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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0696
THR 260.0067
LYS 270.0047
CYS 280.0025
THR 290.0012
VAL 300.0014
SER 310.0036
HIS 320.0050
GLU 330.0037
VAL 340.0031
ALA 350.0016
ASP 360.0029
CYS 370.0032
SER 380.0054
HIS 390.0073
LEU 400.0066
LYS 410.0058
LEU 420.0044
THR 430.0037
GLN 440.0036
VAL 450.0027
PRO 460.0024
ASP 470.0029
ASP 480.0031
LEU 490.0023
PRO 500.0026
THR 510.0026
ASN 520.0029
ILE 530.0023
THR 540.0029
VAL 550.0027
LEU 560.0019
ASN 570.0029
LEU 580.0028
THR 590.0044
HIS 600.0055
ASN 610.0036
GLN 620.0030
LEU 630.0020
ARG 640.0019
ARG 650.0027
LEU 660.0021
PRO 670.0028
ALA 680.0033
ALA 690.0037
ASN 700.0031
PHE 710.0026
THR 720.0031
ARG 730.0030
TYR 740.0026
SER 750.0029
GLN 760.0021
LEU 770.0018
THR 780.0020
SER 790.0016
LEU 800.0014
ASP 810.0016
VAL 820.0012
GLY 830.0019
PHE 840.0020
ASN 850.0013
THR 860.0010
ILE 870.0016
SER 880.0029
LYS 890.0034
LEU 900.0027
GLU 910.0032
PRO 920.0033
GLU 930.0036
LEU 940.0030
CYS 950.0027
GLN 960.0031
LYS 970.0032
LEU 980.0026
PRO 990.0026
MET 1000.0021
LEU 1010.0019
LYS 1020.0014
VAL 1030.0008
LEU 1040.0004
ASN 1050.0009
LEU 1060.0013
GLN 1070.0022
HIS 1080.0026
ASN 1090.0023
GLU 1100.0030
LEU 1110.0029
SER 1120.0039
GLN 1130.0039
LEU 1140.0030
SER 1150.0033
ASP 1160.0032
LYS 1170.0033
THR 1180.0026
PHE 1190.0020
ALA 1200.0026
PHE 1210.0028
CYS 1220.0022
THR 1230.0022
ASN 1240.0023
LEU 1250.0018
THR 1260.0025
GLU 1270.0024
LEU 1280.0018
HIS 1290.0024
LEU 1300.0025
MET 1310.0037
SER 1320.0042
ASN 1330.0036
SER 1340.0044
ILE 1350.0038
GLN 1360.0040
LYS 1370.0036
ILE 1380.0027
LYS 1390.0029
ASN 1400.0028
ASN 1410.0018
PRO 1420.0017
PHE 1430.0016
VAL 1440.0016
LYS 1450.0020
GLN 1460.0020
LYS 1470.0026
ASN 1480.0032
LEU 1490.0029
ILE 1500.0038
THR 1510.0038
LEU 1520.0032
ASP 1530.0037
LEU 1540.0036
SER 1550.0045
HIS 1560.0052
ASN 1570.0046
GLY 1580.0046
LEU 1590.0039
SER 1600.0040
SER 1610.0030
THR 1620.0029
LYS 1630.0022
LEU 1640.0023
GLY 1650.0016
THR 1660.0017
GLN 1670.0017
VAL 1680.0024
GLN 1690.0025
LEU 1700.0030
GLU 1710.0033
ASN 1720.0039
LEU 1730.0037
GLN 1740.0044
GLU 1750.0045
LEU 1760.0038
LEU 1770.0042
LEU 1780.0039
SER 1790.0047
ASN 1800.0051
ASN 1810.0045
LYS 1820.0040
ILE 1830.0032
GLN 1840.0029
ALA 1850.0024
LEU 1860.0022
LYS 1870.0019
SER 1880.0018
GLU 1890.0018
GLU 1900.0022
LEU 1910.0025
ASP 1920.0023
ILE 1930.0025
PHE 1940.0030
ALA 1950.0029
ASN 1960.0033
SER 1970.0035
SER 1980.0038
LEU 1990.0038
LYS 2000.0042
LYS 2010.0039
LEU 2020.0034
GLU 2030.0037
LEU 2040.0034
SER 2050.0039
SER 2060.0037
ASN 2070.0035
GLN 2080.0030
ILE 2090.0026
LYS 2100.0023
GLU 2110.0021
PHE 2120.0019
SER 2130.0017
PRO 2140.0014
GLY 2150.0017
CYS 2160.0022
PHE 2170.0024
HIS 2180.0023
ALA 2190.0026
ILE 2200.0030
GLY 2210.0030
ARG 2220.0029
LEU 2230.0028
PHE 2240.0028
GLY 2250.0028
LEU 2260.0020
PHE 2270.0022
LEU 2280.0020
ASN 2290.0023
ASN 2300.0024
VAL 2310.0020
GLN 2320.0018
LEU 2330.0015
GLY 2340.0013
PRO 2350.0013
SER 2360.0018
LEU 2370.0016
THR 2380.0013
GLU 2390.0014
LYS 2400.0015
LEU 2410.0017
CYS 2420.0014
LEU 2430.0013
GLU 2440.0015
LEU 2450.0014
ALA 2460.0014
ASN 2470.0014
THR 2480.0017
SER 2490.0017
ILE 2500.0018
ARG 2510.0011
ASN 2520.0009
LEU 2530.0008
SER 2540.0007
LEU 2550.0006
SER 2560.0007
ASN 2570.0006
SER 2580.0008
GLN 2590.0012
LEU 2600.0013
SER 2610.0017
THR 2620.0017
THR 2630.0017
SER 2640.0019
ASN 2650.0021
THR 2660.0016
THR 2670.0017
PHE 2680.0015
LEU 2690.0014
GLY 2700.0013
LEU 2710.0014
LYS 2720.0011
TRP 2730.0010
THR 2740.0012
ASN 2750.0012
LEU 2760.0020
THR 2770.0021
MET 2780.0019
LEU 2790.0015
ASP 2800.0015
LEU 2810.0025
SER 2820.0021
TYR 2830.0023
ASN 2840.0025
ASN 2850.0022
LEU 2860.0028
ASN 2870.0025
VAL 2880.0021
VAL 2890.0022
GLY 2900.0025
ASN 2910.0022
ASP 2920.0023
SER 2930.0022
PHE 2940.0024
ALA 2950.0027
TRP 2960.0019
LEU 2970.0022
PRO 2980.0025
GLN 2990.0027
LEU 3000.0027
GLU 3010.0037
TYR 3020.0034
PHE 3030.0025
PHE 3040.0024
LEU 3050.0019
GLU 3060.0027
TYR 3070.0027
ASN 3080.0027
ASN 3090.0027
ILE 3100.0029
GLN 3110.0031
HIS 3120.0025
LEU 3130.0021
PHE 3140.0025
SER 3150.0031
HIS 3160.0028
SER 3170.0024
LEU 3180.0026
HIS 3190.0030
GLY 3200.0035
LEU 3210.0033
PHE 3220.0040
ASN 3230.0043
VAL 3240.0038
ARG 3250.0043
TYR 3260.0036
LEU 3270.0025
ASN 3280.0020
LEU 3290.0013
LYS 3300.0020
ARG 3310.0035
SER 3320.0026
PHE 3330.0031
THR 3340.0036
LYS 3350.0054
GLN 3360.0085
SER 3370.0101
ILE 3380.0143
SER 3390.0153
LEU 3400.0113
ALA 3410.0092
SER 3420.0070
LEU 3430.0057
PRO 3440.0034
LYS 3450.0038
ILE 3460.0022
ASP 3470.0026
ASP 3480.0032
PHE 3490.0036
SER 3500.0029
PHE 3510.0032
GLN 3520.0038
TRP 3530.0040
LEU 3540.0040
LYS 3550.0047
CYS 3560.0050
LEU 3570.0043
GLU 3580.0047
HIS 3590.0041
LEU 3600.0033
ASN 3610.0023
MET 3620.0013
GLU 3630.0016
ASP 3640.0020
ASN 3650.0019
ASP 3660.0020
ILE 3670.0012
PRO 3680.0002
GLY 3690.0011
ILE 3700.0019
LYS 3710.0027
SER 3720.0032
ASN 3730.0034
MET 3740.0031
PHE 3750.0037
THR 3760.0042
GLY 3770.0045
LEU 3780.0045
ILE 3790.0049
ASN 3800.0050
LEU 3810.0044
LYS 3820.0046
TYR 3830.0043
LEU 3840.0038
SER 3850.0035
LEU 3860.0026
SER 3870.0030
ASN 3880.0026
SER 3890.0021
PHE 3900.0020
THR 3910.0038
SER 3920.0051
LEU 3930.0050
ARG 3940.0068
THR 3950.0073
LEU 3960.0066
THR 3970.0070
ASN 3980.0066
GLU 3990.0068
THR 4000.0064
PHE 4010.0050
VAL 4020.0050
SER 4030.0047
LEU 4040.0044
ALA 4050.0043
HIS 4060.0044
SER 4070.0043
PRO 4080.0040
LEU 4090.0040
HIS 4100.0038
ILE 4110.0037
LEU 4120.0040
ASN 4130.0043
LEU 4140.0046
THR 4150.0048
LYS 4160.0054
ASN 4170.0055
LYS 4180.0066
ILE 4190.0064
SER 4200.0075
LYS 4210.0073
ILE 4220.0062
GLU 4230.0067
SER 4240.0061
ASP 4250.0060
ALA 4260.0057
PHE 4270.0047
SER 4280.0049
TRP 4290.0048
LEU 4300.0039
GLY 4310.0037
HIS 4320.0026
LEU 4330.0025
GLU 4340.0015
VAL 4350.0023
LEU 4360.0030
ASP 4370.0038
LEU 4380.0044
GLY 4390.0048
LEU 4400.0058
ASN 4410.0065
GLU 4420.0072
ILE 4430.0063
GLY 4440.0067
GLN 4450.0060
GLU 4460.0044
LEU 4470.0033
THR 4480.0037
GLY 4490.0029
GLN 4500.0045
GLU 4510.0046
TRP 4520.0033
ARG 4530.0044
GLY 4540.0045
LEU 4550.0029
GLU 4560.0043
ASN 4570.0027
ILE 4580.0015
PHE 4590.0019
GLU 4600.0016
ILE 4610.0013
TYR 4620.0027
LEU 4630.0030
SER 4640.0041
TYR 4650.0053
ASN 4660.0055
LYS 4670.0065
TYR 4680.0054
LEU 4690.0038
GLN 4700.0030
LEU 4710.0017
THR 4720.0004
ARG 4730.0014
ASN 4740.0018
SER 4750.0008
PHE 4760.0008
ALA 4770.0025
LEU 4780.0029
VAL 4790.0020
PRO 4800.0033
SER 4810.0038
LEU 4820.0027
GLN 4830.0036
ARG 4840.0031
LEU 4850.0020
MET 4860.0027
LEU 4870.0028
ARG 4880.0039
ARG 4890.0044
VAL 4900.0036
ALA 4910.0048
LEU 4920.0038
LYS 4930.0034
ASN 4940.0027
VAL 4950.0034
ASP 4960.0046
SER 4970.0040
SER 4980.0045
PRO 4990.0044
SER 5000.0041
PRO 5010.0029
PHE 5020.0034
GLN 5030.0037
PRO 5040.0033
LEU 5050.0034
ARG 5060.0037
ASN 5070.0033
LEU 5080.0033
THR 5090.0034
ILE 5100.0034
LEU 5110.0032
ASP 5120.0033
LEU 5130.0034
SER 5140.0037
ASN 5150.0038
ASN 5160.0040
ASN 5170.0045
ILE 5180.0047
ALA 5190.0053
ASN 5200.0056
ILE 5210.0053
ASN 5220.0055
ASP 5230.0057
ASP 5240.0054
MET 5250.0049
LEU 5260.0045
GLU 5270.0048
GLY 5280.0045
LEU 5290.0040
GLU 5300.0037
LYS 5310.0029
LEU 5320.0029
GLU 5330.0025
ILE 5340.0025
LEU 5350.0029
ASP 5360.0027
LEU 5370.0031
GLN 5380.0030
HIS 5390.0036
ASN 5400.0040
ASN 5410.0047
LEU 5420.0042
ALA 5430.0045
ARG 5440.0056
LEU 5450.0051
TRP 5460.0037
LYS 5470.0045
HIS 5480.0048
ALA 5490.0066
ASN 5500.0073
PRO 5510.0104
GLY 5520.0104
GLY 5530.0080
PRO 5540.0056
ILE 5550.0053
TYR 5560.0041
PHE 5570.0042
LEU 5580.0034
LYS 5590.0038
GLY 5600.0038
LEU 5610.0030
SER 5620.0027
HIS 5630.0022
LEU 5640.0017
HIS 5650.0009
ILE 5660.0009
LEU 5670.0008
ASN 5680.0014
LEU 5690.0012
GLU 5700.0018
SER 5710.0031
ASN 5720.0029
GLY 5730.0032
PHE 5740.0019
ASP 5750.0022
GLU 5760.0022
ILE 5770.0015
PRO 5780.0014
VAL 5790.0017
GLU 5800.0022
VAL 5810.0015
PHE 5820.0014
LYS 5830.0021
ASP 5840.0024
LEU 5850.0017
PHE 5860.0024
GLU 5870.0020
LEU 5880.0014
LYS 5890.0020
ILE 5900.0023
ILE 5910.0024
ASP 5920.0026
LEU 5930.0027
GLY 5940.0032
LEU 5950.0034
ASN 5960.0042
ASN 5970.0047
LEU 5980.0045
ASN 5990.0056
THR 6000.0055
LEU 6010.0049
PRO 6020.0048
ALA 6030.0049
SER 6040.0045
VAL 6050.0042
PHE 6060.0040
ASN 6070.0042
ASN 6080.0032
GLN 6090.0032
VAL 6100.0038
SER 6110.0040
LEU 6120.0042
LYS 6130.0044
SER 6140.0046
LEU 6150.0049
ASN 6160.0052
LEU 6170.0054
GLN 6180.0053
LYS 6190.0055
ASN 6200.0058
LEU 6210.0074
ILE 6220.0070
THR 6230.0068
SER 6240.0067
VAL 6250.0063
GLU 6260.0063
LYS 6270.0061
LYS 6280.0069
VAL 6290.0067
PHE 6300.0060
GLY 6310.0058
PRO 6320.0052
ALA 6330.0051
PHE 6340.0056
ARG 6350.0055
ASN 6360.0053
LEU 6370.0053
THR 6380.0052
GLU 6390.0053
LEU 6400.0054
ASP 6410.0055
MET 6420.0056
ARG 6430.0054
PHE 6440.0060
ASN 6450.0060
PRO 6460.0074
PHE 6470.0052
ASP 6480.0043
CYS 6490.0019
THR 6500.0024
CYS 6510.0056
GLU 6520.0079
SER 6530.0067
ILE 6540.0045
ALA 6550.0055
TRP 6560.0044
PHE 6570.0035
VAL 6580.0020
ASN 6590.0032
TRP 6600.0034
ILE 6610.0016
ASN 6620.0025
GLU 6630.0040
THR 6640.0030
HIS 6650.0019
THR 6660.0040
ASN 6670.0041
ILE 6680.0040
PRO 6690.0045
GLU 6700.0044
LEU 6710.0028
SER 6720.0032
SER 6730.0050
HIS 6740.0053
TYR 6750.0039
LEU 6760.0064
CYS 6770.0055
ASN 6780.0083
THR 6790.0072
PRO 6800.0059
PRO 6810.0107
HIS 6820.0106
TYR 6830.0083
HIS 6840.0109
GLY 6850.0118
PHE 6860.0088
PRO 6870.0064
VAL 6880.0030
ARG 6890.0028
LEU 6900.0061
PHE 6910.0067
ASP 6920.0107
THR 6930.0112
SER 6940.0176
SER 6950.0171
CYS 6960.0162
GLU 10.0161
ALA 20.0166
ALA 30.0090
ALA 40.0047
LYS 50.0109
MET 60.0118
GLN 70.0089
ARG 80.0066
LEU 90.0119
VAL 100.0143
LEU 110.0091
LEU 120.0084
LEU 130.0127
ALA 140.0130
ILE 150.0098
SER 160.0117
LEU 170.0137
LEU 180.0128
LEU 190.0107
TYR 200.0118
GLN 210.0214
ASP 220.0226
LEU 230.0255
PRO 240.0337
VAL 250.0294
ARG 260.0231
SER 270.0192
GLU 280.0067
PHE 290.0155
GLU 300.0112
LEU 310.0028
ASP 320.0052
ARG 330.0075
ILE 340.0046
CYS 350.0082
GLY 360.0099
TYR 370.0115
GLY 380.0078
THR 390.0051
ALA 400.0046
ARG 410.0064
CYS 420.0070
ARG 430.0056
LYS 440.0061
LYS 450.0041
CYS 460.0029
ARG 470.0046
SER 480.0070
GLN 490.0061
GLU 500.0037
TYR 510.0035
ARG 520.0029
ILE 530.0056
GLY 540.0063
ARG 550.0072
CYS 560.0089
PRO 570.0111
ASN 580.0108
THR 590.0088
TYR 600.0074
ALA 610.0054
CYS 620.0051
CYS 630.0029
LEU 640.0036
ARG 650.0037
LYS 660.0095
TRP 670.0082
ASP 680.0063
GLU 690.0048
SER 700.0034
LEU 710.0052
LEU 720.0058
ASN 730.0043
ARG 740.0051
THR 750.0085
LYS 760.0099
PRO 770.0099
GLU 780.0098
ALA 790.0104
ALA 800.0111
ALA 810.0034
LYS 820.0032
LYS 830.0032
GLU 840.0044
MET 850.0053
ASN 860.0059
LEU 870.0075
SER 880.0074
VAL 890.0066
GLY 900.0092
LEU 910.0085
GLY 920.0258
GLY 930.0493
GLY 940.0560
SER 950.0397
ASN 960.0161
LEU 970.0100
SER 980.0076
VAL 990.0052
GLY 1000.0037
LEU 1010.0076
GLY 1020.0080
GLU 1030.0092
ILE 1040.0144
GLY 1050.0191
GLY 1060.0090
GLY 1070.0047
SER 1080.0067
LYS 1090.0101
LEU 1100.0167
LEU 1110.0154
ASP 1120.0209
ILE 1130.0162
ASN 1140.0251
LEU 1150.0215
GLY 1160.0331
ARG 1170.0563
GLY 1180.0696
GLY 1190.0622
GLY 1200.0351
SER 1210.0105
MET 1220.0091
VAL 1230.0094
ASP 1240.0087
LEU 1250.0084
THR 1260.0058
PHE 1270.0041
GLY 1280.0036
GLY 1290.0032
VAL 1300.0036
GLY 1310.0053
GLY 1320.0056
GLY 1330.0056
SER 1340.0056
THR 1350.0054
PHE 1360.0061
THR 1370.0063
PHE 1380.0081
PHE 1390.0089
PRO 1400.0109
LEU 1410.0158
VAL 1420.0358
ILE 1430.0384
GLY 1440.0571
GLY 1450.0665
GLY 1460.0194
SER 1470.0216
ASP 1480.0270
ALA 1490.0218
MET 1500.0177
TYR 1510.0085
LEU 1520.0081
GLY 1530.0077
PHE 1540.0071
ALA 1550.0078
ALA 1560.0055
GLY 1570.0049
GLY 1580.0046
GLY 1590.0043
SER 1600.0043
ALA 1610.0047
GLY 1620.0053
GLY 1630.0052
GLU 1640.0047
ASN 1650.0033
HIS 1660.0054
VAL 1670.0046
ALA 1680.0045
PHE 1690.0046
GLY 1700.0043
PRO 1710.0442
GLY 1720.0520
PRO 1730.0552
GLY 1740.0328
VAL 1750.0120
ASP 1760.0061
LEU 1770.0063
THR 1780.0087
PHE 1790.0098
GLY 1800.0127
GLY 1810.0211
VAL 1820.0176
GLN 1830.0129
PHE 1840.0087
ALA 1850.0061
MET 1860.0091
VAL 1870.0158
ASN 1880.0087
ASN 1890.0216
GLY 1900.0184
PRO 1910.0339
GLY 1920.0260
PRO 1930.0156
GLY 1940.0179
GLU 1950.0276
SER 1960.0581
PHE 1970.0380
THR 1980.0242
ALA 1990.0174
GLN 2000.0190
PRO 2010.0189
ALA 2020.0155
ASP 2030.0244
MET 2040.0236
GLN 2050.0197
ALA 2060.0196
GLY 2070.0129
ILE 2080.0089
LYS 2090.0036
GLY 2100.0048
PRO 2110.0059
GLY 2120.0055
PRO 2130.0034
GLY 2140.0061
GLY 2150.0068
SER 2160.0124
ILE 2170.0113
GLN 2180.0147
VAL 2190.0159
ILE 2200.0167
ASN 2210.0367
GLY 2220.0253
SER 2230.0134
THR 2240.0133
ILE 2250.0196
GLY 2260.0135
THR 2270.0049
GLY 2280.0100
SER 2290.0180
LYS 2300.0160
LYS 2310.0105
THR 2320.0115
ILE 2330.0152
LEU 2340.0135
ILE 2350.0246
TYR 2360.0280
SER 2370.0328
ILE 2380.0359
ILE 2390.0313
GLY 2400.0373
VAL 2410.0669
LYS 2420.0497
LYS 2430.0449
GLY 2440.0348
THR 2450.0292
LEU 2460.0270
ALA 2470.0147
TRP 2480.0112
ALA 2490.0161
ARG 2500.0159
THR 2510.0140
GLY 2520.0133
PHE 2530.0106
SER 2540.0119
PRO 2550.0059
ALA 2560.0097
LYS 2570.0094
LYS 2580.0070
LEU 2590.0081
ASN 2600.0067
ALA 2610.0236
GLY 2620.0131
VAL 2630.0173
VAL 2640.0185
ARG 2650.0086
VAL 2660.0099
PHE 2670.0115
PHE 2680.0234
LEU 2690.0247
ASN 2700.0320
GLN 2710.0189
LYS 2720.0166
LYS 2730.0269
ALA 2740.0269
LYS 2750.0209
ASP 2760.0227
VAL 2770.0254
LEU 2780.0526
ARG 2790.0512
LYS 2800.0255
THR 2810.0025
SER 2820.0129
ARG 2830.0031
PRO 2840.0099
MET 2850.0046
VAL 2860.0097
ASP 2870.0092
LEU 2880.0096
THR 2890.0095
PHE 2900.0117
GLY 2910.0145
GLY 2920.0167

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.