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***  1bqud4  ***

<R2> analysis for 2609072337352378169

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0442
SER 1000.0060
GLY 1010.0059
LEU 1020.0073
PRO 1030.0137
PRO 1040.0016
GLU 1050.0059
LYS 1060.0144
PRO 1070.0098
LYS 1080.0211
ASN 1090.0410
LEU 1100.0200
SER 1110.0230
ILE 1130.0088
VAL 1140.0070
ASN 1150.0057
GLU 1160.0105
GLY 1170.0146
LYS 1180.0145
LYS 1190.0104
MET 1200.0094
ARG 1210.0056
CYS 1220.0072
GLU 1230.0117
TRP 1240.0150
ASP 1250.0233
GLY 1260.0144
GLY 1270.0114
ARG 1280.0121
GLU 1290.0111
THR 1300.0057
HIS 1310.0097
LEU 1320.0079
GLU 1330.0051
THR 1340.0072
ASN 1350.0079
PHE 1360.0063
THR 1370.0093
LEU 1380.0094
LYS 1390.0093
SER 1400.0091
GLU 1410.0122
TRP 1420.0130
ALA 1430.0315
THR 1440.0295
HIS 1450.0222
LYS 1460.0237
PHE 1470.0163
ALA 1480.0184
ASP 1490.0177
CYS 1500.0134
LYS 1510.0169
ALA 1520.0097
LYS 1530.0115
ARG 1540.0081
ASP 1550.0123
THR 1560.0116
PRO 1570.0060
THR 1580.0080
SER 1590.0025
CYS 1600.0037
THR 1610.0042
VAL 1620.0060
ASP 1630.0154
TYR 1640.0148
SER 1650.0266
THR 1660.0217
VAL 1670.0132
TYR 1680.0121
PHE 1690.0208
VAL 1700.0177
ASN 1710.0096
ILE 1720.0097
GLU 1730.0061
VAL 1740.0070
TRP 1750.0082
VAL 1760.0069
GLU 1770.0061
ALA 1780.0062
GLU 1790.0119
ASN 1800.0099
ALA 1810.0179
LEU 1820.0240
GLY 1830.0131
LYS 1840.0188
VAL 1850.0136
THR 1860.0073
SER 1870.0040
ASP 1880.0138
HIS 1890.0180
ILE 1900.0216
ASN 1910.0138
PHE 1920.0124
ASP 1930.0135
PRO 1940.0112
VAL 1950.0069
TYR 1960.0073
VAL 1980.0039
LYS 1990.0034
PRO 2000.0090
ASN 2010.0076
PRO 2020.0033
PRO 2030.0054
HIS 2040.0163
ASN 2050.0270
LEU 2060.0059
SER 2070.0133
VAL 2080.0118
ILE 2090.0126
ASN 2100.0068
SER 2110.0108
GLU 2120.0158
GLU 2130.0320
LEU 2140.0143
SER 2150.0130
SER 2160.0125
ILE 2170.0050
LEU 2180.0052
LYS 2190.0084
LEU 2200.0167
THR 2210.0163
TRP 2220.0040
THR 2230.0146
ASN 2240.0111
PRO 2250.0155
SER 2260.0155
ILE 2270.0186
LYS 2280.0184
SER 2290.0181
VAL 2300.0168
ILE 2310.0161
ILE 2320.0195
LEU 2330.0140
LYS 2340.0071
TYR 2350.0076
ASN 2360.0103
ILE 2370.0133
GLN 2380.0073
TYR 2390.0068
ARG 2400.0045
THR 2410.0062
LYS 2420.0235
ASP 2430.0399
ALA 2440.0174
SER 2450.0282
THR 2460.0254
TRP 2470.0151
SER 2480.0187
GLN 2490.0204
ILE 2500.0230
PRO 2510.0310
PRO 2520.0258
GLU 2530.0356
ASP 2540.0106
THR 2550.0079
ALA 2560.0251
SER 2570.0331
THR 2580.0189
ARG 2590.0219
SER 2600.0159
SER 2610.0222
PHE 2620.0203
THR 2630.0128
VAL 2640.0065
GLN 2650.0043
ASP 2660.0158
LEU 2670.0113
LYS 2680.0063
PRO 2690.0096
PHE 2700.0076
THR 2710.0085
GLU 2720.0182
TYR 2730.0088
VAL 2740.0041
PHE 2750.0049
ARG 2760.0102
ILE 2770.0098
ARG 2780.0092
CYS 2790.0104
MET 2800.0138
LYS 2810.0131
ASP 2830.0124
GLY 2840.0144
GLY 2860.0096
TYR 2870.0071
TRP 2880.0077
SER 2890.0067
ASP 2900.0103
TRP 2910.0089
SER 2920.0119
GLU 2930.0244
GLU 2940.0085
ALA 2950.0054
SER 2960.0063
GLY 2970.0078
ILE 2980.0177
THR 2990.0155
TYR 3000.0100
GLU 3010.0023
ASP 3020.0442
ARG 3030.0367

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.