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***  Cyto C  ***

Normal Mode Analysis for ID 2609081743322622464

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6422
mode 8 1.18 0.6876
mode 9 1.48 0.7081
mode 10 1.91 0.4389
mode 11 2.11 0.4679
mode 12 2.24 0.6877
mode 13 2.42 0.5579
mode 14 2.44 0.7282
mode 15 2.74 0.4076
mode 16 2.84 0.4686
mode 17 2.90 0.3863
mode 18 2.98 0.4735
mode 19 3.14 0.4337
mode 20 3.16 0.3199
mode 21 3.29 0.4883
mode 22 3.45 0.4676
mode 23 3.53 0.5034
mode 24 3.59 0.4725
mode 25 3.68 0.4920
mode 26 3.82 0.4205
mode 27 3.85 0.4754
mode 28 3.94 0.6732
mode 29 4.00 0.5423
mode 30 4.05 0.5847
mode 31 4.06 0.3681
mode 32 4.10 0.3417
mode 33 4.13 0.2246
mode 34 4.20 0.3413
mode 35 4.27 0.3059
mode 36 4.32 0.3826
mode 37 4.40 0.5695
mode 38 4.47 0.5177
mode 39 4.48 0.5023
mode 40 4.54 0.4918
mode 41 4.55 0.4617
mode 42 4.66 0.4428
mode 43 4.69 0.4844
mode 44 4.75 0.3109
mode 45 4.78 0.4252
mode 46 4.80 0.4696
mode 47 4.85 0.3527
mode 48 4.87 0.1638
mode 49 4.94 0.1513
mode 50 5.00 0.2934
mode 51 5.03 0.4652
mode 52 5.07 0.2729
mode 53 5.15 0.4211
mode 54 5.18 0.4211
mode 55 5.20 0.2846
mode 56 5.25 0.4285
mode 57 5.29 0.5417
mode 58 5.30 0.3741
mode 59 5.35 0.3767
mode 60 5.38 0.4015
mode 61 5.39 0.4438
mode 62 5.44 0.3559
mode 63 5.47 0.4309
mode 64 5.51 0.3829
mode 65 5.55 0.4258
mode 66 5.60 0.4602
mode 67 5.66 0.3957
mode 68 5.67 0.4542
mode 69 5.72 0.3752
mode 70 5.73 0.3989
mode 71 5.78 0.5141
mode 72 5.85 0.4708
mode 73 5.87 0.3621
mode 74 5.89 0.2582
mode 75 5.94 0.5208
mode 76 5.95 0.4904
mode 77 5.97 0.3000
mode 78 6.00 0.4137
mode 79 6.03 0.5055
mode 80 6.05 0.2749
mode 81 6.07 0.3694
mode 82 6.11 0.4377
mode 83 6.13 0.2909
mode 84 6.16 0.4896
mode 85 6.21 0.3529
mode 86 6.22 0.3746
mode 87 6.27 0.3956
mode 88 6.28 0.3141
mode 89 6.31 0.4159
mode 90 6.32 0.3577
mode 91 6.36 0.2296
mode 92 6.39 0.3135
mode 93 6.41 0.3636
mode 94 6.42 0.2829
mode 95 6.46 0.3458
mode 96 6.49 0.4135
mode 97 6.51 0.4251
mode 98 6.53 0.3761
mode 99 6.57 0.4032
mode 100 6.58 0.4112
mode 101 6.59 0.3155
mode 102 6.62 0.4059
mode 103 6.64 0.2094
mode 104 6.66 0.1577
mode 105 6.67 0.2872
mode 106 6.69 0.3324

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.