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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 94  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0613
THR 260.0113
LYS 270.0113
CYS 280.0108
THR 290.0097
VAL 300.0097
SER 310.0092
HIS 320.0089
GLU 330.0086
VAL 340.0096
ALA 350.0097
ASP 360.0103
CYS 370.0098
SER 380.0106
HIS 390.0114
LEU 400.0109
LYS 410.0154
LEU 420.0127
THR 430.0123
GLN 440.0103
VAL 450.0073
PRO 460.0063
ASP 470.0051
ASP 480.0058
LEU 490.0046
PRO 500.0035
THR 510.0023
ASN 520.0045
ILE 530.0057
THR 540.0073
VAL 550.0083
LEU 560.0066
ASN 570.0089
LEU 580.0088
THR 590.0111
HIS 600.0131
ASN 610.0133
GLN 620.0137
LEU 630.0100
ARG 640.0099
ARG 650.0073
LEU 660.0061
PRO 670.0078
ALA 680.0072
ALA 690.0090
ASN 700.0071
PHE 710.0038
THR 720.0060
ARG 730.0040
TYR 740.0022
SER 750.0053
GLN 760.0057
LEU 770.0051
THR 780.0075
SER 790.0072
LEU 800.0055
ASP 810.0071
VAL 820.0066
GLY 830.0089
PHE 840.0111
ASN 850.0102
THR 860.0095
ILE 870.0070
SER 880.0062
LYS 890.0055
LEU 900.0044
GLU 910.0054
PRO 920.0058
GLU 930.0073
LEU 940.0052
CYS 950.0057
GLN 960.0079
LYS 970.0064
LEU 980.0051
PRO 990.0080
MET 1000.0083
LEU 1010.0049
LYS 1020.0065
VAL 1030.0062
LEU 1040.0049
ASN 1050.0058
LEU 1060.0046
GLN 1070.0063
HIS 1080.0073
ASN 1090.0064
GLU 1100.0059
LEU 1110.0044
SER 1120.0039
GLN 1130.0049
LEU 1140.0051
SER 1150.0066
ASP 1160.0063
LYS 1170.0063
THR 1180.0053
PHE 1190.0055
ALA 1200.0065
PHE 1210.0057
CYS 1220.0051
THR 1230.0057
ASN 1240.0055
LEU 1250.0053
THR 1260.0044
GLU 1270.0040
LEU 1280.0037
HIS 1290.0037
LEU 1300.0037
MET 1310.0037
SER 1320.0035
ASN 1330.0036
SER 1340.0032
ILE 1350.0034
GLN 1360.0052
LYS 1370.0061
ILE 1380.0058
LYS 1390.0073
ASN 1400.0078
ASN 1410.0064
PRO 1420.0060
PHE 1430.0057
VAL 1440.0061
LYS 1450.0060
GLN 1460.0047
LYS 1470.0043
ASN 1480.0039
LEU 1490.0037
ILE 1500.0031
THR 1510.0015
LEU 1520.0015
ASP 1530.0008
LEU 1540.0013
SER 1550.0014
HIS 1560.0012
ASN 1570.0018
GLY 1580.0035
LEU 1590.0035
SER 1600.0050
SER 1610.0055
THR 1620.0045
LYS 1630.0049
LEU 1640.0047
GLY 1650.0057
THR 1660.0069
GLN 1670.0063
VAL 1680.0055
GLN 1690.0054
LEU 1700.0050
GLU 1710.0050
ASN 1720.0051
LEU 1730.0040
GLN 1740.0041
GLU 1750.0037
LEU 1760.0026
LEU 1770.0027
LEU 1780.0022
SER 1790.0032
ASN 1800.0039
ASN 1810.0035
LYS 1820.0046
ILE 1830.0041
GLN 1840.0054
ALA 1850.0047
LEU 1860.0049
LYS 1870.0049
SER 1880.0044
GLU 1890.0053
GLU 1900.0046
LEU 1910.0048
ASP 1920.0049
ILE 1930.0051
PHE 1940.0048
ALA 1950.0052
ASN 1960.0061
SER 1970.0056
SER 1980.0063
LEU 1990.0059
LYS 2000.0071
LYS 2010.0065
LEU 2020.0054
GLU 2030.0057
LEU 2040.0050
SER 2050.0060
SER 2060.0062
ASN 2070.0053
GLN 2080.0058
ILE 2090.0051
LYS 2100.0056
GLU 2110.0047
PHE 2120.0042
SER 2130.0043
PRO 2140.0046
GLY 2150.0048
CYS 2160.0046
PHE 2170.0048
HIS 2180.0048
ALA 2190.0050
ILE 2200.0054
GLY 2210.0059
ARG 2220.0063
LEU 2230.0062
PHE 2240.0073
GLY 2250.0074
LEU 2260.0063
PHE 2270.0070
LEU 2280.0066
ASN 2290.0079
ASN 2300.0084
VAL 2310.0072
GLN 2320.0067
LEU 2330.0059
GLY 2340.0051
PRO 2350.0041
SER 2360.0044
LEU 2370.0044
THR 2380.0046
GLU 2390.0038
LYS 2400.0035
LEU 2410.0048
CYS 2420.0047
LEU 2430.0040
GLU 2440.0044
LEU 2450.0051
ALA 2460.0052
ASN 2470.0055
THR 2480.0060
SER 2490.0065
ILE 2500.0065
ARG 2510.0059
ASN 2520.0064
LEU 2530.0058
SER 2540.0066
LEU 2550.0064
SER 2560.0061
ASN 2570.0066
SER 2580.0066
GLN 2590.0065
LEU 2600.0054
SER 2610.0057
THR 2620.0050
THR 2630.0041
SER 2640.0039
ASN 2650.0031
THR 2660.0026
THR 2670.0037
PHE 2680.0035
LEU 2690.0028
GLY 2700.0039
LEU 2710.0045
LYS 2720.0041
TRP 2730.0049
THR 2740.0053
ASN 2750.0054
LEU 2760.0038
THR 2770.0044
MET 2780.0048
LEU 2790.0044
ASP 2800.0052
LEU 2810.0051
SER 2820.0049
TYR 2830.0048
ASN 2840.0049
ASN 2850.0048
LEU 2860.0046
ASN 2870.0048
VAL 2880.0052
VAL 2890.0048
GLY 2900.0055
ASN 2910.0047
ASP 2920.0035
SER 2930.0035
PHE 2940.0020
ALA 2950.0016
TRP 2960.0021
LEU 2970.0027
PRO 2980.0026
GLN 2990.0035
LEU 3000.0034
GLU 3010.0028
TYR 3020.0031
PHE 3030.0024
PHE 3040.0036
LEU 3050.0039
GLU 3060.0046
TYR 3070.0043
ASN 3080.0044
ASN 3090.0041
ILE 3100.0043
GLN 3110.0046
HIS 3120.0049
LEU 3130.0047
PHE 3140.0056
SER 3150.0058
HIS 3160.0049
SER 3170.0041
LEU 3180.0028
HIS 3190.0033
GLY 3200.0028
LEU 3210.0026
PHE 3220.0033
ASN 3230.0035
VAL 3240.0032
ARG 3250.0041
TYR 3260.0026
LEU 3270.0019
ASN 3280.0026
LEU 3290.0030
LYS 3300.0036
ARG 3310.0033
SER 3320.0040
PHE 3330.0033
THR 3340.0020
LYS 3350.0020
GLN 3360.0041
SER 3370.0061
ILE 3380.0101
SER 3390.0113
LEU 3400.0074
ALA 3410.0050
SER 3420.0029
LEU 3430.0036
PRO 3440.0039
LYS 3450.0062
ILE 3460.0047
ASP 3470.0054
ASP 3480.0058
PHE 3490.0057
SER 3500.0047
PHE 3510.0041
GLN 3520.0050
TRP 3530.0044
LEU 3540.0041
LYS 3550.0052
CYS 3560.0050
LEU 3570.0045
GLU 3580.0051
HIS 3590.0047
LEU 3600.0038
ASN 3610.0035
MET 3620.0034
GLU 3630.0035
ASP 3640.0037
ASN 3650.0037
ASP 3660.0037
ILE 3670.0040
PRO 3680.0044
GLY 3690.0045
ILE 3700.0046
LYS 3710.0051
SER 3720.0057
ASN 3730.0055
MET 3740.0048
PHE 3750.0048
THR 3760.0054
GLY 3770.0054
LEU 3780.0052
ILE 3790.0059
ASN 3800.0059
LEU 3810.0050
LYS 3820.0054
TYR 3830.0050
LEU 3840.0041
SER 3850.0040
LEU 3860.0037
SER 3870.0037
ASN 3880.0038
SER 3890.0039
PHE 3900.0040
THR 3910.0048
SER 3920.0045
LEU 3930.0040
ARG 3940.0041
THR 3950.0040
LEU 3960.0037
THR 3970.0035
ASN 3980.0035
GLU 3990.0036
THR 4000.0038
PHE 4010.0041
VAL 4020.0042
SER 4030.0042
LEU 4040.0044
ALA 4050.0046
HIS 4060.0047
SER 4070.0044
PRO 4080.0047
LEU 4090.0044
HIS 4100.0045
ILE 4110.0036
LEU 4120.0031
ASN 4130.0030
LEU 4140.0027
THR 4150.0028
LYS 4160.0033
ASN 4170.0036
LYS 4180.0038
ILE 4190.0034
SER 4200.0038
LYS 4210.0038
ILE 4220.0032
GLU 4230.0030
SER 4240.0026
ASP 4250.0020
ALA 4260.0029
PHE 4270.0028
SER 4280.0027
TRP 4290.0027
LEU 4300.0028
GLY 4310.0020
HIS 4320.0021
LEU 4330.0020
GLU 4340.0020
VAL 4350.0022
LEU 4360.0015
ASP 4370.0015
LEU 4380.0018
GLY 4390.0017
LEU 4400.0017
ASN 4410.0026
GLU 4420.0032
ILE 4430.0028
GLY 4440.0034
GLN 4450.0031
GLU 4460.0019
LEU 4470.0020
THR 4480.0018
GLY 4490.0020
GLN 4500.0019
GLU 4510.0021
TRP 4520.0020
ARG 4530.0017
GLY 4540.0015
LEU 4550.0016
GLU 4560.0015
ASN 4570.0015
ILE 4580.0017
PHE 4590.0020
GLU 4600.0021
ILE 4610.0021
TYR 4620.0022
LEU 4630.0020
SER 4640.0024
TYR 4650.0026
ASN 4660.0025
LYS 4670.0031
TYR 4680.0029
LEU 4690.0023
GLN 4700.0023
LEU 4710.0023
THR 4720.0021
ARG 4730.0024
ASN 4740.0024
SER 4750.0024
PHE 4760.0025
ALA 4770.0025
LEU 4780.0025
VAL 4790.0028
PRO 4800.0031
SER 4810.0028
LEU 4820.0026
GLN 4830.0031
ARG 4840.0031
LEU 4850.0026
MET 4860.0035
LEU 4870.0033
ARG 4880.0040
ARG 4890.0041
VAL 4900.0034
ALA 4910.0037
LEU 4920.0032
LYS 4930.0027
ASN 4940.0024
VAL 4950.0034
ASP 4960.0030
SER 4970.0027
SER 4980.0025
PRO 4990.0029
SER 5000.0033
PRO 5010.0023
PHE 5020.0027
GLN 5030.0028
PRO 5040.0029
LEU 5050.0032
ARG 5060.0030
ASN 5070.0035
LEU 5080.0021
THR 5090.0035
ILE 5100.0035
LEU 5110.0038
ASP 5120.0044
LEU 5130.0041
SER 5140.0050
ASN 5150.0056
ASN 5160.0060
ASN 5170.0056
ILE 5180.0051
ALA 5190.0048
ASN 5200.0048
ILE 5210.0045
ASN 5220.0039
ASP 5230.0035
ASP 5240.0034
MET 5250.0039
LEU 5260.0027
GLU 5270.0025
GLY 5280.0027
LEU 5290.0030
GLU 5300.0032
LYS 5310.0039
LEU 5320.0034
GLU 5330.0043
ILE 5340.0042
LEU 5350.0039
ASP 5360.0050
LEU 5370.0048
GLN 5380.0053
HIS 5390.0059
ASN 5400.0057
ASN 5410.0069
LEU 5420.0061
ALA 5430.0056
ARG 5440.0069
LEU 5450.0066
TRP 5460.0065
LYS 5470.0082
HIS 5480.0104
ALA 5490.0123
ASN 5500.0121
PRO 5510.0168
GLY 5520.0163
GLY 5530.0127
PRO 5540.0082
ILE 5550.0067
TYR 5560.0047
PHE 5570.0046
LEU 5580.0036
LYS 5590.0034
GLY 5600.0031
LEU 5610.0033
SER 5620.0035
HIS 5630.0032
LEU 5640.0031
HIS 5650.0032
ILE 5660.0038
LEU 5670.0035
ASN 5680.0039
LEU 5690.0036
GLU 5700.0040
SER 5710.0046
ASN 5720.0047
GLY 5730.0042
PHE 5740.0035
ASP 5750.0039
GLU 5760.0051
ILE 5770.0043
PRO 5780.0053
VAL 5790.0050
GLU 5800.0043
VAL 5810.0037
PHE 5820.0030
LYS 5830.0033
ASP 5840.0029
LEU 5850.0024
PHE 5860.0026
GLU 5870.0021
LEU 5880.0020
LYS 5890.0021
ILE 5900.0022
ILE 5910.0023
ASP 5920.0024
LEU 5930.0020
GLY 5940.0023
LEU 5950.0023
ASN 5960.0016
ASN 5970.0015
LEU 5980.0014
ASN 5990.0020
THR 6000.0028
LEU 6010.0042
PRO 6020.0048
ALA 6030.0050
SER 6040.0041
VAL 6050.0032
PHE 6060.0030
ASN 6070.0034
ASN 6080.0026
GLN 6090.0020
VAL 6100.0022
SER 6110.0020
LEU 6120.0022
LYS 6130.0027
SER 6140.0026
LEU 6150.0024
ASN 6160.0025
LEU 6170.0022
GLN 6180.0021
LYS 6190.0017
ASN 6200.0016
LEU 6210.0016
ILE 6220.0024
THR 6230.0025
SER 6240.0035
VAL 6250.0039
GLU 6260.0039
LYS 6270.0044
LYS 6280.0047
VAL 6290.0041
PHE 6300.0038
GLY 6310.0043
PRO 6320.0039
ALA 6330.0032
PHE 6340.0037
ARG 6350.0042
ASN 6360.0038
LEU 6370.0034
THR 6380.0035
GLU 6390.0030
LEU 6400.0028
ASP 6410.0029
MET 6420.0027
ARG 6430.0023
PHE 6440.0021
ASN 6450.0024
PRO 6460.0036
PHE 6470.0033
ASP 6480.0047
CYS 6490.0044
THR 6500.0056
CYS 6510.0041
GLU 6520.0053
SER 6530.0047
ILE 6540.0027
ALA 6550.0019
TRP 6560.0024
PHE 6570.0025
VAL 6580.0023
ASN 6590.0023
TRP 6600.0025
ILE 6610.0037
ASN 6620.0046
GLU 6630.0029
THR 6640.0053
HIS 6650.0091
THR 6660.0021
ASN 6670.0022
ILE 6680.0020
PRO 6690.0022
GLU 6700.0019
LEU 6710.0011
SER 6720.0010
SER 6730.0008
HIS 6740.0009
TYR 6750.0013
LEU 6760.0023
CYS 6770.0046
ASN 6780.0066
THR 6790.0087
PRO 6800.0100
PRO 6810.0127
HIS 6820.0124
TYR 6830.0088
HIS 6840.0086
GLY 6850.0061
PHE 6860.0056
PRO 6870.0034
VAL 6880.0026
ARG 6890.0017
LEU 6900.0038
PHE 6910.0039
ASP 6920.0050
THR 6930.0033
SER 6940.0049
SER 6950.0067
CYS 6960.0053
GLU 10.0170
ALA 20.0190
ALA 30.0108
ALA 40.0034
LYS 50.0127
MET 60.0128
GLN 70.0084
ARG 80.0054
LEU 90.0119
VAL 100.0132
LEU 110.0059
LEU 120.0060
LEU 130.0109
ALA 140.0093
ILE 150.0052
SER 160.0155
LEU 170.0211
LEU 180.0098
LEU 190.0176
TYR 200.0282
GLN 210.0238
ASP 220.0197
LEU 230.0361
PRO 240.0359
VAL 250.0433
ARG 260.0295
SER 270.0198
GLU 280.0112
PHE 290.0153
GLU 300.0302
LEU 310.0259
ASP 320.0158
ARG 330.0186
ILE 340.0208
CYS 350.0145
GLY 360.0497
TYR 370.0613
GLY 380.0255
THR 390.0404
ALA 400.0086
ARG 410.0074
CYS 420.0040
ARG 430.0050
LYS 440.0059
LYS 450.0097
CYS 460.0129
ARG 470.0184
SER 480.0218
GLN 490.0188
GLU 500.0115
TYR 510.0070
ARG 520.0066
ILE 530.0049
GLY 540.0066
ARG 550.0072
CYS 560.0084
PRO 570.0108
ASN 580.0081
THR 590.0105
TYR 600.0073
ALA 610.0080
CYS 620.0026
CYS 630.0052
LEU 640.0059
ARG 650.0105
LYS 660.0144
TRP 670.0198
ASP 680.0192
GLU 690.0096
SER 700.0193
LEU 710.0234
LEU 720.0207
ASN 730.0111
ARG 740.0140
THR 750.0204
LYS 760.0170
PRO 770.0170
GLU 780.0155
ALA 790.0164
ALA 800.0180
ALA 810.0106
LYS 820.0128
LYS 830.0102
GLU 840.0111
MET 850.0097
ASN 860.0075
LEU 870.0051
SER 880.0027
VAL 890.0043
GLY 900.0061
LEU 910.0103
GLY 920.0169
GLY 930.0201
GLY 940.0150
SER 950.0119
ASN 960.0083
LEU 970.0069
SER 980.0048
VAL 990.0031
GLY 1000.0077
LEU 1010.0085
GLY 1020.0092
GLU 1030.0124
ILE 1040.0099
GLY 1050.0142
GLY 1060.0210
GLY 1070.0185
SER 1080.0184
LYS 1090.0131
LEU 1100.0135
LEU 1110.0164
ASP 1120.0210
ILE 1130.0172
ASN 1140.0271
LEU 1150.0252
GLY 1160.0275
ARG 1170.0162
GLY 1180.0255
GLY 1190.0136
GLY 1200.0017
SER 1210.0073
MET 1220.0069
VAL 1230.0056
ASP 1240.0053
LEU 1250.0047
THR 1260.0065
PHE 1270.0077
GLY 1280.0102
GLY 1290.0133
VAL 1300.0149
GLY 1310.0132
GLY 1320.0119
GLY 1330.0091
SER 1340.0089
THR 1350.0063
PHE 1360.0049
THR 1370.0052
PHE 1380.0030
PHE 1390.0054
PRO 1400.0058
LEU 1410.0069
VAL 1420.0081
ILE 1430.0266
GLY 1440.0403
GLY 1450.0592
GLY 1460.0284
SER 1470.0211
ASP 1480.0226
ALA 1490.0152
MET 1500.0166
TYR 1510.0059
LEU 1520.0050
GLY 1530.0047
PHE 1540.0046
ALA 1550.0052
ALA 1560.0084
GLY 1570.0070
GLY 1580.0067
GLY 1590.0054
SER 1600.0056
ALA 1610.0080
GLY 1620.0099
GLY 1630.0094
GLU 1640.0093
ASN 1650.0060
HIS 1660.0056
VAL 1670.0037
ALA 1680.0038
PHE 1690.0031
GLY 1700.0047
PRO 1710.0043
GLY 1720.0043
PRO 1730.0074
GLY 1740.0040
VAL 1750.0019
ASP 1760.0031
LEU 1770.0013
THR 1780.0019
PHE 1790.0017
GLY 1800.0031
GLY 1810.0066
VAL 1820.0071
GLN 1830.0084
PHE 1840.0099
ALA 1850.0128
MET 1860.0113
VAL 1870.0148
ASN 1880.0104
ASN 1890.0067
GLY 1900.0154
PRO 1910.0112
GLY 1920.0088
PRO 1930.0076
GLY 1940.0104
GLU 1950.0029
SER 1960.0076
PHE 1970.0095
THR 1980.0134
ALA 1990.0088
GLN 2000.0069
PRO 2010.0140
ALA 2020.0151
ASP 2030.0121
MET 2040.0095
GLN 2050.0175
ALA 2060.0439
GLY 2070.0191
ILE 2080.0276
LYS 2090.0261
GLY 2100.0529
PRO 2110.0308
GLY 2120.0260
PRO 2130.0157
GLY 2140.0255
GLY 2150.0215
SER 2160.0353
ILE 2170.0250
GLN 2180.0207
VAL 2190.0273
ILE 2200.0343
ASN 2210.0550
GLY 2220.0536
SER 2230.0400
THR 2240.0198
ILE 2250.0261
GLY 2260.0252
THR 2270.0166
GLY 2280.0113
SER 2290.0133
LYS 2300.0185
LYS 2310.0214
THR 2320.0253
ILE 2330.0126
LEU 2340.0119
ILE 2350.0118
TYR 2360.0055
SER 2370.0062
ILE 2380.0065
ILE 2390.0075
GLY 2400.0078
VAL 2410.0087
LYS 2420.0070
LYS 2430.0058
GLY 2440.0055
THR 2450.0054
LEU 2460.0040
ALA 2470.0025
TRP 2480.0049
ALA 2490.0050
ARG 2500.0074
THR 2510.0269
GLY 2520.0275
PHE 2530.0282
SER 2540.0304
PRO 2550.0278
ALA 2560.0321
LYS 2570.0271
LYS 2580.0183
LEU 2590.0064
ASN 2600.0130
ALA 2610.0132
GLY 2620.0183
VAL 2630.0230
VAL 2640.0250
ARG 2650.0332
VAL 2660.0167
PHE 2670.0167
PHE 2680.0057
LEU 2690.0084
ASN 2700.0087
GLN 2710.0113
LYS 2720.0158
LYS 2730.0174
ALA 2740.0133
LYS 2750.0115
ASP 2760.0122
VAL 2770.0140
LEU 2780.0110
ARG 2790.0084
LYS 2800.0114
THR 2810.0203
SER 2820.0249
ARG 2830.0103
PRO 2840.0131
MET 2850.0199
VAL 2860.0210
ASP 2870.0224
LEU 2880.0152
THR 2890.0146
PHE 2900.0129
GLY 2910.0202
GLY 2920.0200

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.