CNRS Nantes University US2B US2B
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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 75  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0625
THR 260.0076
LYS 270.0062
CYS 280.0047
THR 290.0036
VAL 300.0022
SER 310.0034
HIS 320.0030
GLU 330.0028
VAL 340.0023
ALA 350.0030
ASP 360.0029
CYS 370.0040
SER 380.0044
HIS 390.0056
LEU 400.0060
LYS 410.0074
LEU 420.0060
THR 430.0055
GLN 440.0054
VAL 450.0051
PRO 460.0076
ASP 470.0088
ASP 480.0099
LEU 490.0080
PRO 500.0085
THR 510.0090
ASN 520.0078
ILE 530.0060
THR 540.0056
VAL 550.0041
LEU 560.0029
ASN 570.0025
LEU 580.0032
THR 590.0035
HIS 600.0049
ASN 610.0063
GLN 620.0054
LEU 630.0038
ARG 640.0041
ARG 650.0043
LEU 660.0047
PRO 670.0046
ALA 680.0052
ALA 690.0060
ASN 700.0060
PHE 710.0061
THR 720.0078
ARG 730.0084
TYR 740.0070
SER 750.0078
GLN 760.0073
LEU 770.0062
THR 780.0059
SER 790.0052
LEU 800.0049
ASP 810.0041
VAL 820.0046
GLY 830.0058
PHE 840.0070
ASN 850.0065
THR 860.0091
ILE 870.0085
SER 880.0100
LYS 890.0094
LEU 900.0081
GLU 910.0070
PRO 920.0070
GLU 930.0060
LEU 940.0052
CYS 950.0054
GLN 960.0062
LYS 970.0055
LEU 980.0053
PRO 990.0060
MET 1000.0056
LEU 1010.0046
LYS 1020.0047
VAL 1030.0055
LEU 1040.0061
ASN 1050.0074
LEU 1060.0085
GLN 1070.0101
HIS 1080.0120
ASN 1090.0120
GLU 1100.0130
LEU 1110.0135
SER 1120.0148
GLN 1130.0142
LEU 1140.0117
SER 1150.0119
ASP 1160.0108
LYS 1170.0107
THR 1180.0095
PHE 1190.0069
ALA 1200.0076
PHE 1210.0060
CYS 1220.0044
THR 1230.0042
ASN 1240.0029
LEU 1250.0031
THR 1260.0036
GLU 1270.0051
LEU 1280.0060
HIS 1290.0081
LEU 1300.0094
MET 1310.0114
SER 1320.0139
ASN 1330.0137
SER 1340.0149
ILE 1350.0130
GLN 1360.0132
LYS 1370.0119
ILE 1380.0099
LYS 1390.0111
ASN 1400.0108
ASN 1410.0082
PRO 1420.0075
PHE 1430.0049
VAL 1440.0055
LYS 1450.0052
GLN 1460.0027
LYS 1470.0030
ASN 1480.0025
LEU 1490.0020
ILE 1500.0041
THR 1510.0047
LEU 1520.0045
ASP 1530.0069
LEU 1540.0075
SER 1550.0094
HIS 1560.0120
ASN 1570.0113
GLY 1580.0111
LEU 1590.0083
SER 1600.0072
SER 1610.0045
THR 1620.0030
LYS 1630.0022
LEU 1640.0028
GLY 1650.0039
THR 1660.0051
GLN 1670.0056
VAL 1680.0050
GLN 1690.0036
LEU 1700.0021
GLU 1710.0040
ASN 1720.0041
LEU 1730.0033
GLN 1740.0052
GLU 1750.0055
LEU 1760.0040
LEU 1770.0057
LEU 1780.0053
SER 1790.0077
ASN 1800.0091
ASN 1810.0083
LYS 1820.0069
ILE 1830.0047
GLN 1840.0048
ALA 1850.0049
LEU 1860.0052
LYS 1870.0046
SER 1880.0053
GLU 1890.0040
GLU 1900.0025
LEU 1910.0030
ASP 1920.0037
ILE 1930.0028
PHE 1940.0036
ALA 1950.0055
ASN 1960.0055
SER 1970.0049
SER 1980.0058
LEU 1990.0054
LYS 2000.0064
LYS 2010.0055
LEU 2020.0052
GLU 2030.0056
LEU 2040.0056
SER 2050.0068
SER 2060.0072
ASN 2070.0065
GLN 2080.0072
ILE 2090.0072
LYS 2100.0082
GLU 2110.0088
PHE 2120.0084
SER 2130.0086
PRO 2140.0093
GLY 2150.0086
CYS 2160.0072
PHE 2170.0072
HIS 2180.0076
ALA 2190.0066
ILE 2200.0062
GLY 2210.0060
ARG 2220.0059
LEU 2230.0058
PHE 2240.0057
GLY 2250.0056
LEU 2260.0046
PHE 2270.0048
LEU 2280.0056
ASN 2290.0057
ASN 2300.0065
VAL 2310.0070
GLN 2320.0086
LEU 2330.0086
GLY 2340.0094
PRO 2350.0093
SER 2360.0113
LEU 2370.0100
THR 2380.0085
GLU 2390.0096
LYS 2400.0098
LEU 2410.0089
CYS 2420.0087
LEU 2430.0097
GLU 2440.0090
LEU 2450.0079
ALA 2460.0086
ASN 2470.0085
THR 2480.0073
SER 2490.0061
ILE 2500.0055
ARG 2510.0037
ASN 2520.0028
LEU 2530.0030
SER 2540.0034
LEU 2550.0046
SER 2560.0041
ASN 2570.0056
SER 2580.0056
GLN 2590.0067
LEU 2600.0056
SER 2610.0066
THR 2620.0061
THR 2630.0052
SER 2640.0060
ASN 2650.0065
THR 2660.0088
THR 2670.0081
PHE 2680.0067
LEU 2690.0079
GLY 2700.0083
LEU 2710.0073
LYS 2720.0081
TRP 2730.0089
THR 2740.0072
ASN 2750.0067
LEU 2760.0052
THR 2770.0055
MET 2780.0043
LEU 2790.0030
ASP 2800.0036
LEU 2810.0044
SER 2820.0048
TYR 2830.0051
ASN 2840.0049
ASN 2850.0054
LEU 2860.0069
ASN 2870.0066
VAL 2880.0062
VAL 2890.0062
GLY 2900.0065
ASN 2910.0067
ASP 2920.0061
SER 2930.0062
PHE 2940.0055
ALA 2950.0059
TRP 2960.0065
LEU 2970.0060
PRO 2980.0073
GLN 2990.0075
LEU 3000.0065
GLU 3010.0080
TYR 3020.0073
PHE 3030.0057
PHE 3040.0057
LEU 3050.0048
GLU 3060.0052
TYR 3070.0048
ASN 3080.0056
ASN 3090.0060
ILE 3100.0069
GLN 3110.0070
HIS 3120.0069
LEU 3130.0069
PHE 3140.0076
SER 3150.0083
HIS 3160.0071
SER 3170.0068
LEU 3180.0064
HIS 3190.0069
GLY 3200.0076
LEU 3210.0075
PHE 3220.0083
ASN 3230.0089
VAL 3240.0079
ARG 3250.0085
TYR 3260.0073
LEU 3270.0057
ASN 3280.0055
LEU 3290.0044
LYS 3300.0057
ARG 3310.0033
SER 3320.0047
PHE 3330.0046
THR 3340.0040
LYS 3350.0031
GLN 3360.0052
SER 3370.0087
ILE 3380.0101
SER 3390.0118
LEU 3400.0092
ALA 3410.0029
SER 3420.0036
LEU 3430.0041
PRO 3440.0054
LYS 3450.0087
ILE 3460.0060
ASP 3470.0073
ASP 3480.0082
PHE 3490.0082
SER 3500.0073
PHE 3510.0058
GLN 3520.0070
TRP 3530.0079
LEU 3540.0075
LYS 3550.0083
CYS 3560.0092
LEU 3570.0075
GLU 3580.0078
HIS 3590.0074
LEU 3600.0057
ASN 3610.0050
MET 3620.0044
GLU 3630.0062
ASP 3640.0077
ASN 3650.0068
ASP 3660.0068
ILE 3670.0064
PRO 3680.0085
GLY 3690.0084
ILE 3700.0075
LYS 3710.0079
SER 3720.0087
ASN 3730.0080
MET 3740.0058
PHE 3750.0048
THR 3760.0065
GLY 3770.0077
LEU 3780.0065
ILE 3790.0076
ASN 3800.0079
LEU 3810.0057
LYS 3820.0062
TYR 3830.0062
LEU 3840.0047
SER 3850.0061
LEU 3860.0057
SER 3870.0081
ASN 3880.0094
SER 3890.0075
PHE 3900.0087
THR 3910.0111
SER 3920.0116
LEU 3930.0102
ARG 3940.0116
THR 3950.0109
LEU 3960.0086
THR 3970.0090
ASN 3980.0084
GLU 3990.0080
THR 4000.0069
PHE 4010.0049
VAL 4020.0062
SER 4030.0051
LEU 4040.0037
ALA 4050.0052
HIS 4060.0064
SER 4070.0050
PRO 4080.0051
LEU 4090.0037
HIS 4100.0046
ILE 4110.0049
LEU 4120.0044
ASN 4130.0064
LEU 4140.0073
THR 4150.0095
LYS 4160.0114
ASN 4170.0105
LYS 4180.0121
ILE 4190.0102
SER 4200.0113
LYS 4210.0096
ILE 4220.0076
GLU 4230.0077
SER 4240.0065
ASP 4250.0050
ALA 4260.0059
PHE 4270.0038
SER 4280.0041
TRP 4290.0035
LEU 4300.0018
GLY 4310.0017
HIS 4320.0022
LEU 4330.0024
GLU 4340.0038
VAL 4350.0049
LEU 4360.0047
ASP 4370.0063
LEU 4380.0069
GLY 4390.0086
LEU 4400.0100
ASN 4410.0105
GLU 4420.0107
ILE 4430.0088
GLY 4440.0087
GLN 4450.0070
GLU 4460.0042
LEU 4470.0038
THR 4480.0033
GLY 4490.0030
GLN 4500.0029
GLU 4510.0039
TRP 4520.0031
ARG 4530.0022
GLY 4540.0013
LEU 4550.0018
GLU 4560.0024
ASN 4570.0027
ILE 4580.0032
PHE 4590.0039
GLU 4600.0043
ILE 4610.0044
TYR 4620.0049
LEU 4630.0053
SER 4640.0062
TYR 4650.0070
ASN 4660.0076
LYS 4670.0075
TYR 4680.0061
LEU 4690.0050
GLN 4700.0040
LEU 4710.0044
THR 4720.0050
ARG 4730.0058
ASN 4740.0052
SER 4750.0040
PHE 4760.0038
ALA 4770.0043
LEU 4780.0037
VAL 4790.0037
PRO 4800.0045
SER 4810.0040
LEU 4820.0036
GLN 4830.0037
ARG 4840.0032
LEU 4850.0030
MET 4860.0036
LEU 4870.0036
ARG 4880.0039
ARG 4890.0043
VAL 4900.0040
ALA 4910.0056
LEU 4920.0051
LYS 4930.0053
ASN 4940.0056
VAL 4950.0060
ASP 4960.0082
SER 4970.0088
SER 4980.0102
PRO 4990.0094
SER 5000.0073
PRO 5010.0051
PHE 5020.0045
GLN 5030.0061
PRO 5040.0063
LEU 5050.0051
ARG 5060.0052
ASN 5070.0052
LEU 5080.0041
THR 5090.0040
ILE 5100.0031
LEU 5110.0017
ASP 5120.0014
LEU 5130.0019
SER 5140.0031
ASN 5150.0044
ASN 5160.0050
ASN 5170.0075
ILE 5180.0067
ALA 5190.0089
ASN 5200.0085
ILE 5210.0072
ASN 5220.0081
ASP 5230.0076
ASP 5240.0077
MET 5250.0060
LEU 5260.0044
GLU 5270.0064
GLY 5280.0073
LEU 5290.0056
GLU 5300.0069
LYS 5310.0069
LEU 5320.0048
GLU 5330.0051
ILE 5340.0039
LEU 5350.0019
ASP 5360.0034
LEU 5370.0035
GLN 5380.0057
HIS 5390.0074
ASN 5400.0069
ASN 5410.0088
LEU 5420.0069
ALA 5430.0091
ARG 5440.0106
LEU 5450.0082
TRP 5460.0072
LYS 5470.0102
HIS 5480.0104
ALA 5490.0140
ASN 5500.0134
PRO 5510.0175
GLY 5520.0163
GLY 5530.0125
PRO 5540.0086
ILE 5550.0071
TYR 5560.0051
PHE 5570.0044
LEU 5580.0033
LYS 5590.0048
GLY 5600.0062
LEU 5610.0055
SER 5620.0071
HIS 5630.0076
LEU 5640.0058
HIS 5650.0070
ILE 5660.0067
LEU 5670.0051
ASN 5680.0058
LEU 5690.0052
GLU 5700.0071
SER 5710.0089
ASN 5720.0075
GLY 5730.0090
PHE 5740.0075
ASP 5750.0084
GLU 5760.0077
ILE 5770.0057
PRO 5780.0049
VAL 5790.0041
GLU 5800.0042
VAL 5810.0042
PHE 5820.0045
LYS 5830.0048
ASP 5840.0057
LEU 5850.0059
PHE 5860.0071
GLU 5870.0081
LEU 5880.0069
LYS 5890.0081
ILE 5900.0078
ILE 5910.0073
ASP 5920.0077
LEU 5930.0071
GLY 5940.0080
LEU 5950.0083
ASN 5960.0086
ASN 5970.0085
LEU 5980.0082
ASN 5990.0085
THR 6000.0081
LEU 6010.0086
PRO 6020.0086
ALA 6030.0085
SER 6040.0079
VAL 6050.0077
PHE 6060.0068
ASN 6070.0067
ASN 6080.0066
GLN 6090.0068
VAL 6100.0070
SER 6110.0075
LEU 6120.0073
LYS 6130.0078
SER 6140.0078
LEU 6150.0073
ASN 6160.0079
LEU 6170.0081
GLN 6180.0076
LYS 6190.0077
ASN 6200.0083
LEU 6210.0098
ILE 6220.0094
THR 6230.0095
SER 6240.0097
VAL 6250.0090
GLU 6260.0100
LYS 6270.0105
LYS 6280.0123
VAL 6290.0113
PHE 6300.0094
GLY 6310.0088
PRO 6320.0088
ALA 6330.0081
PHE 6340.0075
ARG 6350.0077
ASN 6360.0062
LEU 6370.0059
THR 6380.0055
GLU 6390.0055
LEU 6400.0056
ASP 6410.0057
MET 6420.0062
ARG 6430.0051
PHE 6440.0065
ASN 6450.0073
PRO 6460.0105
PHE 6470.0076
ASP 6480.0086
CYS 6490.0057
THR 6500.0057
CYS 6510.0061
GLU 6520.0108
SER 6530.0098
ILE 6540.0058
ALA 6550.0072
TRP 6560.0079
PHE 6570.0052
VAL 6580.0043
ASN 6590.0077
TRP 6600.0074
ILE 6610.0055
ASN 6620.0093
GLU 6630.0097
THR 6640.0058
HIS 6650.0054
THR 6660.0023
ASN 6670.0013
ILE 6680.0009
PRO 6690.0006
GLU 6700.0010
LEU 6710.0027
SER 6720.0058
SER 6730.0064
HIS 6740.0050
TYR 6750.0039
LEU 6760.0093
CYS 6770.0103
ASN 6780.0156
THR 6790.0165
PRO 6800.0164
PRO 6810.0235
HIS 6820.0214
TYR 6830.0163
HIS 6840.0203
GLY 6850.0197
PHE 6860.0152
PRO 6870.0108
VAL 6880.0056
ARG 6890.0077
LEU 6900.0119
PHE 6910.0093
ASP 6920.0121
THR 6930.0123
SER 6940.0184
SER 6950.0138
CYS 6960.0135
GLU 10.0459
ALA 20.0473
ALA 30.0395
ALA 40.0259
LYS 50.0275
MET 60.0261
GLN 70.0180
ARG 80.0129
LEU 90.0181
VAL 100.0191
LEU 110.0081
LEU 120.0077
LEU 130.0112
ALA 140.0103
ILE 150.0061
SER 160.0077
LEU 170.0104
LEU 180.0087
LEU 190.0045
TYR 200.0066
GLN 210.0109
ASP 220.0102
LEU 230.0063
PRO 240.0103
VAL 250.0066
ARG 260.0045
SER 270.0055
GLU 280.0039
PHE 290.0020
GLU 300.0043
LEU 310.0071
ASP 320.0059
ARG 330.0041
ILE 340.0073
CYS 350.0094
GLY 360.0205
TYR 370.0281
GLY 380.0212
THR 390.0171
ALA 400.0055
ARG 410.0048
CYS 420.0049
ARG 430.0040
LYS 440.0041
LYS 450.0037
CYS 460.0060
ARG 470.0078
SER 480.0094
GLN 490.0095
GLU 500.0074
TYR 510.0066
ARG 520.0051
ILE 530.0051
GLY 540.0040
ARG 550.0030
CYS 560.0037
PRO 570.0049
ASN 580.0044
THR 590.0042
TYR 600.0030
ALA 610.0056
CYS 620.0056
CYS 630.0057
LEU 640.0060
ARG 650.0076
LYS 660.0128
TRP 670.0136
ASP 680.0117
GLU 690.0112
SER 700.0121
LEU 710.0154
LEU 720.0173
ASN 730.0154
ARG 740.0157
THR 750.0191
LYS 760.0179
PRO 770.0188
GLU 780.0264
ALA 790.0221
ALA 800.0162
ALA 810.0277
LYS 820.0233
LYS 830.0218
GLU 840.0186
MET 850.0164
ASN 860.0140
LEU 870.0106
SER 880.0104
VAL 890.0071
GLY 900.0081
LEU 910.0069
GLY 920.0076
GLY 930.0052
GLY 940.0072
SER 950.0053
ASN 960.0080
LEU 970.0053
SER 980.0094
VAL 990.0074
GLY 1000.0118
LEU 1010.0106
GLY 1020.0147
GLU 1030.0130
ILE 1040.0072
GLY 1050.0044
GLY 1060.0206
GLY 1070.0194
SER 1080.0191
LYS 1090.0123
LEU 1100.0131
LEU 1110.0149
ASP 1120.0148
ILE 1130.0125
ASN 1140.0131
LEU 1150.0115
GLY 1160.0306
ARG 1170.0347
GLY 1180.0327
GLY 1190.0210
GLY 1200.0060
SER 1210.0067
MET 1220.0076
VAL 1230.0071
ASP 1240.0079
LEU 1250.0077
THR 1260.0102
PHE 1270.0111
GLY 1280.0137
GLY 1290.0164
VAL 1300.0165
GLY 1310.0136
GLY 1320.0128
GLY 1330.0135
SER 1340.0119
THR 1350.0125
PHE 1360.0089
THR 1370.0089
PHE 1380.0049
PHE 1390.0068
PRO 1400.0053
LEU 1410.0117
VAL 1420.0252
ILE 1430.0226
GLY 1440.0375
GLY 1450.0388
GLY 1460.0117
SER 1470.0095
ASP 1480.0064
ALA 1490.0086
MET 1500.0072
TYR 1510.0055
LEU 1520.0062
GLY 1530.0077
PHE 1540.0087
ALA 1550.0100
ALA 1560.0113
GLY 1570.0111
GLY 1580.0112
GLY 1590.0116
SER 1600.0118
ALA 1610.0146
GLY 1620.0142
GLY 1630.0143
GLU 1640.0127
ASN 1650.0120
HIS 1660.0076
VAL 1670.0072
ALA 1680.0067
PHE 1690.0066
GLY 1700.0067
PRO 1710.0234
GLY 1720.0245
PRO 1730.0222
GLY 1740.0123
VAL 1750.0029
ASP 1760.0031
LEU 1770.0042
THR 1780.0025
PHE 1790.0070
GLY 1800.0052
GLY 1810.0096
VAL 1820.0142
GLN 1830.0155
PHE 1840.0193
ALA 1850.0236
MET 1860.0195
VAL 1870.0182
ASN 1880.0071
ASN 1890.0149
GLY 1900.0203
PRO 1910.0400
GLY 1920.0373
PRO 1930.0202
GLY 1940.0189
GLU 1950.0230
SER 1960.0249
PHE 1970.0220
THR 1980.0152
ALA 1990.0051
GLN 2000.0043
PRO 2010.0106
ALA 2020.0120
ASP 2030.0117
MET 2040.0135
GLN 2050.0202
ALA 2060.0223
GLY 2070.0118
ILE 2080.0291
LYS 2090.0239
GLY 2100.0282
PRO 2110.0271
GLY 2120.0163
PRO 2130.0162
GLY 2140.0250
GLY 2150.0129
SER 2160.0309
ILE 2170.0291
GLN 2180.0304
VAL 2190.0257
ILE 2200.0311
ASN 2210.0434
GLY 2220.0277
SER 2230.0448
THR 2240.0625
ILE 2250.0494
GLY 2260.0334
THR 2270.0151
GLY 2280.0291
SER 2290.0504
LYS 2300.0385
LYS 2310.0271
THR 2320.0229
ILE 2330.0207
LEU 2340.0119
ILE 2350.0164
TYR 2360.0082
SER 2370.0093
ILE 2380.0063
ILE 2390.0077
GLY 2400.0052
VAL 2410.0042
LYS 2420.0054
LYS 2430.0102
GLY 2440.0176
THR 2450.0170
LEU 2460.0077
ALA 2470.0100
TRP 2480.0097
ALA 2490.0132
ARG 2500.0145
THR 2510.0117
GLY 2520.0165
PHE 2530.0106
SER 2540.0161
PRO 2550.0112
ALA 2560.0241
LYS 2570.0318
LYS 2580.0291
LEU 2590.0153
ASN 2600.0163
ALA 2610.0396
GLY 2620.0278
VAL 2630.0197
VAL 2640.0223
ARG 2650.0080
VAL 2660.0080
PHE 2670.0081
PHE 2680.0071
LEU 2690.0081
ASN 2700.0105
GLN 2710.0116
LYS 2720.0101
LYS 2730.0086
ALA 2740.0072
LYS 2750.0071
ASP 2760.0058
VAL 2770.0050
LEU 2780.0055
ARG 2790.0063
LYS 2800.0069
THR 2810.0035
SER 2820.0046
ARG 2830.0038
PRO 2840.0109
MET 2850.0127
VAL 2860.0121
ASP 2870.0113
LEU 2880.0076
THR 2890.0069
PHE 2900.0047
GLY 2910.0060
GLY 2920.0075

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.