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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0977
THR 260.0072
LYS 270.0074
CYS 280.0071
THR 290.0073
VAL 300.0076
SER 310.0080
HIS 320.0077
GLU 330.0057
VAL 340.0061
ALA 350.0052
ASP 360.0059
CYS 370.0052
SER 380.0052
HIS 390.0052
LEU 400.0053
LYS 410.0061
LEU 420.0044
THR 430.0046
GLN 440.0035
VAL 450.0015
PRO 460.0017
ASP 470.0013
ASP 480.0014
LEU 490.0017
PRO 500.0026
THR 510.0023
ASN 520.0040
ILE 530.0038
THR 540.0049
VAL 550.0046
LEU 560.0030
ASN 570.0036
LEU 580.0027
THR 590.0037
HIS 600.0044
ASN 610.0041
GLN 620.0044
LEU 630.0029
ARG 640.0039
ARG 650.0036
LEU 660.0030
PRO 670.0046
ALA 680.0053
ALA 690.0058
ASN 700.0041
PHE 710.0039
THR 720.0056
ARG 730.0044
TYR 740.0040
SER 750.0061
GLN 760.0058
LEU 770.0048
THR 780.0054
SER 790.0042
LEU 800.0027
ASP 810.0022
VAL 820.0010
GLY 830.0018
PHE 840.0025
ASN 850.0021
THR 860.0025
ILE 870.0019
SER 880.0025
LYS 890.0030
LEU 900.0028
GLU 910.0037
PRO 920.0040
GLU 930.0051
LEU 940.0045
CYS 950.0046
GLN 960.0065
LYS 970.0060
LEU 980.0054
PRO 990.0066
MET 1000.0065
LEU 1010.0038
LYS 1020.0037
VAL 1030.0030
LEU 1040.0021
ASN 1050.0016
LEU 1060.0006
GLN 1070.0007
HIS 1080.0007
ASN 1090.0004
GLU 1100.0006
LEU 1110.0011
SER 1120.0013
GLN 1130.0015
LEU 1140.0016
SER 1150.0020
ASP 1160.0021
LYS 1170.0014
THR 1180.0010
PHE 1190.0019
ALA 1200.0024
PHE 1210.0021
CYS 1220.0022
THR 1230.0026
ASN 1240.0028
LEU 1250.0025
THR 1260.0027
GLU 1270.0022
LEU 1280.0014
HIS 1290.0010
LEU 1300.0006
MET 1310.0006
SER 1320.0012
ASN 1330.0011
SER 1340.0018
ILE 1350.0019
GLN 1360.0034
LYS 1370.0035
ILE 1380.0033
LYS 1390.0043
ASN 1400.0049
ASN 1410.0042
PRO 1420.0033
PHE 1430.0035
VAL 1440.0044
LYS 1450.0043
GLN 1460.0036
LYS 1470.0047
ASN 1480.0046
LEU 1490.0036
ILE 1500.0040
THR 1510.0030
LEU 1520.0021
ASP 1530.0013
LEU 1540.0005
SER 1550.0008
HIS 1560.0018
ASN 1570.0017
GLY 1580.0026
LEU 1590.0021
SER 1600.0027
SER 1610.0029
THR 1620.0021
LYS 1630.0032
LEU 1640.0035
GLY 1650.0048
THR 1660.0061
GLN 1670.0065
VAL 1680.0063
GLN 1690.0058
LEU 1700.0052
GLU 1710.0061
ASN 1720.0062
LEU 1730.0048
GLN 1740.0048
GLU 1750.0038
LEU 1760.0025
LEU 1770.0020
LEU 1780.0011
SER 1790.0019
ASN 1800.0025
ASN 1810.0020
LYS 1820.0027
ILE 1830.0021
GLN 1840.0029
ALA 1850.0022
LEU 1860.0024
LYS 1870.0026
SER 1880.0021
GLU 1890.0036
GLU 1900.0031
LEU 1910.0028
ASP 1920.0038
ILE 1930.0045
PHE 1940.0040
ALA 1950.0044
ASN 1960.0055
SER 1970.0048
SER 1980.0048
LEU 1990.0039
LYS 2000.0049
LYS 2010.0035
LEU 2020.0026
GLU 2030.0027
LEU 2040.0023
SER 2050.0031
SER 2060.0029
ASN 2070.0026
GLN 2080.0030
ILE 2090.0028
LYS 2100.0032
GLU 2110.0033
PHE 2120.0029
SER 2130.0030
PRO 2140.0031
GLY 2150.0026
CYS 2160.0024
PHE 2170.0020
HIS 2180.0018
ALA 2190.0020
ILE 2200.0025
GLY 2210.0023
ARG 2220.0026
LEU 2230.0026
PHE 2240.0036
GLY 2250.0037
LEU 2260.0030
PHE 2270.0031
LEU 2280.0031
ASN 2290.0034
ASN 2300.0034
VAL 2310.0032
GLN 2320.0031
LEU 2330.0034
GLY 2340.0030
PRO 2350.0031
SER 2360.0041
LEU 2370.0038
THR 2380.0037
GLU 2390.0043
LYS 2400.0044
LEU 2410.0042
CYS 2420.0047
LEU 2430.0048
GLU 2440.0042
LEU 2450.0042
ALA 2460.0050
ASN 2470.0050
THR 2480.0042
SER 2490.0041
ILE 2500.0039
ARG 2510.0040
ASN 2520.0036
LEU 2530.0034
SER 2540.0030
LEU 2550.0030
SER 2560.0020
ASN 2570.0018
SER 2580.0025
GLN 2590.0023
LEU 2600.0020
SER 2610.0022
THR 2620.0022
THR 2630.0018
SER 2640.0023
ASN 2650.0024
THR 2660.0042
THR 2670.0038
PHE 2680.0039
LEU 2690.0047
GLY 2700.0055
LEU 2710.0050
LYS 2720.0060
TRP 2730.0064
THR 2740.0056
ASN 2750.0056
LEU 2760.0042
THR 2770.0040
MET 2780.0034
LEU 2790.0028
ASP 2800.0023
LEU 2810.0024
SER 2820.0025
TYR 2830.0021
ASN 2840.0017
ASN 2850.0022
LEU 2860.0027
ASN 2870.0032
VAL 2880.0031
VAL 2890.0026
GLY 2900.0027
ASN 2910.0026
ASP 2920.0018
SER 2930.0020
PHE 2940.0016
ALA 2950.0015
TRP 2960.0029
LEU 2970.0028
PRO 2980.0033
GLN 2990.0036
LEU 3000.0029
GLU 3010.0028
TYR 3020.0027
PHE 3030.0019
PHE 3040.0017
LEU 3050.0015
GLU 3060.0034
TYR 3070.0033
ASN 3080.0031
ASN 3090.0034
ILE 3100.0033
GLN 3110.0038
HIS 3120.0039
LEU 3130.0036
PHE 3140.0036
SER 3150.0035
HIS 3160.0031
SER 3170.0024
LEU 3180.0018
HIS 3190.0020
GLY 3200.0015
LEU 3210.0011
PHE 3220.0015
ASN 3230.0016
VAL 3240.0016
ARG 3250.0024
TYR 3260.0024
LEU 3270.0018
ASN 3280.0015
LEU 3290.0018
LYS 3300.0019
ARG 3310.0029
SER 3320.0029
PHE 3330.0026
THR 3340.0025
LYS 3350.0025
GLN 3360.0018
SER 3370.0018
ILE 3380.0026
SER 3390.0023
LEU 3400.0018
ALA 3410.0024
SER 3420.0022
LEU 3430.0023
PRO 3440.0023
LYS 3450.0028
ILE 3460.0024
ASP 3470.0030
ASP 3480.0035
PHE 3490.0035
SER 3500.0029
PHE 3510.0027
GLN 3520.0036
TRP 3530.0030
LEU 3540.0027
LYS 3550.0035
CYS 3560.0033
LEU 3570.0030
GLU 3580.0035
HIS 3590.0031
LEU 3600.0026
ASN 3610.0020
MET 3620.0019
GLU 3630.0017
ASP 3640.0015
ASN 3650.0016
ASP 3660.0022
ILE 3670.0022
PRO 3680.0023
GLY 3690.0023
ILE 3700.0024
LYS 3710.0021
SER 3720.0028
ASN 3730.0030
MET 3740.0026
PHE 3750.0032
THR 3760.0038
GLY 3770.0042
LEU 3780.0041
ILE 3790.0049
ASN 3800.0049
LEU 3810.0045
LYS 3820.0048
TYR 3830.0045
LEU 3840.0038
SER 3850.0036
LEU 3860.0036
SER 3870.0037
ASN 3880.0034
SER 3890.0032
PHE 3900.0029
THR 3910.0032
SER 3920.0035
LEU 3930.0038
ARG 3940.0044
THR 3950.0047
LEU 3960.0044
THR 3970.0045
ASN 3980.0046
GLU 3990.0040
THR 4000.0039
PHE 4010.0036
VAL 4020.0034
SER 4030.0036
LEU 4040.0042
ALA 4050.0044
HIS 4060.0044
SER 4070.0045
PRO 4080.0052
LEU 4090.0049
HIS 4100.0055
ILE 4110.0051
LEU 4120.0047
ASN 4130.0049
LEU 4140.0044
THR 4150.0048
LYS 4160.0049
ASN 4170.0046
LYS 4180.0046
ILE 4190.0047
SER 4200.0048
LYS 4210.0048
ILE 4220.0047
GLU 4230.0047
SER 4240.0047
ASP 4250.0047
ALA 4260.0043
PHE 4270.0044
SER 4280.0043
TRP 4290.0043
LEU 4300.0046
GLY 4310.0042
HIS 4320.0044
LEU 4330.0045
GLU 4340.0047
VAL 4350.0048
LEU 4360.0045
ASP 4370.0048
LEU 4380.0045
GLY 4390.0050
LEU 4400.0053
ASN 4410.0055
GLU 4420.0052
ILE 4430.0047
GLY 4440.0045
GLN 4450.0041
GLU 4460.0034
LEU 4470.0032
THR 4480.0032
GLY 4490.0033
GLN 4500.0037
GLU 4510.0038
TRP 4520.0037
ARG 4530.0040
GLY 4540.0041
LEU 4550.0039
GLU 4560.0036
ASN 4570.0037
ILE 4580.0034
PHE 4590.0031
GLU 4600.0032
ILE 4610.0032
TYR 4620.0035
LEU 4630.0035
SER 4640.0039
TYR 4650.0041
ASN 4660.0047
LYS 4670.0049
TYR 4680.0041
LEU 4690.0035
GLN 4700.0032
LEU 4710.0031
THR 4720.0033
ARG 4730.0039
ASN 4740.0036
SER 4750.0030
PHE 4760.0023
ALA 4770.0029
LEU 4780.0031
VAL 4790.0029
PRO 4800.0031
SER 4810.0022
LEU 4820.0017
GLN 4830.0016
ARG 4840.0017
LEU 4850.0019
MET 4860.0025
LEU 4870.0025
ARG 4880.0025
ARG 4890.0028
VAL 4900.0029
ALA 4910.0035
LEU 4920.0031
LYS 4930.0033
ASN 4940.0035
VAL 4950.0038
ASP 4960.0048
SER 4970.0048
SER 4980.0052
PRO 4990.0050
SER 5000.0045
PRO 5010.0040
PHE 5020.0034
GLN 5030.0040
PRO 5040.0038
LEU 5050.0029
ARG 5060.0057
ASN 5070.0041
LEU 5080.0027
THR 5090.0014
ILE 5100.0019
LEU 5110.0023
ASP 5120.0022
LEU 5130.0020
SER 5140.0020
ASN 5150.0019
ASN 5160.0025
ASN 5170.0026
ILE 5180.0029
ALA 5190.0031
ASN 5200.0035
ILE 5210.0046
ASN 5220.0044
ASP 5230.0039
ASP 5240.0036
MET 5250.0037
LEU 5260.0044
GLU 5270.0049
GLY 5280.0046
LEU 5290.0038
GLU 5300.0038
LYS 5310.0023
LEU 5320.0023
GLU 5330.0024
ILE 5340.0024
LEU 5350.0027
ASP 5360.0029
LEU 5370.0024
GLN 5380.0029
HIS 5390.0034
ASN 5400.0030
ASN 5410.0058
LEU 5420.0048
ALA 5430.0052
ARG 5440.0060
LEU 5450.0052
TRP 5460.0056
LYS 5470.0076
HIS 5480.0096
ALA 5490.0118
ASN 5500.0114
PRO 5510.0171
GLY 5520.0160
GLY 5530.0131
PRO 5540.0084
ILE 5550.0056
TYR 5560.0046
PHE 5570.0037
LEU 5580.0033
LYS 5590.0040
GLY 5600.0044
LEU 5610.0039
SER 5620.0048
HIS 5630.0047
LEU 5640.0041
HIS 5650.0048
ILE 5660.0044
LEU 5670.0030
ASN 5680.0030
LEU 5690.0023
GLU 5700.0032
SER 5710.0045
ASN 5720.0039
GLY 5730.0044
PHE 5740.0034
ASP 5750.0037
GLU 5760.0042
ILE 5770.0036
PRO 5780.0048
VAL 5790.0054
GLU 5800.0055
VAL 5810.0037
PHE 5820.0038
LYS 5830.0051
ASP 5840.0052
LEU 5850.0045
PHE 5860.0056
GLU 5870.0058
LEU 5880.0046
LYS 5890.0052
ILE 5900.0045
ILE 5910.0033
ASP 5920.0034
LEU 5930.0026
GLY 5940.0036
LEU 5950.0042
ASN 5960.0036
ASN 5970.0036
LEU 5980.0025
ASN 5990.0024
THR 6000.0017
LEU 6010.0020
PRO 6020.0026
ALA 6030.0029
SER 6040.0036
VAL 6050.0031
PHE 6060.0029
ASN 6070.0042
ASN 6080.0045
GLN 6090.0042
VAL 6100.0054
SER 6110.0055
LEU 6120.0043
LYS 6130.0052
SER 6140.0045
LEU 6150.0031
ASN 6160.0036
LEU 6170.0032
GLN 6180.0038
LYS 6190.0039
ASN 6200.0033
LEU 6210.0033
ILE 6220.0032
THR 6230.0031
SER 6240.0030
VAL 6250.0030
GLU 6260.0016
LYS 6270.0015
LYS 6280.0009
VAL 6290.0007
PHE 6300.0012
GLY 6310.0012
PRO 6320.0019
ALA 6330.0017
PHE 6340.0024
ARG 6350.0032
ASN 6360.0041
LEU 6370.0038
THR 6380.0049
GLU 6390.0046
LEU 6400.0037
ASP 6410.0033
MET 6420.0032
ARG 6430.0031
PHE 6440.0031
ASN 6450.0031
PRO 6460.0038
PHE 6470.0041
ASP 6480.0054
CYS 6490.0055
THR 6500.0069
CYS 6510.0085
GLU 6520.0087
SER 6530.0064
ILE 6540.0048
ALA 6550.0066
TRP 6560.0034
PHE 6570.0025
VAL 6580.0016
ASN 6590.0029
TRP 6600.0035
ILE 6610.0064
ASN 6620.0085
GLU 6630.0095
THR 6640.0124
HIS 6650.0173
THR 6660.0033
ASN 6670.0025
ILE 6680.0024
PRO 6690.0021
GLU 6700.0022
LEU 6710.0020
SER 6720.0020
SER 6730.0018
HIS 6740.0017
TYR 6750.0017
LEU 6760.0006
CYS 6770.0027
ASN 6780.0042
THR 6790.0062
PRO 6800.0066
PRO 6810.0069
HIS 6820.0051
TYR 6830.0035
HIS 6840.0037
GLY 6850.0028
PHE 6860.0020
PRO 6870.0021
VAL 6880.0026
ARG 6890.0039
LEU 6900.0042
PHE 6910.0040
ASP 6920.0084
THR 6930.0114
SER 6940.0157
SER 6950.0161
CYS 6960.0175
GLU 10.0196
ALA 20.0187
ALA 30.0110
ALA 40.0083
LYS 50.0114
MET 60.0084
GLN 70.0047
ARG 80.0053
LEU 90.0068
VAL 100.0052
LEU 110.0028
LEU 120.0040
LEU 130.0049
ALA 140.0040
ILE 150.0040
SER 160.0075
LEU 170.0096
LEU 180.0081
LEU 190.0103
TYR 200.0135
GLN 210.0158
ASP 220.0156
LEU 230.0187
PRO 240.0205
VAL 250.0215
ARG 260.0128
SER 270.0077
GLU 280.0049
PHE 290.0068
GLU 300.0099
LEU 310.0085
ASP 320.0058
ARG 330.0060
ILE 340.0061
CYS 350.0049
GLY 360.0226
TYR 370.0296
GLY 380.0146
THR 390.0206
ALA 400.0062
ARG 410.0012
CYS 420.0015
ARG 430.0034
LYS 440.0048
LYS 450.0064
CYS 460.0091
ARG 470.0110
SER 480.0130
GLN 490.0077
GLU 500.0036
TYR 510.0078
ARG 520.0071
ILE 530.0070
GLY 540.0059
ARG 550.0047
CYS 560.0041
PRO 570.0038
ASN 580.0028
THR 590.0048
TYR 600.0047
ALA 610.0074
CYS 620.0037
CYS 630.0018
LEU 640.0037
ARG 650.0056
LYS 660.0200
TRP 670.0377
ASP 680.0250
GLU 690.0038
SER 700.0354
LEU 710.0424
LEU 720.0241
ASN 730.0125
ARG 740.0318
THR 750.0290
LYS 760.0171
PRO 770.0236
GLU 780.0218
ALA 790.0376
ALA 800.0403
ALA 810.0138
LYS 820.0131
LYS 830.0135
GLU 840.0116
MET 850.0131
ASN 860.0062
LEU 870.0086
SER 880.0087
VAL 890.0115
GLY 900.0123
LEU 910.0147
GLY 920.0140
GLY 930.0211
GLY 940.0202
SER 950.0207
ASN 960.0124
LEU 970.0124
SER 980.0087
VAL 990.0105
GLY 1000.0091
LEU 1010.0130
GLY 1020.0186
GLU 1030.0195
ILE 1040.0237
GLY 1050.0246
GLY 1060.0104
GLY 1070.0134
SER 1080.0144
LYS 1090.0139
LEU 1100.0172
LEU 1110.0139
ASP 1120.0116
ILE 1130.0090
ASN 1140.0127
LEU 1150.0135
GLY 1160.0235
ARG 1170.0345
GLY 1180.0351
GLY 1190.0332
GLY 1200.0254
SER 1210.0134
MET 1220.0124
VAL 1230.0094
ASP 1240.0094
LEU 1250.0082
THR 1260.0059
PHE 1270.0055
GLY 1280.0042
GLY 1290.0045
VAL 1300.0044
GLY 1310.0042
GLY 1320.0039
GLY 1330.0044
SER 1340.0034
THR 1350.0036
PHE 1360.0020
THR 1370.0018
PHE 1380.0011
PHE 1390.0029
PRO 1400.0028
LEU 1410.0075
VAL 1420.0086
ILE 1430.0042
GLY 1440.0061
GLY 1450.0048
GLY 1460.0095
SER 1470.0091
ASP 1480.0110
ALA 1490.0098
MET 1500.0090
TYR 1510.0047
LEU 1520.0036
GLY 1530.0034
PHE 1540.0028
ALA 1550.0035
ALA 1560.0033
GLY 1570.0046
GLY 1580.0056
GLY 1590.0060
SER 1600.0058
ALA 1610.0084
GLY 1620.0075
GLY 1630.0058
GLU 1640.0056
ASN 1650.0049
HIS 1660.0083
VAL 1670.0095
ALA 1680.0113
PHE 1690.0128
GLY 1700.0146
PRO 1710.0206
GLY 1720.0209
PRO 1730.0183
GLY 1740.0165
VAL 1750.0163
ASP 1760.0148
LEU 1770.0078
THR 1780.0147
PHE 1790.0209
GLY 1800.0334
GLY 1810.0659
VAL 1820.0589
GLN 1830.0396
PHE 1840.0267
ALA 1850.0143
MET 1860.0250
VAL 1870.0283
ASN 1880.0158
ASN 1890.0227
GLY 1900.0136
PRO 1910.0192
GLY 1920.0136
PRO 1930.0213
GLY 1940.0216
GLU 1950.0125
SER 1960.0453
PHE 1970.0153
THR 1980.0416
ALA 1990.0465
GLN 2000.0093
PRO 2010.0401
ALA 2020.0317
ASP 2030.0113
MET 2040.0125
GLN 2050.0133
ALA 2060.0977
GLY 2070.0591
ILE 2080.0336
LYS 2090.0181
GLY 2100.0623
PRO 2110.0677
GLY 2120.0482
PRO 2130.0124
GLY 2140.0286
GLY 2150.0106
SER 2160.0314
ILE 2170.0180
GLN 2180.0137
VAL 2190.0178
ILE 2200.0279
ASN 2210.0457
GLY 2220.0381
SER 2230.0195
THR 2240.0118
ILE 2250.0181
GLY 2260.0175
THR 2270.0075
GLY 2280.0079
SER 2290.0194
LYS 2300.0156
LYS 2310.0076
THR 2320.0076
ILE 2330.0044
LEU 2340.0034
ILE 2350.0022
TYR 2360.0033
SER 2370.0030
ILE 2380.0024
ILE 2390.0020
GLY 2400.0015
VAL 2410.0059
LYS 2420.0043
LYS 2430.0042
GLY 2440.0028
THR 2450.0015
LEU 2460.0016
ALA 2470.0010
TRP 2480.0014
ALA 2490.0025
ARG 2500.0028
THR 2510.0070
GLY 2520.0048
PHE 2530.0048
SER 2540.0049
PRO 2550.0043
ALA 2560.0078
LYS 2570.0028
LYS 2580.0011
LEU 2590.0032
ASN 2600.0028
ALA 2610.0157
GLY 2620.0132
VAL 2630.0096
VAL 2640.0078
ARG 2650.0055
VAL 2660.0065
PHE 2670.0054
PHE 2680.0064
LEU 2690.0019
ASN 2700.0048
GLN 2710.0029
LYS 2720.0022
LYS 2730.0031
ALA 2740.0026
LYS 2750.0052
ASP 2760.0051
VAL 2770.0047
LEU 2780.0018
ARG 2790.0026
LYS 2800.0040
THR 2810.0097
SER 2820.0100
ARG 2830.0045
PRO 2840.0038
MET 2850.0077
VAL 2860.0106
ASP 2870.0090
LEU 2880.0028
THR 2890.0019
PHE 2900.0064
GLY 2910.0068
GLY 2920.0102

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.