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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0738
THR 260.0049
LYS 270.0048
CYS 280.0046
THR 290.0047
VAL 300.0047
SER 310.0042
HIS 320.0042
GLU 330.0034
VAL 340.0039
ALA 350.0033
ASP 360.0042
CYS 370.0039
SER 380.0044
HIS 390.0048
LEU 400.0044
LYS 410.0072
LEU 420.0057
THR 430.0063
GLN 440.0049
VAL 450.0029
PRO 460.0024
ASP 470.0027
ASP 480.0019
LEU 490.0008
PRO 500.0026
THR 510.0031
ASN 520.0039
ILE 530.0031
THR 540.0040
VAL 550.0038
LEU 560.0025
ASN 570.0035
LEU 580.0035
THR 590.0048
HIS 600.0059
ASN 610.0063
GLN 620.0068
LEU 630.0050
ARG 640.0055
ARG 650.0041
LEU 660.0031
PRO 670.0042
ALA 680.0041
ALA 690.0054
ASN 700.0041
PHE 710.0031
THR 720.0049
ARG 730.0044
TYR 740.0033
SER 750.0048
GLN 760.0047
LEU 770.0035
THR 780.0044
SER 790.0037
LEU 800.0022
ASP 810.0031
VAL 820.0030
GLY 830.0043
PHE 840.0054
ASN 850.0050
THR 860.0047
ILE 870.0033
SER 880.0029
LYS 890.0023
LEU 900.0013
GLU 910.0022
PRO 920.0022
GLU 930.0033
LEU 940.0024
CYS 950.0026
GLN 960.0044
LYS 970.0041
LEU 980.0034
PRO 990.0048
MET 1000.0048
LEU 1010.0028
LYS 1020.0033
VAL 1030.0030
LEU 1040.0022
ASN 1050.0024
LEU 1060.0019
GLN 1070.0027
HIS 1080.0031
ASN 1090.0024
GLU 1100.0020
LEU 1110.0021
SER 1120.0025
GLN 1130.0028
LEU 1140.0026
SER 1150.0030
ASP 1160.0030
LYS 1170.0023
THR 1180.0018
PHE 1190.0021
ALA 1200.0026
PHE 1210.0020
CYS 1220.0020
THR 1230.0024
ASN 1240.0025
LEU 1250.0023
THR 1260.0020
GLU 1270.0017
LEU 1280.0018
HIS 1290.0018
LEU 1300.0020
MET 1310.0023
SER 1320.0025
ASN 1330.0025
SER 1340.0031
ILE 1350.0032
GLN 1360.0050
LYS 1370.0048
ILE 1380.0041
LYS 1390.0048
ASN 1400.0049
ASN 1410.0038
PRO 1420.0032
PHE 1430.0026
VAL 1440.0031
LYS 1450.0028
GLN 1460.0021
LYS 1470.0021
ASN 1480.0016
LEU 1490.0011
ILE 1500.0010
THR 1510.0006
LEU 1520.0010
ASP 1530.0017
LEU 1540.0023
SER 1550.0029
HIS 1560.0037
ASN 1570.0037
GLY 1580.0044
LEU 1590.0038
SER 1600.0042
SER 1610.0034
THR 1620.0021
LYS 1630.0021
LEU 1640.0019
GLY 1650.0027
THR 1660.0036
GLN 1670.0035
VAL 1680.0029
GLN 1690.0025
LEU 1700.0017
GLU 1710.0025
ASN 1720.0025
LEU 1730.0016
GLN 1740.0025
GLU 1750.0025
LEU 1760.0019
LEU 1770.0026
LEU 1780.0027
SER 1790.0037
ASN 1800.0045
ASN 1810.0042
LYS 1820.0044
ILE 1830.0034
GLN 1840.0036
ALA 1850.0027
LEU 1860.0023
LYS 1870.0011
SER 1880.0009
GLU 1890.0010
GLU 1900.0007
LEU 1910.0004
ASP 1920.0011
ILE 1930.0013
PHE 1940.0015
ALA 1950.0026
ASN 1960.0033
SER 1970.0028
SER 1980.0037
LEU 1990.0034
LYS 2000.0045
LYS 2010.0041
LEU 2020.0035
GLU 2030.0039
LEU 2040.0036
SER 2050.0044
SER 2060.0044
ASN 2070.0040
GLN 2080.0040
ILE 2090.0036
LYS 2100.0035
GLU 2110.0030
PHE 2120.0030
SER 2130.0024
PRO 2140.0025
GLY 2150.0027
CYS 2160.0024
PHE 2170.0031
HIS 2180.0031
ALA 2190.0024
ILE 2200.0028
GLY 2210.0032
ARG 2220.0037
LEU 2230.0038
PHE 2240.0046
GLY 2250.0046
LEU 2260.0040
PHE 2270.0042
LEU 2280.0040
ASN 2290.0044
ASN 2300.0044
VAL 2310.0040
GLN 2320.0038
LEU 2330.0037
GLY 2340.0033
PRO 2350.0031
SER 2360.0036
LEU 2370.0035
THR 2380.0035
GLU 2390.0035
LYS 2400.0036
LEU 2410.0038
CYS 2420.0039
LEU 2430.0037
GLU 2440.0037
LEU 2450.0040
ALA 2460.0039
ASN 2470.0040
THR 2480.0041
SER 2490.0042
ILE 2500.0042
ARG 2510.0035
ASN 2520.0035
LEU 2530.0033
SER 2540.0034
LEU 2550.0031
SER 2560.0020
ASN 2570.0022
SER 2580.0027
GLN 2590.0025
LEU 2600.0018
SER 2610.0022
THR 2620.0022
THR 2630.0018
SER 2640.0019
ASN 2650.0017
THR 2660.0025
THR 2670.0027
PHE 2680.0026
LEU 2690.0025
GLY 2700.0029
LEU 2710.0031
LYS 2720.0029
TRP 2730.0033
THR 2740.0033
ASN 2750.0031
LEU 2760.0021
THR 2770.0022
MET 2780.0022
LEU 2790.0020
ASP 2800.0020
LEU 2810.0014
SER 2820.0017
TYR 2830.0017
ASN 2840.0014
ASN 2850.0018
LEU 2860.0021
ASN 2870.0023
VAL 2880.0025
VAL 2890.0024
GLY 2900.0027
ASN 2910.0025
ASP 2920.0019
SER 2930.0018
PHE 2940.0014
ALA 2950.0014
TRP 2960.0018
LEU 2970.0018
PRO 2980.0017
GLN 2990.0018
LEU 3000.0018
GLU 3010.0015
TYR 3020.0012
PHE 3030.0008
PHE 3040.0010
LEU 3050.0013
GLU 3060.0028
TYR 3070.0027
ASN 3080.0025
ASN 3090.0022
ILE 3100.0022
GLN 3110.0024
HIS 3120.0025
LEU 3130.0026
PHE 3140.0027
SER 3150.0028
HIS 3160.0026
SER 3170.0022
LEU 3180.0017
HIS 3190.0019
GLY 3200.0018
LEU 3210.0017
PHE 3220.0020
ASN 3230.0019
VAL 3240.0017
ARG 3250.0019
TYR 3260.0011
LEU 3270.0009
ASN 3280.0012
LEU 3290.0016
LYS 3300.0020
ARG 3310.0019
SER 3320.0023
PHE 3330.0014
THR 3340.0005
LYS 3350.0010
GLN 3360.0035
SER 3370.0050
ILE 3380.0082
SER 3390.0090
LEU 3400.0061
ALA 3410.0040
SER 3420.0026
LEU 3430.0022
PRO 3440.0018
LYS 3450.0034
ILE 3460.0021
ASP 3470.0021
ASP 3480.0021
PHE 3490.0021
SER 3500.0019
PHE 3510.0017
GLN 3520.0022
TRP 3530.0020
LEU 3540.0019
LYS 3550.0024
CYS 3560.0024
LEU 3570.0020
GLU 3580.0023
HIS 3590.0021
LEU 3600.0016
ASN 3610.0019
MET 3620.0018
GLU 3630.0020
ASP 3640.0021
ASN 3650.0019
ASP 3660.0017
ILE 3670.0018
PRO 3680.0018
GLY 3690.0019
ILE 3700.0019
LYS 3710.0013
SER 3720.0014
ASN 3730.0015
MET 3740.0013
PHE 3750.0016
THR 3760.0018
GLY 3770.0021
LEU 3780.0020
ILE 3790.0026
ASN 3800.0026
LEU 3810.0023
LYS 3820.0027
TYR 3830.0026
LEU 3840.0020
SER 3850.0023
LEU 3860.0023
SER 3870.0026
ASN 3880.0026
SER 3890.0023
PHE 3900.0022
THR 3910.0026
SER 3920.0024
LEU 3930.0021
ARG 3940.0021
THR 3950.0017
LEU 3960.0013
THR 3970.0008
ASN 3980.0006
GLU 3990.0004
THR 4000.0008
PHE 4010.0010
VAL 4020.0009
SER 4030.0010
LEU 4040.0014
ALA 4050.0017
HIS 4060.0021
SER 4070.0019
PRO 4080.0024
LEU 4090.0022
HIS 4100.0027
ILE 4110.0026
LEU 4120.0021
ASN 4130.0023
LEU 4140.0021
THR 4150.0026
LYS 4160.0030
ASN 4170.0026
LYS 4180.0025
ILE 4190.0021
SER 4200.0019
LYS 4210.0012
ILE 4220.0011
GLU 4230.0006
SER 4240.0006
ASP 4250.0010
ALA 4260.0008
PHE 4270.0012
SER 4280.0012
TRP 4290.0012
LEU 4300.0015
GLY 4310.0017
HIS 4320.0019
LEU 4330.0017
GLU 4340.0020
VAL 4350.0019
LEU 4360.0017
ASP 4370.0018
LEU 4380.0016
GLY 4390.0020
LEU 4400.0022
ASN 4410.0022
GLU 4420.0018
ILE 4430.0015
GLY 4440.0011
GLN 4450.0008
GLU 4460.0014
LEU 4470.0015
THR 4480.0014
GLY 4490.0015
GLN 4500.0015
GLU 4510.0012
TRP 4520.0012
ARG 4530.0013
GLY 4540.0015
LEU 4550.0014
GLU 4560.0016
ASN 4570.0016
ILE 4580.0014
PHE 4590.0015
GLU 4600.0013
ILE 4610.0014
TYR 4620.0014
LEU 4630.0014
SER 4640.0015
TYR 4650.0015
ASN 4660.0014
LYS 4670.0010
TYR 4680.0009
LEU 4690.0013
GLN 4700.0014
LEU 4710.0019
THR 4720.0022
ARG 4730.0023
ASN 4740.0024
SER 4750.0022
PHE 4760.0017
ALA 4770.0017
LEU 4780.0018
VAL 4790.0016
PRO 4800.0013
SER 4810.0011
LEU 4820.0013
GLN 4830.0011
ARG 4840.0014
LEU 4850.0017
MET 4860.0019
LEU 4870.0017
ARG 4880.0017
ARG 4890.0015
VAL 4900.0014
ALA 4910.0013
LEU 4920.0017
LYS 4930.0017
ASN 4940.0021
VAL 4950.0025
ASP 4960.0026
SER 4970.0027
SER 4980.0029
PRO 4990.0030
SER 5000.0028
PRO 5010.0024
PHE 5020.0020
GLN 5030.0018
PRO 5040.0018
LEU 5050.0016
ARG 5060.0014
ASN 5070.0017
LEU 5080.0010
THR 5090.0013
ILE 5100.0027
LEU 5110.0025
ASP 5120.0023
LEU 5130.0022
SER 5140.0020
ASN 5150.0018
ASN 5160.0020
ASN 5170.0019
ILE 5180.0023
ALA 5190.0025
ASN 5200.0030
ILE 5210.0029
ASN 5220.0031
ASP 5230.0032
ASP 5240.0033
MET 5250.0031
LEU 5260.0021
GLU 5270.0014
GLY 5280.0010
LEU 5290.0010
GLU 5300.0014
LYS 5310.0008
LEU 5320.0015
GLU 5330.0024
ILE 5340.0031
LEU 5350.0032
ASP 5360.0026
LEU 5370.0025
GLN 5380.0018
HIS 5390.0015
ASN 5400.0020
ASN 5410.0024
LEU 5420.0032
ALA 5430.0035
ARG 5440.0045
LEU 5450.0048
TRP 5460.0048
LYS 5470.0060
HIS 5480.0074
ALA 5490.0085
ASN 5500.0079
PRO 5510.0097
GLY 5520.0102
GLY 5530.0086
PRO 5540.0062
ILE 5550.0056
TYR 5560.0040
PHE 5570.0039
LEU 5580.0034
LYS 5590.0040
GLY 5600.0044
LEU 5610.0028
SER 5620.0030
HIS 5630.0029
LEU 5640.0029
HIS 5650.0029
ILE 5660.0030
LEU 5670.0027
ASN 5680.0021
LEU 5690.0020
GLU 5700.0014
SER 5710.0015
ASN 5720.0022
GLY 5730.0027
PHE 5740.0031
ASP 5750.0038
GLU 5760.0040
ILE 5770.0035
PRO 5780.0044
VAL 5790.0043
GLU 5800.0045
VAL 5810.0032
PHE 5820.0028
LYS 5830.0036
ASP 5840.0038
LEU 5850.0031
PHE 5860.0023
GLU 5870.0023
LEU 5880.0023
LYS 5890.0021
ILE 5900.0022
ILE 5910.0017
ASP 5920.0012
LEU 5930.0015
GLY 5940.0011
LEU 5950.0014
ASN 5960.0022
ASN 5970.0025
LEU 5980.0024
ASN 5990.0025
THR 6000.0027
LEU 6010.0029
PRO 6020.0034
ALA 6030.0033
SER 6040.0029
VAL 6050.0027
PHE 6060.0016
ASN 6070.0021
ASN 6080.0023
GLN 6090.0017
VAL 6100.0019
SER 6110.0017
LEU 6120.0014
LYS 6130.0011
SER 6140.0010
LEU 6150.0009
ASN 6160.0012
LEU 6170.0015
GLN 6180.0014
LYS 6190.0017
ASN 6200.0019
LEU 6210.0018
ILE 6220.0017
THR 6230.0012
SER 6240.0013
VAL 6250.0017
GLU 6260.0018
LYS 6270.0018
LYS 6280.0018
VAL 6290.0015
PHE 6300.0014
GLY 6310.0014
PRO 6320.0012
ALA 6330.0009
PHE 6340.0009
ARG 6350.0008
ASN 6360.0009
LEU 6370.0009
THR 6380.0011
GLU 6390.0010
LEU 6400.0009
ASP 6410.0015
MET 6420.0015
ARG 6430.0015
PHE 6440.0015
ASN 6450.0016
PRO 6460.0015
PHE 6470.0016
ASP 6480.0023
CYS 6490.0026
THR 6500.0033
CYS 6510.0021
GLU 6520.0025
SER 6530.0019
ILE 6540.0014
ALA 6550.0013
TRP 6560.0019
PHE 6570.0017
VAL 6580.0019
ASN 6590.0021
TRP 6600.0019
ILE 6610.0028
ASN 6620.0032
GLU 6630.0019
THR 6640.0019
HIS 6650.0032
THR 6660.0013
ASN 6670.0014
ILE 6680.0011
PRO 6690.0015
GLU 6700.0016
LEU 6710.0025
SER 6720.0029
SER 6730.0028
HIS 6740.0021
TYR 6750.0018
LEU 6760.0029
CYS 6770.0032
ASN 6780.0034
THR 6790.0042
PRO 6800.0054
PRO 6810.0070
HIS 6820.0075
TYR 6830.0058
HIS 6840.0054
GLY 6850.0051
PHE 6860.0045
PRO 6870.0035
VAL 6880.0022
ARG 6890.0025
LEU 6900.0033
PHE 6910.0033
ASP 6920.0036
THR 6930.0025
SER 6940.0033
SER 6950.0042
CYS 6960.0033
GLU 10.0206
ALA 20.0191
ALA 30.0076
ALA 40.0051
LYS 50.0123
MET 60.0108
GLN 70.0067
ARG 80.0047
LEU 90.0100
VAL 100.0111
LEU 110.0047
LEU 120.0047
LEU 130.0081
ALA 140.0067
ILE 150.0036
SER 160.0105
LEU 170.0138
LEU 180.0062
LEU 190.0115
TYR 200.0183
GLN 210.0153
ASP 220.0133
LEU 230.0240
PRO 240.0238
VAL 250.0283
ARG 260.0185
SER 270.0119
GLU 280.0070
PHE 290.0082
GLU 300.0170
LEU 310.0149
ASP 320.0095
ARG 330.0106
ILE 340.0118
CYS 350.0085
GLY 360.0261
TYR 370.0336
GLY 380.0134
THR 390.0220
ALA 400.0059
ARG 410.0047
CYS 420.0042
ARG 430.0045
LYS 440.0045
LYS 450.0053
CYS 460.0058
ARG 470.0069
SER 480.0077
GLN 490.0045
GLU 500.0031
TYR 510.0048
ARG 520.0044
ILE 530.0040
GLY 540.0036
ARG 550.0031
CYS 560.0045
PRO 570.0055
ASN 580.0042
THR 590.0043
TYR 600.0037
ALA 610.0041
CYS 620.0021
CYS 630.0013
LEU 640.0025
ARG 650.0030
LYS 660.0091
TRP 670.0170
ASP 680.0112
GLU 690.0083
SER 700.0127
LEU 710.0183
LEU 720.0153
ASN 730.0087
ARG 740.0130
THR 750.0149
LYS 760.0105
PRO 770.0100
GLU 780.0048
ALA 790.0115
ALA 800.0139
ALA 810.0247
LYS 820.0205
LYS 830.0167
GLU 840.0114
MET 850.0090
ASN 860.0057
LEU 870.0059
SER 880.0058
VAL 890.0076
GLY 900.0085
LEU 910.0132
GLY 920.0351
GLY 930.0548
GLY 940.0508
SER 950.0303
ASN 960.0071
LEU 970.0072
SER 980.0062
VAL 990.0064
GLY 1000.0081
LEU 1010.0082
GLY 1020.0116
GLU 1030.0175
ILE 1040.0240
GLY 1050.0305
GLY 1060.0196
GLY 1070.0175
SER 1080.0171
LYS 1090.0136
LEU 1100.0142
LEU 1110.0138
ASP 1120.0213
ILE 1130.0181
ASN 1140.0286
LEU 1150.0254
GLY 1160.0278
ARG 1170.0147
GLY 1180.0227
GLY 1190.0157
GLY 1200.0106
SER 1210.0014
MET 1220.0014
VAL 1230.0020
ASP 1240.0025
LEU 1250.0037
THR 1260.0030
PHE 1270.0033
GLY 1280.0045
GLY 1290.0049
VAL 1300.0065
GLY 1310.0048
GLY 1320.0051
GLY 1330.0054
SER 1340.0064
THR 1350.0069
PHE 1360.0088
THR 1370.0095
PHE 1380.0092
PHE 1390.0100
PRO 1400.0097
LEU 1410.0093
VAL 1420.0119
ILE 1430.0279
GLY 1440.0396
GLY 1450.0561
GLY 1460.0280
SER 1470.0267
ASP 1480.0282
ALA 1490.0244
MET 1500.0229
TYR 1510.0103
LEU 1520.0102
GLY 1530.0092
PHE 1540.0102
ALA 1550.0103
ALA 1560.0074
GLY 1570.0066
GLY 1580.0054
GLY 1590.0038
SER 1600.0021
ALA 1610.0032
GLY 1620.0043
GLY 1630.0053
GLU 1640.0060
ASN 1650.0061
HIS 1660.0060
VAL 1670.0066
ALA 1680.0053
PHE 1690.0068
GLY 1700.0068
PRO 1710.0146
GLY 1720.0161
PRO 1730.0184
GLY 1740.0139
VAL 1750.0117
ASP 1760.0064
LEU 1770.0076
THR 1780.0063
PHE 1790.0103
GLY 1800.0125
GLY 1810.0142
VAL 1820.0132
GLN 1830.0070
PHE 1840.0101
ALA 1850.0094
MET 1860.0130
VAL 1870.0065
ASN 1880.0038
ASN 1890.0060
GLY 1900.0060
PRO 1910.0239
GLY 1920.0207
PRO 1930.0201
GLY 1940.0228
GLU 1950.0160
SER 1960.0214
PHE 1970.0421
THR 1980.0283
ALA 1990.0336
GLN 2000.0286
PRO 2010.0369
ALA 2020.0390
ASP 2030.0419
MET 2040.0236
GLN 2050.0263
ALA 2060.0738
GLY 2070.0580
ILE 2080.0428
LYS 2090.0208
GLY 2100.0426
PRO 2110.0392
GLY 2120.0298
PRO 2130.0126
GLY 2140.0200
GLY 2150.0192
SER 2160.0216
ILE 2170.0168
GLN 2180.0258
VAL 2190.0241
ILE 2200.0293
ASN 2210.0527
GLY 2220.0510
SER 2230.0452
THR 2240.0331
ILE 2250.0343
GLY 2260.0201
THR 2270.0162
GLY 2280.0162
SER 2290.0159
LYS 2300.0184
LYS 2310.0260
THR 2320.0261
ILE 2330.0146
LEU 2340.0125
ILE 2350.0103
TYR 2360.0075
SER 2370.0091
ILE 2380.0100
ILE 2390.0114
GLY 2400.0124
VAL 2410.0141
LYS 2420.0079
LYS 2430.0078
GLY 2440.0116
THR 2450.0078
LEU 2460.0060
ALA 2470.0050
TRP 2480.0083
ALA 2490.0088
ARG 2500.0122
THR 2510.0291
GLY 2520.0301
PHE 2530.0301
SER 2540.0330
PRO 2550.0302
ALA 2560.0419
LYS 2570.0374
LYS 2580.0267
LEU 2590.0139
ASN 2600.0167
ALA 2610.0164
GLY 2620.0203
VAL 2630.0235
VAL 2640.0239
ARG 2650.0329
VAL 2660.0132
PHE 2670.0137
PHE 2680.0053
LEU 2690.0047
ASN 2700.0111
GLN 2710.0135
LYS 2720.0133
LYS 2730.0123
ALA 2740.0098
LYS 2750.0115
ASP 2760.0110
VAL 2770.0101
LEU 2780.0094
ARG 2790.0114
LYS 2800.0117
THR 2810.0207
SER 2820.0239
ARG 2830.0096
PRO 2840.0105
MET 2850.0187
VAL 2860.0222
ASP 2870.0219
LEU 2880.0125
THR 2890.0116
PHE 2900.0132
GLY 2910.0176
GLY 2920.0188

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.