Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* vps4b *

CA strain for 2609092319512946827

--- normal mode 10 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ALA 123 ILE 124 0.0001

ILE 124 VAL 125 0.0052

VAL 125 ILE 126 0.0002

ILE 126 GLU 127 0.0065

GLU 127 ARG 128 0.0000

ARG 128 PRO 129 0.0162

PRO 129 ASN 130 0.0002

ASN 130 VAL 131 0.0184

VAL 131 LYS 132 -0.0000

LYS 132 TRP 133 -0.0052

TRP 133 SER 134 0.0001

SER 134 ASP 135 0.0083

ASP 135 VAL 136 -0.0001

VAL 136 ALA 137 0.1821

ALA 137 GLY 138 -0.0003

GLY 138 LEU 139 0.0087

LEU 139 GLU 140 -0.0000

GLU 140 GLY 141 0.0077

GLY 141 ALA 142 0.0001

ALA 142 LYS 143 -0.0052

LYS 143 GLU 144 -0.0003

GLU 144 ALA 145 0.0148

ALA 145 LEU 146 -0.0004

LEU 146 LYS 147 0.0043

LYS 147 GLU 148 0.0001

GLU 148 ALA 149 -0.0030

ALA 149 VAL 150 0.0001

VAL 150 ILE 151 0.0025

ILE 151 LEU 152 0.0001

LEU 152 PRO 153 0.0102

PRO 153 ILE 154 0.0001

ILE 154 LYS 155 -0.0104

LYS 155 PHE 156 -0.0002

PHE 156 PRO 157 -0.0022

PRO 157 HIS 158 0.0004

HIS 158 LEU 159 0.0001

LEU 159 PHE 160 -0.0000

PHE 160 THR 161 -0.0032

THR 161 GLY 162 0.0000

GLY 162 LYS 163 0.0111

LYS 163 ARG 164 0.0001

ARG 164 THR 165 0.0090

THR 165 PRO 166 0.0000

PRO 166 TRP 167 -0.0076

TRP 167 ARG 168 0.0001

ARG 168 GLY 169 0.0059

GLY 169 ILE 170 0.0003

ILE 170 LEU 171 0.0047

LEU 171 LEU 172 -0.0001

LEU 172 PHE 173 0.0003

PHE 173 GLY 174 -0.0002

GLY 174 PRO 175 -0.0023

PRO 175 PRO 176 0.0002

PRO 176 GLY 177 0.0564

GLY 177 THR 178 0.0000

THR 178 GLY 179 0.0954

GLY 179 LYS 180 0.0003

LYS 180 SER 181 0.0301

SER 181 TYR 182 0.0001

TYR 182 LEU 183 -0.0001

LEU 183 ALA 184 -0.0001

ALA 184 LYS 185 -0.0056

LYS 185 ALA 186 0.0004

ALA 186 VAL 187 0.0165

VAL 187 ALA 188 -0.0002

ALA 188 THR 189 -0.0060

THR 189 GLU 190 -0.0003

GLU 190 ALA 191 0.0059

ALA 191 ASN 192 -0.0002

ASN 192 ASN 193 0.0017

ASN 193 SER 194 0.0001

SER 194 THR 195 -0.0099

THR 195 PHE 196 0.0000

PHE 196 PHE 197 0.0026

PHE 197 SER 198 0.0001

SER 198 ILE 199 -0.0150

ILE 199 SER 200 0.0001

SER 200 SER 201 -0.0150

SER 201 SER 202 0.0000

SER 202 ASP 203 -0.0202

ASP 203 LEU 204 0.0000

LEU 204 VAL 205 0.0006

VAL 205 SER 206 -0.0003

SER 206 LYS 207 0.0072

LYS 207 TRP 208 0.0001

TRP 208 LEU 209 -0.0220

LEU 209 GLY 210 0.0001

GLY 210 GLU 211 0.0025

GLU 211 SER 212 0.0000

SER 212 GLU 213 -0.0147

GLU 213 LYS 214 -0.0002

LYS 214 LEU 215 0.0174

LEU 215 VAL 216 0.0002

VAL 216 LYS 217 0.0014

LYS 217 ASN 218 0.0000

ASN 218 LEU 219 0.0131

LEU 219 PHE 220 -0.0002

PHE 220 GLN 221 0.0038

GLN 221 LEU 222 0.0003

LEU 222 ALA 223 -0.0011

ALA 223 ARG 224 -0.0001

ARG 224 GLU 225 0.0001

GLU 225 ASN 226 -0.0002

ASN 226 LYS 227 -0.0069

LYS 227 PRO 228 0.0003

PRO 228 SER 229 -0.0033

SER 229 ILE 230 0.0003

ILE 230 ILE 231 -0.0030

ILE 231 PHE 232 -0.0000

PHE 232 ILE 233 -0.0086

ILE 233 ASP 234 0.0002

ASP 234 GLU 235 -0.0014

GLU 235 ILE 236 -0.0002

ILE 236 ASP 237 -0.0068

ASP 237 SER 238 0.0003

SER 238 LEU 239 0.0261

LEU 239 CYS 240 -0.0002

CYS 240 GLY 241 -0.0063

GLY 241 SER 242 0.0003

SER 242 ARG 243 -0.0093

ARG 243 SER 244 0.0002

SER 244 GLU 245 0.0119

GLU 245 ASN 246 -0.0003

ASN 246 GLU 247 0.0029

GLU 247 SER 248 0.0001

SER 248 GLU 249 0.0002

GLU 249 ALA 250 -0.0001

ALA 250 ALA 251 0.0090

ALA 251 ARG 252 0.0001

ARG 252 ARG 253 0.0012

ARG 253 ILE 254 0.0000

ILE 254 LYS 255 -0.0089

LYS 255 THR 256 -0.0003

THR 256 GLU 257 0.0032

GLU 257 PHE 258 -0.0001

PHE 258 LEU 259 -0.0037

LEU 259 VAL 260 0.0001

VAL 260 GLN 261 0.0021

GLN 261 MET 262 -0.0003

MET 262 GLN 263 0.0039

GLN 263 GLY 264 -0.0002

GLY 264 VAL 265 -0.0029

VAL 265 GLY 266 -0.0001

GLY 266 VAL 267 0.0056

VAL 267 ASP 268 0.0001

ASP 268 ASN 269 0.0015

ASN 269 ASP 270 0.0001

ASP 270 GLY 271 0.0028

GLY 271 ILE 272 0.0001

ILE 272 LEU 273 -0.0080

LEU 273 VAL 274 0.0000

VAL 274 LEU 275 0.0170

LEU 275 GLY 276 -0.0000

GLY 276 ALA 277 0.0269

ALA 277 THR 278 0.0001

THR 278 ASN 279 0.0341

ASN 279 ILE 280 -0.0002

ILE 280 PRO 281 0.0213

PRO 281 TRP 282 -0.0002

TRP 282 VAL 283 -0.0068

VAL 283 LEU 284 0.0000

LEU 284 ASP 285 0.0119

ASP 285 SER 286 -0.0000

SER 286 ALA 287 -0.0073

ALA 287 ILE 288 -0.0001

ILE 288 ARG 289 -0.0113

ARG 289 ARG 290 -0.0002

ARG 290 ARG 291 -0.0182

ARG 291 PHE 292 -0.0002

PHE 292 GLU 293 -0.0001

GLU 293 LYS 294 -0.0001

LYS 294 ARG 295 -0.0236

ARG 295 ILE 296 -0.0005

ILE 296 TYR 297 -0.0562

TYR 297 ILE 298 -0.0003

ILE 298 PRO 299 -0.0794

PRO 299 LEU 300 -0.0001

LEU 300 PRO 301 0.0518

PRO 301 GLU 302 0.0000

GLU 302 PRO 303 -0.0090

PRO 303 HIS 304 0.0002

HIS 304 ALA 305 0.0191

ALA 305 ARG 306 0.0002

ARG 306 ALA 307 0.0319

ALA 307 ALA 308 -0.0001

ALA 308 MET 309 0.0046

MET 309 PHE 310 0.0003

PHE 310 LYS 311 -0.0062

LYS 311 LEU 312 0.0001

LEU 312 HIS 313 0.0189

HIS 313 LEU 314 0.0002

LEU 314 GLY 315 0.0108

GLY 315 THR 316 0.0002

THR 316 THR 317 -0.0096

THR 317 GLN 318 0.0001

GLN 318 ASN 319 -0.0817

ASN 319 SER 320 -0.0004

SER 320 LEU 321 0.0427

LEU 321 THR 322 -0.0001

THR 322 GLU 323 0.0178

GLU 323 ALA 324 0.0001

ALA 324 ASP 325 0.0035

ASP 325 PHE 326 0.0004

PHE 326 ARG 327 -0.0040

ARG 327 GLU 328 0.0000

GLU 328 LEU 329 0.0007

LEU 329 GLY 330 0.0001

GLY 330 ARG 331 0.0027

ARG 331 LYS 332 0.0001

LYS 332 THR 333 0.0083

THR 333 ASP 334 -0.0000

ASP 334 GLY 335 0.0080

GLY 335 TYR 336 -0.0001

TYR 336 SER 337 0.0682

SER 337 GLY 338 -0.0003

GLY 338 ALA 339 -0.0615

ALA 339 ASP 340 0.0003

ASP 340 ILE 341 -0.0164

ILE 341 SER 342 0.0001

SER 342 ILE 343 -0.0047

ILE 343 ILE 344 0.0000

ILE 344 VAL 345 -0.0200

VAL 345 ARG 346 0.0002

ARG 346 ASP 347 0.0124

ASP 347 ALA 348 -0.0003

ALA 348 LEU 349 -0.0009

LEU 349 MET 350 0.0002

MET 350 GLN 351 0.0351

GLN 351 PRO 352 -0.0002

PRO 352 VAL 353 0.0581

VAL 353 ARG 354 0.0000

ARG 354 LYS 355 -0.0241

LYS 355 VAL 356 -0.0001

VAL 356 GLN 357 0.1357

GLN 357 SER 358 0.0002

SER 358 ALA 359 -0.0393

ALA 359 THR 360 0.0002

THR 360 HIS 361 -0.0157

HIS 361 PHE 362 0.0002

PHE 362 LYS 363 -0.0428

LYS 363 LYS 364 -0.0002

LYS 364 VAL 365 -0.0325

VAL 365 ARG 366 0.0000

ARG 366 GLY 367 -0.0169

GLY 367 PRO 368 0.0002

PRO 368 SER 369 -0.0035

SER 369 ARG 370 0.0001

ARG 370 ALA 371 -0.0167

ALA 371 ASP 372 0.0001

ASP 372 PRO 373 -0.0069

PRO 373 ASN 374 -0.0001

ASN 374 HIS 375 -0.0016

HIS 375 LEU 376 -0.0001

LEU 376 VAL 377 -0.0075

VAL 377 ASP 378 0.0002

ASP 378 ASP 379 -0.0234

ASP 379 LEU 380 -0.0001

LEU 380 LEU 381 -0.0050

LEU 381 THR 382 0.0000

THR 382 PRO 383 0.0108

PRO 383 CYS 384 0.0002

CYS 384 SER 385 0.0086

SER 385 PRO 386 -0.0002

PRO 386 GLY 387 -0.0055

GLY 387 ASP 388 0.0004

ASP 388 PRO 389 0.0110

PRO 389 GLY 390 -0.0002

GLY 390 ALA 391 -0.0056

ALA 391 ILE 392 0.0000

ILE 392 GLU 393 -0.0262

GLU 393 MET 394 0.0002

MET 394 THR 395 -0.0667

THR 395 TRP 396 -0.0003

TRP 396 MET 397 0.0026

MET 397 ASP 398 0.0001

ASP 398 VAL 399 0.0128

VAL 399 PRO 400 0.0001

PRO 400 GLY 401 0.0159

GLY 401 ASP 402 0.0001

ASP 402 LYS 403 -0.0021

LYS 403 LEU 404 0.0002

LEU 404 LEU 405 0.0451

LEU 405 GLU 406 -0.0002

GLU 406 PRO 407 0.1916

PRO 407 VAL 408 0.0000

VAL 408 VAL 409 0.0771

VAL 409 SER 410 -0.0001

SER 410 MET 411 0.0820

MET 411 SER 412 -0.0000

SER 412 ASP 413 0.0071

ASP 413 MET 414 0.0003

MET 414 LEU 415 0.0023

LEU 415 ARG 416 -0.0003

ARG 416 SER 417 0.0091

SER 417 LEU 418 0.0001

LEU 418 SER 419 -0.0078

SER 419 ASN 420 0.0001

ASN 420 THR 421 -0.0064

THR 421 LYS 422 -0.0002

LYS 422 PRO 423 -0.0239

PRO 423 THR 424 0.0000

THR 424 VAL 425 -0.0593

VAL 425 ASN 426 0.0002

ASN 426 GLU 427 -0.0669

GLU 427 HIS 428 0.0001

HIS 428 ASP 429 0.0184

ASP 429 LEU 430 -0.0001

LEU 430 LEU 431 -0.0041

LEU 431 LYS 432 0.0003

LYS 432 LEU 433 0.0139

LEU 433 LYS 434 -0.0003

LYS 434 LYS 435 0.0134

LYS 435 PHE 436 0.0002

PHE 436 THR 437 0.0059

THR 437 GLU 438 0.0001

GLU 438 ASP 439 -0.0037

ASP 439 PHE 440 -0.0001

PHE 440 GLY 441 0.0137

GLY 441 GLN 442 -0.0002

GLN 442 GLU 443 -0.0070

GLU 443 GLY 444 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** vps4b ***

CA strain for 2609092319512946827

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* vps4b *