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***  Cyto C  ***

B-factor analysis for ID 2609081743322622464

Overall B-factor prediction

Correlation= 0.314 for 124 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   PHE      2      0.1229     28.5141     15.9900
    13 CA   ALA      3      0.2776     55.2882     20.5000
    18 CA   LYS      4      0.1268     29.1770     23.0000
    25 CA   PRO      5      0.0520     16.2217     21.2900
    32 CA   GLU      6      0.0617     17.9164     21.7900
    41 CA   ASP      7      0.0523     16.2825     12.1800
    49 CA   ALA      8      0.0236     11.3121     12.7300
    54 CA   VAL      9      0.0219     11.0199     10.7900
    61 CA   LYS     10      0.0439     14.8306      7.9300
    68 CA   TYR     11      0.0293     12.2982     11.4000
    80 CA   ARG     12      0.0192     10.5553      8.6400
    91 CA   GLN     13      0.0365     13.5370     12.0100
   100 CA   SER     14      0.0475     15.4527     12.2900
   106 CA   ALA     15      0.0274     11.9737     10.2200
   111 CA   LEU     16      0.0268     11.8683     10.9100
   119 CA   THR     17      0.0537     16.5213      8.7500
   126 CA   LEU     18      0.0353     13.3388     10.9400
   134 CA   MET     19      0.0222     11.0662     14.3100
   142 CA   ALA     20      0.0452     15.0480     10.6000
   147 CA   SER     21      0.0431     14.6907     10.7700
   153 CA   HIS     22      0.0246     11.4774     10.9100
   163 CA   PHE     23      0.0219     11.0200     13.8100
   174 CA   GLY     24      0.0402     14.1866      8.0200
   178 CA   ARG     25      0.0413     14.3820     17.8200
   189 CA   MET     26      0.0224     11.0945      6.9400
   197 CA   THR     27      0.0407     14.2704     13.2200
   204 CA   PRO     28      0.0608     17.7518     16.3300
   211 CA   VAL     29      0.0330     12.9456     10.2900
   218 CA   VAL     30      0.0283     12.1243     18.8100
   225 CA   LYS     31      0.0798     21.0397     14.6300
   232 CA   GLY     32      0.0850     21.9419     12.3700
   236 CA   GLN     33      0.1385     31.2094     13.1100
   245 CA   ALA     34      0.1155     27.2251      6.5300
   250 CA   PRO     35      0.1264     29.1204      8.5200
   257 CA   TYR     36      0.0464     15.2540      9.0600
   269 CA   ASP     37      0.0634     18.2068     11.0300
   277 CA   ALA     38      0.0408     14.2915     12.3600
   282 CA   ALA     39      0.0876     22.4017     12.4500
   287 CA   GLN     40      0.0534     16.4691     17.5100
   296 CA   ILE     41      0.0217     10.9773      8.6000
   304 CA   LYS     42      0.0275     11.9817     11.4000
   311 CA   ALA     43      0.0622     18.0028     16.5700
   316 CA   ASN     44      0.0253     11.6088      5.5300
   324 CA   VAL     45      0.0177     10.2836     10.7300
   331 CA   GLU     46      0.0386     13.9075     14.9100
   336 CA   VAL     47      0.0307     12.5322     18.4300
   343 CA   LEU     48      0.0182     10.3778     15.2000
   351 CA   LYS     49      0.0223     11.0776     14.9200
   358 CA   THR     50      0.0412     14.3497     20.4600
   365 CA   LEU     51      0.0229     11.1943     18.4000
   373 CA   THR     52      0.0194     10.5772     10.5100
   380 CA   ALA     53      0.0232     11.2328     10.0100
   385 CA   LEU     54      0.0241     11.4024     10.4200
   393 CA   PRO     55      0.0163     10.0467     10.5400
   400 CA   TRP     56      0.0169     10.1441      8.7900
   414 CA   ALA     57      0.0310     12.5900     14.0900
   419 CA   ALA     58      0.0170     10.1606     12.1100
   424 CA   PHE     59      0.0146      9.7508     11.6100
   435 CA   GLY     60      0.0961     23.8673     21.0700
   439 CA   PRO     61      0.1066     25.6801     26.9400
   446 CA   GLY     62      0.0948     23.6455     31.7200
   450 CA   THR     63      0.0255     11.6337     14.6300
   457 CA   GLU     64      0.0298     12.3788      9.0700
   466 CA   GLY     65      0.0343     13.1609     10.4900
   470 CA   GLY     66      0.0546     16.6817     18.6900
   474 CA   ASP     67      0.0574     17.1628      7.7800
   482 CA   ALA     68      0.0277     12.0201     12.9600
   487 CA   ARG     69      0.0314     12.6621      9.0200
   498 CA   PRO     70      0.0355     13.3644     18.3200
   505 CA   GLU     71      0.0334     13.0133     15.2000
   514 CA   ILE     72      0.0184     10.4125     11.8100
   522 CA   TRP     73      0.0336     13.0406     14.7100
   536 CA   SER     74      0.0749     20.1853     26.4000
   542 CA   ASP     75      0.0551     16.7598     20.9400
   550 CA   ALA     76      0.0481     15.5543     32.7400
   555 CA   ALA     77      0.1043     25.2788     28.7500
   560 CA   SER     78      0.0478     15.5031     24.7100
   566 CA   PHE     79      0.0206     10.7879     21.5500
   577 CA   LYS     80      0.0346     13.2157     28.0300
   584 CA   GLN     81      0.0513     16.1061     19.2300
   589 CA   LYS     82      0.0229     11.1899     14.6600
   598 CA   GLN     83      0.0212     10.8980     24.0400
   607 CA   GLN     84      0.0378     13.7708     14.5500
   612 CA   ALA     85      0.0324     12.8368     14.4500
   617 CA   PHE     86      0.0187     10.4622     11.5500
   628 CA   GLN     87      0.0207     10.8010      9.8800
   637 CA   ASP     88      0.0332     12.9666     13.4500
   645 CA   ASN     89      0.0220     11.0364      7.3300
   653 CA   ILE     90      0.0173     10.2251     13.0800
   661 CA   VAL     91      0.0330     12.9360     12.1600
   668 CA   LYS     92      0.0260     11.7185     17.5200
   677 CA   LEU     93      0.0146      9.7459     13.2500
   685 CA   SER     94      0.0230     11.2077     12.6600
   691 CA   ALA     95      0.0472     15.4047     15.2100
   696 CA   ALA     96      0.0230     11.2092     14.0000
   701 CA   ALA     97      0.0188     10.4773     12.2400
   706 CA   ASP     98      0.0537     16.5175     22.0300
   714 CA   ALA     99      0.0746     20.1351     19.4300
   719 CA   GLY    100      0.0396     14.0784     14.1100
   723 CA   ASP    101      0.0472     15.3974     23.3600
   731 CA   LEU    102      0.0313     12.6437     25.1100
   739 CA   ASP    103      0.0563     16.9697     21.5400
   747 CA   LYS    104      0.0378     13.7626     22.5700
   754 CA   LEU    105      0.0166     10.0984      9.8800
   762 CA   ARG    106      0.0294     12.3199     15.4000
   773 CA   ALA    107      0.0400     14.1569     13.4500
   778 CA   ALA    108      0.0214     10.9252     19.4400
   783 CA   PHE    109      0.0193     10.5573     13.3000
   794 CA   GLY    110      0.0357     13.4022     10.2700
   798 CA   ASP    111      0.0312     12.6336     13.1200
   806 CA   VAL    112      0.0197     10.6345     11.7200
   813 CA   GLY    113      0.0408     14.2855      8.5500
   817 CA   ALA    114      0.0760     20.3899     13.8200
   822 CA   SER    115      0.0324     12.8351      9.6300
   828 CA   CYS    116      0.0349     13.2656      8.2000
   834 CA   LYS    117      0.0579     17.2528     16.3700
   841 CA   ALA    118      0.0433     14.7205     13.8200
   846 CA   CYS    119      0.0274     11.9733     16.6700
   852 CA   HIS    120      0.0415     14.4025     13.2700
   862 CA   ASP    121      0.0575     17.1795     22.7000
   870 CA   ALA    122      0.0369     13.6209     16.9600
   875 CA   TYR    123      0.0261     11.7483      9.6600
   887 CA   ARG    124      0.0468     15.3255     16.1100
   898 CA   LYS    125      0.0735     19.9542     36.4400

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.