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***  1bqud4  ***

Normal Mode Analysis for ID 2609072337352378169

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5568
mode 8 1.23 0.5455
mode 9 1.35 0.6660
mode 10 2.30 0.5707
mode 11 2.45 0.4882
mode 12 2.99 0.3960
mode 13 3.04 0.4523
mode 14 3.26 0.2268
mode 15 3.69 0.4734
mode 16 3.95 0.6165
mode 17 4.25 0.4065
mode 18 4.37 0.4294
mode 19 4.47 0.4416
mode 20 4.69 0.2797
mode 21 4.89 0.2921
mode 22 5.15 0.3637
mode 23 5.34 0.2732
mode 24 5.46 0.3724
mode 25 5.74 0.4592
mode 26 6.19 0.2143
mode 27 6.27 0.3287
mode 28 6.33 0.3626
mode 29 6.41 0.4030
mode 30 6.58 0.4140
mode 31 6.72 0.3368
mode 32 6.77 0.3345
mode 33 7.04 0.1566
mode 34 7.15 0.4449
mode 35 7.16 0.3884
mode 36 7.39 0.3353
mode 37 7.54 0.2072
mode 38 7.73 0.4249
mode 39 7.81 0.3789
mode 40 7.92 0.2442
mode 41 8.09 0.3392
mode 42 8.12 0.4006
mode 43 8.18 0.2761
mode 44 8.22 0.3152
mode 45 8.35 0.2401
mode 46 8.54 0.2388
mode 47 8.64 0.3925
mode 48 8.73 0.3248
mode 49 8.77 0.4346
mode 50 8.84 0.3110
mode 51 8.90 0.4191
mode 52 9.06 0.3600
mode 53 9.11 0.4843
mode 54 9.13 0.4981
mode 55 9.23 0.4285
mode 56 9.34 0.1669
mode 57 9.42 0.1498
mode 58 9.49 0.4071
mode 59 9.52 0.4705
mode 60 9.60 0.4243
mode 61 9.68 0.3780
mode 62 9.76 0.2287
mode 63 9.81 0.2835
mode 64 9.88 0.2921
mode 65 9.92 0.1149
mode 66 9.97 0.4710
mode 67 10.00 0.3310
mode 68 10.04 0.3967
mode 69 10.08 0.3341
mode 70 10.19 0.2783
mode 71 10.26 0.1346
mode 72 10.31 0.5314
mode 73 10.40 0.4047
mode 74 10.47 0.4601
mode 75 10.56 0.4222
mode 76 10.56 0.4957
mode 77 10.73 0.3549
mode 78 10.73 0.3832
mode 79 10.78 0.4251
mode 80 10.85 0.3487
mode 81 10.87 0.4256
mode 82 10.94 0.4452
mode 83 10.97 0.3471
mode 84 11.02 0.3190
mode 85 11.06 0.1575
mode 86 11.10 0.3231
mode 87 11.14 0.3440
mode 88 11.20 0.3305
mode 89 11.25 0.2418
mode 90 11.31 0.3362
mode 91 11.38 0.3944
mode 92 11.39 0.3887
mode 93 11.50 0.4748
mode 94 11.56 0.3637
mode 95 11.59 0.4447
mode 96 11.65 0.3418
mode 97 11.76 0.4585
mode 98 11.82 0.3172
mode 99 11.87 0.3529
mode 100 11.90 0.4693
mode 101 11.96 0.4575
mode 102 12.00 0.4067
mode 103 12.04 0.4100
mode 104 12.12 0.4481
mode 105 12.14 0.3305
mode 106 12.18 0.3391

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.