
ILE 2350.0074
TYR 2360.0058
SER 2370.0069
ILE 2380.0073
ILE 2390.0100
GLY 2400.0127
VAL 2410.0171
LYS 2420.0137
LYS 2430.0131
GLY 2440.0126
THR 2450.0120
LEU 2460.0105
ALA 2470.0059
TRP 2480.0068
ALA 2490.0136
ARG 2500.0189
THR 2510.0249
GLY 2520.0197
PHE 2530.0113
SER 2540.0072
PRO 2550.0099
ALA 2560.0122
LYS 2570.0120
LYS 2580.0072
LEU 2590.0087
ASN 2600.0101
ALA 2610.0175
GLY 2620.0112
VAL 2630.0059
VAL 2640.0046
ARG 2650.0050
VAL 2660.0030
PHE 2670.0042
PHE 2680.0071
LEU 2690.0070
ASN 2700.0060
GLN 2710.0020
LYS 2720.0056
LYS 2730.0062
ALA 2740.0102
LYS 2750.0114
ASP 2760.0081
VAL 2770.0135
LEU 2780.0207
ARG 2790.0170
LYS 2800.0088
THR 2810.0111
SER 2820.0032
ARG 2830.0070
PRO 2840.0122
MET 2850.0119
VAL 2860.0174
ASP 2870.0119
LEU 2880.0044
THR 2890.0044
PHE 2900.0110
GLY 2910.0061
GLY 2920.0162

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.