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***  TLR_3_simulation  ***

<R2> analysis for 2608260340483950756

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0712
THR 260.0015
LYS 270.0012
CYS 280.0018
THR 290.0027
VAL 300.0032
SER 310.0052
HIS 320.0066
GLU 330.0045
VAL 340.0050
ALA 350.0032
ASP 360.0045
CYS 370.0046
SER 380.0060
HIS 390.0067
LEU 400.0059
LYS 410.0105
LEU 420.0091
THR 430.0088
GLN 440.0078
VAL 450.0064
PRO 460.0057
ASP 470.0049
ASP 480.0046
LEU 490.0039
PRO 500.0027
THR 510.0024
ASN 520.0029
ILE 530.0036
THR 540.0042
VAL 550.0050
LEU 560.0051
ASN 570.0064
LEU 580.0068
THR 590.0083
HIS 600.0094
ASN 610.0098
GLN 620.0098
LEU 630.0074
ARG 640.0069
ARG 650.0051
LEU 660.0044
PRO 670.0050
ALA 680.0042
ALA 690.0058
ASN 700.0054
PHE 710.0033
THR 720.0036
ARG 730.0033
TYR 740.0024
SER 750.0021
GLN 760.0028
LEU 770.0031
THR 780.0043
SER 790.0048
LEU 800.0042
ASP 810.0057
VAL 820.0057
GLY 830.0071
PHE 840.0082
ASN 850.0075
THR 860.0063
ILE 870.0041
SER 880.0027
LYS 890.0021
LEU 900.0013
GLU 910.0023
PRO 920.0035
GLU 930.0039
LEU 940.0016
CYS 950.0031
GLN 960.0045
LYS 970.0033
LEU 980.0025
PRO 990.0044
MET 1000.0047
LEU 1010.0045
LYS 1020.0061
VAL 1030.0058
LEU 1040.0045
ASN 1050.0046
LEU 1060.0038
GLN 1070.0049
HIS 1080.0049
ASN 1090.0035
GLU 1100.0026
LEU 1110.0036
SER 1120.0036
GLN 1130.0037
LEU 1140.0042
SER 1150.0044
ASP 1160.0049
LYS 1170.0046
THR 1180.0042
PHE 1190.0050
ALA 1200.0055
PHE 1210.0056
CYS 1220.0055
THR 1230.0068
ASN 1240.0069
LEU 1250.0063
THR 1260.0068
GLU 1270.0063
LEU 1280.0057
HIS 1290.0054
LEU 1300.0049
MET 1310.0050
SER 1320.0047
ASN 1330.0046
SER 1340.0045
ILE 1350.0047
GLN 1360.0055
LYS 1370.0054
ILE 1380.0052
LYS 1390.0053
ASN 1400.0053
ASN 1410.0052
PRO 1420.0057
PHE 1430.0053
VAL 1440.0051
LYS 1450.0058
GLN 1460.0059
LYS 1470.0055
ASN 1480.0058
LEU 1490.0057
ILE 1500.0055
THR 1510.0052
LEU 1520.0052
ASP 1530.0053
LEU 1540.0052
SER 1550.0051
HIS 1560.0053
ASN 1570.0054
GLY 1580.0054
LEU 1590.0048
SER 1600.0044
SER 1610.0033
THR 1620.0024
LYS 1630.0032
LEU 1640.0040
GLY 1650.0044
THR 1660.0042
GLN 1670.0043
VAL 1680.0032
GLN 1690.0026
LEU 1700.0024
GLU 1710.0016
ASN 1720.0025
LEU 1730.0029
GLN 1740.0037
GLU 1750.0044
LEU 1760.0028
LEU 1770.0038
LEU 1780.0033
SER 1790.0042
ASN 1800.0049
ASN 1810.0046
LYS 1820.0040
ILE 1830.0024
GLN 1840.0019
ALA 1850.0024
LEU 1860.0025
LYS 1870.0043
SER 1880.0054
GLU 1890.0057
GLU 1900.0035
LEU 1910.0025
ASP 1920.0043
ILE 1930.0028
PHE 1940.0022
ALA 1950.0045
ASN 1960.0044
SER 1970.0037
SER 1980.0054
LEU 1990.0053
LYS 2000.0072
LYS 2010.0064
LEU 2020.0049
GLU 2030.0050
LEU 2040.0038
SER 2050.0047
SER 2060.0044
ASN 2070.0032
GLN 2080.0028
ILE 2090.0024
LYS 2100.0025
GLU 2110.0034
PHE 2120.0046
SER 2130.0055
PRO 2140.0073
GLY 2150.0077
CYS 2160.0056
PHE 2170.0062
HIS 2180.0073
ALA 2190.0060
ILE 2200.0058
GLY 2210.0072
ARG 2220.0081
LEU 2230.0078
PHE 2240.0092
GLY 2250.0086
LEU 2260.0068
PHE 2270.0064
LEU 2280.0052
ASN 2290.0057
ASN 2300.0051
VAL 2310.0043
GLN 2320.0040
LEU 2330.0039
GLY 2340.0038
PRO 2350.0039
SER 2360.0039
LEU 2370.0041
THR 2380.0050
GLU 2390.0051
LYS 2400.0050
LEU 2410.0060
CYS 2420.0070
LEU 2430.0070
GLU 2440.0069
LEU 2450.0078
ALA 2460.0082
ASN 2470.0090
THR 2480.0088
SER 2490.0095
ILE 2500.0090
ARG 2510.0086
ASN 2520.0079
LEU 2530.0065
SER 2540.0061
LEU 2550.0049
SER 2560.0040
ASN 2570.0041
SER 2580.0039
GLN 2590.0036
LEU 2600.0030
SER 2610.0034
THR 2620.0034
THR 2630.0035
SER 2640.0032
ASN 2650.0033
THR 2660.0032
THR 2670.0039
PHE 2680.0048
LEU 2690.0045
GLY 2700.0052
LEU 2710.0062
LYS 2720.0062
TRP 2730.0067
THR 2740.0071
ASN 2750.0075
LEU 2760.0049
THR 2770.0054
MET 2780.0053
LEU 2790.0045
ASP 2800.0046
LEU 2810.0024
SER 2820.0025
TYR 2830.0026
ASN 2840.0024
ASN 2850.0024
LEU 2860.0031
ASN 2870.0030
VAL 2880.0034
VAL 2890.0037
GLY 2900.0040
ASN 2910.0037
ASP 2920.0034
SER 2930.0038
PHE 2940.0039
ALA 2950.0034
TRP 2960.0035
LEU 2970.0037
PRO 2980.0033
GLN 2990.0037
LEU 3000.0039
GLU 3010.0026
TYR 3020.0030
PHE 3030.0029
PHE 3040.0034
LEU 3050.0034
GLU 3060.0034
TYR 3070.0029
ASN 3080.0029
ASN 3090.0026
ILE 3100.0030
GLN 3110.0032
HIS 3120.0035
LEU 3130.0036
PHE 3140.0041
SER 3150.0042
HIS 3160.0037
SER 3170.0040
LEU 3180.0037
HIS 3190.0035
GLY 3200.0033
LEU 3210.0028
PHE 3220.0023
ASN 3230.0023
VAL 3240.0024
ARG 3250.0020
TYR 3260.0022
LEU 3270.0024
ASN 3280.0026
LEU 3290.0027
LYS 3300.0027
ARG 3310.0025
SER 3320.0026
PHE 3330.0026
THR 3340.0025
LYS 3350.0031
GLN 3360.0043
SER 3370.0057
ILE 3380.0082
SER 3390.0091
LEU 3400.0066
ALA 3410.0046
SER 3420.0029
LEU 3430.0028
PRO 3440.0027
LYS 3450.0046
ILE 3460.0030
ASP 3470.0032
ASP 3480.0027
PHE 3490.0023
SER 3500.0027
PHE 3510.0021
GLN 3520.0021
TRP 3530.0025
LEU 3540.0023
LYS 3550.0021
CYS 3560.0018
LEU 3570.0017
GLU 3580.0016
HIS 3590.0016
LEU 3600.0014
ASN 3610.0016
MET 3620.0014
GLU 3630.0016
ASP 3640.0017
ASN 3650.0015
ASP 3660.0013
ILE 3670.0011
PRO 3680.0003
GLY 3690.0009
ILE 3700.0013
LYS 3710.0021
SER 3720.0023
ASN 3730.0016
MET 3740.0013
PHE 3750.0013
THR 3760.0018
GLY 3770.0016
LEU 3780.0017
ILE 3790.0020
ASN 3800.0023
LEU 3810.0021
LYS 3820.0027
TYR 3830.0026
LEU 3840.0022
SER 3850.0022
LEU 3860.0023
SER 3870.0025
ASN 3880.0024
SER 3890.0022
PHE 3900.0020
THR 3910.0023
SER 3920.0027
LEU 3930.0035
ARG 3940.0038
THR 3950.0046
LEU 3960.0048
THR 3970.0051
ASN 3980.0052
GLU 3990.0056
THR 4000.0054
PHE 4010.0044
VAL 4020.0046
SER 4030.0042
LEU 4040.0044
ALA 4050.0048
HIS 4060.0045
SER 4070.0041
PRO 4080.0044
LEU 4090.0041
HIS 4100.0042
ILE 4110.0039
LEU 4120.0039
ASN 4130.0039
LEU 4140.0039
THR 4150.0039
LYS 4160.0040
ASN 4170.0042
LYS 4180.0041
ILE 4190.0042
SER 4200.0043
LYS 4210.0050
ILE 4220.0049
GLU 4230.0053
SER 4240.0052
ASP 4250.0053
ALA 4260.0052
PHE 4270.0050
SER 4280.0052
TRP 4290.0055
LEU 4300.0052
GLY 4310.0054
HIS 4320.0053
LEU 4330.0048
GLU 4340.0043
VAL 4350.0039
LEU 4360.0040
ASP 4370.0040
LEU 4380.0040
GLY 4390.0038
LEU 4400.0040
ASN 4410.0047
GLU 4420.0049
ILE 4430.0046
GLY 4440.0047
GLN 4450.0046
GLU 4460.0055
LEU 4470.0040
THR 4480.0044
GLY 4490.0027
GLN 4500.0037
GLU 4510.0043
TRP 4520.0036
ARG 4530.0039
GLY 4540.0042
LEU 4550.0038
GLU 4560.0038
ASN 4570.0038
ILE 4580.0031
PHE 4590.0025
GLU 4600.0020
ILE 4610.0019
TYR 4620.0022
LEU 4630.0021
SER 4640.0018
TYR 4650.0022
ASN 4660.0034
LYS 4670.0043
TYR 4680.0041
LEU 4690.0032
GLN 4700.0039
LEU 4710.0039
THR 4720.0048
ARG 4730.0051
ASN 4740.0037
SER 4750.0025
PHE 4760.0019
ALA 4770.0025
LEU 4780.0018
VAL 4790.0010
PRO 4800.0018
SER 4810.0012
LEU 4820.0012
GLN 4830.0019
ARG 4840.0019
LEU 4850.0015
MET 4860.0013
LEU 4870.0009
ARG 4880.0010
ARG 4890.0001
VAL 4900.0012
ALA 4910.0024
LEU 4920.0023
LYS 4930.0038
ASN 4940.0046
VAL 4950.0041
ASP 4960.0045
SER 4970.0057
SER 4980.0073
PRO 4990.0072
SER 5000.0053
PRO 5010.0042
PHE 5020.0040
GLN 5030.0052
PRO 5040.0051
LEU 5050.0044
ARG 5060.0052
ASN 5070.0043
LEU 5080.0045
THR 5090.0048
ILE 5100.0048
LEU 5110.0040
ASP 5120.0034
LEU 5130.0032
SER 5140.0028
ASN 5150.0022
ASN 5160.0028
ASN 5170.0024
ILE 5180.0028
ALA 5190.0028
ASN 5200.0032
ILE 5210.0035
ASN 5220.0042
ASP 5230.0043
ASP 5240.0053
MET 5250.0049
LEU 5260.0048
GLU 5270.0057
GLY 5280.0066
LEU 5290.0062
GLU 5300.0069
LYS 5310.0060
LEU 5320.0056
GLU 5330.0056
ILE 5340.0053
LEU 5350.0049
ASP 5360.0038
LEU 5370.0033
GLN 5380.0028
HIS 5390.0027
ASN 5400.0032
ASN 5410.0042
LEU 5420.0036
ALA 5430.0037
ARG 5440.0053
LEU 5450.0046
TRP 5460.0046
LYS 5470.0072
HIS 5480.0091
ALA 5490.0113
ASN 5500.0103
PRO 5510.0140
GLY 5520.0129
GLY 5530.0095
PRO 5540.0053
ILE 5550.0042
TYR 5560.0024
PHE 5570.0038
LEU 5580.0034
LYS 5590.0032
GLY 5600.0047
LEU 5610.0046
SER 5620.0048
HIS 5630.0055
LEU 5640.0052
HIS 5650.0054
ILE 5660.0045
LEU 5670.0031
ASN 5680.0026
LEU 5690.0018
GLU 5700.0014
SER 5710.0018
ASN 5720.0028
GLY 5730.0035
PHE 5740.0033
ASP 5750.0048
GLU 5760.0054
ILE 5770.0039
PRO 5780.0041
VAL 5790.0044
GLU 5800.0025
VAL 5810.0004
PHE 5820.0016
LYS 5830.0019
ASP 5840.0026
LEU 5850.0034
PHE 5860.0041
GLU 5870.0051
LEU 5880.0042
LYS 5890.0049
ILE 5900.0040
ILE 5910.0019
ASP 5920.0013
LEU 5930.0009
GLY 5940.0010
LEU 5950.0019
ASN 5960.0026
ASN 5970.0034
LEU 5980.0036
ASN 5990.0043
THR 6000.0051
LEU 6010.0047
PRO 6020.0054
ALA 6030.0061
SER 6040.0055
VAL 6050.0041
PHE 6060.0035
ASN 6070.0047
ASN 6080.0041
GLN 6090.0043
VAL 6100.0062
SER 6110.0060
LEU 6120.0047
LYS 6130.0051
SER 6140.0037
LEU 6150.0023
ASN 6160.0022
LEU 6170.0021
GLN 6180.0023
LYS 6190.0029
ASN 6200.0029
LEU 6210.0030
ILE 6220.0031
THR 6230.0029
SER 6240.0032
VAL 6250.0035
GLU 6260.0037
LYS 6270.0042
LYS 6280.0046
VAL 6290.0042
PHE 6300.0040
GLY 6310.0043
PRO 6320.0047
ALA 6330.0037
PHE 6340.0036
ARG 6350.0049
ASN 6360.0055
LEU 6370.0041
THR 6380.0044
GLU 6390.0032
LEU 6400.0020
ASP 6410.0029
MET 6420.0026
ARG 6430.0033
PHE 6440.0036
ASN 6450.0030
PRO 6460.0019
PHE 6470.0024
ASP 6480.0022
CYS 6490.0034
THR 6500.0038
CYS 6510.0049
GLU 6520.0032
SER 6530.0021
ILE 6540.0038
ALA 6550.0059
TRP 6560.0034
PHE 6570.0039
VAL 6580.0043
ASN 6590.0039
TRP 6600.0039
ILE 6610.0027
ASN 6620.0022
GLU 6630.0017
THR 6640.0038
HIS 6650.0062
THR 6660.0011
ASN 6670.0014
ILE 6680.0023
PRO 6690.0042
GLU 6700.0055
LEU 6710.0045
SER 6720.0050
SER 6730.0053
HIS 6740.0047
TYR 6750.0038
LEU 6760.0037
CYS 6770.0029
ASN 6780.0016
THR 6790.0021
PRO 6800.0036
PRO 6810.0047
HIS 6820.0057
TYR 6830.0044
HIS 6840.0027
GLY 6850.0027
PHE 6860.0037
PRO 6870.0042
VAL 6880.0040
ARG 6890.0048
LEU 6900.0049
PHE 6910.0037
ASP 6920.0090
THR 6930.0123
SER 6940.0169
SER 6950.0169
CYS 6960.0190
GLU 10.0077
ALA 20.0098
ALA 30.0067
ALA 40.0018
LYS 50.0076
MET 60.0090
GLN 70.0072
ARG 80.0044
LEU 90.0085
VAL 100.0102
LEU 110.0056
LEU 120.0044
LEU 130.0078
ALA 140.0074
ILE 150.0041
SER 160.0094
LEU 170.0134
LEU 180.0061
LEU 190.0084
TYR 200.0155
GLN 210.0112
ASP 220.0075
LEU 230.0186
PRO 240.0171
VAL 250.0221
ARG 260.0156
SER 270.0110
GLU 280.0060
PHE 290.0098
GLU 300.0207
LEU 310.0180
ASP 320.0123
ARG 330.0138
ILE 340.0160
CYS 350.0129
GLY 360.0324
TYR 370.0417
GLY 380.0179
THR 390.0263
ALA 400.0069
ARG 410.0086
CYS 420.0073
ARG 430.0058
LYS 440.0041
LYS 450.0039
CYS 460.0064
ARG 470.0066
SER 480.0078
GLN 490.0080
GLU 500.0076
TYR 510.0078
ARG 520.0064
ILE 530.0086
GLY 540.0081
ARG 550.0074
CYS 560.0088
PRO 570.0100
ASN 580.0075
THR 590.0074
TYR 600.0051
ALA 610.0055
CYS 620.0058
CYS 630.0058
LEU 640.0062
ARG 650.0063
LYS 660.0088
TRP 670.0070
ASP 680.0041
GLU 690.0070
SER 700.0141
LEU 710.0127
LEU 720.0080
ASN 730.0105
ARG 740.0157
THR 750.0135
LYS 760.0103
PRO 770.0090
GLU 780.0112
ALA 790.0122
ALA 800.0120
ALA 810.0195
LYS 820.0173
LYS 830.0140
GLU 840.0090
MET 850.0078
ASN 860.0051
LEU 870.0047
SER 880.0046
VAL 890.0055
GLY 900.0049
LEU 910.0069
GLY 920.0104
GLY 930.0273
GLY 940.0302
SER 950.0242
ASN 960.0090
LEU 970.0093
SER 980.0077
VAL 990.0074
GLY 1000.0064
LEU 1010.0072
GLY 1020.0140
GLU 1030.0169
ILE 1040.0128
GLY 1050.0152
GLY 1060.0248
GLY 1070.0222
SER 1080.0201
LYS 1090.0154
LEU 1100.0144
LEU 1110.0022
ASP 1120.0039
ILE 1130.0058
ASN 1140.0080
LEU 1150.0100
GLY 1160.0197
ARG 1170.0230
GLY 1180.0233
GLY 1190.0245
GLY 1200.0230
SER 1210.0113
MET 1220.0102
VAL 1230.0073
ASP 1240.0072
LEU 1250.0052
THR 1260.0055
PHE 1270.0053
GLY 1280.0057
GLY 1290.0065
VAL 1300.0066
GLY 1310.0054
GLY 1320.0061
GLY 1330.0059
SER 1340.0068
THR 1350.0065
PHE 1360.0053
THR 1370.0025
PHE 1380.0019
PHE 1390.0041
PRO 1400.0047
LEU 1410.0081
VAL 1420.0189
ILE 1430.0181
GLY 1440.0302
GLY 1450.0346
GLY 1460.0037
SER 1470.0040
ASP 1480.0032
ALA 1490.0039
MET 1500.0035
TYR 1510.0053
LEU 1520.0034
GLY 1530.0030
PHE 1540.0025
ALA 1550.0022
ALA 1560.0058
GLY 1570.0061
GLY 1580.0063
GLY 1590.0067
SER 1600.0071
ALA 1610.0140
GLY 1620.0117
GLY 1630.0085
GLU 1640.0080
ASN 1650.0070
HIS 1660.0067
VAL 1670.0064
ALA 1680.0066
PHE 1690.0061
GLY 1700.0069
PRO 1710.0179
GLY 1720.0153
PRO 1730.0097
GLY 1740.0108
VAL 1750.0117
ASP 1760.0125
LEU 1770.0088
THR 1780.0112
PHE 1790.0150
GLY 1800.0214
GLY 1810.0418
VAL 1820.0379
GLN 1830.0268
PHE 1840.0182
ALA 1850.0131
MET 1860.0163
VAL 1870.0209
ASN 1880.0154
ASN 1890.0208
GLY 1900.0159
PRO 1910.0212
GLY 1920.0259
PRO 1930.0208
GLY 1940.0205
GLU 1950.0270
SER 1960.0434
PHE 1970.0422
THR 1980.0115
ALA 1990.0178
GLN 2000.0381
PRO 2010.0369
ALA 2020.0320
ASP 2030.0484
MET 2040.0310
GLN 2050.0235
ALA 2060.0479
GLY 2070.0323
ILE 2080.0287
LYS 2090.0151
GLY 2100.0261
PRO 2110.0157
GLY 2120.0145
PRO 2130.0103
GLY 2140.0200
GLY 2150.0129
SER 2160.0271
ILE 2170.0172
GLN 2180.0290
VAL 2190.0267
ILE 2200.0270
ASN 2210.0712
GLY 2220.0523
SER 2230.0278
THR 2240.0209
ILE 2250.0337
GLY 2260.0255
THR 2270.0202
GLY 2280.0240
SER 2290.0236
LYS 2300.0189
LYS 2310.0199
THR 2320.0222
ILE 2330.0141
LEU 2340.0139
ILE 2350.0132
TYR 2360.0097
SER 2370.0094
ILE 2380.0089
ILE 2390.0083
GLY 2400.0081
VAL 2410.0087
LYS 2420.0084
LYS 2430.0089
GLY 2440.0096
THR 2450.0094
LEU 2460.0065
ALA 2470.0069
TRP 2480.0076
ALA 2490.0079
ARG 2500.0086
THR 2510.0310
GLY 2520.0311
PHE 2530.0363
SER 2540.0380
PRO 2550.0408
ALA 2560.0307
LYS 2570.0227
LYS 2580.0098
LEU 2590.0110
ASN 2600.0314
ALA 2610.0343
GLY 2620.0139
VAL 2630.0227
VAL 2640.0261
ARG 2650.0433
VAL 2660.0253
PHE 2670.0226
PHE 2680.0116
LEU 2690.0130
ASN 2700.0058
GLN 2710.0099
LYS 2720.0141
LYS 2730.0166
ALA 2740.0142
LYS 2750.0103
ASP 2760.0143
VAL 2770.0143
LEU 2780.0132
ARG 2790.0142
LYS 2800.0150
THR 2810.0195
SER 2820.0219
ARG 2830.0097
PRO 2840.0100
MET 2850.0191
VAL 2860.0233
ASP 2870.0250
LEU 2880.0186
THR 2890.0184
PHE 2900.0137
GLY 2910.0228
GLY 2920.0242

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.